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Gene: Tnfrsf11a (TNF receptor superfamily member 11a) Chinchilla lanigera

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Symbol:

Tnfrsf11a

Name:

TNF receptor superfamily member 11a

RGD ID:

8887943

Description:

ENCODES a protein that exhibits cytokine binding (ortholog); transmembrane signaling receptor activity (ortholog); tumor necrosis factor receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); cellular response to zinc ion starvation (ortholog); circadian temperature homeostasis (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); autosomal recessive osteopetrosis 7 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); external side of plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tumor necrosis factor receptor superfamily member 11A; tumor necrosis factor receptor superfamily, member 11a, NFKB activator

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	46,264,164 - 46,296,368 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	46,242,329 - 46,298,157 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alveolar Bone Loss (ISO)

autosomal recessive osteopetrosis 7 (ISO)

B-Cell Chronic Lymphocytic Leukemia (ISO)

bone development disease (ISO)

chromosome 18q deletion syndrome (ISO)

familial expansile osteolysis (ISO)

genetic disease (ISO)

Inflammation (ISO)

multiple congenital anomalies-hypotonia-seizures syndrome 1 (ISO)

myocarditis (ISO)

Neoplasm Metastasis (ISO)

osteopetrosis (ISO)

osteoporosis (ISO)

osteosclerosis (ISO)

Paget's disease of bone (ISO)

Paget's disease of bone 2 (ISO)

Prostatic Neoplasms (ISO)

stomach cancer (ISO)

Tibial Fractures (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adaptive immune response (ISO)

cellular response to zinc ion starvation (ISO)

circadian temperature homeostasis (ISO)

lymph node development (ISO)

mammary gland alveolus development (ISO)

multinuclear osteoclast differentiation (ISO)

ossification (ISO)

osteoclast differentiation (ISO)

positive regulation of bone resorption (ISO)

positive regulation of DNA-binding transcription factor activity (ISO)

positive regulation of ERK1 and ERK2 cascade (ISO)

positive regulation of fever generation by positive regulation of prostaglandin secretion (ISO)

positive regulation of JUN kinase activity (ISO)

positive regulation of NF-kappaB transcription factor activity (ISO)

positive regulation of osteoclast differentiation (ISO)

response to ethanol (ISO)

response to insulin (ISO)

response to interleukin-1 (ISO)

response to lipopolysaccharide (ISO)

response to mechanical stimulus (ISO)

response to tumor necrosis factor (ISO)

tumor necrosis factor-mediated signaling pathway (ISO)

Cellular Component

cell surface (ISO)

cytosol (ISO)

external side of plasma membrane (ISO)

membrane raft (ISO)

plasma membrane (ISO)

Molecular Function

cytokine binding (ISO)

protein binding (ISO)

transmembrane signaling receptor activity (ISO)

tumor necrosis factor receptor activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Tnfrsf11a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	46,264,164 - 46,296,368 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	46,242,329 - 46,298,157 (+)	NCBI	ChiLan1.0	ChiLan1.0

TNFRSF11A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	62,325,310 - 62,391,288 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	62,325,287 - 62,391,288 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	59,992,543 - 60,058,521 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	58,143,528 - 58,204,484 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	58,143,527 - 58,204,482	NCBI
Celera	18	56,711,789 - 56,772,745 (+)	NCBI		Celera
Cytogenetic Map	18	q21.33	NCBI
HuRef	18	56,726,294 - 56,766,005 (+)	NCBI		HuRef
CHM1_1	18	59,988,087 - 60,050,490 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	62,528,176 - 62,594,158 (+)	NCBI		T2T-CHM13v2.0

Tnfrsf11a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	105,708,443 - 105,777,172 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	105,708,443 - 105,775,709 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	105,780,673 - 105,849,444 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	105,780,718 - 105,847,981 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	107,677,300 - 107,744,558 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	107,608,270 - 107,672,989 (+)	NCBI		MGSCv36	mm8
Celera	1	108,658,349 - 108,696,865 (+)	NCBI		Celera
Cytogenetic Map	1	E2.1	NCBI
cM Map	1	49.7	NCBI

Tnfrsf11a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	22,442,930 - 22,501,257 (+)	NCBI		GRCr8
mRatBN7.2	13	21,928,370 - 21,986,719 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	21,928,408 - 21,986,695 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	22,247,466 - 22,306,553 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	23,532,261 - 23,591,345 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	22,216,155 - 22,275,239 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	25,778,306 - 25,835,802 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	25,778,317 - 25,835,957 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	30,966,261 - 30,997,692 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	11,958,002 - 12,014,371 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	13	21,798,588 - 21,856,355 (+)	NCBI		Celera
Cytogenetic Map	13	p11	NCBI

TNFRSF11A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	79,846,412 - 79,912,279 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	65,539,023 - 65,604,890 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	55,695,394 - 55,761,307 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	59,032,727 - 59,075,044 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	59,034,770 - 59,075,044 (+)	Ensembl	panpan1.1		panPan2

TNFRSF11A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	14,504,595 - 14,555,956 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	14,503,033 - 14,556,041 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	15,469,086 - 15,523,233 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	14,362,189 - 14,416,396 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	14,362,936 - 14,416,396 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	14,398,162 - 14,452,574 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	14,331,546 - 14,385,610 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	14,578,257 - 14,632,411 (-)	NCBI		UU_Cfam_GSD_1.0

Tnfrsf11a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	27,705,806 - 27,756,172 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936497	2,945,010 - 2,995,207 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936497	2,944,841 - 2,986,113 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TNFRSF11A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	159,128,038 - 159,187,481 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	159,128,039 - 159,187,476 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	176,590,571 - 176,650,002 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TNFRSF11A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	17,385,251 - 17,446,442 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666060	8,239,048 - 8,304,073 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tnfrsf11a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624792	8,029,364 - 8,084,424 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624792	8,029,383 - 8,087,824 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005373177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01001155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01284418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000013906 ⟹ ENSCLAP00000013751

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955402	46,264,164 - 46,296,368 (+)	Ensembl

RefSeq Acc Id:

XM_005373177 ⟹ XP_005373234

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	46,242,329 - 46,298,157 (+)	NCBI

Sequence:

show sequence

GCGCGGCGCCCAGCCCGCCTGCACGCGCCATGGCCCCGCGCGCCCGGCGGCGCGGCCCGCTGCC
CAGGCTGCTGGCGCTGTGCGCGCTGCTCGCCCCGCTGCAGGTGACCTTCCAGGTCACTCCTCCG
TGTGCTAGTGACAGGCATTATGGGCATGCTGGGCGGTGCTGCAGCAAATGCGAACCAGGAAAGT
ACATGTCTTCTAAATGCACTACTACCTCTGACAGCGTGTGTTTGCCCTGTGGCCCGGATGAATA
CTTGGATACCTGGAATGAGGAAGATAAATGCTTGCTGCATAAAGTTTGCGACACAGGCAAGGCC
CTGGTGGCGGTGGATCCCGGGAACCGCACGGCCCCGCGGCGCTGCGCCTGCACGGCTGGGTATC
ACTGGAGCCAGGACTGCGAGTGCTGCCGACGCAACGCGGAGTGTGCGCCCGGCTTCGGCGCCCA
GCACCCTTTGCAGCTCAACATGGACACGGTGTGCAAGCCTTGCCTTGCAGGCTACTTCTCAGAT
TCCTTTTCTTCCACGGACAAATGCAAACCCTGGACCAACTGTACTGTTCTTGGGAAGACAGAAG
AACATCATGGGACAGAGAAATCAGATGTGGTTTGCAGTTCTTCTCTGCCATCTAGAAAACTGCC
GCAGGAGCCCCAGATGTACTTGCCCAGCTTAATCATTCTGCTTCTCTTCGTGTCTGTGGCGTTG
GTGGCTGCCGTCATCTTTGGTGTTTACTACAGAAAAAGGGGGAAAGCAGTAACAGCGAATTTGT
GGCACTGGGTCAATGATGCTTGCAGTCGCCTAAGCGGAAATAAGGAGTCCTCAGGTGACAGTTG
TAACGGTGTTCACTTGGCAGCCTCTCCGCAGCATGAAGTAAGTGAAGGTGTCTTACTGCTGACT
CTGGAGGAGAAGATGATTCCACAAGATATGTGCTGTTCGGATGGTGCTGGTGTCTTCAGGGGTG
CATGCGCAGGAGCTGGGCCCTGTGCTCAGGGCGAAGAAGCCAGGACATTCTCTTTGGTTGAGAT
TGAGGGGGACCCCTTCAGGCAGATTCCCATGGAAGATGAGTACACAGACAGGCCCTCGCAGTCC
CCAGACTGTTCACTGTTCCAGACCCAGCCTGGAAGCAAATCCACACCCGCTTTCTCTGAACCCC
TGGAGGTGGGGGAGAATGACAGTTTAAGCCAGTGCTTCACAGGAACTGAGAGCACTGTGGATTC
AGAAAGCTGCAACGTCACGAAGCCCCCATGTAGGACTGACTGGATTCCCGAGTCCCCTGCAAAA
TATTCACAAAAAGAGGTGGAAGATGGTGGTGGCCCACGCTGGGCAGCCAGTGCCAGCTTGGCAG
ACAGCTGCACAGGCTGTGGGCCTCCTGGGAAGGACCATGAACCCTTCATGAGTTCCCTGAAATG
TGGACACTTGCCCCAGTGTGCCTATGGCATGGGCCTCCCCACTGAGGAAGTAGCCGGCAGGGCA
GAGGGGGGCGACACACCCCAGGAGGGGGATGATGTGAGGCTTCCAGGCTCCGCGAGGGCAGGCA
CTGGATCTGGGAGCTCCTCCTGTGACCAGCCACCTGTATCTGGAAATGTGACCGGAAACAGTAA
CTCGACGTTCATCTCCAGCGGGCAAGTGATGAACTTCAAGGGCGACATCATCGTGGTCTACGTC
AGCCAGACGTCGCAGGAGGGCGCGGCGGGGCCGGGCGGCGCGGGCGCGGACCCCCTGGGGCGCC
CGGTGCAGGAGGAGACGCAGGGCTGCGACTCCTTCGCGGGCAACGCGCCGCGCTTCCCGGACTC
GAGCGCGGCCGCCCAGGCGCCGCGGGGACCTCTCGGGGCGGCGCGGCCGGTGCAGGAGCAGGGC
GCGGGCTGAGCGCGCCGGCCGATCCGGATCCGGATTCCGATCCCTCCGGACCTCGGCCGAGCCC
GGACGGGTGCGCGAACTTGCCTGGCGTTCTCCGCCCGCTTTCCGAGGACCCGGGCCTTTTGAAA
AGCGAGGGTGCATTGCGACGGCTCACTGTGAGCACAGCCTCCCCTTCGCACCGGCGCACAGCGC
CGCCGGCCGGGGTCCACCCGCTCCCGCCGCGGCTTTGCCAGCCCGCACCCGTCCCTCCTCGGTG
ACGGCCCCTTTGACATCTTCGGTTTATGACGGTCTTGGTCCGTGTAGATCCGTTTTCCTCCCTA
TGTTTCACTTTCTTTCTTAACATCTTGATTGTTTCTTGCACCTTCTTTTCCTATTTAAGGATAT
ATATATATATTTCCACTCCTCACAGTGTTCTGCTGATGGCTTTCCAAGTGTGTGTCTGAGGACT
TTCAGGGAAAGGCTAGACCTGTAAAGCCTGGAATGAGCTGCAGGGTACATGTAGAGGGACTTTT
ATTTCCTGGCAAATGTTCTGTGTCCCCATTTTTCTAAAAGGAAGAAAATGGGAGCTCTTGTTTT
GCCCCCATGCATGTTTTTAAGTTTGTATAGTTCCTGGAGCAGAACTAAGTTCAGTGCATGGCCT
TGCCCCCTACCTAGTTTATTTATCCACACCATCAGAGGCAACAGGTATTTGGCAGCTGTCTAAA
AAAAAACTGGCAACTAGACCTCTAAAAATTGCTGCACATAGCATTCTGAATCTTGATGTCTCTG
AAGATGACCAAAAATAAATAAATAAATAATAGGACACTGAGTGTGCCCGCCCACAAAGTGAAAA
GAAGGTGCCAGGGAAGTTCAAGAAAGAATAAAGTTGACATTATTTGCATTTTCTCTTTCTAGAG
ATGAATGCCATAATTATGCTTAAGCAGTAGGTCCTCCTTTCTTCCTAAATAATTGTGCATCTGT
CACTTGGCCTTGATGAAATATCCCTACTTTTCCCAGTGCATTTAATTTACAAAGGAAATCCTCA
TGTTGTGAGCATAAGAGAGCGTCTTATCCTACCTTATTCTCTTGGCACTGGTCCTCCTGCAAAG
AAACAGAATGTAAGTCAGCCTGGGAAGAAGTCACGTGGGTGGATCTATCTGTTGTGGCCAGTGA
GCCACGATGGTTTTCCTTAATACTGGAGAAACGTTAAATCACCGAAGCAAATTAAAAGTAATGT
GGCACATCTGGCAGGTGCAAGGGTGGTAATGGTGGTCACCGTGAAGACTGTAATGGCCATAGAT
GTCCACCTGGAGAGAATGGCTGTGCATCATCTCTCTCCTCGTTTCAGTTCTCCTGGAAGTGCTG
GTTGGTAGCAGCTGATTGTGACTTTCAATGCAGAGGCAGAGAACAGCTCTGTAATTTATGGGAT
CTTCACTCTGCAGGTACAAAGAACTTCAGGAATAACTGCAGTGCGAGAATGATCTGTTGGTGGG
AATTTACTGTCTTTTCTGCCCTTTTAGTTAACATTCACCCAGAATGAGATATAACAAAAATAGC
GGAAAAAACATTACACCTTTTGATTCAGAATATATTAAACAGACAGAATAATAGTTCACAAAGT
AGGATGCTGAGCTAAAAACCCACGTTTCTACTGTGACTGTCATTATCTTACTTCACCTCTCTGC
TTTCATTTTACTTTCTATAAAATGACAATAATAATTTATCATAGTTTTTCTACCCAGAAGTATC
AAATGGATGCTACAGTGAATGTTAAAGTATCTTGAGCTCCTTAAATAAAAGGTGCCATATTAAT
ACATGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005373234	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000013751
	ENSCLAP00000013751.1

RefSeq Acc Id:

XP_005373234 ⟸ XM_005373177

- UniProtKB:

A0A8C2VD00 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAPRARRRGPLPRLLALCALLAPLQVTFQVTPPCASDRHYGHAGRCCSKCEPGKYMSSKCTTTS
DSVCLPCGPDEYLDTWNEEDKCLLHKVCDTGKALVAVDPGNRTAPRRCACTAGYHWSQDCECCR
RNAECAPGFGAQHPLQLNMDTVCKPCLAGYFSDSFSSTDKCKPWTNCTVLGKTEEHHGTEKSDV
VCSSSLPSRKLPQEPQMYLPSLIILLLFVSVALVAAVIFGVYYRKRGKAVTANLWHWVNDACSR
LSGNKESSGDSCNGVHLAASPQHEVSEGVLLLTLEEKMIPQDMCCSDGAGVFRGACAGAGPCAQ
GEEARTFSLVEIEGDPFRQIPMEDEYTDRPSQSPDCSLFQTQPGSKSTPAFSEPLEVGENDSLS
QCFTGTESTVDSESCNVTKPPCRTDWIPESPAKYSQKEVEDGGGPRWAASASLADSCTGCGPPG
KDHEPFMSSLKCGHLPQCAYGMGLPTEEVAGRAEGGDTPQEGDDVRLPGSARAGTGSGSSSCDQ
PPVSGNVTGNSNSTFISSGQVMNFKGDIIVVYVSQTSQEGAAGPGGAGADPLGRPVQEETQGCD
SFAGNAPRFPDSSAAAQAPRGPLGAARPVQEQGAG

hide sequence

Ensembl Acc Id:

ENSCLAP00000013751 ⟸ ENSCLAT00000013906

Protein Domains

TNFR-Cys

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000009504	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000013906	ENTREZGENE
	ENSCLAT00000013906.1	UniProtKB/TrEMBL
Gene3D-CATH	Tumor Necrosis Factor Receptor, subunit A, domain 2	UniProtKB/TrEMBL
InterPro	RANK_CRD_2	UniProtKB/TrEMBL
	TNFR/NGFR_Cys_rich_reg	UniProtKB/TrEMBL
	TNFR_11A	UniProtKB/TrEMBL
	TNFRSF11A	UniProtKB/TrEMBL
	TNFRSF11A_N	UniProtKB/TrEMBL
NCBI Gene	Tnfrsf11a	ENTREZGENE
PANTHER	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 11A	UniProtKB/TrEMBL
	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 11A	UniProtKB/TrEMBL
Pfam	RANK_CRD_2	UniProtKB/TrEMBL
	TNFR_c6	UniProtKB/TrEMBL
PRINTS	TNFACTORR11A	UniProtKB/TrEMBL
PROSITE	TNFR_NGFR_1	UniProtKB/TrEMBL
	TNFR_NGFR_2	UniProtKB/TrEMBL
SMART	TNFR	UniProtKB/TrEMBL
Superfamily-SCOP	TNF receptor-like	UniProtKB/TrEMBL
UniProt	A0A8C2VD00	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Tnfrsf11a	TNF receptor superfamily member 11a		tumor necrosis factor receptor superfamily, member 11a, NFKB activator	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM