Kif18a (kinesin family member 18A) - Rat Genome Database

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Gene: Kif18a (kinesin family member 18A) Chinchilla lanigera
Analyze
Symbol: Kif18a
Name: kinesin family member 18A
RGD ID: 8947168
Description: ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); male meiotic nuclear division (ortholog); microtubule depolymerization (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); kinetochore (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: kinesin-like protein KIF18A
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554767,058,573 - 7,109,610 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554767,058,682 - 7,117,496 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Kif18a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554767,058,573 - 7,109,610 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554767,058,682 - 7,117,496 (-)NCBIChiLan1.0ChiLan1.0
KIF18A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381128,020,619 - 28,108,156 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1128,020,619 - 28,108,156 (-)EnsemblGRCh38hg38GRCh38
GRCh371128,042,166 - 28,129,703 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361127,998,739 - 28,086,322 (-)NCBINCBI36Build 36hg18NCBI36
Build 341127,998,741 - 28,086,223NCBI
Celera1128,188,055 - 28,275,612 (-)NCBICelera
Cytogenetic Map11p14.1NCBI
HuRef1127,740,692 - 27,828,542 (-)NCBIHuRef
CHM1_11128,041,056 - 28,128,676 (-)NCBICHM1_1
T2T-CHM13v2.01128,161,289 - 28,248,842 (-)NCBIT2T-CHM13v2.0
Kif18a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392109,111,165 - 109,172,094 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2109,111,083 - 109,172,092 (+)EnsemblGRCm39 Ensembl
GRCm382109,280,738 - 109,341,749 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2109,280,738 - 109,341,747 (+)EnsemblGRCm38mm10GRCm38
MGSCv372109,120,895 - 109,181,904 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362109,081,577 - 109,142,586 (+)NCBIMGSCv36mm8
Celera2110,441,710 - 110,502,913 (+)NCBICelera
Cytogenetic Map2E3NCBI
cM Map256.55NCBI
Kif18a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83116,219,007 - 116,279,378 (+)NCBIGRCr8
mRatBN7.2395,764,388 - 95,824,756 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl395,764,388 - 95,824,582 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx399,327,315 - 99,387,814 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03107,926,278 - 107,986,777 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03105,687,071 - 105,747,262 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03100,366,168 - 100,426,867 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3100,366,168 - 100,427,030 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03106,967,785 - 107,028,416 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4394,825,019 - 94,885,158 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera394,796,565 - 94,856,504 (+)NCBICelera
Cytogenetic Map3q34NCBI
KIF18A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2930,234,673 - 30,322,407 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11130,236,640 - 30,323,236 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01127,989,506 - 28,076,078 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11127,890,317 - 27,976,429 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1127,888,435 - 27,976,429 (-)Ensemblpanpan1.1panPan2
KIF18A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12148,497,752 - 48,574,930 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2148,498,087 - 48,565,651 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2147,996,571 - 48,074,757 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02149,642,091 - 49,720,944 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2149,641,761 - 49,720,876 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12148,644,615 - 48,722,982 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02148,795,947 - 48,874,039 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02149,391,450 - 49,469,640 (-)NCBIUU_Cfam_GSD_1.0
Kif18a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494736,048,853 - 36,118,133 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365339,173,715 - 9,239,931 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365339,173,739 - 9,242,928 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF18A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl232,244,137 - 32,335,736 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1232,244,073 - 32,331,392 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2234,827,426 - 34,914,679 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIF18A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1137,003,325 - 37,088,705 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl137,003,357 - 37,088,640 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038134,292,420 - 134,378,450 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kif18a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476617,564,560 - 17,622,932 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476617,565,072 - 17,622,342 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000001473   ⟹   ENSCLAP00000001430
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554767,058,573 - 7,109,610 (-)Ensembl
RefSeq Acc Id: XM_005401755   ⟹   XP_005401812
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554767,058,682 - 7,117,496 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005401812 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000001430
  ENSCLAP00000001430.1
RefSeq Acc Id: XP_005401812   ⟸   XM_005401755
- UniProtKB: A0A8C2UM68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000001430   ⟸   ENSCLAT00000001473
Protein Domains
Kinesin motor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000001083 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000001473 ENTREZGENE
  ENSCLAT00000001473.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/TrEMBL
InterPro Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene Kif18a ENTREZGENE
PANTHER CENTROMERE PROTEIN E UniProtKB/TrEMBL
  KINESIN-LIKE PROTEIN UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/TrEMBL
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_1 UniProtKB/TrEMBL
  KINESIN_MOTOR_2 UniProtKB/TrEMBL
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8C2UM68 ENTREZGENE, UniProtKB/TrEMBL