Spint1 (serine peptidase inhibitor, Kunitz type 1)

Gene: Spint1 (serine peptidase inhibitor, Kunitz type 1) Ictidomys tridecemlineatus

Analyze

Symbol:

Spint1

Name:

serine peptidase inhibitor, Kunitz type 1

RGD ID:

12590696

Description:

ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to BMP stimulus (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); biliary atresia (ortholog); Bloom syndrome (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

kunitz-type protease inhibitor 1; serine peptidase inhibitor, Kunitz type 1, transcript variant X1; serine peptidase inhibitor, Kunitz type 1, transcript variant X2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	86,390,799 - 86,403,274 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	4,238,845 - 4,251,350 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	4,238,883 - 4,251,291 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

biliary atresia (ISO)

Bloom syndrome (ISO)

breast cancer (ISO)

cholestasis (ISO)

colorectal cancer (ISO)

Colorectal Neoplasms (ISO)

genetic disease (ISO)

ichthyosis (ISO)

liver cirrhosis (ISO)

ovarian cancer (ISO)

primary biliary cholangitis (ISO)

prostate carcinoma (ISO)

stomach carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

branching involved in labyrinthine layer morphogenesis (IEA,ISO)

cellular response to BMP stimulus (ISO)

embryonic placenta development (IEA,ISO)

epidermis development (IEA)

epithelium development (IEA)

extracellular matrix organization (IEA,ISO)

negative regulation of neural precursor cell proliferation (ISO)

neural tube closure (IEA,ISO)

placenta blood vessel development (IEA,ISO)

positive regulation of glial cell differentiation (ISO)

Cellular Component

membrane (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

serine-type endopeptidase inhibitor activity (IEA,ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Spint1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	86,390,799 - 86,403,274 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	4,238,845 - 4,251,350 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	4,238,883 - 4,251,291 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPINT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	40,844,048 - 40,858,207 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	40,844,018 - 40,858,207 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	41,136,246 - 41,150,405 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	38,923,538 - 38,937,145 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	17,904,155 - 17,917,761 (+)	NCBI		Celera
Cytogenetic Map	15	q15.1	NCBI
HuRef	15	17,956,043 - 17,998,087 (+)	NCBI		HuRef
CHM1_1	15	41,254,190 - 41,267,796 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	38,650,076 - 38,664,232 (+)	NCBI		T2T-CHM13v2.0

Spint1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	119,067,841 - 119,079,995 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	119,067,843 - 119,080,008 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	119,237,360 - 119,249,535 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	119,237,362 - 119,249,527 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	119,063,096 - 119,075,250 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	118,928,918 - 118,940,633 (+)	NCBI		MGSCv36	mm8
Celera	2	120,387,921 - 120,400,196 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	59.97	NCBI

Spint1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	126,685,017 - 126,697,957 (+)	NCBI		GRCr8
mRatBN7.2	3	106,231,082 - 106,244,121 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	106,231,444 - 106,244,119 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	109,904,232 - 109,916,890 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	118,499,779 - 118,512,434 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	116,160,160 - 116,172,815 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	111,049,132 - 111,061,991 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	111,049,118 - 111,062,011 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	117,599,717 - 117,612,635 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	105,757,666 - 105,770,345 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	105,654,093 - 105,666,772 (+)	NCBI
Celera	3	105,144,668 - 105,157,338 (+)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

Spint1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	7,715,536 - 7,729,158 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	7,715,536 - 7,728,759 (+)	NCBI	ChiLan1.0	ChiLan1.0

SPINT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	30,086,766 - 30,100,403 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	34,238,095 - 34,251,732 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	19,786,621 - 19,800,297 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	38,036,638 - 38,050,303 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	38,036,638 - 38,050,303 (+)	Ensembl	panpan1.1		panPan2

SPINT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	7,976,094 - 7,989,019 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	7,975,235 - 7,988,339 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	8,030,789 - 8,043,874 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	8,104,320 - 8,117,280 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	8,104,237 - 8,117,684 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	8,026,984 - 8,039,921 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	8,134,558 - 8,147,504 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	8,264,088 - 8,277,146 (+)	NCBI		UU_Cfam_GSD_1.0

SPINT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	130,458,909 - 130,473,783 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	130,458,909 - 130,473,791 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	145,616,937 - 145,631,763 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPINT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	42,136,749 - 42,150,125 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	42,134,536 - 42,150,118 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	98,833,369 - 98,846,726 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spint1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	8,093,346 - 8,106,193 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624804	8,092,700 - 8,105,478 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005316417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021725810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040275156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000000364 ⟹ ENSSTOP00000000327

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	4,238,845 - 4,251,350 (+)	Ensembl

RefSeq Acc Id:

XM_005316417 ⟹ XP_005316474

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	86,390,803 - 86,403,274 (+)	NCBI
SpeTri2.0	NW_004936471	4,238,883 - 4,251,291 (+)	NCBI

Sequence:

show sequence

TTAATGTCCGCTCCGCCCCGGCCGCGCTGACTCAGTTTCACCAGAAACTAGGGGGTGGCGGTGG
CAGATCCCGAGAGCACTCGGCACCCCGGCAGAAGCCGCGGCCTGAGCCGCGCAGGAAACCAGGC
CCGGATCCTCGGCAGGCCAGGCCCCACCCCGCTCACCTGCCCAGGTAACCGGGGCCCTGGAGCG
CGAGGCGGAGGCGGAGGCGGAGCGGGCTCGGAGCATGTTTGGCCGTTTGTTTGGCACCTGTACG
TGCGTCCGGGTCACAAGTACCCTCAGAACCCAGAGGCTCGCACTGTGAAGGTGACTCCCCCCGC
CCCCCCAACCCCGGGGAAGAGGGCGACGGCCCCTGGGAGGACGATGGCCGGCGCTCGCCTTGCC
CAGGCCGGCATCCCTGTGGTCCTTGAGGTGTTGCTTCTGTGCGTGCTGGGTCTCCAGATCACTG
AGGCCGGGCTGCCTCCCGCACCCCCTGAGCTGCCGGCGGGAACTGCCTGTCTGAACCTCTTCAC
TCCGGGGGTTCCTGCCTTCGTGCTGGACACGGAAGCCTCGGTCAGCAACGGGGCCACCTTTCTG
GGTTCCCCCACCGTGCGCCGGGGCTGGGATTGCGTGCGCTCCTGTTGCACCACCCAGAATTGCA
ACCTGGCGCTGGTGGAACTGCAGCCCGACGGCGGCGAGGACGCCATCACCGCCTGCTTCCTCAT
GAATTGCCTCTACGAGCACAACTTTGTGTGCAAGTTCGCGCGCAGAGAGGGCTTCATCAACTAC
CTCACTAGAGAGGTTTACCACTCGTACCACGAGCTTCGGACCCAGGGCTTTGGAGGGTCCCGGA
TCCCAAGGGCCTGGGTGGGCATAGACTTGAAGGTGCAGCCCCAGGAACCCCTGGTGCTAAAGGA
TGTGGAAAACATAGATTGGCATCTACTGCAGGGTGGCACAGACGTCAGGATAGAGAGGAACAAT
CCGGACCAGGTGGAGCTGTGGGGACTCAAGGAAGGCACCTACCTGTTCCAGTTGACAGTGACTG
GCTCAGAACAACCAGAGAATAAGGCCAACGTCACAGTCACTGTGCTATCTGCCAAGCAGACAGA
AGATTATTGCCTTGCATCTAACAAGGTGGGCCGCTGCCGGGGTTCCTTCCCCCGCTGGTACTAT
GACCCCACAGAACAAATCTGCAAGAGATTCACTTATGGAGGTTGCTTAGGCAACAAGAACAACT
ACCTTCGGGAAGAAGAGTGTATGCTAGCCTGCCGGAATGTGCAAGGCCCCTCAATGGAAAGGCA
CCATCCAGTATGTTCTGGCAGCTGCCACTCCACCCAATTTCGCTGCAGTAATGGCTGCTGCATC
GACAGCTTCCTGGAGTGTGATGACACCCCAGACTGCCCTGACGGCTCTGATGAGGCCACCTGTG
AAAAATACACCAGTGGCTTTGATGAGCTCCAGAGTATCCATTTCCTCAGTGACAAAGGGCACTG
TGTGGACCTGCCAGACACAGGACTCTGCCAGGAGAGCATCCCACGCTGGTACTACAACCCTTTC
AGTGAACGCTGTGCCCGCTTCACTTATGGTGGTTGTTATGGCAACAAGAACAACTTTGAGGAAG
AGCAGCAGTGTCTCGAGTCCTGTCACGGCATCTCCAAGAAAGATGTGTTTGGTCTGCGACGGGA
AAGCTCCATCTCCAGTGTAGGCTCTGTGGAAGTGGCTGTTGCTGTACTCCTGGTCACCTGCATC
ATCATGGTGATAGCCATCCTGGGTTATTGGTGCTTCAAGAACCAGAGACAGGACTTGCGCAGAC
ATCACCACCTGAATCACCCACCACCCACCCCTGCTAGCTCCACTGTCTCCACCACTGAAGACAC
AGAGCACCTGGTCTATAATCATACCACCCGACCCCTCTGAGCCTGGGGCTCTTGCCATCTCTCA
CCAGGCCCTGCTTCCTGCTTACCAAGACAGAGGCCTGGACTGGGGAAAACTTTGGGACAAGACT
CCTGCCTGTTTTCCAAGCACATTCTGCCTCAGAAGCCAGGGCTTTAGCTGTCTTGGAAGCCTCT
GGGCTCAGGCTAGTTGTTTCTGAGAAAACACAAGGGTCTGAGAGAAGCAAAAAATCCTTGAACC
AGGAGTATTGTGCATAGAAGGACCTGCCCTGCCTAGGGGTTCAGAGGAAGTTGGAGTTTTGGGT
CCTGGTTGAAACTGCCTGCCCCCACCCCATGGTGCCTGGGATGGTGTCAGAAGCTGGAGGCCCC
AGTGTCTTCCACAGCTGCCCTTCCACTACACGGTCCAGAGCTGGAAGGAAGGACTTCTCTATGT
AGTTAGTGTTGTAAAGTATTGCTTTTGGGGGCTGGAGGCATAGATCAGTGCTAGAGTGTGTGCT
AAATGCTTACCATGCACAAAGCCCTGGATTCTATGCCCAGTGTTGGGGAGGGGAAATTTTAAAA
AAGCTTTTTGTTTATTTAATGCCCTAGGGGTAGGGGAGAAGACAAATGGAAGGAATGTCTTCCT
TTGCCTTCTTTCTTCCTTTTCCCTTGAGGTTGAACTCTGCCCTTGACCAGCCCCTGAATCCCCA
GTCCCTAATCCCAGGGCTCTCTGACATCACACCACCAACCCCTCCTCGATTTCCCACAAATCCA
ATTCACTCACAGTGTGATAAAATGGTTTGTGAGGCTGGGGTGTAGCTCAGTGGTGGAGTGCTTG
CCTAGCATGCATGAGGCCCTGG

hide sequence

RefSeq Acc Id:

XM_021725810 ⟹ XP_021581485

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	86,390,803 - 86,403,274 (+)	NCBI
SpeTri2.0	NW_004936471	4,238,940 - 4,251,291 (+)	NCBI

Sequence:

show sequence

GCGGTGGCAGATCCCGAGAGCACTCGGCACCCCGGCAGAAGCCGCGGCCTGAGCCGCGCAGGAA
ACCAGGCCCGGATCCTCGGCAGGCCAGGCCCCACCCCGCTCACCTGCCCAGGTCACAAGTACCC
TCAGAACCCAGAGGCTCGCACTGTGAAGGTGACTCCCCCCGCCCCCCCAACCCCGGGGAAGAGG
GCGACGGCCCCTGGGAGGACGATGGCCGGCGCTCGCCTTGCCCAGGCCGGCATCCCTGTGGTCC
TTGAGGTGTTGCTTCTGTGCGTGCTGGGTCTCCAGATCACTGAGGCCGGGCTGCCTCCCGCACC
CCCTGAGCTGCCGGCGGGAACTGCCTGTCTGAACCTCTTCACTCCGGGGGTTCCTGCCTTCGTG
CTGGACACGGAAGCCTCGGTCAGCAACGGGGCCACCTTTCTGGGTTCCCCCACCGTGCGCCGGG
GCTGGGATTGCGTGCGCTCCTGTTGCACCACCCAGAATTGCAACCTGGCGCTGGTGGAACTGCA
GCCCGACGGCGGCGAGGACGCCATCACCGCCTGCTTCCTCATGAATTGCCTCTACGAGCACAAC
TTTGTGTGCAAGTTCGCGCGCAGAGAGGGCTTCATCAACTACCTCACTAGAGAGGTTTACCACT
CGTACCACGAGCTTCGGACCCAGGGCTTTGGAGGGTCCCGGATCCCAAGGGCCTGGGTGGGCAT
AGACTTGAAGGTGCAGCCCCAGGAACCCCTGGTGCTAAAGGATGTGGAAAACATAGATTGGCAT
CTACTGCAGGGTGGCACAGACGTCAGGATAGAGAGGAACAATCCGGACCAGGTGGAGCTGTGGG
GACTCAAGGAAGGCACCTACCTGTTCCAGTTGACAGTGACTGGCTCAGAACAACCAGAGAATAA
GGCCAACGTCACAGTCACTGTGCTATCTGCCAAGCAGACAGAAGATTATTGCCTTGCATCTAAC
AAGGTGGGCCGCTGCCGGGGTTCCTTCCCCCGCTGGTACTATGACCCCACAGAACAAATCTGCA
AGAGATTCACTTATGGAGGTTGCTTAGGCAACAAGAACAACTACCTTCGGGAAGAAGAGTGTAT
GCTAGCCTGCCGGAATGTGCAAGGCCCCTCAATGGAAAGGCACCATCCAGTATGTTCTGGCAGC
TGCCACTCCACCCAATTTCGCTGCAGTAATGGCTGCTGCATCGACAGCTTCCTGGAGTGTGATG
ACACCCCAGACTGCCCTGACGGCTCTGATGAGGCCACCTGTGAAAAATACACCAGTGGCTTTGA
TGAGCTCCAGAGTATCCATTTCCTCAGTGACAAAGGGCACTGTGTGGACCTGCCAGACACAGGA
CTCTGCCAGGAGAGCATCCCACGCTGGTACTACAACCCTTTCAGTGAACGCTGTGCCCGCTTCA
CTTATGGTGGTTGTTATGGCAACAAGAACAACTTTGAGGAAGAGCAGCAGTGTCTCGAGTCCTG
TCACGGCATCTCCAAGAAAGATGTGTTTGGTCTGCGACGGGAAAGCTCCATCTCCAGTGTAGGC
TCTGTGGAAGTGGCTGTTGCTGTACTCCTGGTCACCTGCATCATCATGGTGATAGCCATCCTGG
GTTATTGGTGCTTCAAGAACCAGAGACAGGACTTGCGCAGACATCACCACCTGAATCACCCACC
ACCCACCCCTGCTAGCTCCACTGTCTCCACCACTGAAGACACAGAGCACCTGGTCTATAATCAT
ACCACCCGACCCCTCTGAGCCTGGGGCTCTTGCCATCTCTCACCAGGCCCTGCTTCCTGCTTAC
CAAGACAGAGGCCTGGACTGGGGAAAACTTTGGGACAAGACTCCTGCCTGTTTTCCAAGCACAT
TCTGCCTCAGAAGCCAGGGCTTTAGCTGTCTTGGAAGCCTCTGGGCTCAGGCTAGTTGTTTCTG
AGAAAACACAAGGGTCTGAGAGAAGCAAAAAATCCTTGAACCAGGAGTATTGTGCATAGAAGGA
CCTGCCCTGCCTAGGGGTTCAGAGGAAGTTGGAGTTTTGGGTCCTGGTTGAAACTGCCTGCCCC
CACCCCATGGTGCCTGGGATGGTGTCAGAAGCTGGAGGCCCCAGTGTCTTCCACAGCTGCCCTT
CCACTACACGGTCCAGAGCTGGAAGGAAGGACTTCTCTATGTAGTTAGTGTTGTAAAGTATTGC
TTTTGGGGGCTGGAGGCATAGATCAGTGCTAGAGTGTGTGCTAAATGCTTACCATGCACAAAGC
CCTGGATTCTATGCCCAGTGTTGGGGAGGGGAAATTTTAAAAAAGCTTTTTGTTTATTTAATGC
CCTAGGGGTAGGGGAGAAGACAAATGGAAGGAATGTCTTCCTTTGCCTTCTTTCTTCCTTTTCC
CTTGAGGTTGAACTCTGCCCTTGACCAGCCCCTGAATCCCCAGTCCCTAATCCCAGGGCTCTCT
GACATCACACCACCAACCCCTCCTCGATTTCCCACAAATCCAATTCACTCACAGTGTGATAAAA
TGGTTTGTGAGGCTGGGGTGTAGCTCAGTGGTGGAGTGCTTGCCTAGCATGCATGAGGCCCTGG

hide sequence

RefSeq Acc Id:

XM_040275156 ⟹ XP_040131090

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	86,390,799 - 86,403,274 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005316474	(Get FASTA)	NCBI Sequence Viewer
	XP_021581485	(Get FASTA)	NCBI Sequence Viewer
	XP_040131090	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000000327.2
GenBank Protein	KAG3261631	(Get FASTA)	NCBI Sequence Viewer
	KAG3261632	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005316474 ⟸ XM_005316417
- Peptide Label:	isoform X1
- UniProtKB:	I3LWH2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGARLAQAGIPVVLEVLLLCVLGLQITEAGLPPAPPELPAGTACLNLFTPGVPAFVLDTEASV SNGATFLGSPTVRRGWDCVRSCCTTQNCNLALVELQPDGGEDAITACFLMNCLYEHNFVCKFAR REGFINYLTREVYHSYHELRTQGFGGSRIPRAWVGIDLKVQPQEPLVLKDVENIDWHLLQGGTD VRIERNNPDQVELWGLKEGTYLFQLTVTGSEQPENKANVTVTVLSAKQTEDYCLASNKVGRCRG SFPRWYYDPTEQICKRFTYGGCLGNKNNYLREEECMLACRNVQGPSMERHHPVCSGSCHSTQFR CSNGCCIDSFLECDDTPDCPDGSDEATCEKYTSGFDELQSIHFLSDKGHCVDLPDTGLCQESIP RWYYNPFSERCARFTYGGCYGNKNNFEEEQQCLESCHGISKKDVFGLRRESSISSVGSVEVAVA VLLVTCIIMVIAILGYWCFKNQRQDLRRHHHLNHPPPTPASSTVSTTEDTEHLVYNHTTRPL hide sequence

RefSeq Acc Id:	XP_021581485 ⟸ XM_021725810
- Peptide Label:	isoform X1
- UniProtKB:	I3LWH2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGARLAQAGIPVVLEVLLLCVLGLQITEAGLPPAPPELPAGTACLNLFTPGVPAFVLDTEASV SNGATFLGSPTVRRGWDCVRSCCTTQNCNLALVELQPDGGEDAITACFLMNCLYEHNFVCKFAR REGFINYLTREVYHSYHELRTQGFGGSRIPRAWVGIDLKVQPQEPLVLKDVENIDWHLLQGGTD VRIERNNPDQVELWGLKEGTYLFQLTVTGSEQPENKANVTVTVLSAKQTEDYCLASNKVGRCRG SFPRWYYDPTEQICKRFTYGGCLGNKNNYLREEECMLACRNVQGPSMERHHPVCSGSCHSTQFR CSNGCCIDSFLECDDTPDCPDGSDEATCEKYTSGFDELQSIHFLSDKGHCVDLPDTGLCQESIP RWYYNPFSERCARFTYGGCYGNKNNFEEEQQCLESCHGISKKDVFGLRRESSISSVGSVEVAVA VLLVTCIIMVIAILGYWCFKNQRQDLRRHHHLNHPPPTPASSTVSTTEDTEHLVYNHTTRPL hide sequence

RefSeq Acc Id:	XP_040131090 ⟸ XM_040275156
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSSTOP00000000327 ⟸ ENSSTOT00000000364

Protein Domains

BPTI/Kunitz inhibitor MANSC

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000000365	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000000364.3	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
	4.10.400.10	UniProtKB/TrEMBL
	4.10.410.10	UniProtKB/TrEMBL
InterPro	Ig-like_fold	UniProtKB/TrEMBL
	Kunitz_BPTI	UniProtKB/TrEMBL
	Kunitz_BPTI_sf	UniProtKB/TrEMBL
	LDL_receptor-like_sf	UniProtKB/TrEMBL
	LDLR_class-A_CS	UniProtKB/TrEMBL
	LDrepeatLR_classA_rpt	UniProtKB/TrEMBL
	MANSC_dom	UniProtKB/TrEMBL
	MANSC_N	UniProtKB/TrEMBL
	Prtase_inh_Kunz-CS	UniProtKB/TrEMBL
NCBI Gene	Spint1	ENTREZGENE
PANTHER	KUNITZ-TYPE PROTEASE INHIBITOR 1	UniProtKB/TrEMBL
	PTHR46750	UniProtKB/TrEMBL
Pfam	Kunitz_BPTI	UniProtKB/TrEMBL
	Ldl_recept_a	UniProtKB/TrEMBL
	MANEC	UniProtKB/TrEMBL
PRINTS	BASICPTASE	UniProtKB/TrEMBL
PROSITE	BPTI_KUNITZ_1	UniProtKB/TrEMBL
	BPTI_KUNITZ_2	UniProtKB/TrEMBL
	LDLRA_1	UniProtKB/TrEMBL
	LDLRA_2	UniProtKB/TrEMBL
	MANSC	UniProtKB/TrEMBL
SMART	LDLa	UniProtKB/TrEMBL
	MANEC	UniProtKB/TrEMBL
	SM00131	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57362	UniProtKB/TrEMBL
	SSF57424	UniProtKB/TrEMBL
UniProt	I3LWH2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar