Gene: Clcn4 (chloride voltage-gated channel 4) Rattus norvegicus
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Symbol: Clcn4
Name: chloride voltage-gated channel 4
Description: ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Mental Retardation, X-Linked 49 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: chloride channel 4; chloride channel 4-2; chloride channel protein 4; chloride channel, voltage-sensitive 4; chloride transporter ClC-4; clC-4; Clcn4-2; h(+)/Cl(-) exchange transporter 4; MGC105433; putative chloride channel (similar to Mm Clcn4-2); putative chloride channel 4-2
Orthologs:
Homo sapiens (human) : CLCN4 (chloride voltage-gated channel 4)  HGNC  Alliance
Mus musculus (house mouse) : Clcn4 (chloride channel, voltage-sensitive 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clcn4 (chloride voltage-gated channel 4)
Pan paniscus (bonobo/pygmy chimpanzee) : CLCN4 (chloride voltage-gated channel 4)
Canis lupus familiaris (dog) : CLCN4 (chloride voltage-gated channel 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcn4 (chloride voltage-gated channel 4)
Sus scrofa (pig) : CLCN4 (chloride voltage-gated channel 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X25,016,177 - 25,082,563 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X25,427,399 - 25,493,756 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X44,355,648 - 44,419,524 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X44,436,114 - 44,471,196 (+)NCBI
CeleraX24,157,917 - 24,221,792 (+)NCBICelera
Cytogenetic MapXq13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clcn4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 708381
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE