LOC120099444 (small nucleolar RNA SNORA70) - Rat Genome Database

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Gene: LOC120099444 (small nucleolar RNA SNORA70) Rattus norvegicus
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Symbol: LOC120099444
Name: small nucleolar RNA SNORA70
RGD ID: 41131627
Description:
Type: pseudo (Ensembl: snoRNA)
RefSeq Status: MODEL
Previously known as: SNORA70
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X30,611,379 - 30,611,496 (+)NCBIGRCr8
mRatBN7.2X26,994,456 - 26,994,573 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX26,994,456 - 26,994,573 (+)EnsemblmRatBN7.2 Ensembl
Cytogenetic MapXq13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2447036044931007Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X400149344939387Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2447036045082063Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X197044046970440Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X811148653111486Rat


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000095024
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX26,994,456 - 26,994,573 (+)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2662 BioCyc
Ensembl Genes ENSRNOG00000070348 Ensembl
NCBI Gene LOC120099444 ENTREZGENE
PhenoGen LOC120099444 PhenoGen
RatGTEx ENSRNOG00000070348 RatGTEx
RNAcentral URS00006647A1 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-26 LOC120099444  small nucleolar RNA SNORA70  SNORA70  Small nucleolar RNA SNORA70  Data merged from RGD:150343060 737654 PROVISIONAL
2021-08-31 SNORA70  Small nucleolar RNA SNORA70      Symbol and Name status set to provisional 45752 PROVISIONAL
2021-01-27 LOC120099444  small nucleolar RNA SNORA70      Symbol and Name status set to provisional 70820 PROVISIONAL