Symbol:
TNFRSF11A
Name:
TNF receptor superfamily member 11a
RGD ID:
11700485
Description:
ENCODES a protein that exhibits cytokine binding (inferred); transmembrane signaling receptor activity (inferred); tumor necrosis factor receptor activity (inferred); INVOLVED IN cellular response to zinc ion starvation (ortholog); osteoclast differentiation (ortholog); positive regulation of DNA-binding transcription factor activity (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); autosomal recessive osteopetrosis 7 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cell surface (inferred); cytosol (inferred); external side of plasma membrane (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
tumor necrosis factor receptor superfamily member 11A
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 17 79,846,412 - 79,912,279 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 18 65,539,023 - 65,604,890 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 18 55,695,394 - 55,761,307 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 18 59,032,727 - 59,075,044 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 18 59,034,770 - 59,075,044 (+) Ensembl panpan1.1 panPan2
JBrowse:
View Region in Genome Browser (JBrowse)
Model
TNFRSF11A Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 17 79,846,412 - 79,912,279 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 18 65,539,023 - 65,604,890 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 18 55,695,394 - 55,761,307 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 18 59,032,727 - 59,075,044 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 18 59,034,770 - 59,075,044 (+) Ensembl panpan1.1 panPan2
TNFRSF11A Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 18 62,325,310 - 62,391,288 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 18 62,325,287 - 62,391,288 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 18 59,992,543 - 60,058,521 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 18 58,143,528 - 58,204,484 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 18 58,143,527 - 58,204,482 NCBI Celera 18 56,711,789 - 56,772,745 (+) NCBI Celera Cytogenetic Map 18 q21.33 NCBI HuRef 18 56,726,294 - 56,766,005 (+) NCBI HuRef CHM1_1 18 59,988,087 - 60,050,490 (+) NCBI CHM1_1 T2T-CHM13v2.0 18 62,528,176 - 62,594,158 (+) NCBI T2T-CHM13v2.0
Tnfrsf11a Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 105,708,443 - 105,777,172 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 105,708,443 - 105,775,709 (+) Ensembl GRCm39 Ensembl GRCm38 1 105,780,673 - 105,849,444 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 105,780,718 - 105,847,981 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 1 107,677,300 - 107,744,558 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 1 107,608,270 - 107,672,989 (+) NCBI MGSCv36 mm8 Celera 1 108,658,349 - 108,696,865 (+) NCBI Celera Cytogenetic Map 1 E2.1 NCBI cM Map 1 49.7 NCBI
Tnfrsf11a Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 13 22,442,930 - 22,501,257 (+) NCBI GRCr8 mRatBN7.2 13 21,928,370 - 21,986,719 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 13 21,928,408 - 21,986,695 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 13 22,247,466 - 22,306,553 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 13 23,532,261 - 23,591,345 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 13 22,216,155 - 22,275,239 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 13 25,778,306 - 25,835,802 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 13 25,778,317 - 25,835,957 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 13 30,966,261 - 30,997,692 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 13 11,958,002 - 12,014,371 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 13 21,798,588 - 21,856,355 (+) NCBI Celera Cytogenetic Map 13 p11 NCBI
Tnfrsf11a Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955402 46,264,164 - 46,296,368 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955402 46,242,329 - 46,298,157 (+) NCBI ChiLan1.0 ChiLan1.0
TNFRSF11A Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 1 14,504,595 - 14,555,956 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 1 14,503,033 - 14,556,041 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 1 15,469,086 - 15,523,233 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 1 14,362,189 - 14,416,396 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 1 14,362,936 - 14,416,396 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 1 14,398,162 - 14,452,574 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 1 14,331,546 - 14,385,610 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 1 14,578,257 - 14,632,411 (-) NCBI UU_Cfam_GSD_1.0
Tnfrsf11a Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404944 27,705,806 - 27,756,172 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936497 2,945,010 - 2,995,207 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936497 2,944,841 - 2,986,113 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
TNFRSF11A Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 1 159,128,038 - 159,187,481 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 1 159,128,039 - 159,187,476 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 1 176,590,571 - 176,650,002 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
TNFRSF11A
Tnfrsf11a
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSPPAT00000024826 ⟹ ENSPPAP00000005462
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 18 59,034,770 - 59,072,418 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000024829 ⟹ ENSPPAP00000005465
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 18 59,036,021 - 59,075,044 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000024830 ⟹ ENSPPAP00000005466
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 18 59,036,021 - 59,072,418 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000024840 ⟹ ENSPPAP00000005467
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 18 59,036,021 - 59,072,418 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000024843 ⟹ ENSPPAP00000005468
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 18 59,036,021 - 59,072,140 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000024847 ⟹ ENSPPAP00000005469
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 18 59,036,021 - 59,055,224 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000024848 ⟹ ENSPPAP00000005470
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 18 59,036,559 - 59,072,418 (+) Ensembl
RefSeq Acc Id:
XM_034943906 ⟹ XP_034799797
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 17 79,846,412 - 79,912,279 (+) NCBI NHGRI_mPanPan1 18 65,539,023 - 65,604,890 (+) NCBI Mhudiblu_PPA_v0 18 55,695,394 - 55,761,307 (+) NCBI
RefSeq Acc Id:
XM_034943907 ⟹ XP_034799798
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 17 79,868,490 - 79,912,279 (+) NCBI NHGRI_mPanPan1 18 65,561,101 - 65,604,890 (+) NCBI Mhudiblu_PPA_v0 18 55,718,060 - 55,761,307 (+) NCBI
RefSeq Acc Id:
XM_034943909 ⟹ XP_034799800
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 17 79,846,412 - 79,912,279 (+) NCBI NHGRI_mPanPan1 18 65,539,023 - 65,604,890 (+) NCBI Mhudiblu_PPA_v0 18 55,695,394 - 55,761,307 (+) NCBI
RefSeq Acc Id:
XP_034799797 ⟸ XM_034943906
- Peptide Label:
isoform X1
- UniProtKB:
A0A2R8ZNB3 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034799800 ⟸ XM_034943909
- Peptide Label:
isoform X3
- UniProtKB:
A0A2R8ZKH9 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034799798 ⟸ XM_034943907
- Peptide Label:
isoform X2
- UniProtKB:
A0A2R8ZNB7 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSPPAP00000005465 ⟸ ENSPPAT00000024829
Ensembl Acc Id:
ENSPPAP00000005466 ⟸ ENSPPAT00000024830
Ensembl Acc Id:
ENSPPAP00000005462 ⟸ ENSPPAT00000024826
Ensembl Acc Id:
ENSPPAP00000005469 ⟸ ENSPPAT00000024847
Ensembl Acc Id:
ENSPPAP00000005470 ⟸ ENSPPAT00000024848
Ensembl Acc Id:
ENSPPAP00000005468 ⟸ ENSPPAT00000024843
Ensembl Acc Id:
ENSPPAP00000005467 ⟸ ENSPPAT00000024840
