Pot1 (protection of telomeres 1) - Rat Genome Database

Name: Pot1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Pot1 (protection of telomeres 1) Chinchilla lanigera

Analyze

Symbol:

Pot1

Name:

protection of telomeres 1

RGD ID:

8705185

Description:

ENCODES a protein that exhibits 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); DEAD/H-box RNA helicase binding (ortholog); G-rich single-stranded DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); DNA duplex unwinding (ortholog); establishment of protein localization to telomere (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); Cerebroretinal Microangiopathy with Calcifications and Cysts 3 (ortholog); cholecystitis (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear telomere cap complex (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

protection of telomeres protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955479	6,140,501 - 6,209,031 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955479	6,140,599 - 6,230,512 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

aplastic anemia (ISO)

Cerebroretinal Microangiopathy with Calcifications and Cysts 3 (ISO)

cholecystitis (ISO)

chromosomal disease (ISO)

Chromosome Aberrations (ISO)

colorectal cancer (ISO)

dyskeratosis congenita (ISO)

dysplastic nevus syndrome (ISO)

familial melanoma (ISO)

glioblastoma (ISO)

hepatocellular carcinoma (ISO)

Hereditary Neoplastic Syndromes (ISO)

high grade glioma (ISO)

high-grade astrocytoma with piloid features (ISO)

Hoyeraal Hreidarsson Syndrome (ISO)

lung cancer (ISO)

lymphoid leukemia (ISO)

melanoma (ISO)

ovarian cancer (ISO)

pleomorphic xanthoastrocytoma (ISO)

Pulmonary Fibrosis and/or Bone Marrow Failure Syndrome, Telomere-Related, 8 (ISO)

skin melanoma (ISO)

Skin Neoplasms (ISO)

stomach cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromosome organization (ISO)

DNA duplex unwinding (ISO)

establishment of protein localization to telomere (ISO)

negative regulation of telomere maintenance via telomerase (ISO)

positive regulation of DNA helicase activity (ISO)

positive regulation of DNA strand elongation (ISO)

positive regulation of helicase activity (ISO)

positive regulation of telomere maintenance via telomerase (ISO)

regulation of DNA helicase activity (ISO)

regulation of double-strand break repair via nonhomologous end joining (ISO)

regulation of telomere maintenance via telomerase (ISO)

telomere assembly (ISO)

telomere capping (ISO)

telomere maintenance via telomerase (ISO)

telomeric D-loop disassembly (ISO)

telomeric loop formation (ISO)

Cellular Component

chromosome, telomeric region (ISO)

nuclear telomere cap complex (ISO)

nucleoplasm (ISO)

shelterin complex (ISO)

Molecular Function

8-hydroxy-2'-deoxyguanosine DNA binding (ISO)

DEAD/H-box RNA helicase binding (ISO)

G-rich single-stranded DNA binding (ISO)

G-rich strand telomeric DNA binding (ISO)

protein binding (ISO)

single-stranded telomeric DNA binding (ISO)

telomerase inhibitor activity (ISO)

telomeric D-loop binding (ISO)

telomeric DNA binding (ISO)

telomeric G-quadruplex DNA binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Pot1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955479	6,140,501 - 6,209,031 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955479	6,140,599 - 6,230,512 (-)	NCBI	ChiLan1.0	ChiLan1.0

POT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	124,822,386 - 124,929,825 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	124,822,386 - 124,929,983 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	124,462,440 - 124,569,879 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	124,249,676 - 124,357,273 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	124,057,263 - 124,131,201	NCBI
Celera	7	119,267,687 - 119,375,230 (-)	NCBI		Celera
Cytogenetic Map	7	q31.33	NCBI
HuRef	7	118,827,419 - 118,935,017 (-)	NCBI		HuRef
CHM1_1	7	124,395,753 - 124,503,350 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	126,139,780 - 126,247,229 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	123,851,834 - 123,959,412 (-)	NCBI

Pot1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	25,743,939 - 25,809,280 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	25,743,736 - 25,809,245 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	25,743,940 - 25,809,277 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	25,743,737 - 25,809,246 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	25,693,735 - 25,759,226 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	25,693,745 - 25,759,236 (-)	NCBI		MGSCv36	mm8
Celera	6	25,744,313 - 25,810,007 (-)	NCBI		Celera
Cytogenetic Map	6	A3.1	NCBI
cM Map	6	11.65	NCBI

Pot1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	55,170,821 - 55,228,588 (-)	NCBI		GRCr8
mRatBN7.2	4	54,205,330 - 54,263,137 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	54,205,332 - 54,263,042 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	59,206,940 - 59,263,878 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	55,120,524 - 55,177,464 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	53,525,039 - 53,581,975 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	51,888,632 - 51,946,764 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	51,888,634 - 51,946,715 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	51,664,672 - 51,722,749 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	52,233,404 - 52,289,574 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	49,343,691 - 49,398,232 (-)	NCBI		Celera
Cytogenetic Map	4	q22	NCBI

POT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	161,671,016 - 161,789,306 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	13,677,851 - 13,799,556 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	116,807,913 - 116,926,998 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	129,487,571 - 129,605,558 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	129,487,571 - 129,605,558 (-)	Ensembl	panpan1.1		panPan2

POT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	10,987,385 - 11,067,473 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	10,987,494 - 11,066,956 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	10,683,957 - 10,766,907 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	10,769,382 - 10,849,644 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	10,769,491 - 10,849,644 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	10,960,833 - 11,041,479 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	10,693,633 - 10,773,611 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	10,852,699 - 10,933,293 (+)	NCBI		UU_Cfam_GSD_1.0

Pot1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	51,284,826 - 51,367,106 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936605	836,769 - 920,201 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936605	836,824 - 919,099 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	22,885,749 - 22,981,890 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	22,885,704 - 22,981,893 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	24,394,687 - 24,526,564 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	93,572,139 - 93,688,374 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	93,571,272 - 93,655,869 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	9,761,660 - 9,885,572 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pot1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624783	11,138,303 - 11,223,044 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624783	11,138,222 - 11,223,329 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005402344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005402345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005402346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001230883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01056377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01056378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01056379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01156854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000006394 ⟹ ENSCLAP00000006290

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955479	6,140,501 - 6,209,031 (-)	Ensembl

RefSeq Acc Id:

XM_005402344 ⟹ XP_005402401

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955479	6,140,599 - 6,227,893 (-)	NCBI

Sequence:

show sequence

GTTGTCATCATACATTAAGGAAAGATGGAAGAATTAAAGAATATGCAGAGCAGAAGGCATTAGT
GGCACTGTTATTACTCACAGATGACCTTACCGTACATGTGAACAATCTCAAGTCATCTGTGGAA
AAATGACACTGTTGCAGTGGCTGGATTTATTTTGTCAGCATCTCGAAGATGGTAAACATTAAAA
CCATTTGAAGACTTCGATTTTTTGTATTTATATTATCTCTGTAAGAGATTTTGCCAAAGGATCA
ATGTCTTCGGTTTCAGTGGCAAATTATACATATACACCCTTGAATCAACTTAAGGGTGGTACAG
TTGTCAATGTCTATGGTGTTGTGAAGTTCTTTAAGCCCCCATATCTAAGCAAAGGAACTGATTA
CTGCTCGGTTGTAACAATTGCGGACCAAACAAATGTGAAGTTAACTTGCCTTCTGTTTAGTGGA
AACTATGAAGCCCTTCCACAAATTTATAAAGTTGGAGACATCGTTCGCTTTCACAGACTAAAGA
TCCAAGTATATAAAAATGAGCCTCAGGGTATCACCAGCTCTGGATTTGCATCTTTGACATTTGA
GGGAACCTTGGGAGCTCCTGTCTTACCTCGTACTTCAAGCAAGTATTTTCACTTCACTGATGCA
GACCATAAAATGGTAGAAGCCTTACGAATTTGGGCATCTACACACATTCCACCTTCTTCAACAT
TAGTGCAGTTGTATGATGTTCAGCCAATGCAGTATTTTGACCTGACTTGTCAGCTCTTGGGCAA
AGCACAAGTAGATGGAGCATCATTTCTACTAAAGGTATGGGATGGCACCAGGACACCCTTTCCA
TCTTGGAGAGTCTTAATAGAAAACGAGGTTCTTGAAGGGGACCTAAGTCACATTCGTCGGCTAC
AGAATCTTACAGTAGACATTTTAGTCTACGATAACCATGTTCAAGTGGCAAAGTCCCTGAAGGT
TGGGAGCTTTCTTAGAATCTACAGCCTCCATACCAAACTGCAGTCAGTGTCTTCTGAAAGCCAG
GCATCATTAAGCCTGGAGTTTCATCTCCATGGAGGCACCAGCTATGGGCGGGGAATCACAGTCT
TACCGGAAAGTAATTCTGATGTGGAGCAGCTGAAGAAAGATTTACAGTCTGCAGATTTGGCAGC
CCCTCAGCATTCAGACGGCATCTGTCAATCAGACCACGAGGACAGCTTTCTCACCCTTTCAAGC
TCTGGATCAGTGTCACTGTGTGAGGTAGAAAGATGTCAACAACTGTCGGCTACAATACTTACTG
ACCATCACTATTTGGAGAAGACACCATTATGTGCTATTCTGAAACAAAAAGCTCCTCAGCAATA
CCGAATCCGAGCAAAACTAAGATCATATAAGCCCAAAGGACTTTTTCAATCTGTAAAACTTTAT
TGTCCTAAATGTCATTCTCTGCAAGAAGTTCCACATGAGAACGATTTGGATATAATTTTAAGAG
ATGGAGCAAGTAAAACTCCAGATACCAAATTACAAAATACGCCCTTATATGATTCAGAAGTCTG
GAGCACGGAGGATCAGGGAGGACGAAAAGTTGTGACTCATTTTGTAAAACGTAACGGTGTTCTC
CCACTTTCAAGTGTGTGTCTCATTTTGATAGAAGGAGGTACACTTGGTGAAATCTGTAAACTTT
CAAGTGAGTTTCATAGTATTATTCCTGTAAAATCTGGCCCTGAAGACCTGGAGCTCCTAGACCT
TTCAGTCCCATTCCTTATACAAGGAAGACTGTATCACTATGGGTGTAAGCAATGTTCTAGTTTG
AAACCAATACAAAATTTAAATTCCCTTGTTGGTGAGACATCATGGATTCCTTCTTCTGTGGCAG
AAGCATTGGGTATTGTACCCCTGCAACATGTGTTTGTTATGACATTTACTCTGGATGACGGAAC
AGGAGTATTAGAAGCTTATCTCATGGATTCTGACAGATTCTTCCAGATTCCAGCATCAGAAGTC
CTACTTGATGATAACCTTCAGAGAAGTATGGATTTGATCATGGATATGTTTTGTCCTCCAGGAA
CAAAAATTGATGTGTATCCATGGATGGAGTGTGTTATCAGGTCATATAATGTCACAAATGGAGC
AGAGCAGCAAATTTGCTATCAGATTTTCGACACCACAGTTGCAGAAGATGTTACCTAATATTGC
CTTTCAATTGGCATATGAAACATACTGTAATTGCAGGAAACTTTATTACTTCCCATTAGATTAT
CTTAAAACACCTAATGATAACAGCTAAATACGTCACAATTTTATTTTAACCACAATTTCAGGGT
TTTTTTTAAATACACAGACATTGTGTTACTTTAATGCCTTTTTGTAAATATTTTCAAAATGTTC
TGATTGTGTAAAATGTCCAACATGACTTCCAGAGATTTAAAAAA

hide sequence

RefSeq Acc Id:

XM_005402345 ⟹ XP_005402402

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955479	6,140,599 - 6,212,740 (-)	NCBI

Sequence:

show sequence

TTTCTTACTTAGAATTCAGGACACTGTTGCAGTGGCTGGATTTATTTTGTCAGCATCTCGAAGA
TGGTAAACATTAAAACCATTTGAAGACTTCGATTTTTTGTATTTATATTATCTCTGTAAGAGAT
TTTGCCAAAGGATCAATGTCTTCGGTTTCAGTGGCAAATTATACATATACACCCTTGAATCAAC
TTAAGGGTGGTACAGTTGTCAATGTCTATGGTGTTGTGAAGTTCTTTAAGCCCCCATATCTAAG
CAAAGGAACTGATTACTGCTCGGTTGTAACAATTGCGGACCAAACAAATGTGAAGTTAACTTGC
CTTCTGTTTAGTGGAAACTATGAAGCCCTTCCACAAATTTATAAAGTTGGAGACATCGTTCGCT
TTCACAGACTAAAGATCCAAGTATATAAAAATGAGCCTCAGGGTATCACCAGCTCTGGATTTGC
ATCTTTGACATTTGAGGGAACCTTGGGAGCTCCTGTCTTACCTCGTACTTCAAGCAAGTATTTT
CACTTCACTGATGCAGACCATAAAATGGTAGAAGCCTTACGAATTTGGGCATCTACACACATTC
CACCTTCTTCAACATTAGTGCAGTTGTATGATGTTCAGCCAATGCAGTATTTTGACCTGACTTG
TCAGCTCTTGGGCAAAGCACAAGTAGATGGAGCATCATTTCTACTAAAGGTATGGGATGGCACC
AGGACACCCTTTCCATCTTGGAGAGTCTTAATAGAAAACGAGGTTCTTGAAGGGGACCTAAGTC
ACATTCGTCGGCTACAGAATCTTACAGTAGACATTTTAGTCTACGATAACCATGTTCAAGTGGC
AAAGTCCCTGAAGGTTGGGAGCTTTCTTAGAATCTACAGCCTCCATACCAAACTGCAGTCAGTG
TCTTCTGAAAGCCAGGCATCATTAAGCCTGGAGTTTCATCTCCATGGAGGCACCAGCTATGGGC
GGGGAATCACAGTCTTACCGGAAAGTAATTCTGATGTGGAGCAGCTGAAGAAAGATTTACAGTC
TGCAGATTTGGCAGCCCCTCAGCATTCAGACGGCATCTGTCAATCAGACCACGAGGACAGCTTT
CTCACCCTTTCAAGCTCTGGATCAGTGTCACTGTGTGAGGTAGAAAGATGTCAACAACTGTCGG
CTACAATACTTACTGACCATCACTATTTGGAGAAGACACCATTATGTGCTATTCTGAAACAAAA
AGCTCCTCAGCAATACCGAATCCGAGCAAAACTAAGATCATATAAGCCCAAAGGACTTTTTCAA
TCTGTAAAACTTTATTGTCCTAAATGTCATTCTCTGCAAGAAGTTCCACATGAGAACGATTTGG
ATATAATTTTAAGAGATGGAGCAAGTAAAACTCCAGATACCAAATTACAAAATACGCCCTTATA
TGATTCAGAAGTCTGGAGCACGGAGGATCAGGGAGGACGAAAAGTTGTGACTCATTTTGTAAAA
CGTAACGGTGTTCTCCCACTTTCAAGTGTGTGTCTCATTTTGATAGAAGGAGGTACACTTGGTG
AAATCTGTAAACTTTCAAGTGAGTTTCATAGTATTATTCCTGTAAAATCTGGCCCTGAAGACCT
GGAGCTCCTAGACCTTTCAGTCCCATTCCTTATACAAGGAAGACTGTATCACTATGGGTGTAAG
CAATGTTCTAGTTTGAAACCAATACAAAATTTAAATTCCCTTGTTGGTGAGACATCATGGATTC
CTTCTTCTGTGGCAGAAGCATTGGGTATTGTACCCCTGCAACATGTGTTTGTTATGACATTTAC
TCTGGATGACGGAACAGGAGTATTAGAAGCTTATCTCATGGATTCTGACAGATTCTTCCAGATT
CCAGCATCAGAAGTCCTACTTGATGATAACCTTCAGAGAAGTATGGATTTGATCATGGATATGT
TTTGTCCTCCAGGAACAAAAATTGATGTGTATCCATGGATGGAGTGTGTTATCAGGTCATATAA
TGTCACAAATGGAGCAGAGCAGCAAATTTGCTATCAGATTTTCGACACCACAGTTGCAGAAGAT
GTTACCTAATATTGCCTTTCAATTGGCATATGAAACATACTGTAATTGCAGGAAACTTTATTAC
TTCCCATTAGATTATCTTAAAACACCTAATGATAACAGCTAAATACGTCACAATTTTATTTTAA
CCACAATTTCAGGGTTTTTTTTAAATACACAGACATTGTGTTACTTTAATGCCTTTTTGTAAAT
ATTTTCAAAATGTTCTGATTGTGTAAAATGTCCAACATGACTTCCAGAGATTTAAAAAA

hide sequence

RefSeq Acc Id:

XM_005402346 ⟹ XP_005402403

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955479	6,140,599 - 6,230,395 (-)	NCBI

Sequence:

show sequence

GCTTGGGGGTGTGCGTAAGCAGGGGCTTGATTTGGTGTGGATCAACTTTCGGTGTAGTTGTCGC
TCAGAAGCCCTGCCTAAGTCTCGTTGTCGTGCAGAGCGGTGTTCACCGTTTTCTCTGGGCCGTG
GGCGCGCAGAGGTCGCAGATCCGAGTCCGCGCCCTCTCGGAGCGCAGCGCCCCGGGGCGGTGCG
AGCGCGGGAACGCCCGCGCCGGGCACGGCGTGCGAGCCGGGAGCCTGAACCCGCACTGTGACAC
TGTTGCAGTGGCTGGATTTATTTTGTCAGCATCTCGAAGATGGTAAACATTAAAACCATTTGAA
GACTTCGATTTTTTGTATTTATATTATCTCTGTAAGAGATTTTGCCAAAGGATCAATGTCTTCG
GTTTCAGTGGCAAATTATACATATACACCCTTGAATCAACTTAAGGGTGGTACAGTTGTCAATG
TCTATGGTGTTGTGAAGTTCTTTAAGCCCCCATATCTAAGCAAAGGAACTGATTACTGCTCGGT
TGTAACAATTGCGGACCAAACAAATGTGAAGTTAACTTGCCTTCTGTTTAGTGGAAACTATGAA
GCCCTTCCACAAATTTATAAAGTTGGAGACATCGTTCGCTTTCACAGACTAAAGATCCAAGTAT
ATAAAAATGAGCCTCAGGGTATCACCAGCTCTGGATTTGCATCTTTGACATTTGAGGGAACCTT
GGGAGCTCCTGTCTTACCTCGTACTTCAAGCAAGTATTTTCACTTCACTGATGCAGACCATAAA
ATGGTAGAAGCCTTACGAATTTGGGCATCTACACACATTCCACCTTCTTCAACATTAGTGCAGT
TGTATGATGTTCAGCCAATGCAGTATTTTGACCTGACTTGTCAGCTCTTGGGCAAAGCACAAGT
AGATGGAGCATCATTTCTACTAAAGGTATGGGATGGCACCAGGACACCCTTTCCATCTTGGAGA
GTCTTAATAGAAAACGAGGTTCTTGAAGGGGACCTAAGTCACATTCGTCGGCTACAGAATCTTA
CAGTAGACATTTTAGTCTACGATAACCATGTTCAAGTGGCAAAGTCCCTGAAGGTTGGGAGCTT
TCTTAGAATCTACAGCCTCCATACCAAACTGCAGTCAGTGTCTTCTGAAAGCCAGGCATCATTA
AGCCTGGAGTTTCATCTCCATGGAGGCACCAGCTATGGGCGGGGAATCACAGTCTTACCGGAAA
GTAATTCTGATGTGGAGCAGCTGAAGAAAGATTTACAGTCTGCAGATTTGGCAGCCCCTCAGCA
TTCAGACGGCATCTGTCAATCAGACCACGAGGACAGCTTTCTCACCCTTTCAAGCTCTGGATCA
GTGTCACTGTGTGAGGTAGAAAGATGTCAACAACTGTCGGCTACAATACTTACTGACCATCACT
ATTTGGAGAAGACACCATTATGTGCTATTCTGAAACAAAAAGCTCCTCAGCAATACCGAATCCG
AGCAAAACTAAGATCATATAAGCCCAAAGGACTTTTTCAATCTGTAAAACTTTATTGTCCTAAA
TGTCATTCTCTGCAAGAAGTTCCACATGAGAACGATTTGGATATAATTTTAAGAGATGGAGCAA
GTAAAACTCCAGATACCAAATTACAAAATACGCCCTTATATGATTCAGAAGTCTGGAGCACGGA
GGATCAGGGAGGACGAAAAGTTGTGACTCATTTTGTAAAACGTAACGGTGTTCTCCCACTTTCA
AGTGTGTGTCTCATTTTGATAGAAGGAGGTACACTTGGTGAAATCTGTAAACTTTCAAGTGAGT
TTCATAGTATTATTCCTGTAAAATCTGGCCCTGAAGACCTGGAGCTCCTAGACCTTTCAGTCCC
ATTCCTTATACAAGGAAGACTGTATCACTATGGGTGTAAGCAATGTTCTAGTTTGAAACCAATA
CAAAATTTAAATTCCCTTGTTGGTGAGACATCATGGATTCCTTCTTCTGTGGCAGAAGCATTGG
GTATTGTACCCCTGCAACATGTGTTTGTTATGACATTTACTCTGGATGACGGAACAGGAGTATT
AGAAGCTTATCTCATGGATTCTGACAGATTCTTCCAGATTCCAGCATCAGAAGTCCTACTTGAT
GATAACCTTCAGAGAAGTATGGATTTGATCATGGATATGTTTTGTCCTCCAGGAACAAAAATTG
ATGTGTATCCATGGATGGAGTGTGTTATCAGGTCATATAATGTCACAAATGGAGCAGAGCAGCA
AATTTGCTATCAGATTTTCGACACCACAGTTGCAGAAGATGTTACCTAATATTGCCTTTCAATT
GGCATATGAAACATACTGTAATTGCAGGAAACTTTATTACTTCCCATTAGATTATCTTAAAACA
CCTAATGATAACAGCTAAATACGTCACAATTTTATTTTAACCACAATTTCAGGGTTTTTTTTAA
ATACACAGACATTGTGTTACTTTAATGCCTTTTTGTAAATATTTTCAAAATGTTCTGATTGTGT
AAAATGTCCAACATGACTTCCAGAGATTTAAAAAA

hide sequence

RefSeq Acc Id:

XM_013503293 ⟹ XP_013358747

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955479	6,140,599 - 6,230,512 (-)	NCBI

Sequence:

show sequence

GAGCTTGCACGCATGCGTGCGTGTGACGTCACTGCGCGCCTGTCTGAATTCTTTCTGCTTTTCC
GGGTTCGGGACACTGTTGCAGTGGCTGGATTTATTTTGTCAGCATCTCGAAGATGGTAAACATT
AAAACCATTTGAAGACTTCGATTTTTTGTATTTATATTATCTCTGTAAGAGATTTTGCCAAAGG
ATCAATGTCTTCGGTTTCAGTGGCAAATTATACATATACACCCTTGAATCAACTTAAGGGTGGT
ACAGTTGTCAATGTCTATGGTGTTGTGAAGTTCTTTAAGCCCCCATATCTAAGCAAAGGAACTG
ATTACTGCTCGGTTGTAACAATTGCGGACCAAACAAATGTGAAGTTAACTTGCCTTCTGTTTAG
TGGAAACTATGAAGCCCTTCCACAAATTTATAAAGTTGGAGACATCGTTCGCTTTCACAGACTA
AAGATCCAAGTATATAAAAATGAGCCTCAGGGTATCACCAGCTCTGGATTTGCATCTTTGACAT
TTGAGGGAACCTTGGGAGCTCCTGTCTTACCTCGTACTTCAAGCAAGTATTTTCACTTCACTGA
TGCAGACCATAAAATGGTAGAAGCCTTACGAATTTGGGCATCTACACACATTCCACCTTCTTCA
ACATTAGTGCAGTTGTATGATGTTCAGCCAATGCAGTATTTTGACCTGACTTGTCAGCTCTTGG
GCAAAGCACAAGTAGATGGAGCATCATTTCTACTAAAGGTATGGGATGGCACCAGGACACCCTT
TCCATCTTGGAGAGTCTTAATAGAAAACGAGGTTCTTGAAGGGGACCTAAGTCACATTCGTCGG
CTACAGAATCTTACAGTAGACATTTTAGTCTACGATAACCATGTTCAAGTGGCAAAGTCCCTGA
AGGTTGGGAGCTTTCTTAGAATCTACAGCCTCCATACCAAACTGCAGTCAGTGTCTTCTGAAAG
CCAGGCATCATTAAGCCTGGAGTTTCATCTCCATGGAGGCACCAGCTATGGGCGGGGAATCACA
GTCTTACCGGAAAGTAATTCTGATGTGGAGCAGCTGAAGAAAGATTTACAGTCTGCAGATTTGG
CAGCCCCTCAGCATTCAGACGGCATCTGTCAATCAGACCACGAGGACAGCTTTCTCACCCTTTC
AAGCTCTGGATCAGTGTCACTGTGTGAGGTAGAAAGATGTCAACAACTGTCGGCTACAATACTT
ACTGACCATCACTATTTGGAGAAGACACCATTATGTGCTATTCTGAAACAAAAAGCTCCTCAGC
AATACCGAATCCGAGCAAAACTAAGATCATATAAGCCCAAAGGACTTTTTCAATCTGTAAAACT
TTATTGTCCTAAATGTCATTCTCTGCAAGAAGTTCCACATGAGAACGATTTGGATATAATTTTA
AGAGATGGAGCAAGTAAAACTCCAGATACCAAATTACAAAATACGCCCTTATATGATTCAGAAG
TCTGGAGCACGGAGGATCAGGGAGGACGAAAAGTTGTGACTCATTTTGTAAAACGTAACGGTGT
TCTCCCACTTTCAAGTGTGTGTCTCATTTTGATAGAAGGAGGTACACTTGGTGAAATCTGTAAA
CTTTCAAGTGAGTTTCATAGTATTATTCCTGTAAAATCTGGCCCTGAAGACCTGGAGCTCCTAG
ACCTTTCAGTCCCATTCCTTATACAAGGAAGACTGTATCACTATGGGTGTAAGCAATGTTCTAG
TTTGAAACCAATACAAAATTTAAATTCCCTTGTTGGTGAGACATCATGGATTCCTTCTTCTGTG
GCAGAAGCATTGGGTATTGTACCCCTGCAACATGTGTTTGTTATGACATTTACTCTGGATGACG
GAACAGGAGTATTAGAAGCTTATCTCATGGATTCTGACAGATTCTTCCAGATTCCAGCATCAGA
AGTCCTACTTGATGATAACCTTCAGAGAAGTATGGATTTGATCATGGATATGTTTTGTCCTCCA
GGAACAAAAATTGATGTGTATCCATGGATGGAGTGTGTTATCAGGTCATATAATGTCACAAATG
GAGCAGAGCAGCAAATTTGCTATCAGATTTTCGACACCACAGTTGCAGAAGATGTTACCTAATA
TTGCCTTTCAATTGGCATATGAAACATACTGTAATTGCAGGAAACTTTATTACTTCCCATTAGA
TTATCTTAAAACACCTAATGATAACAGCTAAATACGTCACAATTTTATTTTAACCACAATTTCA
GGGTTTTTTTTAAATACACAGACATTGTGTTACTTTAATGCCTTTTTGTAAATATTTTCAAAAT
GTTCTGATTGTGTAAAATGTCCAACATGACTTCCAGAGATTTAAAAAA

hide sequence

RefSeq Acc Id:

XR_001230883

Type:

NON-CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955479	6,140,865 - 6,230,512 (-)	NCBI

Sequence:

show sequence

GAGCTTGCACGCATGCGTGCGTGTGACGTCACTGCGCGCCTGTCTGAATTCTTTCTGCTTTTCC
GGGTTCGGGACACTGTTGCAGTGGCTGGATTTATTTTGTCAGCATCTCGAAGATGGTAAACATT
AAAACCATTTGAAGACTTCGATTTTTTGTATTTATATTATCTCTGTAAGAGATTTTGCCAAAGG
ATCAATGTCTTCGGTTTCAGTGGCAAATTATACATATACACCCTTGAATCAACTTAAGGGTGGT
ACAGTTGTCAATGTCTATGGTGTTGTGAAGTTCTTTAAGCCCCCATATCTAAGCAAAGGAACTG
ATTACTGCTCGGTTGTAACAATTGCGGACCAAACAAATGTGAAGTTAACTTGCCTTCTGTTTAG
TGGAAACTATGAAGCCCTTCCACAAATTTATAAAGTTGGAGACATCGTTCGCTTTCACAGACTA
AAGATCCAAGTATATAAAAATGAGCCTCAGGGTATCACCAGCTCTGGATTTGCATCTTTGACAT
TTGAGGGAACCTTGGGAGCTCCTGTCTTACCTCGTACTTCAAGCAAGTATTTTCACTTCACTGA
TGCAGACCATAAAATGGTAGAAGCCTTACGAATTTGGGCATCTACACACATTCCACCTTCTTCA
ACATTAGTGCAGTTGTATGATGTTCAGCCAATGCAGTATTTTGACCTGACTTGTCAGCTCTTGG
GCAAAGCACAAGTAGATGGAGCATCATTTCTACTAAAGGTATGGGATGGCACCAGGACACCCTT
TCCATCTTGGAGAGTCTTAATAGAAAACGAGGTTCTTGAAGGGGACCTAAGTCACATTCGTCGG
CTACAGAATCTTACAGTAGACATTTTAGTCTACGATAACCATGTTCAAGTGGCAAAGTCCCTGA
AGGTTGGGAGCTTTCTTAGAATCTACAGCCTCCATACCAAACTGCAGTCAGTGTCTTCTGAAAG
CCAGGCATCATTAAGCCTGGAGTTTCATCTCCATGGAGGCACCAGCTATGGGCGGGGAATCACA
GTCTTACCGGAAAGTAATTCTGATGTGGAGCAGCTGAAGAAAGATTTACAGTCTGCAGATTTGG
CAGCCCCTCAGCATTCAGACGGCATCTGTCAATCAGACCACGAGGACAGCTTTCTCACCCTTTC
AAGCTCTGGATCAGTGTCACTGTGTGAGGTAGAAAGATGTCAACAACTGTCGGCTACAATACTT
ACTGACCATCACTATTTGGAGAAGACACCATTATGTGCTATTCTGAAACAAAAAGCTCCTCAGC
AATACCGAATCCGAGCAAAACTAAGATCATATAAGCCCAAAGGACTTTTTCAATCTGTAAAACT
TTATTGTCCTAAATGTCATTCTCTGCAAGAAGTTCCACATGAGAACGATTTGGATATAATTTTA
AGAGATGGAGCAAGTAAAACTCCAGATACCAAATTACAAAATACGCCCTTATATGATTCAGAAG
TCTGGAGCACGGAGGATCAGGGAGGACGAAAAGTTGTGACTCATTTTGTAAAACGTAACGGTGT
TCTCCCACTTTCAAGTGTGTGTCTCATTTTGATAGAAGGAGGTACACTTGGTGAAATCTGTAAA
CTTTCAAGTGAGTTTCATAGTATTATTCCTGTAAAATCTGGCCCTGAAGACCTGGAGCTCCTAG
ACCTTTCAGTCCCATTCCTTATACAAGGAAGACTGTATCACTATGGGTGTAAGCAATGTTCTAG
TTTGAAACCAATACAAAATTTAAATTCCCTTGTTGGTGAGACATCATGGATTCCTTCTTCTGTG
GCAGAAGCATTGGGTATTGTACCCCTGCAACATGTGTTTGTTATGACATTTACTCTGGATGACG
GAACAGGAGTATTAGAAGCTTATCTCATGGATTCTATTCTTCCAGATTCCAGCATCAGAAGTCC
TACTTGATGATAACCTTCAGAGAAGTATGGATTTGATCATGGATATGTTTTGTCCTCCAGGAAC
AAAAATTGATGTGTATCCATGGATGGAGTGTGTTATCAGGTCATATAATGTCACAAATGGAGCA
GAGCAGCAAATTTGCTATCAGATTTTCGACACC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005402401	(Get FASTA)	NCBI Sequence Viewer
	XP_005402402	(Get FASTA)	NCBI Sequence Viewer
	XP_005402403	(Get FASTA)	NCBI Sequence Viewer
	XP_013358747	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000006290
	ENSCLAP00000006290.1

RefSeq Acc Id:

XP_005402403 ⟸ XM_005402346

- UniProtKB:

A0A8C2UW33 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSVSVANYTYTPLNQLKGGTVVNVYGVVKFFKPPYLSKGTDYCSVVTIADQTNVKLTCLLFSG
NYEALPQIYKVGDIVRFHRLKIQVYKNEPQGITSSGFASLTFEGTLGAPVLPRTSSKYFHFTDA
DHKMVEALRIWASTHIPPSSTLVQLYDVQPMQYFDLTCQLLGKAQVDGASFLLKVWDGTRTPFP
SWRVLIENEVLEGDLSHIRRLQNLTVDILVYDNHVQVAKSLKVGSFLRIYSLHTKLQSVSSESQ
ASLSLEFHLHGGTSYGRGITVLPESNSDVEQLKKDLQSADLAAPQHSDGICQSDHEDSFLTLSS
SGSVSLCEVERCQQLSATILTDHHYLEKTPLCAILKQKAPQQYRIRAKLRSYKPKGLFQSVKLY
CPKCHSLQEVPHENDLDIILRDGASKTPDTKLQNTPLYDSEVWSTEDQGGRKVVTHFVKRNGVL
PLSSVCLILIEGGTLGEICKLSSEFHSIIPVKSGPEDLELLDLSVPFLIQGRLYHYGCKQCSSL
KPIQNLNSLVGETSWIPSSVAEALGIVPLQHVFVMTFTLDDGTGVLEAYLMDSDRFFQIPASEV
LLDDNLQRSMDLIMDMFCPPGTKIDVYPWMECVIRSYNVTNGAEQQICYQIFDTTVAEDVT

hide sequence

RefSeq Acc Id:

XP_005402401 ⟸ XM_005402344

- UniProtKB:

A0A8C2UW33 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSVSVANYTYTPLNQLKGGTVVNVYGVVKFFKPPYLSKGTDYCSVVTIADQTNVKLTCLLFSG
NYEALPQIYKVGDIVRFHRLKIQVYKNEPQGITSSGFASLTFEGTLGAPVLPRTSSKYFHFTDA
DHKMVEALRIWASTHIPPSSTLVQLYDVQPMQYFDLTCQLLGKAQVDGASFLLKVWDGTRTPFP
SWRVLIENEVLEGDLSHIRRLQNLTVDILVYDNHVQVAKSLKVGSFLRIYSLHTKLQSVSSESQ
ASLSLEFHLHGGTSYGRGITVLPESNSDVEQLKKDLQSADLAAPQHSDGICQSDHEDSFLTLSS
SGSVSLCEVERCQQLSATILTDHHYLEKTPLCAILKQKAPQQYRIRAKLRSYKPKGLFQSVKLY
CPKCHSLQEVPHENDLDIILRDGASKTPDTKLQNTPLYDSEVWSTEDQGGRKVVTHFVKRNGVL
PLSSVCLILIEGGTLGEICKLSSEFHSIIPVKSGPEDLELLDLSVPFLIQGRLYHYGCKQCSSL
KPIQNLNSLVGETSWIPSSVAEALGIVPLQHVFVMTFTLDDGTGVLEAYLMDSDRFFQIPASEV
LLDDNLQRSMDLIMDMFCPPGTKIDVYPWMECVIRSYNVTNGAEQQICYQIFDTTVAEDVT

hide sequence

RefSeq Acc Id:

XP_005402402 ⟸ XM_005402345

- UniProtKB:

A0A8C2UW33 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSVSVANYTYTPLNQLKGGTVVNVYGVVKFFKPPYLSKGTDYCSVVTIADQTNVKLTCLLFSG
NYEALPQIYKVGDIVRFHRLKIQVYKNEPQGITSSGFASLTFEGTLGAPVLPRTSSKYFHFTDA
DHKMVEALRIWASTHIPPSSTLVQLYDVQPMQYFDLTCQLLGKAQVDGASFLLKVWDGTRTPFP
SWRVLIENEVLEGDLSHIRRLQNLTVDILVYDNHVQVAKSLKVGSFLRIYSLHTKLQSVSSESQ
ASLSLEFHLHGGTSYGRGITVLPESNSDVEQLKKDLQSADLAAPQHSDGICQSDHEDSFLTLSS
SGSVSLCEVERCQQLSATILTDHHYLEKTPLCAILKQKAPQQYRIRAKLRSYKPKGLFQSVKLY
CPKCHSLQEVPHENDLDIILRDGASKTPDTKLQNTPLYDSEVWSTEDQGGRKVVTHFVKRNGVL
PLSSVCLILIEGGTLGEICKLSSEFHSIIPVKSGPEDLELLDLSVPFLIQGRLYHYGCKQCSSL
KPIQNLNSLVGETSWIPSSVAEALGIVPLQHVFVMTFTLDDGTGVLEAYLMDSDRFFQIPASEV
LLDDNLQRSMDLIMDMFCPPGTKIDVYPWMECVIRSYNVTNGAEQQICYQIFDTTVAEDVT

hide sequence

RefSeq Acc Id:

XP_013358747 ⟸ XM_013503293

- UniProtKB:

A0A8C2UW33 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSVSVANYTYTPLNQLKGGTVVNVYGVVKFFKPPYLSKGTDYCSVVTIADQTNVKLTCLLFSG
NYEALPQIYKVGDIVRFHRLKIQVYKNEPQGITSSGFASLTFEGTLGAPVLPRTSSKYFHFTDA
DHKMVEALRIWASTHIPPSSTLVQLYDVQPMQYFDLTCQLLGKAQVDGASFLLKVWDGTRTPFP
SWRVLIENEVLEGDLSHIRRLQNLTVDILVYDNHVQVAKSLKVGSFLRIYSLHTKLQSVSSESQ
ASLSLEFHLHGGTSYGRGITVLPESNSDVEQLKKDLQSADLAAPQHSDGICQSDHEDSFLTLSS
SGSVSLCEVERCQQLSATILTDHHYLEKTPLCAILKQKAPQQYRIRAKLRSYKPKGLFQSVKLY
CPKCHSLQEVPHENDLDIILRDGASKTPDTKLQNTPLYDSEVWSTEDQGGRKVVTHFVKRNGVL
PLSSVCLILIEGGTLGEICKLSSEFHSIIPVKSGPEDLELLDLSVPFLIQGRLYHYGCKQCSSL
KPIQNLNSLVGETSWIPSSVAEALGIVPLQHVFVMTFTLDDGTGVLEAYLMDSDRFFQIPASEV
LLDDNLQRSMDLIMDMFCPPGTKIDVYPWMECVIRSYNVTNGAEQQICYQIFDTTVAEDVT

hide sequence

Ensembl Acc Id:

ENSCLAP00000006290 ⟸ ENSCLAT00000006394

Protein Domains

Telomeric single stranded DNA binding POT1/Cdc13

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004448	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000006394	ENTREZGENE
	ENSCLAT00000006394.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.50.140	UniProtKB/TrEMBL
InterPro	NA-bd_OB-fold	UniProtKB/TrEMBL
	POT1	UniProtKB/TrEMBL
	POT1_C_insert	UniProtKB/TrEMBL
	POT1PC	UniProtKB/TrEMBL
	Telomer_end-bd_POT1/Cdc13	UniProtKB/TrEMBL
NCBI Gene	Pot1	ENTREZGENE
PANTHER	PROTECTION OF TELOMERES PROTEIN 1	UniProtKB/TrEMBL
	PTHR14513	UniProtKB/TrEMBL
Pfam	POT1	UniProtKB/TrEMBL
	POT1_C_insert	UniProtKB/TrEMBL
	POT1PC	UniProtKB/TrEMBL
SMART	Telo_bind	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50249	UniProtKB/TrEMBL
UniProt	A0A8C2UW33	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM