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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:stomach cancer
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Accession:DOID:10534 term browser browse the term
Definition:A gastrointestinal system cancer that is located_in the stomach. (DO)
Synonyms:exact_synonym: cancer of stomach;   cancer of the stomach;   gastric cancer;   gastric cancers;   stomach cancers
 narrow_synonym: familial diffuse gastric cancer and cleft lip with or without cleft palate;   intestinal gastric cancer
 alt_id: MIM:613659
 xref: EFO:0003897;   GARD:7704;   ICD10CM:C16;   ICD10CM:C16.2;   ICD10CM:C16.5;   ICD10CM:C16.6;   ICD9CM:151;   ICD9CM:151.4;   ICD9CM:151.5;   ICD9CM:151.6;   NCI:C3387;   NCI:C9331
For additional species annotation, visit the Alliance of Genome Resources.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
stomach cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO human cells in mouse model; associated with mental depression; protein:increased expression, increased phosphorylation:stomach (human) RGD PMID:31396300 RGD:126908003 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Acvr1b activin A receptor type 1B disease_progression ISO RGD PMID:32066878 RGD:151665490 NCBI chrNW_004955547:2,311,573...2,366,106
Ensembl chrNW_004955547:2,323,771...2,367,263 		JBrowse link
G Ada adenosine deaminase treatment ISO protein:increased expression:stomach: RGD PMID:4010093 PMID:8076377 RGD:152995265 RGD:152995290 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Adar adenosine deaminase RNA specific exacerbates ISO mRNA:increased expression:mucosa of stomach (human) RGD PMID:30563560 RGD:14700703 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938 		JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 disease_progression ISO RGD PMID:11172604 RGD:13831357 NCBI chrNW_004955454:1,250,261...1,313,547
Ensembl chrNW_004955454:1,237,363...1,314,127 		JBrowse link
G Adm adrenomedullin treatment ISO human cells in mouse model RGD PMID:16052530 RGD:153344579 NCBI chrNW_004955414:25,951,473...25,953,593
Ensembl chrNW_004955414:25,951,349...25,953,645 		JBrowse link
G Anxa1 annexin A1 ISO RGD PMID:23236538 RGD:7421587 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer OMIM
ClinVar		 PMID:1316610 PMID:1317264 PMID:1324223 PMID:8381579 PMID:9585611 More... NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832 		JBrowse link
G Arid1a AT-rich interaction domain 1A treatment
disease_progression
exacerbates
susceptibility		 ISO human gene in mouse model
protein:decreased expression:stomach (human)
DNA:missense mutation, nonsense mutation:exon 9: Pro912Thr (C>A), Gln920Ter (C >T) (Human)
mRNA:decreased expression:stomach (human)
associated with Epstein-Barr Virus Infections;protein:decreased expression:stomach (human)		 RGD PMID:22915242 PMID:26067140 PMID:26468418 PMID:26637902 PMID:27323812 More... RGD:125097489 RGD:125097523 RGD:126781704 RGD:126781705 RGD:126781706 RGD:126781725 RGD:126781773 RGD:126790633 RGD:126790641 RGD:126848733 RGD:126848744 RGD:126848772 NCBI chrNW_004955452:6,068,631...6,120,759
Ensembl chrNW_004955452:6,068,631...6,120,759 		JBrowse link
G Arid1b AT-rich interaction domain 1B disease_progression ISO protein:decreased expression:stomach (human) RGD PMID:26637902 RGD:126848744 NCBI chrNW_004955439:5,041,111...5,454,692
Ensembl chrNW_004955439:5,043,967...5,412,741 		JBrowse link
G Arid2 AT-rich interaction domain 2 onset ISO protein:decreased expression:stomach (human) RGD PMID:26637902 RGD:126848744 NCBI chrNW_004955500:4,998,555...5,177,180
Ensembl chrNW_004955500:4,998,555...5,175,776 		JBrowse link
G Arpc1b actin related protein 2/3 complex subunit 1B ISO mRNA:decreased expression:gastric epithelium (human) RGD PMID:15279900 RGD:11046270 NCBI chrNW_004955460:15,055,753...15,069,093
Ensembl chrNW_004955460:15,055,480...15,069,093 		JBrowse link
G Aspm assembly factor for spindle microtubules ISO mRNA,protein:increased expression:stomach: RGD PMID:26178168 RGD:13439749 NCBI chrNW_004955406:33,665,675...33,720,468
Ensembl chrNW_004955406:33,661,322...33,720,259 		JBrowse link
G Atm ATM serine/threonine kinase severity ISO protein:decreased expression:mucosa of stomach (human)
ClinVar Annotator: match by term: Gastric cancer
protein:decreased phosphorylation:stomach (human)		 RGD
ClinVar		 PMID:2166257 PMID:7792600 PMID:8698354 PMID:8755918 PMID:8808599 More... RGD:150340700 RGD:150340715 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545 		JBrowse link
G Atp4a ATPase H+/K+ transporting subunit alpha severity ISO mRNA:increased expression:stomach (human) RGD PMID:33470887 RGD:401854251 NCBI chrNW_004955468:4,778,327...4,844,498
Ensembl chrNW_004955468:4,778,295...4,842,366 		JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta ISO DNA:hypermethylation:exon, stomach, plasma RGD PMID:23317218 RGD:14696738 NCBI chrNW_004955404:362,410...372,077
Ensembl chrNW_004955404:362,368...372,077 		JBrowse link
G Atrx ATRX chromatin remodeler ISO RGD PMID:27006499 RGD:11354809 NCBI chrNW_004955557:947,368...1,252,701
Ensembl chrNW_004955557:947,167...1,252,724 		JBrowse link
G Bambi BMP and activin membrane bound inhibitor disease_progression ISO RGD PMID:24752577 RGD:14390158 NCBI chrNW_004955429:21,024,396...21,025,890
Ensembl chrNW_004955429:21,024,374...21,025,890 		JBrowse link
G Bard1 BRCA1 associated RING domain 1 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:16199547 PMID:20077502 PMID:21344236 PMID:23334666 PMID:25741868 More... NCBI chrNW_004955457:1,187,942...1,258,475
Ensembl chrNW_004955457:1,187,942...1,253,803 		JBrowse link
G Barhl2 BarH like homeobox 2 treatment ISO RGD PMID:27441821 RGD:14392685 NCBI chrNW_004955423:3,516,973...3,522,459
Ensembl chrNW_004955423:3,516,660...3,522,536 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Bcl2 BCL2 apoptosis regulator treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Bcl2l1 BCL2 like 1 ameliorates ISO human cells in mouse model RGD PMID:26432329 RGD:150520156 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174 		JBrowse link
G Bcor BCL6 corepressor disease_progression ISO RGD PMID:33145269 RGD:150340707 NCBI chrNW_004955566:1,412,540...1,510,339
Ensembl chrNW_004955566:1,412,540...1,457,329 		JBrowse link
G Bgn biglycan severity ISO mRNA, protein:increased expression:stomach (human) RGD PMID:33470887 RGD:401854251 NCBI chrNW_004955580:252,183...263,179
Ensembl chrNW_004955580:252,139...263,663 		JBrowse link
G Brca1 BRCA1 DNA repair associated treatment
susceptibility		 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer
DNA:SNP: :rs799917 (human)		 RGD
ClinVar		 PMID:734551 PMID:7627958 PMID:7894493 PMID:8554067 PMID:8723683 More... RGD:126925956 RGD:126925962 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528 		JBrowse link
G Brca2 BRCA2 DNA repair associated ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:278235 PMID:8524414 PMID:8589730 PMID:8665505 PMID:8705994 More... NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432 		JBrowse link
G Brip1 BRCA1 interacting DNA helicase 1 ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:2455662 PMID:3375802 PMID:11301010 PMID:14983014 PMID:16116421 More... NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592 		JBrowse link
G Calr calreticulin disease_progression
exacerbates		 ISO protein:increased expression:stomach (human) RGD PMID:19050968 PMID:31725767 RGD:150521680 RGD:150521686 NCBI chrNW_004955415:31,985,147...31,989,372
Ensembl chrNW_004955415:31,985,147...31,989,372 		JBrowse link
G Capn9 calpain 9 ISO RGD PMID:10835488 RGD:734688 NCBI chrNW_004955492:7,809,188...7,845,090
Ensembl chrNW_004955492:7,809,188...7,845,090 		JBrowse link
G Casp3 caspase 3 treatment
ameliorates		 ISO human cells in mouse model RGD PMID:26432329 PMID:29408335 PMID:32106377 RGD:127284846 RGD:127284886 RGD:150520156 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Casp9 caspase 9 treatment ISO human cells in mouse model RGD PMID:29408335 PMID:32106377 RGD:127284846 RGD:127284886 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738 		JBrowse link
G Cbx7 chromobox 7 disease_progression ISO protein:increased expression:stomach: RGD PMID:20723236 RGD:9587358 NCBI chrNW_004955413:25,079,627...25,100,039
Ensembl chrNW_004955413:25,086,186...25,100,039 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 disease_progression ISO mRNA:altered expression:stomach, tumor (human) RGD PMID:29069277 RGD:151893464 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143 		JBrowse link
G Ccn3 cellular communication network factor 3 severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955417:25,218,613...25,225,755 JBrowse link
G Ccnd2 cyclin D2 severity
disease_progression		 ISO protein:increased expression:stomach RGD PMID:10666388 PMID:11552926 PMID:25960238 RGD:151665101 RGD:151665103 RGD:151665106 NCBI chrNW_004955413:2,083,351...2,108,450
Ensembl chrNW_004955413:2,083,351...2,103,430 		JBrowse link
G Cd274 CD274 molecule disease_progression ISO RGD PMID:32089413 PMID:32380498 RGD:40818238 RGD:41410803 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Cd8a CD8 subunit alpha ameliorates ISO associated with Epstein-Barr Virus Infections;mRNA:increased expression:stomach (human)
protein:decreased expression:stomach, T cell (human)		 RGD PMID:29915957 PMID:30106451 RGD:124715442 RGD:124715443 NCBI chrNW_004955424:952,595...979,159
Ensembl chrNW_004955424:952,502...978,636 		JBrowse link
G Cda cytidine deaminase ISO protein:increased expression:stomach: RGD PMID:8076377 RGD:152995290 NCBI chrNW_004955452:1,131,968...1,156,777
Ensembl chrNW_004955452:1,132,049...1,156,565 		JBrowse link
G Cdc73 cell division cycle 73 ameliorates ISO mRNA:increased expression:mucosa of stomach (human) RGD PMID:29221126 RGD:150539444 NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812 		JBrowse link
G Cdh1 cadherin 1 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:8557030 PMID:9744472 PMID:10072428 PMID:11948460 PMID:15235021 More... NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967 		JBrowse link
G Cdk12 cyclin dependent kinase 12 exacerbates ISO protein:decreased expression:stomach (human) RGD PMID:32534699 RGD:151361171 NCBI chrNW_004955451:14,244,392...14,345,885
Ensembl chrNW_004955451:14,244,978...14,309,689 		JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:36988593 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718 		JBrowse link
G Chek2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:10617473 PMID:11053450 PMID:11298456 PMID:11390408 PMID:11571648 More... NCBI chrNW_004955455:2,969,113...3,008,004
Ensembl chrNW_004955455:2,969,270...3,003,173 		JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit ISO DNA:hypermethylation:CpG: RGD PMID:21831520 RGD:151347539 NCBI chrNW_004955450:979,630...1,011,316
Ensembl chrNW_004955450:977,075...1,011,372 		JBrowse link
G Col6a3 collagen type VI alpha 3 chain severity ISO mRNA, protein:increased expression:stomach (human)
mRNA:increased expression:stomach (human)		 RGD PMID:33470887 PMID:37483811 RGD:401854242 RGD:401854251 NCBI chrNW_004955542:2,869,183...2,950,569
Ensembl chrNW_004955542:2,887,723...2,949,062 		JBrowse link
G Csf1r colony stimulating factor 1 receptor exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:29767252 RGD:150524281 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751 		JBrowse link
G Ctnnb1 catenin beta 1 disease_progression ISO mRNA:altered expression:stomach, tumor (human) RGD PMID:29069277 RGD:151893464 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G CUNH11orf65 chromosome unknown C11orf65 homolog ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:2166257 PMID:8698354 PMID:8755918 PMID:8808599 PMID:8845835 More... NCBI chrNW_004955412:10,533,174...10,567,364
Ensembl chrNW_004955412:10,533,441...10,567,612 		JBrowse link
G Cux1 cut like homeobox 1 exacerbates ISO protein:decreased activity:stomach (human) RGD PMID:23255599 RGD:152985542 NCBI chrNW_004955456:15,292,562...15,636,835
Ensembl chrNW_004955456:15,276,959...15,638,004 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 disease_progression
ameliorates
exacerbates		 ISO human cells in mouse model
protein:increased expression:stomach (human)
mRNA:increased expression:stomach (human)		 RGD PMID:19148483 PMID:21633638 PMID:25368239 PMID:27007162 PMID:28544312 RGD:151665321 RGD:152023608 RGD:152023624 RGD:152023648 RGD:152023660 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109 		JBrowse link
G Cys1 cystin 1 severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955487:5,455,820...5,461,362 JBrowse link
G Dab2ip DAB2 interacting protein susceptibility
severity		 ISO DNA:SNPs,haplotype:intron: (rs2243421) (human)
mRNA,protein:decreased expression:stomach (human)		 RGD PMID:23246699 PMID:31713929 RGD:151665146 RGD:151665151 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402 		JBrowse link
G Daxx death domain associated protein disease_progression
severity
exacerbates		 ISO protein:decreased expression:stomach (human)
protein:altered expression:nucleus, cytoplasm (human)
protein:decreased expression:cytoplasm (human)		 RGD PMID:28812328 PMID:32203224 PMID:32641734 RGD:152025196 RGD:152025197 RGD:152025201 NCBI chrNW_004955437:1,869,692...1,874,041
Ensembl chrNW_004955437:1,869,572...1,873,050 		JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 severity
ameliorates
disease_progression
exacerbates		 ISO RGD PMID:26934957 PMID:27010547 RGD:150429704 RGD:150429705 NCBI chrNW_004955462:13,578,638...13,644,834
Ensembl chrNW_004955462:13,584,724...13,642,968 		JBrowse link
G Dicer1 dicer 1, ribonuclease III disease_progression ISO RGD PMID:18167183 RGD:149735323 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha susceptibility ISO DNA:polymorphism:promoter:-488A>G(rs36012910)(human) RGD PMID:20128888 RGD:9589068 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059 		JBrowse link
G Dock6 dedicator of cytokinesis 6 severity
disease_progression		 ISO RGD PMID:29587866 PMID:32753649 RGD:155791564 RGD:155791565 NCBI chrNW_004955495:2,174,802...2,216,424
Ensembl chrNW_004955495:2,174,966...2,216,423 		JBrowse link
G Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 ISO protein:decreased expression:stomach: RGD PMID:21789020 RGD:10401218 NCBI chrNW_004955465:5,878,055...5,895,232
Ensembl chrNW_004955465:5,878,058...5,895,223 		JBrowse link
G Eef2 eukaryotic translation elongation factor 2 disease_progression ISO protein:increased expression:stomach (human)
human cells in mouse model		 RGD PMID:19360331 PMID:24589652 RGD:153297816 RGD:153298969 NCBI chrNW_004955495:4,800,103...4,807,714
Ensembl chrNW_004955495:4,799,922...4,807,252 		JBrowse link
G Efnb1 ephrin B1 disease_progression ISO mRNA:increased expression:stomach (human) RGD PMID:12136247 RGD:153323289 NCBI chrNW_004955475:8,360,504...8,372,431
Ensembl chrNW_004955475:8,360,465...8,373,578 		JBrowse link
G Efnb2 ephrin B2 ISO mRNA:increased expression:stomach (human) RGD PMID:12136247 RGD:153323289 NCBI chrNW_004955404:5,000,906...5,030,068
Ensembl chrNW_004955404:5,000,906...5,030,126 		JBrowse link
G Egfr epidermal growth factor receptor treatment ISO associated with Helicobacter Infections RGD PMID:28473630 RGD:38599214 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Emx2 empty spiracles homeobox 2 ameliorates ISO human cells in mouse model RGD PMID:23029345 RGD:153323292 NCBI chrNW_004955431:22,192,446...22,199,141
Ensembl chrNW_004955431:22,192,446...22,199,279 		JBrowse link
G Epcam epithelial cell adhesion molecule ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:18572020 PMID:20034091 PMID:20981223 PMID:23462293 PMID:24337010 More... NCBI chrNW_004955441:14,155,084...14,167,584
Ensembl chrNW_004955441:14,155,082...14,169,161 		JBrowse link
G Ephb1 EPH receptor B1 ISO mRNA:increased expression:stomach (human) RGD PMID:12136247 RGD:153323289 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Gastric cancer OMIM
ClinVar		 PMID:15457249 PMID:18339846 PMID:25157968 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit severity
ameliorates
no_association
disease_progression
treatment		 ISO DNA:snps:exon, intron:c.354T>C, c.-7-277G>T (human) (rs11615, rs2298881)
mRNA:increased expression:stomach (human)
DNA:SNP:intron: (rs3212961) (human)
DNA:snp:intron:c.-7-277G>T (human) (rs2298881)
DNA:snp:3' utr:c.*197G>T (rs3212986) (human)
DNA:SNP:exon:354C>T (human)		 RGD PMID:23338051 PMID:24318989 PMID:24793015 PMID:26499900 PMID:27173253 More... RGD:11252163 RGD:11340202 RGD:13207309 RGD:13207425 RGD:13207427 RGD:155260339 RGD:155260342 NCBI chrNW_004955555:2,393,510...2,430,180
Ensembl chrNW_004955555:2,393,278...2,406,582 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit disease_progression
ameliorates
exacerbates		 ISO DNA:SNP:exon:p.K751Q (2251A>C) (rs13181) (human)
mRNA:increased expression:stomach (human)
DNA:SNP:intron: (rs50871) (human)		 RGD PMID:26499900 PMID:27340861 PMID:30417012 RGD:11340202 RGD:155260339 RGD:155260342 NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:30417012 RGD:155260342 NCBI chrNW_004955442:4,833,453...4,861,201
Ensembl chrNW_004955442:4,831,721...4,861,122 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ameliorates ISO DNA:SNP:intron: (rs2094258) (human) RGD PMID:27340861 RGD:155260339 NCBI chrNW_004955404:8,294,506...8,321,505
Ensembl chrNW_004955404:8,294,346...8,321,112 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor exacerbates ISO mRNA:increased expression:stomach (human)
DNA:SNP:enhancer: (rs1917799) (human)		 RGD PMID:27340861 PMID:30417012 RGD:155260339 RGD:155260342 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133 		JBrowse link
G Exosc3 exosome component 3 disease_progression ISO mRNA:altered expression:stomach, tumor (human) RGD PMID:29069277 RGD:151893464 NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit treatment
susceptibility
disease_progression		 ISO DNA:SNPs: :multiple RGD PMID:16734726 PMID:22228224 PMID:25595591 RGD:126779605 RGD:126781698 RGD:14928319 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Fanci FA complementation group I ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:17452773 PMID:17460694 PMID:25741868 PMID:28492532 PMID:28875981 NCBI chrNW_004955416:15,788,812...15,857,933
Ensembl chrNW_004955416:15,788,922...15,853,480 		JBrowse link
G Fbxo11 F-box protein 11 exacerbates ISO protein:increased expression:stomach (human)
mRNA, protein:increased expression:stomach (human)		 RGD PMID:29278851 PMID:31829474 RGD:152025260 RGD:152025261 NCBI chrNW_004955441:14,471,283...14,495,508
Ensembl chrNW_004955441:14,471,283...14,553,916 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 severity ISO protein:increased expression:stomach (human)
ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer		 RGD
ClinVar
OMIM		 PMID:7655462 PMID:7719344 PMID:7773284 PMID:7874170 PMID:7987400 More... RGD:12801419 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 severity
treatment
ameliorates		 ISO DNA:SNP:exon 9: p.G388R (human)
human cells in mouse model
protein:increased expression:stomach, cytoplasm (human)		 RGD PMID:20844967 PMID:21567388 PMID:26432329 PMID:32973082 RGD:150520025 RGD:150520039 RGD:150520068 RGD:150520156 NCBI chrNW_004955408:29,370,480...29,383,531
Ensembl chrNW_004955408:29,370,468...29,383,971 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit ISO DNA:SNP:5' utr (human) RGD PMID:28169308 RGD:153344570 NCBI chrNW_004955422:19,425,741...19,431,801
Ensembl chrNW_004955422:19,423,591...19,433,885 		JBrowse link
G Foxa1 forkhead box A1 ameliorates ISO protein:decreased expression:stomach RGD PMID:29129808 PMID:31046116 RGD:151665744 RGD:151665756 NCBI chrNW_004955409:23,598,127...23,599,827
Ensembl chrNW_004955409:23,598,127...23,599,461 		JBrowse link
G Foxm1 forkhead box M1 severity ISO protein:increased expression:stomach (human) RGD PMID:25482013 RGD:151356929 NCBI chrNW_004955429:18,392,545...18,405,254
Ensembl chrNW_004955429:18,393,470...18,405,254 		JBrowse link
G Fubp1 far upstream element binding protein 1 treatment
disease_progression		 ISO mRNA:increased expression:stomach (human) RGD PMID:24192769 PMID:28667493 RGD:151361189 RGD:151665342 NCBI chrNW_004955423:15,245,645...15,278,628
Ensembl chrNW_004955423:15,245,610...15,278,628 		JBrowse link
G Fut11 fucosyltransferase 11 severity ISO mRNA, protein:increased expression:stomach (human)
human cells in mouse model		 RGD PMID:37483811 RGD:401854242 NCBI chrNW_004955437:18,126,165...18,132,874
Ensembl chrNW_004955437:18,126,167...18,132,805 		JBrowse link
G Gda guanine deaminase ISO protein:increased expression:stomach: RGD PMID:8076377 RGD:152995290 NCBI chrNW_004955434:983,388...1,050,413
Ensembl chrNW_004955434:983,388...1,049,948 		JBrowse link
G Gldc glycine decarboxylase ISO mRNA:decreased expression:stomach: RGD PMID:26722042 RGD:12904663 NCBI chrNW_004955434:10,431,434...10,533,118
Ensembl chrNW_004955434:10,431,983...10,533,002 		JBrowse link
G Gpx1 glutathione peroxidase 1 exacerbates
susceptibility		 ISO protein:decreased expression:stomach (human)
DNA:missense mutation, haplotype:CDS:p.P198L (human)		 RGD PMID:19035188 PMID:22843889 RGD:151665483 RGD:152995456 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Gpx3 glutathione peroxidase 3 disease_progression
treatment
onset
susceptibility		 ISO protein:decreased expression:stomach (human)
DNA:hypermethylation
DNA:SNPs:intron 1,3'utr: (rs3805435, rs3828599, rs2070593) (human)		 RGD PMID:20043075 PMID:20576521 PMID:22843889 PMID:30114685 PMID:30924352 RGD:151665483 RGD:151665486 RGD:151665489 RGD:151665512 RGD:151665514 NCBI chrNW_004955408:2,622,162...2,629,088
Ensembl chrNW_004955408:2,622,741...2,629,032 		JBrowse link
G Grb7 growth factor receptor bound protein 7 ISO mRNA:increased expression:mucosa of stomach (human) RGD PMID:17229543 RGD:151347657 NCBI chrNW_004955451:14,463,032...14,470,392
Ensembl chrNW_004955451:14,464,541...14,474,070 		JBrowse link
G Gse1 Gse1 coiled-coil protein ameliorates
exacerbates
disease_progression		 ISO RGD PMID:29367342 RGD:151361142 NCBI chrNW_004955541:517,715...808,174
Ensembl chrNW_004955541:720,458...808,174 		JBrowse link
G Hdac2 histone deacetylase 2 disease_progression ISO RGD PMID:15865607 PMID:23175521 RGD:9590322 RGD:9590325 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707 		JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955451:7,309,895...7,364,166
Ensembl chrNW_004955451:7,309,895...7,364,172 		JBrowse link
G Hoxb13 homeobox B13 ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:28492532 PMID:36988593 NCBI chrNW_004955451:12,536,415...12,538,169
Ensembl chrNW_004955451:12,536,415...12,538,169 		JBrowse link
G Htra1 HtrA serine peptidase 1 treatment ISO protein:decreased expression:stomach (human) RGD PMID:21447133 PMID:25761858 RGD:11058317 RGD:152977763 NCBI chrNW_004955477:761,127...808,396
Ensembl chrNW_004955477:761,127...808,994 		JBrowse link
G Htra2 HtrA serine peptidase 2 ISO protein:increased expression:gastric mucosa (human) RGD PMID:12887511 RGD:5688748 NCBI chrNW_004955424:11,255,756...11,259,170
Ensembl chrNW_004955424:11,255,756...11,259,170 		JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 disease_progression ISO protein:decreased expression:stomach (human) RGD PMID:25098926 PMID:27466503 RGD:149735569 RGD:149735841 NCBI chrNW_004955416:15,197,611...15,212,919
Ensembl chrNW_004955416:15,197,366...15,223,363 		JBrowse link
G Igfbp3 insulin like growth factor binding protein 3 treatment ISO human cells in mouse model RGD PMID:16052530 RGD:153344579 NCBI chrNW_004955456:6,795,560...6,802,147
Ensembl chrNW_004955456:6,795,604...6,800,845 		JBrowse link
G Il10 interleukin 10 ISO DNA:SNP:promoter:-819C>T (rs1800871) (human) RGD PMID:28002581 PMID:30610790 RGD:14975135 RGD:14975253 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Il1b interleukin 1 beta susceptibility ISO DNA:polymorphism:promoter:-31T>C (human) RGD
OMIM		 PMID:21653279 RGD:7401222 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO OMIM NCBI chrNW_004955470:1,145,022...1,159,413
Ensembl chrNW_004955470:1,144,810...1,159,471 		JBrowse link
G Il5 interleukin 5 susceptibility ISO DNA:SNP::745 C>T (rs2069812)(human) RGD PMID:18687755 RGD:151347690 NCBI chrNW_004955408:3,937,128...3,951,784
Ensembl chrNW_004955408:3,937,894...3,939,358 		JBrowse link
G Il6 interleukin 6 no_association ISO DNA:SNPs: :rs1800796, rs10499563 (human)
human cells in mouse model;associated with mental depression; protein:increased expression:blood serum, stomach (human)
DNA:SNP: :rs2069837 (human)
DNA:SNPs: :rs6949149 (human)		 RGD PMID:27049718 PMID:28442395 PMID:30610790 PMID:31396300 RGD:126908003 RGD:14975253 RGD:14975290 RGD:14975291 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Il6r interleukin 6 receptor ISO DNA:SNP: :rs2228145 (human) RGD PMID:28442395 RGD:14975291 NCBI chrNW_004955545:932,814...979,359
Ensembl chrNW_004955545:950,765...981,762 		JBrowse link
G Il6st interleukin 6 cytokine family signal transducer ISO OMIM:137215 | OMIM:613659 MouseDO NCBI chrNW_004955446:11,790,636...11,837,734
Ensembl chrNW_004955446:11,790,444...11,835,001 		JBrowse link
G Il7r interleukin 7 receptor susceptibility ISO DNA:SNPs,haplotype:IVS,exon:1560 G>A (rs1389832),33 A>G(rs1494555), 1472 A>C (rs1494556)(human) RGD PMID:18687755 RGD:151347690 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Irf1 interferon regulatory factor 1 ISO ClinVar Annotator: match by term: Gastric cancer OMIM
ClinVar		 PMID:9679752 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973 		JBrowse link
G Jak1 Janus kinase 1 severity ISO DNA:frameshift mutations
DNA:SNP: :rs2230587A (human)		 RGD PMID:27049718 PMID:29121062 RGD:14975290 RGD:150524355 NCBI chrNW_004955423:25,501,989...25,581,826
Ensembl chrNW_004955423:25,524,075...25,580,604 		JBrowse link
G Jak2 Janus kinase 2 susceptibility
treatment		 ISO DNA:SNPs:exon, promoter: (rs2230724, rs1887427) (human)
human cells in mouse model
associated with Helicobacter Infections; protein:increased expression:stomach (human)		 RGD PMID:23717640 PMID:24718681 PMID:29408335 PMID:32106377 RGD:126925979 RGD:126928128 RGD:127284846 RGD:127284886 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208 		JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 ISO protein:increased expression:gastric mucosa (human) RGD PMID:16258262 RGD:9686069 NCBI chrNW_004955413:2,835,730...2,838,761
Ensembl chrNW_004955413:2,836,146...2,837,966 		JBrowse link
G Kdm4b lysine demethylase 4B treatment
severity		 ISO human gene in a mouse model
mRNA:increased expression:gastric mucosa (human)		 RGD PMID:22133676 PMID:24077348 RGD:9587739 RGD:9587753 NCBI chrNW_004955495:4,019,066...4,101,577
Ensembl chrNW_004955495:4,018,770...4,114,604 		JBrowse link
G Kdm5c lysine demethylase 5C ISO mRNA:increased expression:stomach (human) RGD PMID:26858085 RGD:151361174 NCBI chrNW_004955475:243,666...278,064
Ensembl chrNW_004955475:243,666...278,627 		JBrowse link
G Kdm6a lysine demethylase 6A exacerbates ISO DNA:mutations:multiple (human) RGD PMID:32867456 RGD:150520203 NCBI chrNW_004955516:3,151,350...3,346,832
Ensembl chrNW_004955516:3,149,948...3,346,832 		JBrowse link
G Kdr kinase insert domain receptor no_association
disease_progression		 ISO DNA:SNPs: :rs7667298, rs2071559, rs2305948 (human)
DNA:SNP: :rs1870377 (human)		 RGD PMID:30380970 RGD:126907999 NCBI chrNW_004955447:15,810,816...15,851,702
Ensembl chrNW_004955447:15,810,815...15,853,583 		JBrowse link
G Kif18a kinesin family member 18A disease_progression ISO RGD PMID:27215532 RGD:11554202 NCBI chrNW_004955476:7,058,682...7,117,496
Ensembl chrNW_004955476:7,058,573...7,109,610 		JBrowse link
G Klf6 KLF transcription factor 6 ISO ClinVar Annotator: match by term: Gastric cancer OMIM
ClinVar		 NCBI chrNW_004955429:1,838,537...1,846,915
Ensembl chrNW_004955429:1,838,537...1,846,915 		JBrowse link
G Kmt2c lysine methyltransferase 2C ISO DNA:SNPs, haplotypes: rs6943984, rs4725443 (human)
DNA:missense mutation:CDS:S3660L (human)		 RGD PMID:23991983 PMID:24965397 RGD:150537042 RGD:150537043 NCBI chrNW_004955491:6,245,408...6,420,535
Ensembl chrNW_004955491:6,247,249...6,402,470 		JBrowse link
G Kmt2d lysine methyltransferase 2D disease_progression ISO protein:increased expression:stomach RGD PMID:30177394 RGD:150521710 NCBI chrNW_004955500:7,850,782...7,891,703
Ensembl chrNW_004955500:7,853,292...7,886,067 		JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Stomach cancer OMIM
ClinVar		 PMID:2278970 PMID:3122217 PMID:7773929 PMID:8439212 PMID:12110640 More... NCBI chrNW_004955413:20,298,852...20,328,756
Ensembl chrNW_004955413:20,298,824...20,328,758 		JBrowse link
G LOC102010850 cytochrome P450 1A1 ISO RGD PMID:16270381 RGD:14700945 NCBI chrNW_004955450:3,183,958...3,189,488
Ensembl chrNW_004955450:3,183,750...3,189,488 		JBrowse link
G LOC102026028 cytochrome P450 2E1 disease_progression ISO RGD PMID:22957075 RGD:14700909 NCBI chrNW_004955507:6,293,162...6,303,255
Ensembl chrNW_004955507:6,289,576...6,304,193 		JBrowse link
G Lrp1b LDL receptor related protein 1B ISO DNA:hypermethylation RGD PMID:20095042 RGD:150429774 NCBI chrNW_004955440:7,048,527...8,475,566
Ensembl chrNW_004955440:7,050,135...8,475,122 		JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955421:9,519,468...9,558,038
Ensembl chrNW_004955421:9,519,468...9,558,038 		JBrowse link
G Lztr1 leucine zipper like post translational regulator 1 disease_progression ISO mRNA:altered expression:stomach, tumor (human) RGD PMID:29069277 RGD:151893464 NCBI chrNW_004955442:19,315,427...19,333,361
Ensembl chrNW_004955442:19,315,427...19,333,522 		JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO mRNA:splice variant:exon 2: (human) RGD PMID:32601196 RGD:155230826 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 exacerbates
susceptibility		 ISO DNA:SNP:enhancer: (rs889312) (human)
DNA:SNP:intron:g.56206570C>G (rs16886448) (human)		 RGD PMID:23042672 PMID:31686841 RGD:150573715 RGD:150573716 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136 		JBrowse link
G Map3k8 mitogen-activated protein kinase kinase kinase 8 ameliorates ISO RGD PMID:23828905 RGD:151356998 NCBI chrNW_004955429:21,717,153...21,739,349
Ensembl chrNW_004955429:21,716,958...21,741,585 		JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 ISO mRNA:increased expression:stomach (human) RGD PMID:26549737 RGD:11538454 NCBI chrNW_004955470:7,334,050...7,470,751
Ensembl chrNW_004955470:7,333,351...7,470,751 		JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member severity ISO protein:increased expression:stomach (human) RGD PMID:25482013 PMID:25672320 PMID:28274596 RGD:151356929 RGD:151356982 RGD:151356999 NCBI chrNW_004955413:238,043...243,317 JBrowse link
G Mki67 marker of proliferation Ki-67 treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chrNW_004955477:5,847,288...5,875,970 JBrowse link
G Mlh1 mutL homolog 1 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:8571956 PMID:9536098 PMID:10471527 PMID:11151427 PMID:12183410 More... NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ameliorates ISO human cells in mouse model RGD PMID:26432329 RGD:150520156 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:8062247 PMID:8261515 PMID:9002677 PMID:9288790 PMID:9634524 More... NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698 		JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:9307272 PMID:9929971 PMID:10471527 PMID:10508506 PMID:11807791 More... NCBI chrNW_004955441:14,451,207...14,471,316
Ensembl chrNW_004955441:14,451,307...14,471,227 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase no_association ISO DNA:missense mutation:cds:g.677C>T (human) RGD PMID:23183616 PMID:24615072 RGD:38501052 RGD:38501056 NCBI chrNW_004955486:2,096,379...2,112,240
Ensembl chrNW_004955486:2,096,379...2,112,240 		JBrowse link
G Mutyh mutY DNA glycosylase ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer OMIM
ClinVar		 PMID:517270 PMID:11092888 PMID:11433026 PMID:11805113 PMID:11818965 More... NCBI chrNW_004955464:12,927,669...12,936,894
Ensembl chrNW_004955464:12,933,497...12,938,468 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor ameliorates
onset		 ISO associated with Helicobacter Infections RGD PMID:23728346 PMID:24166959 RGD:150519913 RGD:150519918 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138 		JBrowse link
G Nbea neurobeachin severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955431:10,379,061...11,017,884
Ensembl chrNW_004955431:10,378,993...11,018,618 		JBrowse link
G Nbn nibrin ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:9590180 PMID:11279524 PMID:12433983 PMID:12708449 PMID:15048089 More... NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO protein:increased expression:stomach (human) RGD PMID:32489143 RGD:153002574 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913 		JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO mRNA:increased expression:stomach RGD PMID:19878654 RGD:28867241 NCBI chrNW_004955402:7,692,009...7,728,876
Ensembl chrNW_004955402:7,691,937...7,729,690 		JBrowse link
G Nf1 neurofibromin 1 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:1568246 PMID:7607663 PMID:7655472 PMID:7904209 PMID:8834249 More... NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO human cells in mouse model; associated with mental depression; protein:increased phosphorylation:stomach (human) RGD PMID:31396300 RGD:126908003 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 ameliorates ISO RGD PMID:30452981 RGD:150519920 NCBI chrNW_004955416:16,652,931...17,018,188
Ensembl chrNW_004955416:16,652,791...17,018,188 		JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex ISO mRNA:increased expression:stomach RGD PMID:19081476 PMID:19878654 RGD:28867241 RGD:28867243 NCBI chrNW_004955462:13,082,874...13,142,709
Ensembl chrNW_004955462:13,082,047...13,142,944 		JBrowse link
G Palb2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:2980694 PMID:16199547 PMID:17200668 PMID:17200671 PMID:17200672 More... NCBI chrNW_004955493:2,149,053...2,175,482
Ensembl chrNW_004955493:2,147,862...2,175,781 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 treatment ISO human cells in a mouse model
human cells in mouse model		 RGD PMID:29408335 PMID:32106377 RGD:127284846 RGD:127284886 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615 		JBrowse link
G Pcna proliferating cell nuclear antigen ameliorates ISO human cells in mouse model RGD PMID:26432329 RGD:150520156 NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673 		JBrowse link
G Pdcd1 programmed cell death 1 disease_progression ISO associated with Epstein-Barr Virus Infections RGD PMID:27465786 PMID:32380498 RGD:40818238 RGD:41410790 NCBI chrNW_004955542:49,290...57,747
Ensembl chrNW_004955542:49,259...58,823 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha disease_progression ISO Epstein-Barr Virus negative patient
ClinVar Annotator: match by term: Stomach cancer
protein:increased expression:stomach (human)
associated with Epstein-Barr Virus Infections; DNA,protein:mutations:exon:		 RGD
ClinVar
OMIM		 PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... RGD:126790641 RGD:40818110 RGD:40818111 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:1992580 PMID:3199258 PMID:7632227 PMID:7661930 PMID:9488480 More... NCBI chrNW_004955460:13,762,854...13,791,462 JBrowse link
G Pot1 protection of telomeres 1 disease_progression ISO RGD PMID:18425352 RGD:151356939 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031 		JBrowse link
G Ppp1r14a protein phosphatase 1 regulatory inhibitor subunit 14A severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955468:1,174,946...1,179,289
Ensembl chrNW_004955468:1,174,961...1,179,207 		JBrowse link
G Ptch1 patched 1 disease_progression
severity		 ISO DNA:hypermethylation:promoter RGD PMID:19673023 PMID:22456124 PMID:23371028 PMID:23440386 RGD:150523836 RGD:150523838 RGD:150523843 RGD:150523844 NCBI chrNW_004955422:22,362,330...22,418,062
Ensembl chrNW_004955422:22,362,221...22,427,622 		JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:1336932 PMID:9140396 PMID:9241266 PMID:9259288 PMID:9399897 More... NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829 		JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO DNA:SNPs::rs12229892, rs2301756(human) RGD PMID:27614952 RGD:39128246 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203 		JBrowse link
G Rac1 Rac family small GTPase 1 exacerbates ISO protein:increased expression:mucosa of stomach (human) RGD PMID:23298303 RGD:153350128 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351 		JBrowse link
G Rad51c RAD51 paralog C ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:122156 PMID:9536098 PMID:12966089 PMID:16199547 PMID:17576681 More... NCBI chrNW_004955451:4,053,195...4,178,226
Ensembl chrNW_004955451:4,145,226...4,178,487 		JBrowse link
G Rad51d RAD51 paralog D ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:10749867 PMID:14704354 PMID:19327148 PMID:20665887 PMID:21111057 More... NCBI chrNW_004955481:9,795,102...9,810,426
Ensembl chrNW_004955481:9,795,102...9,810,426 		JBrowse link
G Rgn regucalcin severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955516:958,416...978,829
Ensembl chrNW_004955516:955,680...978,910 		JBrowse link
G Rictor RPTOR independent companion of MTOR complex 2 severity ISO protein:increased expression:gastric tumor (human)
associated with Lymphatic Metastasis;protein:increased expression:gastric tumor, lymph node (human)		 RGD PMID:26159923 PMID:32588907 RGD:152995444 RGD:152995448 NCBI chrNW_004955426:23,468,112...23,582,587
Ensembl chrNW_004955426:23,468,112...23,582,587 		JBrowse link
G Rnf43 ring finger protein 43 disease_progression ISO mRNA:altered expression:stomach (human) RGD PMID:27006499 PMID:27514024 RGD:11354809 RGD:151361220 NCBI chrNW_004955451:4,604,985...4,680,762
Ensembl chrNW_004955451:4,604,985...4,680,762 		JBrowse link
G Runx3 RUNX family transcription factor 3 disease_progression ISO mRNA:decreased expression:stomach RGD PMID:15386419 RGD:126775146 NCBI chrNW_004955452:4,580,444...4,606,820
Ensembl chrNW_004955452:4,579,331...4,636,884 		JBrowse link
G Setbp1 SET binding protein 1 ISO RGD PMID:27006499 RGD:11354809 NCBI chrNW_004955402:30,380,346...30,738,869
Ensembl chrNW_004955402:30,380,346...30,734,144 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase exacerbates ISO mRNA:decreased expression:stomach (human) RGD PMID:29522714 RGD:150429638 NCBI chrNW_004955420:25,070,626...25,178,410
Ensembl chrNW_004955420:25,090,798...25,177,760 		JBrowse link
G Sgce sarcoglycan epsilon severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955432:11,310,488...11,383,803
Ensembl chrNW_004955432:11,310,129...11,383,803 		JBrowse link
G Shh sonic hedgehog signaling molecule disease_progression ISO RGD PMID:22456124 RGD:150523844 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Slc3a2 solute carrier family 3 member 2 ISO protein:increased expression:stomach (human) RGD PMID:23116296 RGD:152995461 NCBI chrNW_004955599:376,133...391,434
Ensembl chrNW_004955599:376,245...391,311 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 severity ISO protein:increased expression:stomach RGD PMID:23809372 PMID:29367342 RGD:151361142 RGD:151361296 NCBI chrNW_004955541:2,103,437...2,129,668
Ensembl chrNW_004955541:2,103,384...2,130,310 		JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:36988593 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538 		JBrowse link
G Smo smoothened, frizzled class receptor disease_progression
treatment		 ISO mRNA:increased expression:liver RGD PMID:16339184 PMID:28350784 RGD:150340549 RGD:150340550 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:12469139 RGD:1581255 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163 		JBrowse link
G Spop speckle type BTB/POZ protein exacerbates ISO protein:decreased expression:stomach (human) RGD PMID:25204354 RGD:153298922 NCBI chrNW_004955451:11,897,642...11,970,269
Ensembl chrNW_004955451:11,897,592...11,970,269 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO mRNA:increased expression:stomach (human) RGD PMID:20938052 RGD:11038731 NCBI chrNW_004955451:4,992,634...4,996,619
Ensembl chrNW_004955451:4,992,634...4,999,029 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 treatment ISO human cells in mouse model, associated with mental depression; protein:increased phosphorylation:stomach (human) RGD PMID:29408335 PMID:31396300 RGD:126908003 RGD:127284846 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687 		JBrowse link
G Stim1 stromal interaction molecule 1 disease_progression ISO protein:increased expression:stomach (human) RGD PMID:27035326 RGD:152995363 NCBI chrNW_004955414:19,652,990...19,849,353
Ensembl chrNW_004955414:19,652,990...19,847,964 		JBrowse link
G Stk11 serine/threonine kinase 11 ISO ClinVar Annotator: match by term: Gastric cancer ClinVar PMID:15188174 PMID:16287113 PMID:28492532 PMID:30287823 PMID:32980694 More... NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058 		JBrowse link
G Tbx3 T-box transcription factor 3 disease_progression ISO protein:increased expression:stomach (human) RGD PMID:27553355 RGD:151361120 NCBI chrNW_004955455:15,988,153...16,000,156
Ensembl chrNW_004955455:15,988,663...16,000,063 		JBrowse link
G Tep1 telomerase associated protein 1 susceptibility ISO DNA:SNPs:introns:rs1713423,rs1760893(human) RGD PMID:27305982 RGD:152977750 NCBI chrNW_004955550:1,162,067...1,215,746
Ensembl chrNW_004955550:1,162,186...1,215,723 		JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO protein:increased expression:gastric mucosa (human) RGD PMID:20127252 RGD:2317220 NCBI chrNW_004955444:7,103,282...7,149,450
Ensembl chrNW_004955444:7,103,552...7,150,323 		JBrowse link
G Tert telomerase reverse transcriptase ISO mRNA:increased expression:mucosa of stomach RGD PMID:16696344 RGD:152977754 NCBI chrNW_004955504:649,248...669,796
Ensembl chrNW_004955504:651,779...670,589 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 disease_progression
treatment
severity		 ISO mRNA, protein:decreased expression:stomach (human)
human cells in mouse model
associated with Neoplasm Metastasis; human cells in mouse model
mRNA:decreased expression:stomach (human)		 RGD PMID:27027260 PMID:31242038 PMID:33058920 RGD:150429612 RGD:150429653 RGD:150429654 NCBI chrNW_004955496:3,885,684...3,963,056
Ensembl chrNW_004955496:3,885,035...3,926,106 		JBrowse link
G Tff1 trefoil factor 1 ISO OMIM:137215 | OMIM:613659 MouseDO NCBI chrNW_004955407:39,363,693...39,365,724 JBrowse link
G Tmem260 transmembrane protein 260 susceptibility ISO DNA:SNP: 3'UTR:rs4901706 (human) RGD PMID:27602096 RGD:155882453 NCBI chrNW_004955466:10,543,331...10,600,990
Ensembl chrNW_004955466:10,543,331...10,600,990 		JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955402:46,242,329...46,298,157
Ensembl chrNW_004955402:46,264,164...46,296,368 		JBrowse link
G Toe1 target of EGR1, exonuclease ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:14618256 PMID:22473953 PMID:25186627 PMID:25741868 PMID:26467025 More... NCBI chrNW_004955464:12,924,185...12,927,567
Ensembl chrNW_004955464:12,924,191...12,927,567 		JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Gastric cancer | ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:1565143 PMID:1565144 PMID:1591732 PMID:1631137 PMID:1683921 More... NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Tp73 tumor protein p73 exacerbates ISO mRNA:decreased expression:stomach (human) RGD PMID:16190407 RGD:151347595 NCBI chrNW_004955486:7,914,608...7,961,992
Ensembl chrNW_004955486:7,914,440...7,952,982 		JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 severity ISO mRNA:altered expression:stomach tumor (human) RGD PMID:28035468 RGD:152995287 NCBI chrNW_004955508:3,143,868...3,211,613
Ensembl chrNW_004955508:3,143,868...3,211,613 		JBrowse link
G Ttr transthyretin severity ISO protein:decreased expression:blood serum (human) RGD PMID:29804846 RGD:151664603 NCBI chrNW_004955402:18,921,235...18,927,976
Ensembl chrNW_004955402:18,921,274...18,928,108 		JBrowse link
G Txnip thioredoxin interacting protein ISO mRNA:decreased expression:stomach RGD PMID:12553030 RGD:1642760 NCBI chrNW_004955568:103,801...107,791
Ensembl chrNW_004955568:103,762...107,785 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:32934672 RGD:151665189 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005 		JBrowse link
G Xpo1 exportin 1 ameliorates
exacerbates		 ISO protein:increased expression:stomach (human) RGD PMID:27714846 PMID:31569391 RGD:151665793 RGD:151667434 NCBI chrNW_004955424:22,370,006...22,420,568
Ensembl chrNW_004955424:22,370,006...22,420,568 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 susceptibility
ameliorates
treatment
disease_progression		 ISO DNA:SNP:: p.R194W (human)
DNA:missense mutation:CDS:p.R399Q (human)
DNA:missense mutation:cds: p.R194W (human)
DNA:missense mutation:cds: p.R399Q G>A (human)
DNA:SNP:exon 10: p.R399Q, 399G>A(human)
DNA:SNPs:exon 6, exon 10: C>T p.R194W, G>A p.R399Q (human)
DNA:SNPs:exon 9, exon 17: c.910A>G, c.1804C>A (human)
DNA:SNP: 399A>G (human)		 RGD PMID:17593927 PMID:20331623 PMID:21378360 PMID:23604281 PMID:23983608 More... RGD:150530623 RGD:150530625 RGD:150530630 RGD:150530647 RGD:150537038 RGD:150540335 RGD:150573705 RGD:151232294 NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839 		JBrowse link
G Zfp91 ZFP91 zinc finger protein, atypical E3 ubiquitin ligase ameliorates ISO RGD PMID:31046116 RGD:151665744 NCBI chrNW_004955511:3,500,322...3,527,458
Ensembl chrNW_004955511:3,500,406...3,524,479 		JBrowse link
G Zmynd11 zinc finger MYND-type containing 11 ISO mRNA:decreased expression:stomach (human) RGD PMID:34969361 RGD:153344525 NCBI chrNW_004955492:775,501...879,051
Ensembl chrNW_004955492:774,895...879,050 		JBrowse link
cardia cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfr methylenetetrahydrofolate reductase no_association ISO associated with stomach cancer;DNA:missense mutation:cds:g.677C>T (human) RGD PMID:24615072 RGD:38501052 NCBI chrNW_004955486:2,096,379...2,112,240
Ensembl chrNW_004955486:2,096,379...2,112,240 		JBrowse link
diffuse gastric cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc5 ERCC excision repair 5, endonuclease ameliorates ISO mRNA:increased expression:stomach (human) RGD PMID:30417012 RGD:155260342 NCBI chrNW_004955404:8,294,506...8,321,505
Ensembl chrNW_004955404:8,294,346...8,321,112 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 severity ISO DNA:SNP:enhancer: (rs889312) (human) RGD PMID:24759887 RGD:150573718 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136 		JBrowse link
gastric adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 susceptibility ISO DNA:amplification:cds: (human) RGD PMID:27366209 RGD:152995256 NCBI chrNW_004955456:4,977,504...5,341,259
Ensembl chrNW_004955456:4,978,027...5,341,242 		JBrowse link
G Acvr1 activin A receptor type 1 ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:25326637 PMID:26619011 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:17611497 PMID:18256540 PMID:18392055 PMID:18504432 PMID:18611285 More... NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Alx4 ALX homeobox 4 severity ISO RGD PMID:27895854 RGD:153344544 NCBI chrNW_004955422:3,278,615...3,290,799
Ensembl chrNW_004955422:3,278,615...3,291,714 		JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 ISO mRNA:increased expression:serosa of stomach (human) RGD PMID:15107827 RGD:13838842 NCBI chrNW_004955500:6,134,736...6,138,075
Ensembl chrNW_004955500:6,134,736...6,138,075 		JBrowse link
G Apoc1 apolipoprotein C1 ISO protein:decreased expression:serum RGD PMID:21267442 RGD:153344621 NCBI chrNW_004955555:2,005,962...2,007,239 JBrowse link
G Apoc3 apolipoprotein C3 disease_progression ISO protein:decreased expression:serum RGD PMID:21267442 PMID:27002935 RGD:153344621 RGD:153350083 NCBI chrNW_004955412:18,165,667...18,168,015
Ensembl chrNW_004955412:18,165,667...18,168,015 		JBrowse link
G Arid1a AT-rich interaction domain 1A severity
disease_progression
exacerbates		 ISO mRNA:decreased expression:mucosa of stomach (human)
protein:decreased expression:stomach (human)
mRNA, protein:decreased expression:mucosa of stomach (human)		 RGD PMID:22808142 PMID:24293408 PMID:25717252 RGD:125097488 RGD:125097521 RGD:126848753 NCBI chrNW_004955452:6,068,631...6,120,759
Ensembl chrNW_004955452:6,068,631...6,120,759 		JBrowse link
G B2m beta-2-microglobulin ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568 		JBrowse link
G Birc2 baculoviral IAP repeat containing 2 exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:31964418 RGD:153344516 NCBI chrNW_004955412:5,658,322...5,685,628
Ensembl chrNW_004955412:5,659,478...5,685,114 		JBrowse link
G Birc3 baculoviral IAP repeat containing 3 disease_progression ISO mRNA:increased expression:stomach (human) RGD PMID:31964418 RGD:153344516 NCBI chrNW_004955412:5,624,865...5,643,520
Ensembl chrNW_004955412:5,628,973...5,643,410 		JBrowse link
G Birc7 baculoviral IAP repeat containing 7 exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:31964418 RGD:153344516 NCBI chrNW_004955528:919,246...922,581
Ensembl chrNW_004955528:919,246...922,619 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:12068308 PMID:12198537 PMID:12960123 PMID:14679157 PMID:15035987 More... NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Calr calreticulin ameliorates ISO human cell line and construct in a mouse model RGD PMID:25619450 RGD:150521705 NCBI chrNW_004955415:31,985,147...31,989,372
Ensembl chrNW_004955415:31,985,147...31,989,372 		JBrowse link
G Cat catalase ISO protein:decreased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chrNW_004955422:11,783,973...11,826,970
Ensembl chrNW_004955422:11,781,835...11,827,464 		JBrowse link
G Cd44 CD44 molecule (IN blood group) disease_progression ISO mRNA, protein:splice variant, increased expression:stomach RGD PMID:16425351 RGD:2289356 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Cdc73 cell division cycle 73 exacerbates ISO protein:decreased expression:stomach (human) RGD PMID:18080135 RGD:150539445 NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812 		JBrowse link
G Cdh1 cadherin 1 severity ISO mRNA:decreased expression:mucosa of stomach (human)
ClinVar Annotator: match by term: Adenocarcinoma of stomach		 RGD
ClinVar		 PMID:10896919 PMID:11968083 PMID:12588804 PMID:12944922 PMID:14500541 More... RGD:125097521 NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967 		JBrowse link
G Cdk12 cyclin dependent kinase 12 exacerbates ISO protein:increased expression:stomach (human) RGD PMID:31523177 RGD:151361173 NCBI chrNW_004955451:14,244,392...14,345,885
Ensembl chrNW_004955451:14,244,978...14,309,689 		JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:26619011 NCBI chrNW_004955453:14,819,007...14,845,879
Ensembl chrNW_004955453:14,816,910...14,845,912 		JBrowse link
G Crebbp CREB binding protein ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:21390126 PMID:21680795 PMID:21796119 PMID:22832583 PMID:23334668 More... NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004 		JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:9065402 PMID:9065403 PMID:9294210 PMID:9927029 PMID:10027390 More... NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:15457249 PMID:16397024 PMID:16988931 PMID:18339846 PMID:18413839 More... NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:26619011 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25741868 PMID:26619011 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:10766980 PMID:23819449 PMID:25741868 PMID:26619011 PMID:26822237 More... NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:7719344 PMID:8651276 PMID:9002682 PMID:9462761 PMID:9719378 More... NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Gpx1 glutathione peroxidase 1 exacerbates
susceptibility		 ISO protein:decreased expression:mucosa of stomach (human)
mRNA:decreased expression:stomach, erythrocyte, lymphocyte (human)		 RGD PMID:24228025 PMID:27957666 RGD:152995446 RGD:152998894 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Gpx4 glutathione peroxidase 4 susceptibility ISO mRNA:decreased expression:stomach, erythrocyte, lymphocyte (human) RGD PMID:27957666 RGD:152998894 NCBI chrNW_004955495:6,767,969...6,772,256
Ensembl chrNW_004955495:6,767,975...6,772,178 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 severity ISO mRNA:decreased expression:gastric adenocarcinoma (human) RGD PMID:23007704 RGD:9854641 NCBI chrNW_004955408:32,718,736...32,719,409 JBrowse link
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 More... NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333 		JBrowse link
G Il1b interleukin 1 beta ISO protein:increased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Il6 interleukin 6 ISO protein:increased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Irf1 interferon regulatory factor 1 ISO RGD PMID:9679752 RGD:1600013 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:7530509 PMID:9438854 PMID:11073817 PMID:11276010 PMID:11526490 More... NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734 		JBrowse link
G Kmt2d lysine methyltransferase 2D ISO RGD PMID:30177394 RGD:150521710 NCBI chrNW_004955500:7,850,782...7,891,703
Ensembl chrNW_004955500:7,853,292...7,886,067 		JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:2278970 PMID:3122217 PMID:12460918 PMID:15696205 PMID:16361624 More... NCBI chrNW_004955413:20,298,852...20,328,756
Ensembl chrNW_004955413:20,298,824...20,328,758 		JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 More... NCBI chrNW_004955476:11,493,299...11,507,022
Ensembl chrNW_004955476:11,491,688...11,506,700 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:23444215 PMID:25157968 PMID:26619011 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:18042262 PMID:26619011 NCBI chrNW_004955495:4,695,239...4,718,380
Ensembl chrNW_004955495:4,695,768...4,722,098 		JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 severity ISO protein:increased expression:stomach (human)
protein:decreased expression: stomach (human)		 RGD PMID:10854223 PMID:17116802 RGD:150429764 RGD:150429780 NCBI chrNW_004955467:5,188,036...5,295,570
Ensembl chrNW_004955467:5,187,356...5,307,692 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 disease_progression
exacerbates		 ISO mRNA:increased expression:stomach (human) RGD PMID:30238991 PMID:32243890 RGD:151665345 RGD:151665792 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083 		JBrowse link
G Med12 mediator complex subunit 12 ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:26619011 NCBI chrNW_004955475:10,687,168...10,710,286
Ensembl chrNW_004955475:10,687,367...10,710,053 		JBrowse link
G Mlh1 mutL homolog 1 ISO ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:15340264 PMID:17510385 PMID:18307539 PMID:19419416 PMID:22136435 More... NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526 		JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Naip NLR family apoptosis inhibitory protein disease_progression ISO mRNA:increased expression:stomach (human) RGD PMID:31964418 RGD:153344516 NCBI chrNW_004955575:249,659...283,378 JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1654209 PMID:2278970 PMID:2407301 PMID:2674680 PMID:2989702 More... NCBI chrNW_004955435:18,001,517...18,009,105
Ensembl chrNW_004955435:18,001,517...18,009,103 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024 		JBrowse link
G Plce1 phospholipase C epsilon 1 ameliorates ISO human cells in a mouse model RGD PMID:24796667 RGD:151708719 NCBI chrNW_004955507:555,570...825,568
Ensembl chrNW_004955507:555,499...825,568 		JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 ISO mRNA:increased expression:stomach RGD PMID:11568975 RGD:2315108 NCBI chrNW_004955445:1,837,084...1,847,214
Ensembl chrNW_004955445:1,837,062...1,847,214 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25228659 PMID:26619011 PMID:27573199 PMID:28492532 PMID:29352080 NCBI chrNW_004955482:373,467...418,000
Ensembl chrNW_004955482:373,555...417,266 		JBrowse link
G Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:25741868 PMID:26168268 PMID:26619011 PMID:28492532 PMID:31687265 More... NCBI chrNW_004955558:381,794...410,485
Ensembl chrNW_004955558:381,794...410,485 		JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:1945792 PMID:9467011 PMID:9915974 PMID:10866302 PMID:11051241 More... NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829 		JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 PMID:26822237 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203 		JBrowse link
G Ptpn13 protein tyrosine phosphatase non-receptor type 13 disease_progression ISO protein:increased expression:stomach RGD PMID:10660140 PMID:32536826 RGD:152599189 RGD:152975628 NCBI chrNW_004955474:2,988,109...3,140,520
Ensembl chrNW_004955474:2,988,639...3,140,513 		JBrowse link
G Ptpra protein tyrosine phosphatase receptor type A ISO associated with metastasis; protein:increased expression:gastric mucosa (human) RGD PMID:16338072 RGD:151660348 NCBI chrNW_004955415:13,819,934...13,967,068
Ensembl chrNW_004955415:13,819,717...13,967,068 		JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO associated with metastasis; protein:increased expression:gastric mucosa (human) RGD PMID:16338072 RGD:151660348 NCBI chrNW_004955479:3,611,658...3,734,225
Ensembl chrNW_004955479:3,624,993...3,733,183 		JBrowse link
G Rac1 Rac family small GTPase 1 exacerbates ISO protein:increased expression:stomach (human) RGD PMID:23485997 RGD:153300951 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351 		JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1760348 PMID:10064593 PMID:17603482 PMID:17603483 PMID:19568997 More... NCBI chrNW_004955429:17,980,956...18,049,723
Ensembl chrNW_004955429:18,025,932...18,049,723 		JBrowse link
G Rhoa ras homolog family member A ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:26619011 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
G Rnaset2 ribonuclease T2 disease_progression ISO mRNA, protein:decreased expression:stomach (human) RGD PMID:32528897 RGD:153002801 NCBI chrNW_004955439:15,098,210...15,122,015
Ensembl chrNW_004955439:15,098,114...15,125,413 		JBrowse link
G Rnf43 ring finger protein 43 severity ISO human cells in a mouse model RGD PMID:30380024 RGD:151361216 NCBI chrNW_004955451:4,604,985...4,680,762
Ensembl chrNW_004955451:4,604,985...4,680,762 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 susceptibility ISO DNA:amplification:cds: (human) RGD PMID:27366209 RGD:152995256 NCBI chrNW_004955528:531,680...578,003
Ensembl chrNW_004955528:532,385...572,398 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO protein:increased expression:mucosa: RGD PMID:21501294 RGD:151361203 NCBI chrNW_004955541:2,103,437...2,129,668
Ensembl chrNW_004955541:2,103,384...2,130,310 		JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:6604412 PMID:8898652 PMID:9214508 PMID:9285566 PMID:9582123 More... NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:33042401 RGD:153298934 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762 		JBrowse link
G Stat2 signal transducer and activator of transcription 2 ISO mRNA:increased expression:stomach (human) RGD PMID:33042401 RGD:153298934 NCBI chrNW_004955458:3,953,019...3,973,151
Ensembl chrNW_004955458:3,952,738...3,970,668 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO mRNA:increased expression:stomach (human) RGD PMID:33042401 RGD:153298934 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687 		JBrowse link
G Stat4 signal transducer and activator of transcription 4 ISO mRNA:increased expression:stomach (human) RGD PMID:33042401 RGD:153298934 NCBI chrNW_004955403:8,061,471...8,144,252
Ensembl chrNW_004955403:8,061,471...8,144,276 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:33042401 RGD:153298934 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:33042401 RGD:153298934 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 exacerbates ISO mRNA:increased expression:stomach (human) RGD PMID:33042401 RGD:153298934 NCBI chrNW_004955458:4,833,417...4,847,956
Ensembl chrNW_004955458:4,833,515...4,843,273 		JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach | ClinVar Annotator: match by term: Gastric adenocarcinoma ClinVar PMID:124622 PMID:1349175 PMID:1565143 PMID:1565144 PMID:1569604 More... NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ameliorates ISO human cell line in a mouse model RGD PMID:27590582 RGD:151665193 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005 		JBrowse link
G Xiap X-linked inhibitor of apoptosis disease_progression ISO mRNA:increased expression:stomach (human) RGD PMID:31964418 RGD:153344516 NCBI chrNW_004955473:10,823,795...10,878,256
Ensembl chrNW_004955473:10,827,435...10,840,604 		JBrowse link
G Xpo1 exportin 1 ameliorates
exacerbates		 ISO human cell line in a mouse model
protein:decreased expression:stomach (human)		 RGD PMID:28373767 PMID:30115935 RGD:151665802 RGD:151667432 NCBI chrNW_004955424:22,370,006...22,420,568
Ensembl chrNW_004955424:22,370,006...22,420,568 		JBrowse link
Gastric Adenocarcinoma and Proximal Polyposis of the Stomach term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Gastric adenocarcinoma and proximal polyposis of the stomach OMIM
ClinVar		 PMID:1316610 PMID:1324223 PMID:1944466 PMID:2996804 PMID:8381579 More... NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832 		JBrowse link
gastric body carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:20127025 RGD:9589084 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301 		JBrowse link
gastric cardia adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin disease_progression ISO RGD PMID:15585392 RGD:11035298 NCBI chrNW_004955447:9,327...21,212 JBrowse link
G Xrcc1 X-ray repair cross complementing 1 susceptibility ISO DNA:SNP:cds: p.R399Q (human) RGD PMID:16890595 RGD:150530492 NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839 		JBrowse link
gastric cardia carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xrcc1 X-ray repair cross complementing 1 susceptibility ISO DNA:SNP::p.R194W (human) RGD PMID:20863780 RGD:150530627 NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839 		JBrowse link
gastric papillary adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 ISO protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chrNW_004955458:5,181,761...5,193,500
Ensembl chrNW_004955458:5,185,225...5,193,196 		JBrowse link
G Smo smoothened, frizzled class receptor ISO protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
gastric tubular adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 ISO protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chrNW_004955458:5,181,761...5,193,500
Ensembl chrNW_004955458:5,185,225...5,193,196 		JBrowse link
G Smo smoothened, frizzled class receptor ISO protein:increased expression:stomach RGD PMID:17259107 RGD:150340552 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
hereditary diffuse gastric cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 ISO ClinVar Annotator: match by term: CDH1-related diffuse gastric and lobular breast cancer syndrome | ClinVar Annotator: match by term: DIFFUSE GASTRIC AND LOBULAR BREAST CANCER SYNDROME | ClinVar Annotator: match by term: Diffuse gastric and lobular breast cancer syndrome with cleft lip and with or without cleft palate | ClinVar Annotator: match by term: Hereditary diffuse gastric cancer OMIM
ClinVar		 PMID:1722187 PMID:2317870 PMID:2403327 PMID:2449335 PMID:3028782 More... NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967 		JBrowse link
G Cdh3 cadherin 3 ISO ClinVar Annotator: match by term: Hereditary diffuse gastric cancer ClinVar PMID:28492532 NCBI chrNW_004955484:7,937,847...7,985,418
Ensembl chrNW_004955484:7,938,495...7,986,231 		JBrowse link
G Ctnna1 catenin alpha 1 ISO ClinVar Annotator: match by term: Hereditary diffuse gastric cancer ClinVar PMID:25741868 PMID:26182300 PMID:26689913 PMID:28492532 PMID:30515673 More... NCBI chrNW_004955418:1,592,555...1,754,423
Ensembl chrNW_004955418:1,592,229...1,754,689 		JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Hereditary diffuse gastric cancer ClinVar PMID:12110640 PMID:14982869 PMID:16474404 PMID:16474405 PMID:16773572 More... NCBI chrNW_004955413:20,298,852...20,328,756
Ensembl chrNW_004955413:20,298,824...20,328,758 		JBrowse link
linitis plastica term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psca prostate stem cell antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18488030 NCBI chrNW_004955454:1,425,255...1,429,786
Ensembl chrNW_004955454:1,425,255...1,429,786 		JBrowse link
stomach carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A disease_progression ISO protein:decreased expression:stomach (human) RGD PMID:24767857 RGD:125097484 NCBI chrNW_004955452:6,068,631...6,120,759
Ensembl chrNW_004955452:6,068,631...6,120,759 		JBrowse link
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 ISO RGD PMID:23722107 RGD:14700649 NCBI chrNW_004955417:27,340,916...27,376,541
Ensembl chrNW_004955417:27,356,483...27,375,747 		JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding disease_progression ISO RGD PMID:23935945 RGD:153350143 NCBI chrNW_004955573:902,153...910,481
Ensembl chrNW_004955573:899,798...912,272 		JBrowse link
G Bcor BCL6 corepressor disease_progression ISO RGD PMID:27313181 RGD:150340706 NCBI chrNW_004955566:1,412,540...1,510,339
Ensembl chrNW_004955566:1,412,540...1,457,329 		JBrowse link
G Brca1 BRCA1 DNA repair associated disease_progression ISO RGD PMID:23569343 RGD:9589059 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528 		JBrowse link
G Cblb Cbl proto-oncogene B severity
disease_progression		 ISO RGD PMID:20038312 PMID:28334634 RGD:150540337 RGD:150540338 NCBI chrNW_004955427:6,601,651...6,812,896
Ensembl chrNW_004955427:6,604,820...6,812,882 		JBrowse link
G Cbx7 chromobox 7 ISO mRNA:decreased expression:stomach: RGD PMID:22041561 RGD:9587355 NCBI chrNW_004955413:25,079,627...25,100,039
Ensembl chrNW_004955413:25,086,186...25,100,039 		JBrowse link
G Ccnd2 cyclin D2 severity
disease_progression		 ISO RGD PMID:9778110 PMID:14612939 RGD:151665142 RGD:151665349 NCBI chrNW_004955413:2,083,351...2,108,450
Ensembl chrNW_004955413:2,083,351...2,103,430 		JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A disease_progression ISO RGD PMID:11745255 RGD:8662389 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479 		JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 susceptibility ISO associated with Helicobacter Infections;DNA:SNP:promoter: -251T>A (rs4073) (human) RGD PMID:31522447 RGD:40925938 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 disease_progression ISO RGD PMID:21709195 RGD:126781768 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 disease_progression ISO RGD PMID:21709195 RGD:126781768 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 disease_progression ISO RGD PMID:21709195 RGD:126781768 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 treatment ISO human cell line in a mouse model RGD PMID:31255687 RGD:155663557 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Gpx1 glutathione peroxidase 1 exacerbates ISO protein:decreased expression:stomach (human) RGD PMID:8001233 RGD:152023661 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Grb7 growth factor receptor bound protein 7 ISO mRNA:increased expression:stomach (human) RGD PMID:9125150 RGD:151347662 NCBI chrNW_004955451:14,463,032...14,470,392
Ensembl chrNW_004955451:14,464,541...14,474,070 		JBrowse link
G Kdm4a lysine demethylase 4A severity ISO mRNA, protein:increased expression:gastric mucosa (human) RGD PMID:24802408 RGD:9587437 NCBI chrNW_004955537:3,199,394...3,255,945
Ensembl chrNW_004955537:3,199,394...3,255,945 		JBrowse link
G Kdm4c lysine demethylase 4C severity ISO protein:increased expression:stomach (human) RGD PMID:24418035 RGD:9588260 NCBI chrNW_004955434:10,646,524...11,000,589
Ensembl chrNW_004955434:10,685,704...11,000,644 		JBrowse link
G Kdm5a lysine demethylase 5A ISO mRNA:increased expression:stomach (human) RGD PMID:23794145 RGD:9588529 NCBI chrNW_004955454:6,774,308...6,865,047
Ensembl chrNW_004955454:6,774,476...6,865,033 		JBrowse link
G Kmt2c lysine methyltransferase 2C severity ISO protein:decreased expression:stomach (human) RGD PMID:25222251 RGD:9588234 NCBI chrNW_004955491:6,245,408...6,420,535
Ensembl chrNW_004955491:6,247,249...6,402,470 		JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO gastric cancer, OMIM:137215 DNA:point_mutation:CDS:amino acid G12S RGD PMID:7773929 RGD:1600468 NCBI chrNW_004955413:20,298,852...20,328,756
Ensembl chrNW_004955413:20,298,824...20,328,758 		JBrowse link
G Letmd1 LETM1 domain containing 1 ISO mRNA, protein:increased expression:stomach RGD PMID:12879013 RGD:2314918 NCBI chrNW_004955547:1,574,210...1,586,432
Ensembl chrNW_004955547:1,574,265...1,582,786 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 severity ISO protein:decreased expression:stomach (human) RGD PMID:23569343 RGD:9589059 NCBI chrNW_004955583:688,288...722,393 JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO mRNA, protein:increased expression, increased activity:stomach RGD PMID:20434464 RGD:2325777 NCBI chrNW_004955433:13,024,844...13,050,041
Ensembl chrNW_004955433:13,024,418...13,052,775 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO mRNA, protein:increased expression, increased activity:stomach RGD PMID:20434464 RGD:2325777 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G Mutyh mutY DNA glycosylase ISO RGD PMID:15273732 RGD:1600201 NCBI chrNW_004955464:12,927,669...12,936,894
Ensembl chrNW_004955464:12,933,497...12,938,468 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 susceptibility ISO DNA:snp:cds:p.V762A rs1136410 (human) RGD PMID:18716896 RGD:5683907 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615 		JBrowse link
G Rnf43 ring finger protein 43 exacerbates ISO protein:decreased expression:stomach (human)
DNA:mutations:multiple: (human)		 RGD PMID:24816253 PMID:26184844 RGD:11086719 RGD:151665118 NCBI chrNW_004955451:4,604,985...4,680,762
Ensembl chrNW_004955451:4,604,985...4,680,762 		JBrowse link
G Slc3a2 solute carrier family 3 member 2 disease_progression ISO mRNA:increased expression:stomach (human) RGD PMID:29179459 RGD:152995459 NCBI chrNW_004955599:376,133...391,434
Ensembl chrNW_004955599:376,245...391,311 		JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO mRNA:increased expression:stomach mucosa RGD PMID:12359048 RGD:2300058 NCBI chrNW_004955408:6,100,123...6,122,460
Ensembl chrNW_004955408:6,099,003...6,122,459 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 severity ISO mRNA:decreased expression:stomach (human) RGD PMID:16273651 RGD:1581312 NCBI chrNW_004955416:7,715,536...7,728,759
Ensembl chrNW_004955416:7,715,536...7,729,158 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO mRNA,protein:increased expression:stomach (human) RGD PMID:31153693 RGD:151347607 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
G Xpo1 exportin 1 exacerbates ISO protein:increased expression:stomach (human) RGD PMID:24026662 RGD:151667437 NCBI chrNW_004955424:22,370,006...22,420,568
Ensembl chrNW_004955424:22,370,006...22,420,568 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 onset ISO DNA:SNP::p.R194W (human) RGD PMID:20863780 RGD:150530627 NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14316
    disease of anatomical entity 14023
      gastrointestinal system disease 6089
        Gastrointestinal Neoplasms 3303
          gastrointestinal system cancer 2593
            stomach cancer 266
              cardia cancer + 3
              diffuse gastric cancer + 6
              gastric fundus cancer + 0
              gastric gastrinoma 0
              gastric leiomyosarcoma 0
              gastric liposarcoma 0
              gastric lymphoma 0
              gastric teratoma + 0
              malignant gastric germ cell tumor + 0
              malignant gastric granular cell tumor 0
              pylorus cancer + 0
              stomach carcinoma + 108
Path 2
Term Annotations click to browse term
  disease 14316
    disease of cellular proliferation 6918
      Neoplasms by Site 6426
        Digestive System Neoplasms 3412
          Gastrointestinal Neoplasms 3303
            gastrointestinal system cancer 2593
              stomach cancer 266
                cardia cancer + 3
                diffuse gastric cancer + 6
                gastric fundus cancer + 0
                gastric gastrinoma 0
                gastric leiomyosarcoma 0
                gastric liposarcoma 0
                gastric lymphoma 0
                gastric teratoma + 0
                malignant gastric germ cell tumor + 0
                malignant gastric granular cell tumor 0
                pylorus cancer + 0
                stomach carcinoma + 108
paths to the root