Map3k15 (mitogen-activated protein kinase kinase kinase 15) - Rat Genome Database

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Gene: Map3k15 (mitogen-activated protein kinase kinase kinase 15) Mus musculus
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Symbol: Map3k15
Name: mitogen-activated protein kinase kinase kinase 15
RGD ID: 1612412
MGI Page MGI
Description: Predicted to enable MAP kinase kinase kinase activity. Predicted to be involved in JNK cascade and p38MAPK cascade. Is expressed in pancreas. Orthologous to human MAP3K15 (mitogen-activated protein kinase kinase kinase 15).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC031147; MAPK/ERK kinase kinase 15; MEK kinase 15; MEKK 15; MEKK15
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X158,771,200 - 158,906,342 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX158,771,429 - 158,906,347 (+)EnsemblGRCm39 Ensembl
GRCm38X159,988,204 - 160,123,346 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX159,988,433 - 160,123,351 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X156,426,365 - 156,561,283 (+)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX143,246,363 - 143,367,779 (+)NCBICelera
Cytogenetic MapXF4NCBI
cM MapX73.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:18855897   PMID:21267068   PMID:21677750   PMID:21873635   PMID:23250415   PMID:24336151   PMID:27708103   PMID:29555767   PMID:32325033   PMID:33431691  


Genomics

Comparative Map Data
Map3k15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X158,771,200 - 158,906,342 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX158,771,429 - 158,906,347 (+)EnsemblGRCm39 Ensembl
GRCm38X159,988,204 - 160,123,346 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX159,988,433 - 160,123,351 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X156,426,365 - 156,561,283 (+)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX143,246,363 - 143,367,779 (+)NCBICelera
Cytogenetic MapXF4NCBI
cM MapX73.95NCBI
MAP3K15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X19,360,059 - 19,515,508 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX19,360,056 - 19,515,508 (-)EnsemblGRCh38hg38GRCh38
GRCh37X19,378,177 - 19,533,626 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X19,288,095 - 19,410,315 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X19,137,830 - 19,260,051NCBI
CeleraX23,499,514 - 23,656,927 (-)NCBICelera
Cytogenetic MapXp22.12NCBI
HuRefX17,127,352 - 17,281,966 (-)NCBIHuRef
CHM1_1X19,409,233 - 19,563,759 (-)NCBICHM1_1
T2T-CHM13v2.0X18,942,795 - 19,098,393 (-)NCBIT2T-CHM13v2.0
Map3k15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X38,522,143 - 38,667,746 (-)NCBIGRCr8
mRatBN7.2X34,713,150 - 34,859,054 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX34,713,175 - 34,858,807 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X37,342,251 - 37,755,373 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX37,643,169 - 37,705,263 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0X37,654,122 - 38,059,872 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X55,912,157 - 56,042,817 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX35,385,725 - 35,526,200 (-)NCBICelera
Cytogenetic MapXq14NCBI
Map3k15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555865,345 - 99,534 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555865,856 - 99,662 (+)NCBIChiLan1.0ChiLan1.0
MAP3K15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X21,160,443 - 21,315,845 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X21,163,833 - 21,319,232 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X11,984,867 - 12,137,090 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X19,346,814 - 19,518,249 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX19,346,814 - 19,518,249 (-)Ensemblpanpan1.1panPan2
MAP3K15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X15,353,081 - 15,465,862 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX15,353,081 - 15,465,992 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X15,301,710 - 15,425,913 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX15,312,525 - 15,426,249 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X15,362,476 - 15,474,546 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X15,364,256 - 15,476,439 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X15,419,523 - 15,543,818 (-)NCBIUU_Cfam_GSD_1.0
Map3k15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X8,417,779 - 8,469,243 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936844905,658 - 956,879 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936844905,249 - 958,946 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP3K15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX15,715,991 - 15,867,120 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X15,716,898 - 15,867,377 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X16,964,353 - 17,118,068 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP3K15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X17,820,316 - 17,981,894 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX17,819,474 - 17,981,402 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605619,688,358 - 19,839,732 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map3k15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248294,169,717 - 4,318,578 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248294,169,679 - 4,318,966 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Map3k15
2942 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:138
Count of miRNA genes:129
Interacting mature miRNAs:134
Transcripts:ENSMUST00000033665
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10401118Pgia39_mproteoglycan induced arthritis 39 (mouse)Not determinedX144474380169476592Mouse
1558900Bw3_mbody weight QTL 3 (mouse)Not determinedX133540040165298595Mouse
1302000Pgia25_mproteoglycan induced arthritis 2 (mouse)Not determinedX144474380169476592Mouse
12738421Lfibq17_mliver fibrosis QTL 17 (mouse)X148148453164945064Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX120993165160213038Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX125685149159685269Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000033665   ⟹   ENSMUSP00000033665
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX158,771,429 - 158,906,347 (+)Ensembl
GRCm38.p6 EnsemblX159,988,433 - 160,123,351 (+)Ensembl
RefSeq Acc Id: NM_001163085   ⟹   NP_001156557
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,771,200 - 158,906,342 (+)NCBI
GRCm38X159,988,204 - 160,123,346 (+)NCBI
MGSCv37X156,426,365 - 156,561,283 (+)RGD
CeleraX143,246,364 - 143,367,779 (+)ENTREZGENE
cM MapX ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001156557 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A2AQW0 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000033665
  ENSMUSP00000033665.9
RefSeq Acc Id: NP_001156557   ⟸   NM_001163085
- UniProtKB: A2AQW0 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000033665   ⟸   ENSMUST00000033665
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2AQW0-F1-model_v2 AlphaFold A2AQW0 1-1331 view protein structure

Promoters
RGD ID:13681740
Promoter ID:EPDNEW_M25019
Type:multiple initiation site
Name:Map3k15_1
Description:Mus musculus mitogen-activated protein kinase kinase kinase 15, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X159,988,438 - 159,988,498EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2448588 AgrOrtholog
Ensembl Genes ENSMUSG00000031303 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000033665 ENTREZGENE
  ENSMUST00000033665.9 UniProtKB/Swiss-Prot
Gene3D-CATH Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro DRHyd-ASK UniProtKB/Swiss-Prot
  DUF4071 UniProtKB/Swiss-Prot
  HisK-N-like UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  MAP3K_PH UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
  SAM/pointed_sf UniProtKB/Swiss-Prot
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot
KEGG Report mmu:270672 UniProtKB/Swiss-Prot
MGD MGI:2448588 ENTREZGENE
NCBI Gene 270672 ENTREZGENE
PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 UniProtKB/Swiss-Prot
  SERINE/THREONINE PROTEIN KINASE UniProtKB/Swiss-Prot
Pfam ASK_PH UniProtKB/Swiss-Prot
  DRHyd-ASK UniProtKB/Swiss-Prot
  DUF4071 UniProtKB/Swiss-Prot
  HisK-N-like UniProtKB/Swiss-Prot
  Pkinase UniProtKB/Swiss-Prot
PhenoGen Map3k15 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot
SMART S_TKc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot
  SSF56112 UniProtKB/Swiss-Prot
UniProt A2AQW0 ENTREZGENE, UniProtKB/Swiss-Prot