Phex (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 41,422,561 - 41,671,226 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 37,607,553 - 37,856,183 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 37,610,760 - 37,854,469 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 38,808,427 - 39,046,002 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 42,275,631 - 42,513,220 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 39,960,325 - 40,197,897 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 40,460,047 - 40,717,982 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 40,460,047 - 40,717,982 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 40,772,810 - 41,031,710 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 58,911,144 - 59,168,857 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | X | 58,964,612 - 59,222,310 (+) | NCBI | | | | | Celera | X | 38,233,227 - 38,472,933 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q21 | NCBI | | | | |
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PHEX (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 22,032,325 - 22,251,310 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 22,032,325 - 22,494,713 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 22,050,443 - 22,269,427 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 21,960,842 - 22,176,399 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 21,810,215 - 22,025,985 | NCBI | | | | | Celera | X | 26,171,770 - 26,387,304 (+) | NCBI | | Celera | | | Cytogenetic Map | X | p22.11 | NCBI | | | | | HuRef | X | 19,791,354 - 20,006,299 (+) | NCBI | | HuRef | | | CHM1_1 | X | 22,081,373 - 22,297,157 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 21,615,666 - 21,834,723 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Phex (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 155,945,071 - 156,198,282 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 155,945,071 - 156,198,308 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 157,162,075 - 157,415,286 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 157,162,075 - 157,415,312 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 153,596,618 - 153,853,218 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 152,502,794 - 152,759,383 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 140,419,752 - 140,667,816 (-) | NCBI | | Celera | | | Cytogenetic Map | X | F4 | NCBI | | | | | cM Map | X | 72.38 | NCBI | | | | |
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Phex (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955509 | 2,357,263 - 2,546,802 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955509 | 2,357,263 - 2,546,802 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PHEX (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 23,841,047 - 24,060,334 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 23,844,437 - 24,063,724 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 14,663,847 - 14,859,294 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 22,017,678 - 22,235,560 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 22,017,681 - 22,232,501 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PHEX (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 17,830,714 - 18,038,755 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 17,829,158 - 18,035,775 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | ROS_Cfam_1.0 | X | 17,788,714 - 17,997,786 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 17,788,830 - 17,994,811 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 17,822,506 - 18,032,213 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 17,844,194 - 18,054,186 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 17,904,817 - 18,114,749 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Phex (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | X | 10,843,339 - 11,033,426 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936624 | 2,126,253 - 2,312,847 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936624 | 2,124,479 - 2,312,847 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PHEX (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | X | 18,203,174 - 18,418,004 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 18,199,396 - 18,420,985 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 19,362,855 - 19,605,399 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PHEX (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | X | 20,507,619 - 20,733,367 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 20,522,498 - 20,734,599 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666056 | 22,362,964 - 22,589,561 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Phex (Heterocephalus glaber - naked mole-rat) |
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