Map4k4 (mitogen-activated protein kinase kinase kinase kinase 4) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Map4k4 (mitogen-activated protein kinase kinase kinase kinase 4) Chinchilla lanigera
Analyze
Symbol: Map4k4
Name: mitogen-activated protein kinase kinase kinase kinase 4
RGD ID: 8822074
Description: ENCODES a protein that exhibits ATP binding (ortholog); creatine kinase activity (ortholog); microtubule binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); microvillus assembly (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554707,333,351 - 7,470,751 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Map4k4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554707,333,351 - 7,470,751 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBIChiLan1.0ChiLan1.0
MAP4K4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2101,696,850 - 101,894,689 (+)EnsemblGRCh38hg38GRCh38
GRCh382101,697,707 - 101,894,690 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372102,314,169 - 102,511,152 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362101,680,920 - 101,877,584 (+)NCBINCBI36hg18NCBI36
Build 342101,773,005 - 101,969,669NCBI
Celera296,515,852 - 96,712,368 (+)NCBI
Cytogenetic Map2q11.2NCBI
HuRef296,077,883 - 96,275,019 (+)NCBIHuRef
CHM1_12102,318,538 - 102,515,492 (+)NCBICHM1_1
Map4k4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39139,939,806 - 40,065,470 (+)NCBIGRCm39mm39
GRCm39 Ensembl139,940,073 - 40,065,470 (+)Ensembl
GRCm38139,900,902 - 40,026,310 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl139,900,913 - 40,026,310 (+)EnsemblGRCm38mm10GRCm38
MGSCv37139,957,758 - 40,083,155 (+)NCBIGRCm37mm9NCBIm37
MGSCv36139,845,776 - 39,969,471 (+)NCBImm8
Celera139,697,172 - 39,822,126 (+)NCBICelera
Cytogenetic Map1BNCBI
Map4k4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2942,200,708 - 42,326,708 (+)NCBI
Rnor_6.0 Ensembl946,657,575 - 46,782,545 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0946,657,444 - 46,782,545 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0946,342,983 - 46,469,618 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4939,087,924 - 39,213,053 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1939,072,258 - 39,212,860 (+)NCBI
Celera939,949,780 - 40,073,740 (+)NCBICelera
Cytogenetic Map9q22NCBI
MAP4K4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A102,752,617 - 102,945,263 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A102,750,221 - 102,945,263 (+)Ensemblpanpan1.1panPan2
MAP4K4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11041,088,020 - 41,276,801 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1041,089,371 - 41,276,891 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1041,011,441 - 41,202,508 (-)NCBI
ROS_Cfam_1.01041,953,205 - 42,144,746 (-)NCBI
UMICH_Zoey_3.11041,668,761 - 41,859,816 (-)NCBI
UNSW_CanFamBas_1.01041,948,929 - 42,139,431 (-)NCBI
UU_Cfam_GSD_1.01042,140,514 - 42,331,820 (-)NCBI
Map4k4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629290,518,662 - 90,617,516 (-)NCBI
SpeTri2.0NW_004936713515,388 - 616,024 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP4K4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl352,484,274 - 52,649,410 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1352,483,028 - 52,649,480 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2355,031,486 - 55,196,190 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP4K4
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1145,391,416 - 5,579,163 (+)NCBI
ChlSab1.1 Ensembl145,391,449 - 5,583,916 (+)Ensembl
Map4k4
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247496,332,686 - 6,495,942 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013522767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013522786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGCD01052796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01052797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBBH01143065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBCB01058611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCLAT00000013175   ⟹   ENSCLAP00000013025
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554707,333,351 - 7,469,342 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013176   ⟹   ENSCLAP00000013026
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554707,333,351 - 7,469,342 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013177   ⟹   ENSCLAP00000013027
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554707,334,034 - 7,470,751 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013178   ⟹   ENSCLAP00000013028
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554707,334,034 - 7,470,751 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013179   ⟹   ENSCLAP00000013029
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554707,334,050 - 7,469,339 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013180   ⟹   ENSCLAP00000013030
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554707,334,050 - 7,469,339 (+)Ensembl
RefSeq Acc Id: XM_013522767   ⟹   XP_013378221
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522768   ⟹   XP_013378222
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522769   ⟹   XP_013378223
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522770   ⟹   XP_013378224
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522771   ⟹   XP_013378225
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522772   ⟹   XP_013378226
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522773   ⟹   XP_013378227
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522774   ⟹   XP_013378228
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522775   ⟹   XP_013378229
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522776   ⟹   XP_013378230
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522777   ⟹   XP_013378231
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522778   ⟹   XP_013378232
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522779   ⟹   XP_013378233
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522780   ⟹   XP_013378234
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522781   ⟹   XP_013378235
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522782   ⟹   XP_013378236
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522783   ⟹   XP_013378237
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522784   ⟹   XP_013378238
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522785   ⟹   XP_013378239
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522786   ⟹   XP_013378240
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,334,050 - 7,470,751 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_013378221   ⟸   XM_013522767
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378225   ⟸   XM_013522771
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013378228   ⟸   XM_013522774
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_013378222   ⟸   XM_013522768
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013378229   ⟸   XM_013522775
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_013378224   ⟸   XM_013522770
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013378223   ⟸   XM_013522769
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013378230   ⟸   XM_013522776
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_013378235   ⟸   XM_013522781
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_013378227   ⟸   XM_013522773
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_013378234   ⟸   XM_013522780
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_013378226   ⟸   XM_013522772
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_013378232   ⟸   XM_013522778
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_013378238   ⟸   XM_013522784
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_013378233   ⟸   XM_013522779
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_013378239   ⟸   XM_013522785
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_013378231   ⟸   XM_013522777
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_013378236   ⟸   XM_013522782
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_013378237   ⟸   XM_013522783
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_013378240   ⟸   XM_013522786
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: ENSCLAP00000013025   ⟸   ENSCLAT00000013175
RefSeq Acc Id: ENSCLAP00000013026   ⟸   ENSCLAT00000013176
RefSeq Acc Id: ENSCLAP00000013027   ⟸   ENSCLAT00000013177
RefSeq Acc Id: ENSCLAP00000013028   ⟸   ENSCLAT00000013178
RefSeq Acc Id: ENSCLAP00000013029   ⟸   ENSCLAT00000013179
RefSeq Acc Id: ENSCLAP00000013030   ⟸   ENSCLAT00000013180


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008989 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000013026 ENTREZGENE
  ENSCLAP00000013027 ENTREZGENE
  ENSCLAP00000013028 ENTREZGENE
  ENSCLAP00000013029 ENTREZGENE
  ENSCLAP00000013030 ENTREZGENE
Ensembl Transcript ENSCLAT00000013176 ENTREZGENE
  ENSCLAT00000013177 ENTREZGENE
  ENSCLAT00000013178 ENTREZGENE
  ENSCLAT00000013179 ENTREZGENE
  ENSCLAT00000013180 ENTREZGENE
NCBI Gene Map4k4 ENTREZGENE