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ONTOLOGY REPORT - ANNOTATIONS

Term:glycogen metabolic process
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Accession:GO:0005977 term browser browse the term
Definition:The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages.
Synonyms:exact_synonym: glycogen metabolism


show annotations for term's descendants           Sort by:
glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agl amylo-1,6-glucosidase, 4-alpha-glucanotransferase acts_upstream_of_or_within IDA (PMID:11785984) MGI PMID:11785984 NCBI chr 3:116,533,648...116,601,815
Ensembl chr 3:116,533,648...116,601,815 		JBrowse link
G Akt1 thymoma viral proto-oncogene 1 acts_upstream_of_or_within IMP (PMID:12783884) MGI PMID:12783884 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G Comt catechol-O-methyltransferase acts_upstream_of_or_within IGI (PMID:30179860) MGI PMID:30179860 NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602 		JBrowse link
G Epm2a epilepsy, progressive myoclonic epilepsy, type 2 gene alpha involved_in
acts_upstream_of_or_within		 ISO
IGI
IMP		 (PMID:28973665)
(PMID:21552327)
(PMID:18852261)
(PMID:23663739), (PMID:24914213), (PMID:25416783)		 MGI PMID:18852261 PMID:21552327 PMID:23663739 PMID:24914213 PMID:25416783 More... GO_REF:0000119 MGI:4834177 NCBI chr10:11,218,435...11,335,408
Ensembl chr10:11,219,148...11,335,388 		JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within IMP (PMID:8640227) MGI PMID:8640227 NCBI chr11:101,258,542...101,268,729
Ensembl chr11:101,258,387...101,268,729 		JBrowse link
G Gaa glucosidase, alpha, acid acts_upstream_of_or_within IMP (PMID:10547605), (PMID:12115977), (PMID:15207257), (PMID:9384603)
(PMID:11590121), (PMID:15169761), (PMID:9668092)		 MGI PMID:9384603 PMID:9668092 PMID:10547605 PMID:11590121 PMID:12115977 More... NCBI chr11:119,158,789...119,176,284
Ensembl chr11:119,158,713...119,176,280 		JBrowse link
G Gnmt glycine N-methyltransferase acts_upstream_of_or_within IMP (PMID:17937387) MGI PMID:17937387 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 7:24,927,683...24,937,276
Ensembl chr 7:24,927,683...24,937,276 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446 		JBrowse link
G Gys1 glycogen synthase 1, muscle involved_in ISO RGD
MGI		 PMID:6244274 PMID:10572943 GO_REF:0000096 MGI:4417868 RGD:1642811 RGD:2304186 NCBI chr 7:45,084,263...45,106,041
Ensembl chr 7:45,084,268...45,106,043 		JBrowse link
G Gys2 glycogen synthase 2 involved_in ISO RGD
MGI		 PMID:1733780 PMID:6096366 GO_REF:0000096 MGI:4417868 RGD:2304113 RGD:2304117 NCBI chr 6:142,368,339...142,418,856
Ensembl chr 6:142,368,339...142,418,835 		JBrowse link
G Il6st interleukin 6 signal transducer acts_upstream_of_or_within IMP (PMID:10205167) MGI PMID:10205167 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620 		JBrowse link
G Lepr leptin receptor acts_upstream_of_or_within IGI (PMID:28973665) MGI PMID:28973665 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
G Nhlrc1 NHL repeat containing 1 acts_upstream_of_or_within IMP (PMID:23663739)
(PMID:24914213), (PMID:25416783)		 MGI PMID:23663739 PMID:24914213 PMID:25416783 NCBI chr13:47,166,033...47,168,326
Ensembl chr13:47,166,033...47,168,326 		JBrowse link
G Pcdh12 protocadherin 12 acts_upstream_of_or_within IMP (PMID:18477666) MGI PMID:18477666 NCBI chr18:38,400,145...38,417,454
Ensembl chr18:38,400,142...38,417,455 		JBrowse link
G Pgf placental growth factor acts_upstream_of_or_within IMP
IGI		 (PMID:30179860) MGI PMID:30179860 NCBI chr12:85,213,413...85,224,087
Ensembl chr12:85,213,409...85,224,564 		JBrowse link
G Phka1 phosphorylase kinase alpha 1 involved_in
acts_upstream_of_or_within		 IEA UniProt GO_REF:0000002 GO_REF:0000043 MGI:1354194 MGI:2152098 NCBI chr  X:101,557,581...101,687,907
Ensembl chr  X:101,557,581...101,687,852 		JBrowse link
G Phka2 phosphorylase kinase alpha 2 involved_in
acts_upstream_of_or_within		 IEA UniProt GO_REF:0000002 GO_REF:0000043 MGI:1354194 MGI:2152098 NCBI chr  X:159,284,900...159,384,772
Ensembl chr  X:159,285,162...159,381,874 		JBrowse link
G Phkb phosphorylase kinase beta involved_in
acts_upstream_of_or_within		 IEA UniProt GO_REF:0000002 GO_REF:0000043 MGI:1354194 MGI:2152098 NCBI chr 8:86,567,489...86,790,883
Ensembl chr 8:86,567,588...86,788,005 		JBrowse link
G Phkg1 phosphorylase kinase gamma 1 involved_in ISO RGD
MGI		 PMID:3953807 PMID:6281247 GO_REF:0000096 MGI:4417868 RGD:2304176 RGD:2305955 NCBI chr 5:129,892,272...129,907,953
Ensembl chr 5:129,892,262...129,927,390 		JBrowse link
G Phkg2 phosphorylase kinase, gamma 2 (testis) involved_in ISO RGD
MGI		 PMID:1370475 PMID:6281247 GO_REF:0000096 MGI:4417868 RGD:2304176 RGD:727546 NCBI chr 7:127,169,252...127,182,479
Ensembl chr 7:127,172,512...127,182,479 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha acts_upstream_of_or_within TAS (PMID:7736790) MGI PMID:7736790 NCBI chr19:4,242,173...4,245,418
Ensembl chr19:4,242,064...4,245,419 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:32,616,192...32,651,057
Ensembl chr 5:32,616,187...32,674,777 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:122,296,338...122,313,336
Ensembl chr 5:122,296,341...122,313,336 		JBrowse link
G Ppp1r1a protein phosphatase 1, regulatory inhibitor subunit 1A acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr15:103,438,706...103,446,465
Ensembl chr15:103,438,706...103,446,430 		JBrowse link
G Ppp1r2 protein phosphatase 1, regulatory inhibitor subunit 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr16:31,070,359...31,094,095
Ensembl chr16:31,070,355...31,094,095 		JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A acts_upstream_of_or_within TAS (PMID:11361130) MGI PMID:11361130 NCBI chr 6:14,713,821...14,755,273
Ensembl chr 6:14,713,976...14,755,273 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C acts_upstream_of_or_within IDA
IGI		 (PMID:9045612)
(PMID:21552327)		 MGI PMID:9045612 PMID:21552327 NCBI chr19:36,709,131...36,714,004
Ensembl chr19:36,709,131...36,714,053 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr14:55,113,054...55,114,995
Ensembl chr14:55,110,126...55,115,007 		JBrowse link
G Prkag2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:25,067,733...25,311,576
Ensembl chr 5:25,067,742...25,305,640 		JBrowse link
G Pygb brain glycogen phosphorylase involved_in ISO RGD
MGI		 PMID:1554349 GO_REF:0000096 MGI:4417868 RGD:2304136 NCBI chr 2:150,628,716...150,673,668
Ensembl chr 2:150,628,655...150,673,678 		JBrowse link
G Pygl liver glycogen phosphorylase involved_in ISO RGD
MGI		 PMID:1554349 PMID:1733780 PMID:2803260 PMID:6096366 PMID:8550381 More... GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1601233 RGD:2304113 RGD:2304115 RGD:2304117 RGD:2304119 RGD:2304136 NCBI chr12:70,237,589...70,274,457
Ensembl chr12:70,237,585...70,278,262 		JBrowse link
G Pygm muscle glycogen phosphorylase involved_in ISO RGD
MGI		 PMID:6244274 PMID:8550381 PMID:10572943 GO_REF:0000096 MGI:4417868 RGD:1642811 RGD:2304119 RGD:2304186 NCBI chr19:6,434,438...6,448,494
Ensembl chr19:6,434,429...6,448,489 		JBrowse link
G Slc37a4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 acts_upstream_of_or_within IMP (PMID:12925567), (PMID:16891306) MGI PMID:12925567 PMID:16891306 NCBI chr 9:44,308,243...44,314,263
Ensembl chr 9:44,308,149...44,314,265 		JBrowse link
G Stbd1 starch binding domain 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 5:92,750,910...92,754,438
Ensembl chr 5:92,750,900...92,754,438 		JBrowse link
G Stk40 serine/threonine kinase 40 acts_upstream_of_or_within IMP (PMID:23293024) MGI PMID:23293024 NCBI chr 4:125,997,738...126,034,822
Ensembl chr 4:125,997,750...126,034,822 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (PMID:23260145) MGI PMID:23260145 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:21,271,126...21,321,267
Ensembl chr11:21,271,138...21,321,201 		JBrowse link
glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-Coenzyme A dehydrogenase, medium chain involved_in IMP (MGI:4412440|PMID:18459129) BHF-UCL PMID:18459129 MGI:4412440 NCBI chr 3:153,627,990...153,650,280
Ensembl chr 3:153,627,994...153,650,269 		JBrowse link
G Akt1 thymoma viral proto-oncogene 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000043 MGI:1354194 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G Epm2a epilepsy, progressive myoclonic epilepsy, type 2 gene alpha acts_upstream_of_or_within
involved_in		 IMP
IDA
IGI		 (PMID:28536304)
(PMID:17118331)
(PMID:31042462)
(PMID:18040046)		 MGI PMID:17118331 PMID:18040046 PMID:28536304 PMID:31042462 NCBI chr10:11,218,435...11,335,408
Ensembl chr10:11,219,148...11,335,388 		JBrowse link
G Epm2aip1 EPM2A interacting protein 1 acts_upstream_of IMP (PMID:24142699) MGI PMID:24142699 NCBI chr 9:111,100,913...111,108,161
Ensembl chr 9:111,100,997...111,108,161 		JBrowse link
G Gbe1 1,4-alpha-glucan branching enzyme 1 involved_in ISO
IBA
IMP		 (PMID:21856731)
(PMID:31042462)
(PMID:21075835)		 RGD
GO_Central
MGI		 PMID:6449198 PMID:21075835 PMID:21856731 PMID:31042462 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1642743 NCBI chr16:70,110,837...70,366,608
Ensembl chr16:70,110,837...70,366,604 		JBrowse link
G Gck glucokinase involved_in ISO RGD
MGI		 PMID:17028192 GO_REF:0000096 MGI:4417868 RGD:1581879 NCBI chr11:5,850,816...5,900,081
Ensembl chr11:5,850,820...5,900,081 		JBrowse link
G Gyg1 glycogenin 1 involved_in ISO
IBA
IMP		 (PMID:33219378) RGD
GO_Central
MGI		 PMID:8224611 PMID:10710493 PMID:33219378 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:2303736 RGD:2304070 NCBI chr 3:20,176,248...20,209,228
Ensembl chr 3:20,176,248...20,209,481 		JBrowse link
G Gys1 glycogen synthase 1, muscle involved_in
acts_upstream_of_or_within		 ISO
IDA
IMP
IBA		 (PMID:21356517)
(PMID:33219378)
(PMID:17118331), (PMID:20300197)
(PMID:15282316)		 RGD
MGI
GO_Central		 PMID:6449198 PMID:7671134 PMID:15282316 PMID:17118331 PMID:20300197 More... GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1642743 RGD:2303748 NCBI chr 7:45,084,263...45,106,041
Ensembl chr 7:45,084,268...45,106,043 		JBrowse link
G Gys2 glycogen synthase 2 involved_in ISO
IBA
IMP		 (PMID:28483921) RGD
GO_Central
MGI		 PMID:114169 PMID:6449198 PMID:15138155 PMID:28483921 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1582633 RGD:1642743 RGD:2304128 NCBI chr 6:142,368,339...142,418,856
Ensembl chr 6:142,368,339...142,418,835 		JBrowse link
G Nhlrc1 NHL repeat containing 1 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (PMID:31042462)
(PMID:28536304)
(PMID:20538597)		 MGI PMID:20538597 PMID:28536304 PMID:31042462 NCBI chr13:47,166,033...47,168,326
Ensembl chr13:47,166,033...47,168,326 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IMP (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chr11:98,658,758...98,666,233
Ensembl chr11:98,658,758...98,666,159 		JBrowse link
G Per2 period circadian clock 2 involved_in IMP (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chr 1:91,343,699...91,387,028
Ensembl chr 1:91,343,704...91,387,046 		JBrowse link
G Pgm1 phosphoglucomutase 1 involved_in ISO (PMID:28882528) MGI PMID:28882528 NCBI chr 4:99,786,648...99,844,491
Ensembl chr 4:99,786,611...99,844,491 		JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in IGI (PMID:24265765) MGI PMID:24265765 NCBI chr 5:64,250,258...64,285,698
Ensembl chr 5:64,250,293...64,285,694 		JBrowse link
G Phkg1 phosphorylase kinase gamma 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:129,892,272...129,907,953
Ensembl chr 5:129,892,262...129,927,390 		JBrowse link
G Phkg2 phosphorylase kinase, gamma 2 (testis) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:127,169,252...127,182,479
Ensembl chr 7:127,172,512...127,182,479 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C involved_in
acts_upstream_of_or_within		 IDA
IMP		 (PMID:9045612)
(PMID:10683377)		 MGI PMID:9045612 PMID:10683377 NCBI chr19:36,709,131...36,714,004
Ensembl chr19:36,709,131...36,714,053 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G acts_upstream_of IMP
IDA		 (PMID:21471512) MGI PMID:21471512 NCBI chr13:36,142,816...36,154,371
Ensembl chr13:36,142,822...36,154,371 		JBrowse link
G Ptges3 prostaglandin E synthase 3 acts_upstream_of_or_within IMP (PMID:17438133) MGI PMID:17438133 NCBI chr10:127,894,851...127,913,123
Ensembl chr10:127,894,823...127,913,141 		JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IMP
ISO		 (PMID:32286295)
(PMID:34330832)		 MGI PMID:32286295 PMID:34330832 GO_REF:0000119 MGI:4834177 NCBI chr11:21,271,126...21,321,267
Ensembl chr11:21,271,138...21,321,201 		JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenergic receptor, alpha 1b acts_upstream_of IMP (PMID:14581480) MGI PMID:14581480 NCBI chr11:43,665,432...43,792,076
Ensembl chr11:43,665,433...43,792,037 		JBrowse link
G Adrb1 adrenergic receptor, beta 1 involved_in ISO RGD
MGI		 PMID:17911346 GO_REF:0000096 MGI:4417868 RGD:5129142 NCBI chr19:56,710,549...56,713,582
Ensembl chr19:56,710,631...56,721,545 		JBrowse link
G Agl amylo-1,6-glucosidase, 4-alpha-glucanotransferase involved_in ISO
IMP
IBA		 (PMID:25092169)
(PMID:24613482)		 RGD
MGI
GO_Central		 PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 PMID:24613482 More... GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 3:116,533,648...116,601,815
Ensembl chr 3:116,533,648...116,601,815 		JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within IMP (PMID:10625614) MGI PMID:10625614 NCBI chr11:101,258,542...101,268,729
Ensembl chr11:101,258,387...101,268,729 		JBrowse link
G Gaa glucosidase, alpha, acid acts_upstream_of_or_within
involved_in		 ISO
IMP
IBA		 (PMID:11785984)
(PMID:11328962)
(PMID:10838256)		 RGD
MGI
GO_Central		 PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1599504 RGD:1599506 NCBI chr11:119,158,789...119,176,284
Ensembl chr11:119,158,713...119,176,280 		JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of IMP (PMID:10391216) MGI PMID:10391216 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299 		JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within IMP (PMID:19696889) MGI PMID:19696889 NCBI chr15:97,990,470...98,030,328
Ensembl chr15:97,990,470...98,030,332 		JBrowse link
G Pgm1 phosphoglucomutase 1 involved_in ISO (PMID:28882528) MGI PMID:28882528 NCBI chr 4:99,786,648...99,844,491
Ensembl chr 4:99,786,611...99,844,491 		JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in IMP (PMID:927504) MGI PMID:927504 NCBI chr 5:64,250,258...64,285,698
Ensembl chr 5:64,250,293...64,285,694 		JBrowse link
G Phkg1 phosphorylase kinase gamma 1 involved_in ISO (PMID:25340394) MGI PMID:25340394 NCBI chr 5:129,892,272...129,907,953
Ensembl chr 5:129,892,262...129,927,390 		JBrowse link
G Phkg2 phosphorylase kinase, gamma 2 (testis) involved_in IMP (PMID:34083142) MGI PMID:34083142 NCBI chr 7:127,169,252...127,182,479
Ensembl chr 7:127,172,512...127,182,479 		JBrowse link
G Pygb brain glycogen phosphorylase involved_in ISO
IDA
IBA		 (PMID:32446205) RGD
MGI
GO_Central		 PMID:10634496 PMID:11071367 PMID:16226229 PMID:32446205 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr 2:150,628,716...150,673,668
Ensembl chr 2:150,628,655...150,673,678 		JBrowse link
G Pygl liver glycogen phosphorylase involved_in ISO
IBA
IMP		 (PMID:31701076) RGD
GO_Central
MGI		 PMID:114169 PMID:6449198 PMID:15152027 PMID:31701076 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr12:70,237,589...70,274,457
Ensembl chr12:70,237,585...70,278,262 		JBrowse link
G Pygm muscle glycogen phosphorylase involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP
IDA		 (PMID:31511858)
(PMID:17689562)
(PMID:15282316), (PMID:17689562)		 RGD
GO_Central
MGI		 PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 More... GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr19:6,434,438...6,448,494
Ensembl chr19:6,434,429...6,448,489 		JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:92,750,910...92,754,438
Ensembl chr 5:92,750,900...92,754,438 		JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:46,865,484...46,874,683
Ensembl chr18:46,863,211...46,874,647 		JBrowse link
G Atg2a autophagy related 2A involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:6,291,508...6,312,332
Ensembl chr19:6,291,698...6,312,365 		JBrowse link
G Atg2b autophagy related 2B involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:105,579,798...105,651,554
Ensembl chr12:105,582,395...105,651,470 		JBrowse link
G Atg3 autophagy related 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:44,979,192...45,008,901
Ensembl chr16:44,979,148...45,008,901 		JBrowse link
G Gaa glucosidase, alpha, acid involved_in IMP
ISO		 (PMID:12739885)
(PMID:24417)		 MGI PMID:24417 PMID:12739885 NCBI chr11:119,158,789...119,176,284
Ensembl chr11:119,158,713...119,176,280 		JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IMP (PMID:20810658) MGI PMID:20810658 NCBI chr 6:129,510,155...129,519,294
Ensembl chr 6:129,510,123...129,519,309 		JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:6,284,858...6,346,599
Ensembl chr 1:6,276,421...6,346,872 		JBrowse link
G Stbd1 starch binding domain 1 involved_in
acts_upstream_of_or_within		 ISO
IMP
IC		 (PMID:20810658)
(MGI:7261139|PMID:20810658)		 MGI
GOC		 PMID:20810658 GO_REF:0000119 MGI:4834177 MGI:7261139 NCBI chr 5:92,750,910...92,754,438
Ensembl chr 5:92,750,900...92,754,438 		JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:7,588,212...7,594,439
Ensembl chr  X:7,580,572...7,594,445 		JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:121,218,029...121,246,393
Ensembl chr11:121,218,050...121,245,271 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:109,464,347...109,502,215
Ensembl chr11:109,464,157...109,502,793 		JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:142,615,269...142,655,427
Ensembl chr 5:142,613,453...142,656,343 		JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1810024B03Rik RIKEN cDNA 1810024B03 gene involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:127,028,204...127,050,200
Ensembl chr 2:127,028,275...127,050,200 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 involved_in ISO RGD
MGI		 PMID:8349040 GO_REF:0000096 MGI:4417868 RGD:1625425 NCBI chr 6:87,019,828...87,069,189
Ensembl chr 6:87,019,828...87,069,179 		JBrowse link
G Grb10 growth factor receptor bound protein 10 involved_in TAS
ISO		 (MGI:3847873|PMID:15664450) BHF-UCL
MGI		 PMID:15664450 GO_REF:0000096 MGI:3847873 MGI:4417868 NCBI chr11:11,880,499...11,987,428
Ensembl chr11:11,880,508...11,988,683 		JBrowse link
G Inpp5k inositol polyphosphate 5-phosphatase K involved_in IMP
IBA
ISO		 (MGI:5294535|PMID:19250614) UniProt
GO_Central
MGI		 PMID:19250614 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5294535 NCBI chr11:75,519,893...75,539,691
Ensembl chr11:75,521,814...75,539,697 		JBrowse link
G Insr insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Mir15b microRNA 15b acts_upstream_of ISO (PMID:26179126) ARUK-UCL PMID:26179126 NCBI chr 3:68,917,105...68,917,168
Ensembl chr 3:68,917,105...68,917,168 		JBrowse link
G Mir195a microRNA 195a acts_upstream_of ISO (PMID:25240198) ARUK-UCL PMID:25240198 NCBI chr11:70,125,868...70,125,961
Ensembl chr11:70,125,868...70,125,961 		JBrowse link
G Pask PAS domain containing serine/threonine kinase involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:93,237,165...93,271,237
Ensembl chr 1:93,236,492...93,271,204 		JBrowse link
G Prkag3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit acts_upstream_of_or_within IMP (PMID:15857891) MGI PMID:15857891 NCBI chr 1:74,778,062...74,788,623
Ensembl chr 1:74,778,081...74,788,380 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenergic receptor, alpha 1b acts_upstream_of_or_within IMP (PMID:14581480) MGI PMID:14581480 NCBI chr11:43,665,432...43,792,076
Ensembl chr11:43,665,433...43,792,037 		JBrowse link
G Ins1 insulin I involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914 		JBrowse link
G Ins2 insulin II involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO MGI GO_REF:0000008 NCBI chr 8:35,842,847...35,855,293
Ensembl chr 8:35,842,893...35,855,293 		JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G C1qtnf2 C1q and tumor necrosis factor related protein 2 acts_upstream_of_or_within IDA (PMID:15231994) MGI PMID:15231994 NCBI chr11:43,364,984...43,382,485
Ensembl chr11:43,365,103...43,382,352 		JBrowse link
G Cd36 CD36 molecule ISO RGD PMID:14640889 RGD:1600636 NCBI chr 5:17,986,680...18,093,828
Ensembl chr 5:17,986,688...18,093,799 		JBrowse link
G Dyrk2 dual-specificity tyrosine phosphorylation regulated kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:118,691,507...118,725,144
Ensembl chr10:118,691,508...118,706,114 		JBrowse link
G Epm2aip1 EPM2A interacting protein 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:24142699) MGI
GO_Central		 PMID:24142699 GO_REF:0000033 NCBI chr 9:111,100,913...111,108,161
Ensembl chr 9:111,100,997...111,108,161 		JBrowse link
G Esrrb estrogen related receptor, beta involved_in IDA
ISO		 (MGI:5905261|PMID:24481529) BHF-UCL
MGI		 PMID:24481529 GO_REF:0000096 MGI:4417868 MGI:5905261 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402 		JBrowse link
G Gck glucokinase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:5,850,816...5,900,081
Ensembl chr11:5,850,820...5,900,081 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Igf2 insulin-like growth factor 2 acts_upstream_of IMP (MGI:4438697|PMID:20032056) BHF-UCL PMID:20032056 MGI:4438697 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Ins1 insulin I involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914 		JBrowse link
G Ins2 insulin II involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Insr insulin receptor acts_upstream_of
involved_in		 IMP
ISO		 (MGI:4438697|PMID:20032056) BHF-UCL
MGI		 PMID:20032056 GO_REF:0000119 MGI:4438697 MGI:4834177 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:82,210,826...82,269,160
Ensembl chr 1:82,210,822...82,269,137 		JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:11,034,681...11,058,929
Ensembl chr 8:11,034,681...11,058,458 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr14:55,113,054...55,114,995
Ensembl chr14:55,110,126...55,115,007 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G acts_upstream_of_or_within IMP
IDA		 (PMID:21471512) MGI PMID:21471512 NCBI chr13:36,142,816...36,154,371
Ensembl chr13:36,142,822...36,154,371 		JBrowse link
G Pth parathyroid hormone involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:112,984,783...112,987,879
Ensembl chr 7:112,984,787...112,987,777 		JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in IMP (MGI:3690172|PMID:11001060) BHF-UCL PMID:11001060 MGI:3690172 NCBI chr19:40,280,484...40,502,399
Ensembl chr19:40,283,197...40,502,223 		JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 involved_in ISO RGD
MGI		 PMID:22998876 GO_REF:0000096 MGI:4417868 RGD:329412477 NCBI chr 1:165,309,114...165,404,347
Ensembl chr 1:165,312,752...165,404,343 		JBrowse link
G Adra1b adrenergic receptor, alpha 1b acts_upstream_of_or_within IMP (PMID:14581480) MGI PMID:14581480 NCBI chr11:43,665,432...43,792,076
Ensembl chr11:43,665,433...43,792,037 		JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within IMP (PMID:10391216) MGI PMID:10391216 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299 		JBrowse link
G Phka1 phosphorylase kinase alpha 1 involved_in ISO (PMID:33799212) FlyBase PMID:33799212 NCBI chr  X:101,557,581...101,687,907
Ensembl chr  X:101,557,581...101,687,852 		JBrowse link
G Phkg1 phosphorylase kinase gamma 1 involved_in ISO (PMID:25340394) MGI PMID:25340394 NCBI chr 5:129,892,272...129,907,953
Ensembl chr 5:129,892,262...129,927,390 		JBrowse link
G Phkg2 phosphorylase kinase, gamma 2 (testis) involved_in IMP (PMID:34083142) MGI PMID:34083142 NCBI chr 7:127,169,252...127,182,479
Ensembl chr 7:127,172,512...127,182,479 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Inpp5k inositol polyphosphate 5-phosphatase K involved_in IMP (MGI:5294535|PMID:19250614) UniProt PMID:19250614 MGI:5294535 NCBI chr11:75,519,893...75,539,691
Ensembl chr11:75,521,814...75,539,697 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO RGD
MGI		 PMID:17142137 GO_REF:0000096 MGI:4417868 RGD:1625611 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO RGD
MGI		 PMID:7720853 GO_REF:0000096 MGI:4417868 RGD:2304267 NCBI chr19:4,242,173...4,245,418
Ensembl chr19:4,242,064...4,245,419 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO RGD
MGI		 PMID:7720853 GO_REF:0000096 MGI:4417868 RGD:2304267 NCBI chr 5:32,616,192...32,651,057
Ensembl chr 5:32,616,187...32,674,777 		JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:14,713,821...14,755,273
Ensembl chr 6:14,713,976...14,755,273 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO
IBA		 RGD
GO_Central
MGI		 PMID:7720853 PMID:11716774 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2304267 RGD:2306167 NCBI chr 8:35,842,847...35,855,293
Ensembl chr 8:35,842,893...35,855,293 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C involved_in ISO
IBA		 RGD
GO_Central
MGI		 PMID:11716774 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2306167 NCBI chr19:36,709,131...36,714,004
Ensembl chr19:36,709,131...36,714,053 		JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D involved_in ISO
IBA		 RGD
GO_Central
MGI		 PMID:11716774 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2306167 NCBI chr 2:178,052,999...178,056,256
Ensembl chr 2:178,052,999...178,056,265 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in ISO
IBA		 RGD
GO_Central
MGI		 PMID:15752363 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2306166 NCBI chr14:55,113,054...55,114,995
Ensembl chr14:55,110,126...55,115,007 		JBrowse link
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21668450) MGI
GO_Central		 PMID:21668450 GO_REF:0000033 NCBI chr  X:7,424,815...7,440,541
Ensembl chr  X:7,423,535...7,440,522 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:36,142,816...36,154,371
Ensembl chr13:36,142,822...36,154,371 		JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO RGD
MGI		 PMID:7720853 GO_REF:0000096 MGI:4417868 RGD:2304267 NCBI chr19:4,242,173...4,245,418
Ensembl chr19:4,242,064...4,245,419 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO RGD
MGI		 PMID:7720853 GO_REF:0000096 MGI:4417868 RGD:2304267 NCBI chr 5:32,616,192...32,651,057
Ensembl chr 5:32,616,187...32,674,777 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B acts_upstream_of_or_within
involved_in		 ISO (PMID:22225877) RGD
MGI
MGI		 PMID:7720853 PMID:11716774 PMID:22225877 GO_REF:0000096 MGI:4417868 RGD:2304267 RGD:2306167 NCBI chr 8:35,842,847...35,855,293
Ensembl chr 8:35,842,893...35,855,293 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C involved_in ISO RGD
MGI		 PMID:11716774 GO_REF:0000096 MGI:4417868 RGD:2306167 NCBI chr19:36,709,131...36,714,004
Ensembl chr19:36,709,131...36,714,053 		JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D involved_in ISO RGD
MGI		 PMID:11716774 GO_REF:0000096 MGI:4417868 RGD:2306167 NCBI chr 2:178,052,999...178,056,256
Ensembl chr 2:178,052,999...178,056,265 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in ISO RGD
MGI		 PMID:15752363 GO_REF:0000096 MGI:4417868 RGD:2306166 NCBI chr14:55,113,054...55,114,995
Ensembl chr14:55,110,126...55,115,007 		JBrowse link
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcgr glucagon receptor involved_in IMP (MGI:2449992|PMID:12552113) UniProt PMID:12552113 MGI:2449992 NCBI chr11:120,420,011...120,429,815
Ensembl chr11:120,421,525...120,429,812 		JBrowse link
G Khk ketohexokinase involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:22371574) GO_Central
MGI		 PMID:22371574 GO_REF:0000033 NCBI chr 5:31,078,780...31,088,592
Ensembl chr 5:31,078,775...31,088,592 		JBrowse link
G Phlda2 pleckstrin homology like domain, family A, member 2 acts_upstream_of_or_within IDA (PMID:19884348) MGI PMID:19884348 NCBI chr 7:143,055,282...143,056,882
Ensembl chr 7:143,055,282...143,056,887 		JBrowse link
G Pomc pro-opiomelanocortin-alpha acts_upstream_of_or_within IMP (PMID:21184805) MGI PMID:21184805 NCBI chr12:4,004,945...4,010,643
Ensembl chr12:4,004,951...4,010,642 		JBrowse link
G Rubcnl RUN and cysteine rich domain containing beclin 1 interacting protein like involved_in IMP (MGI:6282647|PMID:30704899) UniProt PMID:30704899 MGI:6282647 NCBI chr14:75,253,467...75,289,977
Ensembl chr14:75,253,467...75,289,972 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28576
    metabolic process 11010
      cellular metabolic process 9207
        generation of precursor metabolites and energy 497
          energy derivation by oxidation of organic compounds 369
            energy reserve metabolic process 109
              glycogen metabolic process 96
                glycogen biosynthetic process + 51
                glycogen catabolic process + 35
                negative regulation of glycogen metabolic process + 14
                positive regulation of glycogen metabolic process + 25
                regulation of glycogen metabolic process + 47
paths to the root