Spint1 (serine peptidase inhibitor, Kunitz type 1)

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Gene: Spint1 (serine peptidase inhibitor, Kunitz type 1) Chinchilla lanigera

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Symbol:

Spint1

Name:

serine peptidase inhibitor, Kunitz type 1

RGD ID:

8754620

Description:

ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to BMP stimulus (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); biliary atresia (ortholog); Bloom syndrome (ortholog); FOUND IN plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

kunitz-type protease inhibitor 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	7,715,536 - 7,729,158 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	7,715,536 - 7,728,759 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

biliary atresia (ISO)

Bloom syndrome (ISO)

breast cancer (ISO)

cholestasis (ISO)

colorectal cancer (ISO)

Colorectal Neoplasms (ISO)

ichthyosis (ISO)

liver cirrhosis (ISO)

mosaic variegated aneuploidy syndrome 1 (ISO)

ovarian cancer (ISO)

primary biliary cholangitis (ISO)

prostate carcinoma (ISO)

stomach carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

branching involved in labyrinthine layer morphogenesis (ISO)

cellular response to BMP stimulus (ISO)

embryonic placenta development (ISO)

extracellular matrix organization (ISO)

negative regulation of neural precursor cell proliferation (ISO)

neural tube closure (ISO)

placenta blood vessel development (ISO)

positive regulation of glial cell differentiation (ISO)

Cellular Component

plasma membrane (ISO)

Molecular Function

protein binding (ISO)

serine-type endopeptidase inhibitor activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Spint1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	7,715,536 - 7,729,158 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	7,715,536 - 7,728,759 (+)	NCBI	ChiLan1.0	ChiLan1.0

SPINT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	40,844,048 - 40,858,207 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	40,844,018 - 40,858,207 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	41,136,246 - 41,150,405 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	38,923,538 - 38,937,145 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	17,904,155 - 17,917,761 (+)	NCBI		Celera
Cytogenetic Map	15	q15.1	NCBI
HuRef	15	17,956,043 - 17,998,087 (+)	NCBI		HuRef
CHM1_1	15	41,254,190 - 41,267,796 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	38,650,076 - 38,664,232 (+)	NCBI		T2T-CHM13v2.0

Spint1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	119,067,841 - 119,079,995 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	119,067,843 - 119,080,008 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	119,237,360 - 119,249,535 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	119,237,362 - 119,249,527 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	119,063,096 - 119,075,250 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	118,928,918 - 118,940,633 (+)	NCBI		MGSCv36	mm8
Celera	2	120,387,921 - 120,400,196 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	59.97	NCBI

Spint1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	126,685,017 - 126,697,957 (+)	NCBI		GRCr8
mRatBN7.2	3	106,231,082 - 106,244,121 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	106,231,444 - 106,244,119 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	109,904,232 - 109,916,890 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	118,499,779 - 118,512,434 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	116,160,160 - 116,172,815 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	111,049,132 - 111,061,991 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	111,049,118 - 111,062,011 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	117,599,717 - 117,612,635 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	105,757,666 - 105,770,345 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	105,654,093 - 105,666,772 (+)	NCBI
Celera	3	105,144,668 - 105,157,338 (+)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

SPINT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	30,086,766 - 30,100,403 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	34,238,095 - 34,251,732 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	19,786,621 - 19,800,297 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	38,036,638 - 38,050,303 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	38,036,638 - 38,050,303 (+)	Ensembl	panpan1.1		panPan2

SPINT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	7,976,094 - 7,989,019 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	7,975,235 - 7,988,339 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	8,030,789 - 8,043,874 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	8,104,320 - 8,117,280 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	8,104,237 - 8,117,684 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	8,026,984 - 8,039,921 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	8,134,558 - 8,147,504 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	8,264,088 - 8,277,146 (+)	NCBI		UU_Cfam_GSD_1.0

Spint1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	86,390,799 - 86,403,274 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	4,238,845 - 4,251,350 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	4,238,883 - 4,251,291 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPINT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	130,458,909 - 130,473,783 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	130,458,909 - 130,473,791 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	145,616,937 - 145,631,763 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPINT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	42,136,749 - 42,150,125 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	42,134,536 - 42,150,118 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	98,833,369 - 98,846,726 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spint1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	8,093,346 - 8,106,193 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624804	8,092,700 - 8,105,478 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005381266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013512623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013512624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013512625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01017005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01017006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01017007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01070594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000017245 ⟹ ENSCLAP00000017077

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955416	7,715,536 - 7,729,158 (+)	Ensembl

RefSeq Acc Id:

XM_005381266 ⟹ XP_005381323

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	7,716,222 - 7,728,759 (+)	NCBI

Sequence:

show sequence

CCCGGTCGCGGGCCCCCTCGGAACCCCGAGGCCTGCGCTGTGCGGGTGACTGCCCTGCGGAGAA
GGACGACGGCAGCCGGGAGGACGATGGCCGGCGCCATCGCCGCCGCCGTGTGGCTCCTTTGCGC
CCTCGGCCGCAGGGCCGCCGACGCCGGGTTGCCGCCCGCGCCCGCTGAACTGCCCACCGGAGCC
TCCTGCCTGGCCCGCTTCACCAGCGGGGTCCCTGCCTTCGTGCTGGACACCGAGGCCTCGGTCA
GCAACGGGGCCACCTTCCTGGGGTCCCCCGCGGCGCGGCGGGGCTGGGACTGCGTGCGCGCCTG
CTGCGCCACCCAGAGCTGCAACCTGGCGCTGGTGGAGCTGCAGCCCGACGGCGGGGAGGACGCC
ATCTCTGCCTGCTTCCTCATGAATTGCGTCTATGAGCAGAACTTTGTGTGCAAGTTCGCGCGCA
GGGACGGCTTCATCAACTACCTCACGCAGGAGGTTTACCGCTCCTACCGCGAGCTGCAGAGGCA
GGGCTTCGGAGGGTCCCGGATCCCCAGGGCCTGGGTGGGCATAGACTTGAAGGTACAACCCCAG
GAACCCCTGGTGCTGAAGGATGTGGGCAGCACAGATTGGCAGCTCCTTCAGGGTGACGCCAGCG
TCAGCATAGAGAGGAAAGAGCTGGACCAGTTGGAGCTATGGGGACTCAAGGAAGGCACCTACGT
GTTCCAGCTGAAAGCCGCCGGCTCGGACGAGCCAGAGGGCACAGCAAACGTCACAGTCACGGTG
TTGTCCGCCAAGCAGACAGAAGATTACTGCCTCGCCTCCAGCAAAGTGGGCCGCTGCCGGGGCG
CCTTCCCCCGCTGGTACTACAGCCCCAAAGAGCAGATCTGCAAGAGGTTCATTTATGGGGGTTG
CTTGGGTAACAAGAACAACTACCTTCGGGAGGAGGAGTGCATGCTGGCCTGTCGGGATGTGCAA
GGGCCCTCGATGGAAAGGCAGCATCCAGTGTGTTCGGGCAGCTGCCAGCCCACCCAGTTCCGCT
GCAGTGATGGCTGCTGCATTGACAGCTTCCTGGAGTGTGACGACACCCCAGACTGCCCTGATGG
CTCCGACGAGGCCACCTGTGAAAAATATATCACTGGCTTTGACGAGCTCCAGAACATCCATTTG
CCCAGTGACAAAGGGCACTGCGTGGACCTGCCAGACACAGGTCTCTGCCAGGACAGCATCCCGC
GCTGGTACTACAACCCGTTCAGTGAGCGCTGCAGTCGGTTTACCTACGGTGGTTGTGACGGCAA
CAAGAACAACTTTGAGGAAGAGCAGCAGTGTCTGGAGTCCTGTCGTGGCATCTCCAAGAAGGAT
GTGTTTGGGCTGCGGCGGGAGAGCTCCATTCCCAACGTAGGCTCAGTGGAAGTGGCGATTGCTG
TACTCCTGGTCACCTGCATTGTAGTGGTGCTGACCGTCCTGGGTTACTGCTGCTTCAAGAACCA
GAGGAAGGGCTTCCGCAGGCACCGCCACCCCCCGCCCACGCCCGCCAGCTCCACCGTCTCCACC
GCCGAGGACACAGAGCACCTGGTCTATAATCACACGACCCGGCCCCTCTGAGCCAAGGCACTTC
CTGCTCATGAAGCCTCGGGACGCTTCGGGACCAGACTCCTCCTGCCTGTTGCCCAGGCTTCTGT
GCCTCTGAAGAGGGGCTTTGCCCTCTTGGAGAAGTCTCCGAGAGCTTGGGCCAGTTGTTCCTGA
GAAAGCTCAAGGGTGTGGGAGCAGCAGGAAGCCCTTGAGCCAGTACTGTATAGATGGACCCGCG
CGAAGCGGGGTTTCTGTTGTGTTCAGAGCTACCTACGCACCCCCTGGCTCTGGGAAGGAAGCTG
GGGTGGTGTTGGAAACTGACCCTGTCCTCCATCGCTGCCCTTCAGCTCTGCACAGTCCAGAGGA
GGACTTCCCTGTGTAGTTTGTGCTGTAAAGAACTGCCGTTGGAGTGCTGGGGACAGAGCTCAGT
GGTAGAGTGTGTGTGCTGAGCATGCCTGAGGCCCTCGGTTCCATCCCCAGCACTGGAGAGCGGG
TGCTCTGTCTGTGTTTAGTGTTGTGGGGCTGAGAGGAGTGGAAGACGGCTGCCTTCCTCTTCCC
TCAAGATTGAGCTATCTGCCTGTACCCAGCCAGAGCCTACTCTAGACGAGCAGTCAGAGCTAGA
AGAGGCTCCCCGCATCCTCCACCCGCGGGCCCCAGGGCTCCCCAGCGTCTCACCCAGCCCTTTC
TCCGCTTCCCACAGGTCCAGTGCACTCTGTGGAAAAGGAGGTGTACGAGGCAGGGGGTACAACT
TGGCAGCAAAGTGCTTACCTAGCACACACGGGGCCCTGGGCGTTCAGTCCCCAGCTCTGCAAAA
ATAAATGAGATGAGATGGTTT

hide sequence

RefSeq Acc Id:

XM_013512623 ⟹ XP_013368077

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	7,715,536 - 7,728,759 (+)	NCBI

Sequence:

show sequence

CCTCAGCCTCCCAAGTGTTGGGATTACAGGCGTGCGCCACCACGCCAGGCTTCTGGGTTGTCTT
GACCCCAAGAAATGGGAAGGATGTCCGCAGGGTTGGCTAGCGACGGCAAGGTCACTTGCATCCC
CTCCACCCCCTTCCCAAGCGCCCAAGGCCTGGGGCGGGCATCCTGGCTCCGACCAGAAAGGGGA
GCCGGAGGCTGCCGTCCTAGAGCGCCCTACCTGCGCGACTTTGCTGCAGCCCCGTCCCTGTCCC
CGCCTTCGGGGTTCAGGATGCTCTTCTGGGACGCAGGGGGCCCGGCGTGGTCGCGGGCCCCCTC
GGAACCCCGAGGCCTGCGCTGTGCGGGTGACTGCCCTGCGGAGAAGGACGACGGCAGCCGGGAG
GACGATGGCCGGCGCCATCGCCGCCGCCGTGTGGCTCCTTTGCGCCCTCGGCCGCAGGGCCGCC
GACGCCGGGTTGCCGCCCGCGCCCGCTGAACTGCCCACCGGAGCCTCCTGCCTGGCCCGCTTCA
CCAGCGGGGTCCCTGCCTTCGTGCTGGACACCGAGGCCTCGGTCAGCAACGGGGCCACCTTCCT
GGGGTCCCCCGCGGCGCGGCGGGGCTGGGACTGCGTGCGCGCCTGCTGCGCCACCCAGAGCTGC
AACCTGGCGCTGGTGGAGCTGCAGCCCGACGGCGGGGAGGACGCCATCTCTGCCTGCTTCCTCA
TGAATTGCGTCTATGAGCAGAACTTTGTGTGCAAGTTCGCGCGCAGGGACGGCTTCATCAACTA
CCTCACGCAGGAGGTTTACCGCTCCTACCGCGAGCTGCAGAGGCAGGGCTTCGGAGGGTCCCGG
ATCCCCAGGGCCTGGGTGGGCATAGACTTGAAGGTACAACCCCAGGAACCCCTGGTGCTGAAGG
ATGTGGGCAGCACAGATTGGCAGCTCCTTCAGGGTGACGCCAGCGTCAGCATAGAGAGGAAAGA
GCTGGACCAGTTGGAGCTATGGGGACTCAAGGAAGGCACCTACGTGTTCCAGCTGAAAGCCGCC
GGCTCGGACGAGCCAGAGGGCACAGCAAACGTCACAGTCACGGTGTTGTCCGCCAAGCAGACAG
AAGATTACTGCCTCGCCTCCAGCAAAGTGGGCCGCTGCCGGGGCGCCTTCCCCCGCTGGTACTA
CAGCCCCAAAGAGCAGATCTGCAAGAGGTTCATTTATGGGGGTTGCTTGGGTAACAAGAACAAC
TACCTTCGGGAGGAGGAGTGCATGCTGGCCTGTCGGGATGTGCAAGGGCCCTCGATGGAAAGGC
AGCATCCAGTGTGTTCGGGCAGCTGCCAGCCCACCCAGTTCCGCTGCAGTGATGGCTGCTGCAT
TGACAGCTTCCTGGAGTGTGACGACACCCCAGACTGCCCTGATGGCTCCGACGAGGCCACCTGT
GAAAAATATATCACTGGCTTTGACGAGCTCCAGAACATCCATTTGCCCAGTGACAAAGGGCACT
GCGTGGACCTGCCAGACACAGGTCTCTGCCAGGACAGCATCCCGCGCTGGTACTACAACCCGTT
CAGTGAGCGCTGCAGTCGGTTTACCTACGGTGGTTGTGACGGCAACAAGAACAACTTTGAGGAA
GAGCAGCAGTGTCTGGAGTCCTGTCGTGGCATCTCCAAGAAGGATGTGTTTGGGCTGCGGCGGG
AGAGCTCCATTCCCAACGTAGGCTCAGTGGAAGTGGCGATTGCTGTACTCCTGGTCACCTGCAT
TGTAGTGGTGCTGACCGTCCTGGGTTACTGCTGCTTCAAGAACCAGAGGAAGGGCTTCCGCAGG
CACCGCCACCCCCCGCCCACGCCCGCCAGCTCCACCGTCTCCACCGCCGAGGACACAGAGCACC
TGGTCTATAATCACACGACCCGGCCCCTCTGAGCCAAGGCACTTCCTGCTCATGAAGCCTCGGG
ACGCTTCGGGACCAGACTCCTCCTGCCTGTTGCCCAGGCTTCTGTGCCTCTGAAGAGGGGCTTT
GCCCTCTTGGAGAAGTCTCCGAGAGCTTGGGCCAGTTGTTCCTGAGAAAGCTCAAGGGTGTGGG
AGCAGCAGGAAGCCCTTGAGCCAGTACTGTATAGATGGACCCGCGCGAAGCGGGGTTTCTGTTG
TGTTCAGAGCTACCTACGCACCCCCTGGCTCTGGGAAGGAAGCTGGGGTGGTGTTGGAAACTGA
CCCTGTCCTCCATCGCTGCCCTTCAGCTCTGCACAGTCCAGAGGAGGACTTCCCTGTGTAGTTT
GTGCTGTAAAGAACTGCCGTTGGAGTGCTGGGGACAGAGCTCAGTGGTAGAGTGTGTGTGCTGA
GCATGCCTGAGGCCCTCGGTTCCATCCCCAGCACTGGAGAGCGGGTGCTCTGTCTGTGTTTAGT
GTTGTGGGGCTGAGAGGAGTGGAAGACGGCTGCCTTCCTCTTCCCTCAAGATTGAGCTATCTGC
CTGTACCCAGCCAGAGCCTACTCTAGACGAGCAGTCAGAGCTAGAAGAGGCTCCCCGCATCCTC
CACCCGCGGGCCCCAGGGCTCCCCAGCGTCTCACCCAGCCCTTTCTCCGCTTCCCACAGGTCCA
GTGCACTCTGTGGAAAAGGAGGTGTACGAGGCAGGGGGTACAACTTGGCAGCAAAGTGCTTACC
TAGCACACACGGGGCCCTGGGCGTTCAGTCCCCAGCTCTGCAAAAATAAATGAGATGAGATGGT
TT

hide sequence

RefSeq Acc Id:

XM_013512624 ⟹ XP_013368078

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	7,716,240 - 7,728,759 (+)	NCBI

Sequence:

show sequence

GCGCCCCGCGAGCTCGTCCGTCGGGGCCCCGGAGCGCGCAGGAGGGCCGGGTCTCCGCCTCCCG
GGCGACGGGCCGTGCCCGAGGTCTCCTGGGCTGATAGGTGTGTTTTCTCCTGGTCCCTCCCCCA
GGTCGCGGGCCCCCTCGGAACCCCGAGGCCTGCGCTGTGCGGGTGACTGCCCTGCGGAGAAGGA
CGACGGCAGCCGGGAGGACGATGGCCGGCGCCATCGCCGCCGCCGTGTGGCTCCTTTGCGCCCT
CGGCCGCAGGGCCGCCGACGCCGGGTTGCCGCCCGCGCCCGCTGAACTGCCCACCGGAGCCTCC
TGCCTGGCCCGCTTCACCAGCGGGGTCCCTGCCTTCGTGCTGGACACCGAGGCCTCGGTCAGCA
ACGGGGCCACCTTCCTGGGGTCCCCCGCGGCGCGGCGGGGCTGGGACTGCGTGCGCGCCTGCTG
CGCCACCCAGAGCTGCAACCTGGCGCTGGTGGAGCTGCAGCCCGACGGCGGGGAGGACGCCATC
TCTGCCTGCTTCCTCATGAATTGCGTCTATGAGCAGAACTTTGTGTGCAAGTTCGCGCGCAGGG
ACGGCTTCATCAACTACCTCACGCAGGAGGTTTACCGCTCCTACCGCGAGCTGCAGAGGCAGGG
CTTCGGAGGGTCCCGGATCCCCAGGGCCTGGGTGGGCATAGACTTGAAGGTACAACCCCAGGAA
CCCCTGGTGCTGAAGGATGTGGGCAGCACAGATTGGCAGCTCCTTCAGGGTGACGCCAGCGTCA
GCATAGAGAGGAAAGAGCTGGACCAGTTGGAGCTATGGGGACTCAAGGAAGGCACCTACGTGTT
CCAGCTGAAAGCCGCCGGCTCGGACGAGCCAGAGGGCACAGCAAACGTCACAGTCACGGTGTTG
TCCGCCAAGCAGACAGAAGATTACTGCCTCGCCTCCAGCAAAGTGGGCCGCTGCCGGGGCGCCT
TCCCCCGCTGGTACTACAGCCCCAAAGAGCAGATCTGCAAGAGGTTCATTTATGGGGGTTGCTT
GGGTAACAAGAACAACTACCTTCGGGAGGAGGAGTGCATGCTGGCCTGTCGGGATGTGCAAGGG
CCCTCGATGGAAAGGCAGCATCCAGTGTGTTCGGGCAGCTGCCAGCCCACCCAGTTCCGCTGCA
GTGATGGCTGCTGCATTGACAGCTTCCTGGAGTGTGACGACACCCCAGACTGCCCTGATGGCTC
CGACGAGGCCACCTGTGAAAAATATATCACTGGCTTTGACGAGCTCCAGAACATCCATTTGCCC
AGTGACAAAGGGCACTGCGTGGACCTGCCAGACACAGGTCTCTGCCAGGACAGCATCCCGCGCT
GGTACTACAACCCGTTCAGTGAGCGCTGCAGTCGGTTTACCTACGGTGGTTGTGACGGCAACAA
GAACAACTTTGAGGAAGAGCAGCAGTGTCTGGAGTCCTGTCGTGGCATCTCCAGTGAGCCTGGT
GGCGGGCTAGGAGAAGGATGTGTTTGGGCTGCGGCGGGAGAGCTCCATTCCCAACGTAGGCTCA
GTGGAAGTGGCGATTGCTGTACTCCTGGTCACCTGCATTGTAGTGGTGCTGACCGTCCTGGGTT
ACTGCTGCTTCAAGAACCAGAGGAAGGGCTTCCGCAGGCACCGCCACCCCCCGCCCACGCCCGC
CAGCTCCACCGTCTCCACCGCCGAGGACACAGAGCACCTGGTCTATAATCACACGACCCGGCCC
CTCTGAGCCAAGGCACTTCCTGCTCATGAAGCCTCGGGACGCTTCGGGACCAGACTCCTCCTGC
CTGTTGCCCAGGCTTCTGTGCCTCTGAAGAGGGGCTTTGCCCTCTTGGAGAAGTCTCCGAGAGC
TTGGGCCAGTTGTTCCTGAGAAAGCTCAAGGGTGTGGGAGCAGCAGGAAGCCCTTGAGCCAGTA
CTGTATAGATGGACCCGCGCGAAGCGGGGTTTCTGTTGTGTTCAGAGCTACCTACGCACCCCCT
GGCTCTGGGAAGGAAGCTGGGGTGGTGTTGGAAACTGACCCTGTCCTCCATCGCTGCCCTTCAG
CTCTGCACAGTCCAGAGGAGGACTTCCCTGTGTAGTTTGTGCTGTAAAGAACTGCCGTTGGAGT
GCTGGGGACAGAGCTCAGTGGTAGAGTGTGTGTGCTGAGCATGCCTGAGGCCCTCGGTTCCATC
CCCAGCACTGGAGAGCGGGTGCTCTGTCTGTGTTTAGTGTTGTGGGGCTGAGAGGAGTGGAAGA
CGGCTGCCTTCCTCTTCCCTCAAGATTGAGCTATCTGCCTGTACCCAGCCAGAGCCTACTCTAG
ACGAGCAGTCAGAGCTAGAAGAGGCTCCCCGCATCCTCCACCCGCGGGCCCCAGGGCTCCCCAG
CGTCTCACCCAGCCCTTTCTCCGCTTCCCACAGGTCCAGTGCACTCTGTGGAAAAGGAGGTGTA
CGAGGCAGGGGGTACAACTTGGCAGCAAAGTGCTTACCTAGCACACACGGGGCCCTGGGCGTTC
AGTCCCCAGCTCTGCAAAAATAAATGAGATGAGATGGTTT

hide sequence

RefSeq Acc Id:

XM_013512625 ⟹ XP_013368079

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	7,715,750 - 7,728,759 (+)	NCBI

Sequence:

show sequence

CGCCCTACCTGCGCGACTTTGCTGCAGCCCCGTCCCTGTCCCCGCCTTCGGGGTTCAGGATGCT
CTTCTGGGACGCAGGGGGCCCGGCGTGGTAGGGACGAGGCGCCCCGGGCGTCGGGGCGCAGGTC
GCGGGCCCCCTCGGAACCCCGAGGCCTGCGCTGTGCGGGTGACTGCCCTGCGGAGAAGGACGAC
GGCAGCCGGGAGGACGATGGCCGGCGCCATCGCCGCCGCCGTGTGGCTCCTTTGCGCCCTCGGC
CGCAGGGCCGCCGACGCCGGGTTGCCGCCCGCGCCCGCTGAACTGCCCACCGGAGCCTCCTGCC
TGGCCCGCTTCACCAGCGGGGTCCCTGCCTTCGTGCTGGACACCGAGGCCTCGGTCAGCAACGG
GGCCACCTTCCTGGGGTCCCCCGCGGCGCGGCGGGGCTGGGACTGCGTGCGCGCCTGCTGCGCC
ACCCAGAGCTGCAACCTGGCGCTGGTGGAGCTGCAGCCCGACGGCGGGGAGGACGCCATCTCTG
CCTGCTTCCTCATGAATTGCGTCTATGAGCAGAACTTTGTGTGCAAGTTCGCGCGCAGGGACGG
CTTCATCAACTACCTCACGCAGGAGGTTTACCGCTCCTACCGCGAGCTGCAGAGGCAGGGCTTC
GGAGGGTCCCGGATCCCCAGGGCCTGGGTGGGCATAGACTTGAAGGTACAACCCCAGGAACCCC
TGGTGCTGAAGGATGTGGGCAGCACAGATTGGCAGCTCCTTCAGGGTGACGCCAGCGTCAGCAT
AGAGAGGAAAGAGCTGGACCAGTTGGAGCTATGGGGACTCAAGGAAGGCACCTACGTGTTCCAG
CTGAAAGCCGCCGGCTCGGACGAGCCAGAGGGCACAGCAAACGTCACAGTCACGGTGTTGTCCG
CCAAGCAGACAGAAGATTACTGCCTCGCCTCCAGCAAAGTGGGCCGCTGCCGGGGCGCCTTCCC
CCGCTGGTACTACAGCCCCAAAGAGCAGATCTGCAAGAGGTTCATTTATGGGGGTTGCTTGGGT
AACAAGAACAACTACCTTCGGGAGGAGGAGTGCATGCTGGCCTGTCGGGATGTGCAAGGGCCCT
CGATGGAAAGGCAGCATCCAGTGTGTTCGGGCAGCTGCCAGCCCACCCAGTTCCGCTGCAGTGA
TGGCTGCTGCATTGACAGCTTCCTGGAGTGTGACGACACCCCAGACTGCCCTGATGGCTCCGAC
GAGGCCACCTGTGAAAAATATATCACTGGCTTTGACGAGCTCCAGAACATCCATTTGCCCAGTG
ACAAAGGGCACTGCGTGGACCTGCCAGACACAGGTCTCTGCCAGGACAGCATCCCGCGCTGGTA
CTACAACCCGTTCAGTGAGCGCTGCAGTCGGTTTACCTACGGTGGTTGTGACGGCAACAAGAAC
AACTTTGAGGAAGAGCAGCAGTGTCTGGAGTCCTGTCGTGGCATCTCCAAGAAGGATGTGTTTG
GGCTGCGGCGGGAGAGCTCCATTCCCAACGTAGGCTCAGTGGAAGTGGCGATTGCTGTACTCCT
GGTCACCTGCATTGTAGTGGTGCTGACCGTCCTGGGTTACTGCTGCTTCAAGAACCAGAGGAAG
GGCTTCCGCAGGCACCGCCACCCCCCGCCCACGCCCGCCAGCTCCACCGTCTCCACCGCCGAGG
ACACAGAGCACCTGGTCTATAATCACACGACCCGGCCCCTCTGAGCCAAGGCACTTCCTGCTCA
TGAAGCCTCGGGACGCTTCGGGACCAGACTCCTCCTGCCTGTTGCCCAGGCTTCTGTGCCTCTG
AAGAGGGGCTTTGCCCTCTTGGAGAAGTCTCCGAGAGCTTGGGCCAGTTGTTCCTGAGAAAGCT
CAAGGGTGTGGGAGCAGCAGGAAGCCCTTGAGCCAGTACTGTATAGATGGACCCGCGCGAAGCG
GGGTTTCTGTTGTGTTCAGAGCTACCTACGCACCCCCTGGCTCTGGGAAGGAAGCTGGGGTGGT
GTTGGAAACTGACCCTGTCCTCCATCGCTGCCCTTCAGCTCTGCACAGTCCAGAGGAGGACTTC
CCTGTGTAGTTTGTGCTGTAAAGAACTGCCGTTGGAGTGCTGGGGACAGAGCTCAGTGGTAGAG
TGTGTGTGCTGAGCATGCCTGAGGCCCTCGGTTCCATCCCCAGCACTGGAGAGCGGGTGCTCTG
TCTGTGTTTAGTGTTGTGGGGCTGAGAGGAGTGGAAGACGGCTGCCTTCCTCTTCCCTCAAGAT
TGAGCTATCTGCCTGTACCCAGCCAGAGCCTACTCTAGACGAGCAGTCAGAGCTAGAAGAGGCT
CCCCGCATCCTCCACCCGCGGGCCCCAGGGCTCCCCAGCGTCTCACCCAGCCCTTTCTCCGCTT
CCCACAGGTCCAGTGCACTCTGTGGAAAAGGAGGTGTACGAGGCAGGGGGTACAACTTGGCAGC
AAAGTGCTTACCTAGCACACACGGGGCCCTGGGCGTTCAGTCCCCAGCTCTGCAAAAATAAATG
AGATGAGATGGTTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005381323	(Get FASTA)	NCBI Sequence Viewer
	XP_013368077	(Get FASTA)	NCBI Sequence Viewer
	XP_013368078	(Get FASTA)	NCBI Sequence Viewer
	XP_013368079	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000017077
	ENSCLAP00000017077.1

RefSeq Acc Id:	XP_005381323 ⟸ XM_005381266
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VKR3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGAIAAAVWLLCALGRRAADAGLPPAPAELPTGASCLARFTSGVPAFVLDTEASVSNGATFLG SPAARRGWDCVRACCATQSCNLALVELQPDGGEDAISACFLMNCVYEQNFVCKFARRDGFINYL TQEVYRSYRELQRQGFGGSRIPRAWVGIDLKVQPQEPLVLKDVGSTDWQLLQGDASVSIERKEL DQLELWGLKEGTYVFQLKAAGSDEPEGTANVTVTVLSAKQTEDYCLASSKVGRCRGAFPRWYYS PKEQICKRFIYGGCLGNKNNYLREEECMLACRDVQGPSMERQHPVCSGSCQPTQFRCSDGCCID SFLECDDTPDCPDGSDEATCEKYITGFDELQNIHLPSDKGHCVDLPDTGLCQDSIPRWYYNPFS ERCSRFTYGGCDGNKNNFEEEQQCLESCRGISKKDVFGLRRESSIPNVGSVEVAIAVLLVTCIV VVLTVLGYCCFKNQRKGFRRHRHPPPTPASSTVSTAEDTEHLVYNHTTRPL hide sequence

RefSeq Acc Id:	XP_013368077 ⟸ XM_013512623
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VKR3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGAIAAAVWLLCALGRRAADAGLPPAPAELPTGASCLARFTSGVPAFVLDTEASVSNGATFLG SPAARRGWDCVRACCATQSCNLALVELQPDGGEDAISACFLMNCVYEQNFVCKFARRDGFINYL TQEVYRSYRELQRQGFGGSRIPRAWVGIDLKVQPQEPLVLKDVGSTDWQLLQGDASVSIERKEL DQLELWGLKEGTYVFQLKAAGSDEPEGTANVTVTVLSAKQTEDYCLASSKVGRCRGAFPRWYYS PKEQICKRFIYGGCLGNKNNYLREEECMLACRDVQGPSMERQHPVCSGSCQPTQFRCSDGCCID SFLECDDTPDCPDGSDEATCEKYITGFDELQNIHLPSDKGHCVDLPDTGLCQDSIPRWYYNPFS ERCSRFTYGGCDGNKNNFEEEQQCLESCRGISKKDVFGLRRESSIPNVGSVEVAIAVLLVTCIV VVLTVLGYCCFKNQRKGFRRHRHPPPTPASSTVSTAEDTEHLVYNHTTRPL hide sequence

RefSeq Acc Id:	XP_013368079 ⟸ XM_013512625
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VKR3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGAIAAAVWLLCALGRRAADAGLPPAPAELPTGASCLARFTSGVPAFVLDTEASVSNGATFLG SPAARRGWDCVRACCATQSCNLALVELQPDGGEDAISACFLMNCVYEQNFVCKFARRDGFINYL TQEVYRSYRELQRQGFGGSRIPRAWVGIDLKVQPQEPLVLKDVGSTDWQLLQGDASVSIERKEL DQLELWGLKEGTYVFQLKAAGSDEPEGTANVTVTVLSAKQTEDYCLASSKVGRCRGAFPRWYYS PKEQICKRFIYGGCLGNKNNYLREEECMLACRDVQGPSMERQHPVCSGSCQPTQFRCSDGCCID SFLECDDTPDCPDGSDEATCEKYITGFDELQNIHLPSDKGHCVDLPDTGLCQDSIPRWYYNPFS ERCSRFTYGGCDGNKNNFEEEQQCLESCRGISKKDVFGLRRESSIPNVGSVEVAIAVLLVTCIV VVLTVLGYCCFKNQRKGFRRHRHPPPTPASSTVSTAEDTEHLVYNHTTRPL hide sequence

RefSeq Acc Id:

XP_013368078 ⟸ XM_013512624

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAGAIAAAVWLLCALGRRAADAGLPPAPAELPTGASCLARFTSGVPAFVLDTEASVSNGATFLG
SPAARRGWDCVRACCATQSCNLALVELQPDGGEDAISACFLMNCVYEQNFVCKFARRDGFINYL
TQEVYRSYRELQRQGFGGSRIPRAWVGIDLKVQPQEPLVLKDVGSTDWQLLQGDASVSIERKEL
DQLELWGLKEGTYVFQLKAAGSDEPEGTANVTVTVLSAKQTEDYCLASSKVGRCRGAFPRWYYS
PKEQICKRFIYGGCLGNKNNYLREEECMLACRDVQGPSMERQHPVCSGSCQPTQFRCSDGCCID
SFLECDDTPDCPDGSDEATCEKYITGFDELQNIHLPSDKGHCVDLPDTGLCQDSIPRWYYNPFS
ERCSRFTYGGCDGNKNNFEEEQQCLESCRGISSEPGGGLGEGCVWAAAGELHSQRRLSGSGDCC
TPGHLHCSGADRPGLLLLQEPEEGLPQAPPPPAHARQLHRLHRRGHRAPGL

hide sequence

Ensembl Acc Id:

ENSCLAP00000017077 ⟸ ENSCLAT00000017245

Protein Domains

BPTI/Kunitz inhibitor MANSC

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000011721	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000017245	ENTREZGENE
	ENSCLAT00000017245.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
	4.10.400.10	UniProtKB/TrEMBL
	4.10.410.10	UniProtKB/TrEMBL
InterPro	Ig-like_fold	UniProtKB/TrEMBL
	Kunitz_BPTI	UniProtKB/TrEMBL
	Kunitz_BPTI_sf	UniProtKB/TrEMBL
	LDL_receptor-like_sf	UniProtKB/TrEMBL
	LDLR_class-A_CS	UniProtKB/TrEMBL
	LDrepeatLR_classA_rpt	UniProtKB/TrEMBL
	MANSC_dom	UniProtKB/TrEMBL
	MANSC_N	UniProtKB/TrEMBL
	Prtase_inh_Kunz-CS	UniProtKB/TrEMBL
NCBI Gene	Spint1	ENTREZGENE
PANTHER	KUNITZ-TYPE PROTEASE INHIBITOR 1	UniProtKB/TrEMBL
	PTHR46750	UniProtKB/TrEMBL
Pfam	K319L-like_PKD	UniProtKB/TrEMBL
	Kunitz_BPTI	UniProtKB/TrEMBL
	Ldl_recept_a	UniProtKB/TrEMBL
	MANEC	UniProtKB/TrEMBL
PRINTS	BASICPTASE	UniProtKB/TrEMBL
PROSITE	BPTI_KUNITZ_1	UniProtKB/TrEMBL
	BPTI_KUNITZ_2	UniProtKB/TrEMBL
	LDLRA_1	UniProtKB/TrEMBL
	LDLRA_2	UniProtKB/TrEMBL
	MANSC	UniProtKB/TrEMBL
SMART	LDLa	UniProtKB/TrEMBL
	MANEC	UniProtKB/TrEMBL
	SM00131	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57362	UniProtKB/TrEMBL
	SSF57424	UniProtKB/TrEMBL
UniProt	A0A8C2VKR3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar