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Gene: Hccs (holocytochrome c synthase) Rattus norvegicus
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Symbol: Hccs
Name: holocytochrome c synthase
Description: Predicted to have holocytochrome-c synthase activity. Predicted to be involved in cytochrome c-heme linkage. Predicted to localize to the mitochondrion. Human ortholog(s) of this gene implicated in microphthalmia. Orthologous to human HCCS (holocytochrome c synthase); PARTICIPATES IN porphyrin and chlorophyll metabolic pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: holocytochrome c synthetase; LOC317444; RGD1563855; similar to Hccs protein
Orthologs:
Homo sapiens (human) : HCCS (holocytochrome c synthase)  HGNC  Alliance
Mus musculus (house mouse) : Hccs (holocytochrome c synthetase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102006165 (cytochrome c-type heme lyase)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100982890 (cytochrome c-type heme lyase)
Canis lupus familiaris (dog) : HCCS (holocytochrome c synthase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101978619 (cytochrome c-type heme lyase)
Sus scrofa (pig) : LOC100524598 (cytochrome c-type heme lyase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X26,294,028 - 26,303,461 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX26,294,066 - 26,303,461 (+)Ensembl
Rnor_5.0X26,698,830 - 26,708,253 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X45,617,395 - 45,626,790 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX25,352,867 - 25,362,262 (+)NCBICelera
Cytogenetic MapXq13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hccs
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563855
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.