PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: DNA damage response pathway
Accession: PW:0001360
browse the term
Definition: The response mechanism/pathways that assure the maintenance of genomic integrity. This involves detection of DNA damage, signaling and amplification of the signal leading to activation of effectors and resulting in repair of damage, cell cycle arrest or, if necessary, cell death. Such response mechanism/pathways may operate collectively with some of their components being shared.
Synonyms: related_synonym: DDR pathway
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Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mbd4
methyl-CpG binding domain 4, DNA glycosylase
ISO
in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP
RGD
PMID:24004570
RGD:9588971
NCBI chrNW_004955429:17,858,656...17,868,111
Ensembl chrNW_004955429:17,858,937...17,869,262
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mlh1
mutL homolog 1
ISO
RGD
PMID:11900875 PMID:19078924
RGD:2306714 RGD:4143515
NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
G
Msh2
mutS homolog 2
ISO
RGD
PMID:11900875
RGD:2306714
NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
G
Msh6
mutS homolog 6
ISO
RGD
PMID:11900875 PMID:19078924
RGD:2306714 RGD:4143515
NCBI chrNW_004955441:14,451,207...14,471,316
Ensembl chrNW_004955441:14,451,307...14,471,227
G
Pms1
PMS1 homolog 1, mismatch repair system component
ISO
RGD
PMID:11900875
RGD:2306714
NCBI chrNW_004955403:9,021,488...9,100,442
Ensembl chrNW_004955403:9,022,078...9,100,442
G
Pms2
PMS1 homolog 2, mismatch repair system component
ISO
RGD
PMID:11900875
RGD:2306714
NCBI chrNW_004955460:13,762,854...13,791,462
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ddb1
damage specific DNA binding protein 1
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
G
Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599
G
Ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955459:3,210,936...3,238,401
Ensembl chrNW_004955459:3,210,479...3,242,576
G
Ercc4
ERCC excision repair 4, endonuclease catalytic subunit
ISO
in silico assessment of alteration of DNA-protein, protein-protein interactions and observed reduction of DNA repair capacity in the context of nucleotide excision repair pathway for SNP
RGD
PMID:22824526 PMID:24004570
RGD:7246919 RGD:9588971
NCBI chrNW_004955442:4,833,453...4,861,201
Ensembl chrNW_004955442:4,831,721...4,861,122
G
Ercc5
ERCC excision repair 5, endonuclease
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955404:8,294,506...8,321,505
Ensembl chrNW_004955404:8,294,346...8,321,112
G
Ercc6
ERCC excision repair 6, chromatin remodeling factor
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
G
Xpa
XPA, DNA damage recognition and repair factor
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955419:27,751,042...27,774,917
Ensembl chrNW_004955419:27,751,043...27,774,917
G
Xpc
XPC complex subunit, DNA damage recognition and repair factor
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955429:16,935,901...16,968,285
Ensembl chrNW_004955429:16,935,901...16,955,845
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Actl6a
actin like 6A
ISO
RGD
PMID:23355908
RGD:8694154
NCBI chrNW_004955420:8,745,390...8,764,993
Ensembl chrNW_004955420:8,744,597...8,764,993
G
Arid1a
AT-rich interaction domain 1A
ISO
RGD
PMID:23355908
RGD:8694154
NCBI chrNW_004955452:6,068,631...6,120,759
Ensembl chrNW_004955452:6,068,631...6,120,759
G
Arid1b
AT-rich interaction domain 1B
ISO
RGD
PMID:23355908
RGD:8694154
NCBI chrNW_004955439:5,041,111...5,454,692
Ensembl chrNW_004955439:5,043,967...5,412,741
G
Pbrm1
polybromo 1
ISO
RGD
PMID:23355908
RGD:8694154
NCBI chrNW_004955430:2,536,086...2,671,094
Ensembl chrNW_004955430:2,536,086...2,670,617
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
ISO
RGD
PMID:23355908
RGD:8694154
NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Atm
ATM serine/threonine kinase
ISO
RGD
PMID:21533982 PMID:23532176
RGD:8661225 RGD:8661232
NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
G
Baz1b
bromodomain adjacent to zinc finger domain 1B
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955456:14,185,091...14,242,391
Ensembl chrNW_004955456:14,185,107...14,240,688
G
Brca1
BRCA1 DNA repair associated
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
G
Brcc3
BRCA1/BRCA2-containing complex subunit 3
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955594:551,407...613,772
Ensembl chrNW_004955594:554,081...613,661
G
Eya1
EYA transcriptional coactivator and phosphatase 1
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955444:8,336,071...8,655,041
Ensembl chrNW_004955444:8,495,530...8,655,100
G
Eya3
EYA transcriptional coactivator and phosphatase 3
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955452:7,148,762...7,273,886
Ensembl chrNW_004955452:7,150,886...7,255,159
G
Kat5
lysine acetyltransferase 5
ISO
RGD
PMID:21533982 PMID:23532176
RGD:8661225 RGD:8661232
NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
G
Kdm4a
lysine demethylase 4A
ISO
RGD
PMID:24002223 PMID:24326623
RGD:8661237 RGD:8661242
NCBI chrNW_004955537:3,199,394...3,255,945
Ensembl chrNW_004955537:3,199,394...3,255,945
G
L3mbtl1
L3MBTL histone methyl-lysine binding protein 1
ISO
RGD
PMID:24002223 PMID:24326623
RGD:8661237 RGD:8661242
NCBI chrNW_004955445:13,621,007...13,645,809
Ensembl chrNW_004955445:13,621,791...13,645,799
G
LOC102025775
histone H2AX
ISO
RGD
PMID:21533982 PMID:24002223
RGD:8661232 RGD:8661242
NCBI chrNW_004955412:20,203,173...20,204,714
Ensembl chrNW_004955412:20,203,772...20,204,203
G
Mdc1
mediator of DNA damage checkpoint 1
ISO
RGD
PMID:21533982 PMID:24002223
RGD:8661232 RGD:8661242
NCBI chrNW_004955583:688,288...722,393
G
Nbn
nibrin
ISO
RGD
PMID:21533982
RGD:8661232
NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
G
Otub1
OTU deubiquitinase, ubiquitin aldehyde binding 1
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955422:21,047,184...21,055,596
Ensembl chrNW_004955422:21,047,184...21,055,616
G
Pias1
protein inhibitor of activated STAT 1
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955450:7,896,741...7,991,045
Ensembl chrNW_004955450:7,896,741...7,991,027
G
Pias4
protein inhibitor of activated STAT 4
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955495:4,760,576...4,791,422
Ensembl chrNW_004955495:4,761,862...4,791,490
G
Ppm1d
protein phosphatase, Mg2+/Mn2+ dependent 1D
ISO
RGD
PMID:21533982 PMID:24002223
RGD:8661232 RGD:8661242
NCBI chrNW_004955451:1,878,110...1,915,794
Ensembl chrNW_004955451:1,878,629...1,915,654
G
Ppp2ca
protein phosphatase 2 catalytic subunit alpha
ISO
RGD
PMID:21533982 PMID:24002223
RGD:8661232 RGD:8661242
NCBI chrNW_004955408:5,435,117...5,460,361
Ensembl chrNW_004955408:5,433,268...5,460,361
G
Ppp4c
protein phosphatase 4 catalytic subunit
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955493:6,894,849...6,901,344
Ensembl chrNW_004955493:6,894,849...6,901,344
G
Ppp5c
protein phosphatase 5 catalytic subunit
ISO
RGD
PMID:21533982
RGD:8661232
NCBI chrNW_004955574:523,044...545,461
Ensembl chrNW_004955574:523,005...546,923
G
Ppp6c
protein phosphatase 6 catalytic subunit
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955419:3,096,882...3,133,590
Ensembl chrNW_004955419:3,096,240...3,134,215
G
Psmd14
proteasome 26S subunit, non-ATPase 14
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955449:12,306,026...12,400,908
G
Pwwp3a
PWWP domain containing 3A, DNA repair factor
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955495:6,552,305...6,574,191
Ensembl chrNW_004955495:6,552,584...6,573,016
G
Rad50
RAD50 double strand break repair protein
ISO
RGD
PMID:21533982
RGD:8661232
NCBI chrNW_004955408:3,953,801...4,035,494
Ensembl chrNW_004955408:3,953,800...4,035,494
G
Rbbp8
RB binding protein 8, endonuclease
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955402:11,245,857...11,331,872
Ensembl chrNW_004955402:11,245,819...11,335,367
G
Rif1
replication timing regulatory factor 1
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748
G
Rnf168
ring finger protein 168
ISO
RGD
PMID:21533982 PMID:24326623
RGD:8661232 RGD:8661237
NCBI chrNW_004955420:12,656,815...12,676,836
Ensembl chrNW_004955420:12,657,272...12,676,426
G
Rnf20
ring finger protein 20
ISO
RGD
PMID:23532176
RGD:8661225
NCBI chrNW_004955419:24,273,714...24,299,454
Ensembl chrNW_004955419:24,273,714...24,299,460
G
Rnf4
ring finger protein 4
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955514:1,501,943...1,525,689
Ensembl chrNW_004955514:1,511,062...1,523,714
G
Rnf40
ring finger protein 40
ISO
RGD
PMID:23532176
RGD:8661225
NCBI chrNW_004955493:7,627,189...7,640,711
Ensembl chrNW_004955493:7,627,189...7,640,711
G
Rnf8
ring finger protein 8
ISO
RGD
PMID:21533982 PMID:24326623
RGD:8661232 RGD:8661237
NCBI chrNW_004955437:5,807,592...5,832,213
Ensembl chrNW_004955437:5,809,082...5,832,057
G
Tp53bp1
tumor protein p53 binding protein 1
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278
G
Trip12
thyroid hormone receptor interactor 12
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955453:5,132,776...5,272,250
Ensembl chrNW_004955453:5,134,016...5,271,399
G
Ube2n
ubiquitin conjugating enzyme E2 N
ISO
RGD
PMID:21533982 PMID:24326623
RGD:8661232 RGD:8661237
NCBI chrNW_004955405:30,240,402...30,278,362
Ensembl chrNW_004955405:30,240,408...30,278,360
G
Ubr5
ubiquitin protein ligase E3 component n-recognin 5
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005
G
Usp16
ubiquitin specific peptidase 16
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955407:28,375,246...28,413,279
G
Usp3
ubiquitin specific peptidase 3
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955450:11,729,433...11,802,462
Ensembl chrNW_004955450:11,727,104...11,802,462
G
Usp44
ubiquitin specific peptidase 44
ISO
RGD
PMID:24002223
RGD:8661242
NCBI chrNW_004955405:31,977,045...32,006,733
Ensembl chrNW_004955405:31,977,602...32,006,810
G
Vcp
valosin containing protein
ISO
RGD
PMID:24002223 PMID:24326623
RGD:8661237 RGD:8661242
NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ogg1
8-oxoguanine DNA glycosylase
ISO
RGD
PMID:16221808
RGD:1578408
NCBI chrNW_004955561:1,277,362...1,282,949
Ensembl chrNW_004955561:1,277,365...1,282,793
G
Xrcc1
X-ray repair cross complementing 1
ISO
RGD
PMID:16221808
RGD:1578408
NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Chd3
chromodomain helicase DNA binding protein 3
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955467:9,024,112...9,050,062
Ensembl chrNW_004955467:9,029,265...9,050,718
G
Chd4
chromodomain helicase DNA binding protein 4
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955413:4,191,619...4,228,225
Ensembl chrNW_004955413:4,191,619...4,228,225
G
Chd5
chromodomain helicase DNA binding protein 5
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955486:6,320,380...6,369,020
Ensembl chrNW_004955486:6,320,380...6,369,065
G
Gatad2a
GATA zinc finger domain containing 2A
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955524:2,439,594...2,506,539
Ensembl chrNW_004955524:2,439,594...2,506,538
G
Gatad2b
GATA zinc finger domain containing 2B
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955545:424,997...519,031
Ensembl chrNW_004955545:430,245...517,790
G
Hdac1
histone deacetylase 1
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
G
Hdac2
histone deacetylase 2
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
G
Mbd2
methyl-CpG binding domain protein 2
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955402:38,761,668...38,829,830
Ensembl chrNW_004955402:38,767,419...38,830,204
G
Mbd3
methyl-CpG binding domain protein 3
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955495:6,385,449...6,388,911
Ensembl chrNW_004955495:6,336,367...6,389,056
G
Mta1
metastasis associated 1
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
G
Mta2
metastasis associated 1 family member 2
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955599:587,369...595,582
Ensembl chrNW_004955599:587,425...595,060
G
Mta3
metastasis associated 1 family member 3
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955441:9,965,727...10,108,467
Ensembl chrNW_004955441:9,965,500...10,108,467
G
Rbbp4
RB binding protein 4, chromatin remodeling factor
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955452:10,955,399...10,975,036
Ensembl chrNW_004955452:10,955,399...10,975,036
G
Rbbp7
RB binding protein 7, chromatin remodeling factor
ISO
RGD
PMID:24880148
RGD:9585661
NCBI chrNW_004955519:1,460,199...1,482,699
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Cxxc1
CXXC finger protein 1
ISO
RGD
PMID:23697932
RGD:9479164
NCBI chrNW_004955402:35,335,520...35,340,891
Ensembl chrNW_004955402:35,335,520...35,340,890
G
Dnmt1
DNA methyltransferase 1
ISO
RGD
PMID:22770212 PMID:24825349
RGD:8695943 RGD:8695944
NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462
G
Dnmt3a
DNA methyltransferase 3 alpha
ISO
RGD
PMID:22770212 PMID:24825349
RGD:8695943 RGD:8695944
NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059
G
Dnmt3b
DNA methyltransferase 3 beta
ISO
RGD
PMID:22770212 PMID:24825349
RGD:8695943 RGD:8695944
NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301
G
Ebf1
EBF transcription factor 1
ISO
RGD
PMID:24825349
RGD:8695944
NCBI chrNW_004955408:12,735,893...13,121,700
Ensembl chrNW_004955408:12,739,083...13,121,699
G
Kdm2a
lysine demethylase 2A
ISO
RGD
PMID:23697932
RGD:9479164
NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
G
Kdm2b
lysine demethylase 2B
ISO
RGD
PMID:23697932
RGD:9479164
NCBI chrNW_004955482:6,774,021...6,885,113
Ensembl chrNW_004955482:6,774,059...6,887,171
G
Kmt2a
lysine methyltransferase 2A
ISO
RGD
PMID:23697932
RGD:9479164
NCBI chrNW_004955412:19,586,435...19,670,149
Ensembl chrNW_004955412:19,586,141...19,665,527
G
Kmt2c
lysine methyltransferase 2C
ISO
RGD
PMID:23697932
RGD:9479164
NCBI chrNW_004955491:6,245,408...6,420,535
Ensembl chrNW_004955491:6,247,249...6,402,470
G
Mbd1
methyl-CpG binding domain protein 1
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955402:35,320,755...35,334,751
Ensembl chrNW_004955402:35,319,810...35,334,678
G
Mbd2
methyl-CpG binding domain protein 2
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955402:38,761,668...38,829,830
Ensembl chrNW_004955402:38,767,419...38,830,204
G
Mbd4
methyl-CpG binding domain 4, DNA glycosylase
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955429:17,858,656...17,868,111
Ensembl chrNW_004955429:17,858,937...17,869,262
G
Mecp2
methyl-CpG binding protein 2
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
G
Nanog
Nanog homeobox
ISO
RGD
PMID:24825349
RGD:8695944
NCBI chrNW_004955413:6,561,323...6,565,770
G
Ogt
O-linked N-acetylglucosamine (GlcNAc) transferase
ISO
RGD
PMID:24825349
RGD:8695944
NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
G
Pparg
peroxisome proliferator activated receptor gamma
ISO
RGD
PMID:24825349
RGD:8695944
NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
G
Prdm14
PR/SET domain 14
ISO
RGD
PMID:24825349
RGD:8695944
NCBI chrNW_004955444:9,606,310...9,626,772
Ensembl chrNW_004955444:9,612,059...9,626,817
G
Sin3a
SIN3 transcription regulator family member A
ISO
RGD
PMID:24825349
RGD:8695944
NCBI chrNW_004955450:2,804,551...2,870,450
Ensembl chrNW_004955450:2,808,130...2,870,450
G
Spi1
Spi-1 proto-oncogene
ISO
RGD
PMID:24825349
RGD:8695944
NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560
G
Tet1
tet methylcytosine dioxygenase 1
ISO
RGD
PMID:22770212 PMID:24825349
RGD:8695943 RGD:8695944
NCBI chrNW_004955425:20,767,406...20,857,165
G
Tet2
tet methylcytosine dioxygenase 2
ISO
RGD
PMID:22770212 PMID:24825349
RGD:8695943 RGD:8695944
NCBI chrNW_004955496:3,885,684...3,963,056
Ensembl chrNW_004955496:3,885,035...3,926,106
G
Tet3
tet methylcytosine dioxygenase 3
ISO
RGD
PMID:22770212 PMID:23697932 PMID:24825349
RGD:8695943 RGD:8695944 RGD:9479164
NCBI chrNW_004955424:11,612,124...11,722,130
Ensembl chrNW_004955424:11,617,993...11,714,203
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Uhrf1
ubiquitin like with PHD and ring finger domains 1
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955495:4,153,898...4,154,611
G
Uhrf2
ubiquitin like with PHD and ring finger domains 2
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955434:10,337,871...10,413,290
Ensembl chrNW_004955434:10,337,564...10,413,290
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Zbtb33
zinc finger and BTB domain containing 33
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955572:1,628,263...1,636,299
Ensembl chrNW_004955572:1,628,263...1,635,828
G
Zbtb38
zinc finger and BTB domain containing 38
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955508:4,260,716...4,297,435
Ensembl chrNW_004955508:4,260,716...4,297,435
G
Zbtb4
zinc finger and BTB domain containing 4
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955467:9,452,423...9,470,494
Ensembl chrNW_004955467:9,453,493...9,470,482
G
Zfp57
ZFP57 zinc finger protein
ISO
RGD
PMID:23324617
RGD:8695954
NCBI chrNW_004955583:151,338...154,827
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Aebp2
AE binding protein 2
ISO
RGD
PMID:24148750
RGD:9479059
NCBI chrNW_004955413:15,514,247...15,561,233
Ensembl chrNW_004955413:15,495,073...15,561,227
G
Aplf
aprataxin and PNKP like factor
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955424:16,338,546...16,449,074
Ensembl chrNW_004955424:16,336,228...16,448,766
G
Asf1a
anti-silencing function 1A histone chaperone
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955436:1,635,397...1,640,989
Ensembl chrNW_004955436:1,635,399...1,645,075
G
Asf1b
anti-silencing function 1B histone chaperone
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955415:32,818,592...32,828,651
Ensembl chrNW_004955415:32,817,547...32,828,651
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Ash1l
ASH1 like histone lysine methyltransferase
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955545:1,778,905...1,950,656
Ensembl chrNW_004955545:1,778,905...1,923,104
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Ash2l
ASH2 like, histone lysine methyltransferase complex subunit
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955463:13,731,651...13,757,475
Ensembl chrNW_004955463:13,731,506...13,761,684
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Bap1
BRCA1 associated deubiquitinase 1
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955430:2,391,970...2,400,645
Ensembl chrNW_004955430:2,390,524...2,400,645
G
Bmi1
BMI1 proto-oncogene, polycomb ring finger
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955429:6,548,586...6,553,730
Ensembl chrNW_004955429:6,547,731...6,558,105
G
Bptf
bromodomain PHD finger transcription factor
ISO
RGD
PMID:23642229 PMID:24686119
RGD:9479074 RGD:9479075
NCBI chrNW_004955478:6,990,816...7,088,751
Ensembl chrNW_004955478:6,990,833...7,086,721
G
Brcc3
BRCA1/BRCA2-containing complex subunit 3
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955594:551,407...613,772
Ensembl chrNW_004955594:554,081...613,661
G
Brd1
bromodomain containing 1
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955413:32,935,827...32,973,820
Ensembl chrNW_004955413:32,935,827...32,973,804
G
Brd2
bromodomain containing 2
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955437:1,584,890...1,592,486
Ensembl chrNW_004955437:1,584,479...1,592,826
G
Brd3
bromodomain containing 3
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955513:3,145,267...3,164,791
Ensembl chrNW_004955513:3,145,288...3,174,370
G
Brd4
bromodomain containing 4
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955495:7,959,033...7,989,216
Ensembl chrNW_004955495:7,957,510...7,988,498
G
Brd7
bromodomain containing 7
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955433:8,425,976...8,462,431
Ensembl chrNW_004955433:8,424,949...8,461,802
G
Brdt
bromodomain testis associated
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955423:2,434,146...2,498,523
Ensembl chrNW_004955423:2,431,192...2,494,906
G
Brf1
BRF1 general transcription factor IIIB subunit
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955538:3,469,322...3,544,704
Ensembl chrNW_004955538:3,470,249...3,544,704
G
Carm1
coactivator associated arginine methyltransferase 1
ISO
RGD
PMID:24583552
RGD:9479047
NCBI chrNW_004955495:1,983,599...2,002,174
Ensembl chrNW_004955495:1,983,599...2,002,174
G
Cbx2
chromobox 2
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955506:3,045,395...3,053,003
Ensembl chrNW_004955506:3,046,607...3,053,001
G
Cbx4
chromobox 4
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955506:2,998,241...3,002,788
Ensembl chrNW_004955506:2,998,237...3,002,788
G
Cbx5
chromobox 5
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955458:1,486,951...1,529,649
Ensembl chrNW_004955458:1,486,951...1,505,653
G
Cbx6
chromobox 6
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955413:24,955,721...24,966,015
Ensembl chrNW_004955413:24,955,721...24,966,973
G
Cbx7
chromobox 7
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955413:25,079,627...25,100,039
Ensembl chrNW_004955413:25,086,186...25,100,039
G
Cbx8
chromobox 8
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955506:3,035,510...3,038,204
Ensembl chrNW_004955506:3,035,621...3,040,354
G
Chaf1a
chromatin assembly factor 1 subunit A
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955495:4,467,317...4,499,419
Ensembl chrNW_004955495:4,468,202...4,499,171
G
Chaf1b
chromatin assembly factor 1 subunit B
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955407:35,601,992...35,618,287
Ensembl chrNW_004955407:35,602,819...35,617,917
G
Chd1
chromodomain helicase DNA binding protein 1
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955418:14,200,618...14,268,361
Ensembl chrNW_004955418:14,200,617...14,268,361
G
Crebbp
CREB binding protein
ISO
RGD
PMID:21151613 PMID:24686119
RGD:9104959 RGD:9479075
NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
G
Cxxc1
CXXC finger protein 1
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955402:35,335,520...35,340,891
Ensembl chrNW_004955402:35,335,520...35,340,890
G
Daxx
death domain associated protein
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955437:1,869,692...1,874,041
Ensembl chrNW_004955437:1,869,572...1,873,050
G
Dot1l
DOT1 like histone lysine methyltransferase
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955495:5,907,486...5,958,241
Ensembl chrNW_004955495:5,909,880...5,959,027
G
Dpf3
double PHD fingers 3
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955523:2,423,035...2,718,930
Ensembl chrNW_004955523:2,454,908...2,709,262
G
Dpy30
dpy-30 histone methyltransferase complex regulatory subunit
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955441:440,047...450,906
Ensembl chrNW_004955441:437,564...450,906
G
Ehmt1
euchromatic histone lysine methyltransferase 1
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955513:5,491,446...5,642,559
Ensembl chrNW_004955513:5,547,313...5,641,499
G
Ehmt2
euchromatic histone lysine methyltransferase 2
ISO
RGD
PMID:23200123 PMID:23642229
RGD:7242632 RGD:9479074
NCBI chrNW_004955437:396,736...411,144
Ensembl chrNW_004955437:396,742...411,144
G
Ep300
E1A binding protein p300
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235
G
H3f3a
H3 histone, family 3A
ISO
RGD
PMID:24614311
RGD:9075965
NCBI chrNW_004955489:269,900...278,398
Ensembl chrNW_004955489:269,900...278,398
G
H3f3b
H3 histone, family 3B
ISO
RGD
PMID:24614311
RGD:9075965
NCBI chrNW_004955506:6,475,336...6,478,781
Ensembl chrNW_004955506:6,474,727...6,482,244
G
Hat1
histone acetyltransferase 1
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955449:3,026,194...3,070,448
Ensembl chrNW_004955449:3,025,461...3,066,919
G
Hcfc1
host cell factor C1
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955580:616,477...636,849
Ensembl chrNW_004955580:616,477...635,597
G
Hdac1
histone deacetylase 1
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
G
Hdac10
histone deacetylase 10
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955413:33,272,600...33,277,893
Ensembl chrNW_004955413:33,272,714...33,277,686
G
Hdac11
histone deacetylase 11
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955429:12,890,939...12,907,749
Ensembl chrNW_004955429:12,890,879...12,907,749
G
Hdac2
histone deacetylase 2
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
G
Hdac3
histone deacetylase 3
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234
G
Hdac4
histone deacetylase 4
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955542:1,629,691...1,886,160
Ensembl chrNW_004955542:1,629,691...1,886,210
G
Hdac5
histone deacetylase 5
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955451:17,223,217...17,246,451
Ensembl chrNW_004955451:17,223,287...17,244,051
G
Hdac6
histone deacetylase 6
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
G
Hdac7
histone deacetylase 7
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955500:6,692,656...6,707,453
Ensembl chrNW_004955500:6,693,668...6,709,864
G
Hdac8
histone deacetylase 8
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955475:11,748,502...12,012,884
Ensembl chrNW_004955475:11,748,365...12,013,241
G
Hdac9
histone deacetylase 9
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955410:21,046,312...21,932,029
Ensembl chrNW_004955410:21,245,562...21,932,023
G
Hjurp
Holliday junction recognition protein
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955453:2,323,018...2,335,090
Ensembl chrNW_004955453:2,322,446...2,334,588
G
Ing2
inhibitor of growth family member 2
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955403:25,325,600...25,331,175
Ensembl chrNW_004955403:25,325,600...25,331,175
G
Jmjd1c
jumonji domain containing 1C
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955425:16,343,314...16,552,552
Ensembl chrNW_004955425:16,344,141...16,493,527
G
Kat2a
lysine acetyltransferase 2A
ISO
RGD
PMID:21151613 PMID:23642229
RGD:9104959 RGD:9479074
NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
G
Kat2b
lysine acetyltransferase 2B
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
G
Kat5
lysine acetyltransferase 5
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
G
Kat6a
lysine acetyltransferase 6A
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955536:900,198...1,015,520
Ensembl chrNW_004955536:900,198...1,015,520
G
Kat7
lysine acetyltransferase 7
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955451:11,770,201...11,802,992
Ensembl chrNW_004955451:11,770,201...11,802,992
G
Kdm1a
lysine demethylase 1A
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955452:3,044,042...3,104,650
Ensembl chrNW_004955452:3,044,264...3,104,418
G
Kdm1b
lysine demethylase 1B
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955483:8,000,862...8,052,486
Ensembl chrNW_004955483:8,002,577...8,052,486
G
Kdm2a
lysine demethylase 2A
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
G
Kdm2b
lysine demethylase 2B
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955482:6,774,021...6,885,113
Ensembl chrNW_004955482:6,774,059...6,887,171
G
Kdm3a
lysine demethylase 3A
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955424:1,164,384...1,218,607
Ensembl chrNW_004955424:1,171,827...1,218,607
G
Kdm3b
lysine demethylase 3B
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955418:2,026,254...2,098,223
Ensembl chrNW_004955418:2,026,254...2,098,223
G
Kdm4a
lysine demethylase 4A
ISO
RGD
PMID:23200123 PMID:23642229 PMID:24035451
RGD:7242632 RGD:9479074 RGD:9479148
NCBI chrNW_004955537:3,199,394...3,255,945
Ensembl chrNW_004955537:3,199,394...3,255,945
G
Kdm4b
lysine demethylase 4B
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955495:4,019,066...4,101,577
Ensembl chrNW_004955495:4,018,770...4,114,604
G
Kdm4c
lysine demethylase 4C
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955434:10,646,524...11,000,589
Ensembl chrNW_004955434:10,685,704...11,000,644
G
Kdm4d
lysine demethylase 4D
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955605:7,585...32,650
Ensembl chrNW_004955605:8,977...10,539
G
Kdm5a
lysine demethylase 5A
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955454:6,774,308...6,865,047
Ensembl chrNW_004955454:6,774,476...6,865,033
G
Kdm5b
lysine demethylase 5B
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955406:38,755,220...38,823,094
Ensembl chrNW_004955406:38,755,220...38,823,088
G
Kdm5c
lysine demethylase 5C
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955475:243,666...278,064
Ensembl chrNW_004955475:243,666...278,627
G
Kdm6a
lysine demethylase 6A
ISO
RGD
PMID:22663077 PMID:23200123
RGD:7242632 RGD:9479053
NCBI chrNW_004955516:3,151,350...3,346,832
Ensembl chrNW_004955516:3,149,948...3,346,832
G
Kdm6b
lysine demethylase 6B
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955467:9,085,239...9,106,658
Ensembl chrNW_004955467:9,086,204...9,094,404
G
Kdm7a
lysine demethylase 7A
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955494:3,018,395...3,110,528
Ensembl chrNW_004955494:3,030,133...3,104,215
G
Kdm8
lysine demethylase 8
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955493:5,437,344...5,462,849
Ensembl chrNW_004955493:5,437,090...5,462,294
G
Kmt2a
lysine methyltransferase 2A
ISO
RGD
PMID:22663077 PMID:23200123
RGD:7242632 RGD:9479053
NCBI chrNW_004955412:19,586,435...19,670,149
Ensembl chrNW_004955412:19,586,141...19,665,527
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Kmt2b
lysine methyltransferase 2B
ISO
RGD
PMID:22663077 PMID:23200123
RGD:7242632 RGD:9479053
NCBI chrNW_004955468:2,813,183...2,834,326
Ensembl chrNW_004955468:2,813,496...2,834,326
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Kmt2c
lysine methyltransferase 2C
ISO
RGD
PMID:22663077 PMID:23200123
RGD:7242632 RGD:9479053
NCBI chrNW_004955491:6,245,408...6,420,535
Ensembl chrNW_004955491:6,247,249...6,402,470
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Kmt2d
lysine methyltransferase 2D
ISO
RGD
PMID:22663077 PMID:23200123
RGD:7242632 RGD:9479053
NCBI chrNW_004955500:7,850,782...7,891,703
Ensembl chrNW_004955500:7,853,292...7,886,067
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Kmt2e
lysine methyltransferase 2E (inactive)
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955410:9,714,587...9,808,021
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Kmt5a
lysine methyltransferase 5A
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955482:5,488,151...5,500,764
Ensembl chrNW_004955482:5,485,649...5,501,636
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Kmt5b
lysine methyltransferase 5B
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955422:17,626,606...17,684,890
Ensembl chrNW_004955422:17,647,530...17,682,132
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Kmt5c
lysine methyltransferase 5C
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955567:895,334...901,240
Ensembl chrNW_004955567:894,608...900,578
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L3mbtl1
L3MBTL histone methyl-lysine binding protein 1
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955445:13,621,007...13,645,809
Ensembl chrNW_004955445:13,621,791...13,645,799
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Lbr
lamin B receptor
ISO
RGD
PMID:24035451
RGD:9479148
NCBI chrNW_004955520:401,733...418,279
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LOC102008188
core histone macro-H2A.1
ISO
RGD
PMID:24696452
RGD:9074213
NCBI chrNW_004955408:30,497,531...30,550,095
Ensembl chrNW_004955408:30,497,531...30,550,118
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LOC102009660
protein HIRA
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955442:18,581,370...18,673,590
Ensembl chrNW_004955442:18,581,370...18,673,761
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LOC102017503
core histone macro-H2A.2
ISO
RGD
PMID:24696452
RGD:9074213
NCBI chrNW_004955437:21,126,581...21,186,308
Ensembl chrNW_004955437:21,126,006...21,186,797
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LOC102021365
histone H2A.Z
ISO
RGD
PMID:24696452
RGD:9074213
NCBI chrNW_004955496:7,733,910...7,735,525
Ensembl chrNW_004955496:7,733,918...7,735,525
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LOC102025775
histone H2AX
ISO
RGD
PMID:24614311
RGD:9075965
NCBI chrNW_004955412:20,203,173...20,204,714
Ensembl chrNW_004955412:20,203,772...20,204,203
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Mcph1
microcephalin 1
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955403:54,143,454...54,273,201
G
Mdc1
mediator of DNA damage checkpoint 1
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955583:688,288...722,393
G
Men1
menin 1
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955422:20,356,491...20,363,374
Ensembl chrNW_004955422:20,356,491...20,363,575
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Mysm1
Myb like, SWIRM and MPN domains 1
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955464:1,185,184...1,226,709
Ensembl chrNW_004955464:1,185,174...1,220,848
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Nap1l1
nucleosome assembly protein 1 like 1
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955405:15,332,696...15,365,181
Ensembl chrNW_004955405:15,330,328...15,365,208
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Nasp
nuclear autoantigenic sperm protein
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955464:12,667,050...12,697,021
Ensembl chrNW_004955464:12,667,050...12,697,769
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Ncoa6
nuclear receptor coactivator 6
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955422:26,564,535...26,639,516
Ensembl chrNW_004955422:26,564,037...26,632,675
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Nsd1
nuclear receptor binding SET domain protein 1
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955408:29,416,393...29,547,444
Ensembl chrNW_004955408:29,413,595...29,542,768
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Nsd3
nuclear receptor binding SET domain protein 3
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955463:13,864,294...13,985,995
Ensembl chrNW_004955463:13,869,610...13,946,830
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Orc1
origin recognition complex subunit 1
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955464:6,761,046...6,787,144
Ensembl chrNW_004955464:6,764,992...6,787,066
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Pagr1
PAXIP1 associated glutamate rich protein 1
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955493:7,142,048...7,144,836
Ensembl chrNW_004955493:7,142,272...7,144,389
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Paxip1
PAX interacting protein 1
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955491:8,177,422...8,219,764
Ensembl chrNW_004955491:8,177,422...8,219,766
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Pbrm1
polybromo 1
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955430:2,536,086...2,671,094
Ensembl chrNW_004955430:2,536,086...2,670,617
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Pcgf1
polycomb group ring finger 1
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955424:11,282,562...11,284,970
Ensembl chrNW_004955424:11,282,091...11,286,753
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Pcgf2
polycomb group ring finger 2
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955451:13,817,559...13,822,342
Ensembl chrNW_004955451:13,817,559...13,832,653
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Pcgf3
polycomb group ring finger 3
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955514:307,331...350,039
Ensembl chrNW_004955514:307,332...350,039
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Pcgf5
polycomb group ring finger 5
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955425:1,913,711...1,980,800
Ensembl chrNW_004955425:1,919,228...1,979,874
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Pcgf6
polycomb group ring finger 6
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955485:7,196,626...7,228,918
Ensembl chrNW_004955485:7,196,626...7,227,536
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Phc1
polyhomeotic homolog 1
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955413:6,156,934...6,176,460
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Phc2
polyhomeotic homolog 2
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955452:11,490,336...11,538,618
Ensembl chrNW_004955452:11,491,573...11,538,618
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Phc3
polyhomeotic homolog 3
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955420:329,215...403,191
Ensembl chrNW_004955420:329,215...403,168
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Phf1
PHD finger protein 1
ISO
RGD
PMID:23642229 PMID:24035451
RGD:9479074 RGD:9479148
NCBI chrNW_004955437:1,943,049...1,947,027
Ensembl chrNW_004955437:1,943,065...1,946,705
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Phf19
PHD finger protein 19
ISO
RGD
PMID:23642229 PMID:24035451
RGD:9479074 RGD:9479148
NCBI chrNW_004955419:7,160,249...7,179,323
Ensembl chrNW_004955419:7,160,249...7,179,318
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Phf2
PHD finger protein 2
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955515:4,428,068...4,471,642
Ensembl chrNW_004955515:4,429,957...4,471,641
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Phf8
PHD finger protein 8
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955475:1,105,619...1,230,758
Ensembl chrNW_004955475:1,105,619...1,230,756
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Prdm16
PR/SET domain 16
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955486:8,139,848...8,327,788
Ensembl chrNW_004955486:8,137,531...8,327,977
G
Prdm2
PR/SET domain 2
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955527:4,005,410...4,105,376
Ensembl chrNW_004955527:4,012,332...4,105,311
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Prdm8
PR/SET domain 8
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955433:4,443,339...4,463,687
Ensembl chrNW_004955433:4,459,669...4,462,928
G
Prmt1
protein arginine methyltransferase 1
ISO
RGD
PMID:24583552
RGD:9479047
NCBI chrNW_004955559:1,205,340...1,215,672
Ensembl chrNW_004955559:1,203,283...1,215,021
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Prmt2
protein arginine methyltransferase 2
ISO
RGD
PMID:24583552
RGD:9479047
NCBI chrNW_004955407:42,991,305...43,019,332
Ensembl chrNW_004955407:42,992,469...43,018,760
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Prmt5
protein arginine methyltransferase 5
ISO
RGD
PMID:24583552
RGD:9479047
NCBI chrNW_004955409:37,369,507...37,378,034
Ensembl chrNW_004955409:37,369,234...37,378,093
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Prmt6
protein arginine methyltransferase 6
ISO
RGD
PMID:24583552
RGD:9479047
NCBI chrNW_004955435:10,816,787...10,818,047
Ensembl chrNW_004955435:10,816,831...10,817,961
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Prmt7
protein arginine methyltransferase 7
ISO
RGD
PMID:24583552
RGD:9479047
NCBI chrNW_004955484:8,299,427...8,352,465
Ensembl chrNW_004955484:8,299,427...8,340,287
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Rag2
recombination activating 2
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732
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Rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955406:40,868,290...40,904,343
Ensembl chrNW_004955406:40,867,527...40,904,349
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Ring1
ring finger protein 1
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955437:1,782,156...1,785,811
Ensembl chrNW_004955437:1,782,115...1,788,842
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Rnf2
ring finger protein 2
ISO
RGD
PMID:23473600 PMID:25065329
RGD:9479058 RGD:9479060
NCBI chrNW_004955406:23,672,947...23,725,253
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Setd1a
SET domain containing 1A, histone lysine methyltransferase
ISO
RGD
PMID:22663077 PMID:23200123
RGD:7242632 RGD:9479053
NCBI chrNW_004955493:7,808,652...7,834,886
Ensembl chrNW_004955493:7,808,652...7,834,880
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Setd1b
SET domain containing 1B, histone lysine methyltransferase
ISO
RGD
PMID:22663077 PMID:23200123
RGD:7242632 RGD:9479053
NCBI chrNW_004955482:6,598,176...6,621,944
Ensembl chrNW_004955482:6,600,262...6,621,722
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Setd2
SET domain containing 2, histone lysine methyltransferase
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955420:25,070,626...25,178,410
Ensembl chrNW_004955420:25,090,798...25,177,760
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Setd7
SET domain containing 7, histone lysine methyltransferase
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955428:4,131,431...4,178,250
Ensembl chrNW_004955428:4,131,103...4,178,250
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Setdb1
SET domain bifurcated histone lysine methyltransferase 1
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955588:290,497...338,438
Ensembl chrNW_004955588:290,168...338,426
G
Sgf29
SAGA complex associated factor 29
ISO
RGD
PMID:23642229 PMID:24035451
RGD:9479074 RGD:9479148
NCBI chrNW_004955493:6,759,426...6,774,796
Ensembl chrNW_004955493:6,759,426...6,774,796
G
Sirt1
sirtuin 1
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
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Sirt2
sirtuin 2
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
G
Sirt3
sirtuin 3
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955476:11,794,951...11,826,244
Ensembl chrNW_004955476:11,794,951...11,826,237
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Sirt4
sirtuin 4
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955455:11,322,812...11,334,786
Ensembl chrNW_004955455:11,324,479...11,334,817
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Sirt5
sirtuin 5
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955465:1,129,217...1,167,604
Ensembl chrNW_004955465:1,129,217...1,167,604
G
Sirt6
sirtuin 6
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
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Sirt7
sirtuin 7
ISO
RGD
PMID:21151613
RGD:9104959
NCBI chrNW_004955506:1,252,271...1,258,728
Ensembl chrNW_004955506:1,252,274...1,258,728
G
Smarca2
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955434:6,420,850...6,592,797
Ensembl chrNW_004955434:6,420,854...6,594,425
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
ISO
RGD
PMID:24686119
RGD:9479075
NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
G
Smyd1
SET and MYND domain containing 1
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955424:769,287...800,646
Ensembl chrNW_004955424:769,287...800,885
G
Smyd2
SET and MYND domain containing 2
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955406:3,467,123...3,509,156
Ensembl chrNW_004955406:3,465,924...3,509,156
G
Smyd3
SET and MYND domain containing 3
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955406:8,768,365...9,417,612
Ensembl chrNW_004955406:8,768,588...9,417,525
G
Spin1
spindlin 1
ISO
RGD
PMID:24035451
RGD:9479148
NCBI chrNW_004955515:3,470,956...3,518,909
Ensembl chrNW_004955515:3,470,956...3,513,728
G
Ssrp1
structure specific recognition protein 1
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955511:2,378,720...2,388,201
Ensembl chrNW_004955511:2,378,652...2,388,198
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Supt16h
SPT16 homolog, facilitates chromatin remodeling subunit
ISO
RGD
PMID:23288364
RGD:9068945
NCBI chrNW_004955550:2,074,646...2,114,634
Ensembl chrNW_004955550:2,074,941...2,114,528
G
Suv39h1
SUV39H1 histone lysine methyltransferase
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955543:258,479...271,128
Ensembl chrNW_004955543:258,479...272,473
G
Suv39h2
SUV39H2 histone lysine methyltransferase
ISO
RGD
PMID:23200123
RGD:7242632
NCBI chrNW_004955429:19,503,197...19,526,454
Ensembl chrNW_004955429:19,503,197...19,528,027
G
Taf1
TATA-box binding protein associated factor 1
ISO
RGD
PMID:23642229 PMID:24686119
RGD:9479074 RGD:9479075
NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724
G
Tdrd3
tudor domain containing 3
ISO
RGD
PMID:23211769 PMID:24035451
RGD:9479148 RGD:9479163
NCBI chrNW_004955404:44,329,159...44,457,958
Ensembl chrNW_004955404:44,328,795...44,457,784
G
Tp53bp1
tumor protein p53 binding protein 1
ISO
RGD
PMID:23642229 PMID:24035451
RGD:9479074 RGD:9479148
NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278
G
Trim24
tripartite motif containing 24
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955494:4,308,924...4,421,588
Ensembl chrNW_004955494:4,308,924...4,370,160
G
Trim33
tripartite motif containing 33
ISO
RGD
PMID:23642229 PMID:24686119
RGD:9479074 RGD:9479075
NCBI chrNW_004955435:17,631,596...17,750,261
Ensembl chrNW_004955435:17,631,602...17,750,261
G
Uhrf1
ubiquitin like with PHD and ring finger domains 1
ISO
RGD
PMID:23642229 PMID:24035451
RGD:9479074 RGD:9479148
NCBI chrNW_004955495:4,153,898...4,154,611
G
Usp12
ubiquitin specific peptidase 12
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955497:6,524,487...6,613,403
Ensembl chrNW_004955497:6,524,487...6,556,675
G
Usp16
ubiquitin specific peptidase 16
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955407:28,375,246...28,413,279
G
Usp21
ubiquitin specific peptidase 21
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955468:12,923,121...12,929,780
Ensembl chrNW_004955468:12,924,574...12,929,497
G
Usp22
ubiquitin specific peptidase 22
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955577:979,317...1,002,478
Ensembl chrNW_004955577:978,152...1,002,480
G
Usp3
ubiquitin specific peptidase 3
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955450:11,729,433...11,802,462
Ensembl chrNW_004955450:11,727,104...11,802,462
G
Usp44
ubiquitin specific peptidase 44
ISO
RGD
PMID:24647359
RGD:9479061
NCBI chrNW_004955405:31,977,045...32,006,733
Ensembl chrNW_004955405:31,977,602...32,006,810
G
Wdr5
WD repeat domain 5
ISO
RGD
PMID:22663077 PMID:23642229
RGD:9479053 RGD:9479074
NCBI chrNW_004955513:3,198,655...3,213,754
Ensembl chrNW_004955513:3,198,980...3,216,468
G
Wdr82
WD repeat domain 82
ISO
RGD
PMID:22663077
RGD:9479053
NCBI chrNW_004955532:3,860,785...3,880,714
Ensembl chrNW_004955532:3,863,492...3,880,713
G
Ywhaz
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta
ISO
RGD
PMID:23642229
RGD:9479074
NCBI chrNW_004955417:16,047,263...16,070,506
Ensembl chrNW_004955417:16,047,263...16,072,854
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Blm
BLM RecQ like helicase
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687
G
Brca1
BRCA1 DNA repair associated
ISO
RGD
PMID:16498454 PMID:24326623
RGD:1578504 RGD:8661237
NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
G
Brca2
BRCA2 DNA repair associated
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432
G
Dna2
DNA replication helicase/nuclease 2
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955425:20,664,412...20,705,070
Ensembl chrNW_004955425:20,661,727...20,702,754
G
Exo1
exonuclease 1
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955406:10,248,981...10,276,207
Ensembl chrNW_004955406:10,245,886...10,275,522
G
Nbn
nibrin
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
G
Rad50
RAD50 double strand break repair protein
ISO
RGD
PMID:16498454 PMID:20690856
RGD:1578504 RGD:8662366
NCBI chrNW_004955408:3,953,801...4,035,494
Ensembl chrNW_004955408:3,953,800...4,035,494
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Rad51
RAD51 recombinase
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
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Rad51b
RAD51 paralog B
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955466:1,686,472...2,388,146
Ensembl chrNW_004955466:2,137,192...2,381,450
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Rad51c
RAD51 paralog C
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955451:4,053,195...4,178,226
Ensembl chrNW_004955451:4,145,226...4,178,487
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Rad51d
RAD51 paralog D
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955481:9,795,102...9,810,426
Ensembl chrNW_004955481:9,795,102...9,810,426
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Rad54b
RAD54 homolog B
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955417:10,598,295...10,685,999
Ensembl chrNW_004955417:10,597,450...10,686,005
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Rbbp8
RB binding protein 8, endonuclease
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955402:11,245,857...11,331,872
Ensembl chrNW_004955402:11,245,819...11,335,367
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Xrcc2
X-ray repair cross complementing 2
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955491:6,579,443...6,629,410
Ensembl chrNW_004955491:6,599,085...6,629,439
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Xrcc3
X-ray repair cross complementing 3
ISO
RGD
PMID:20690856
RGD:8662366
NCBI chrNW_004955538:2,499,297...2,511,898
Ensembl chrNW_004955538:2,501,607...2,509,778
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Actb
actin beta
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585
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Actl6a
actin like 6A
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955420:8,745,390...8,764,993
Ensembl chrNW_004955420:8,744,597...8,764,993
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Actr5
actin related protein 5
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955445:17,991,969...18,024,525
Ensembl chrNW_004955445:17,991,969...18,024,818
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Actr6
actin related protein 6
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955405:35,942,690...35,962,422
Ensembl chrNW_004955405:35,942,690...35,962,422
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Actr8
actin related protein 8
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955430:3,851,758...3,867,291
Ensembl chrNW_004955430:3,851,758...3,867,291
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Brd8
bromodomain containing 8
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955418:2,232,853...2,275,812
Ensembl chrNW_004955418:2,232,842...2,275,875
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Dmap1
DNA methyltransferase 1 associated protein 1
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955464:13,984,748...13,993,411
Ensembl chrNW_004955464:13,982,713...13,993,410
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Ep400
E1A binding protein p400
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955482:639,316...746,331
Ensembl chrNW_004955482:641,214...746,331
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Epc1
enhancer of polycomb homolog 1
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955429:23,819,261...23,910,279
Ensembl chrNW_004955429:23,817,254...23,909,946
G
Epc2
enhancer of polycomb homolog 2
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955440:14,573,960...14,645,171
Ensembl chrNW_004955440:14,573,960...14,646,431
G
Ing3
inhibitor of growth family member 3
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955479:2,741,554...2,771,524
Ensembl chrNW_004955479:2,743,655...2,774,247
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Ino80
INO80 complex ATPase subunit
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955416:7,870,521...8,020,862
Ensembl chrNW_004955416:7,870,258...7,961,812
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Ino80b
INO80 complex subunit B
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955424:11,324,741...11,327,466
Ensembl chrNW_004955424:11,324,308...11,327,170
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Ino80c
INO80 complex subunit C
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955402:22,189,943...22,210,315
Ensembl chrNW_004955402:22,189,943...22,210,658
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Ino80d
INO80 complex subunit D
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955457:8,913,625...8,983,859
Ensembl chrNW_004955457:8,924,615...8,973,274
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Ino80e
INO80 complex subunit E
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955493:6,953,945...6,963,910
Ensembl chrNW_004955493:6,949,534...6,964,366
G
Kat5
lysine acetyltransferase 5
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
G
Mcrs1
microspherule protein 1
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955547:180,783...189,980
Ensembl chrNW_004955547:178,301...189,980
G
Meaf6
MYST/Esa1 associated factor 6
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955452:15,325,227...15,347,175
Ensembl chrNW_004955452:15,325,227...15,347,175
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Morf4l1
mortality factor 4 like 1
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955533:14,770...28,290
Ensembl chrNW_004955533:14,730...27,643
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Morf4l2
mortality factor 4 like 2
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955548:682,409...685,886
Ensembl chrNW_004955548:682,409...685,900
G
Mrgbp
MRG domain binding protein
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955528:1,320,061...1,324,094
G
Nfrkb
nuclear factor related to kappaB binding protein
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955412:30,817,151...30,848,992
Ensembl chrNW_004955412:30,813,769...30,849,001
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Ruvbl1
RuvB like AAA ATPase 1
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955429:15,598,465...15,632,290
Ensembl chrNW_004955429:15,598,465...15,633,713
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Ruvbl2
RuvB like AAA ATPase 2
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955559:1,657,241...1,674,272
Ensembl chrNW_004955559:1,654,059...1,674,272
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Srcap
Snf2 related CREBBP activator protein
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955493:7,554,724...7,602,560
Ensembl chrNW_004955493:7,559,723...7,602,535
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Tfpt
TCF3 fusion partner
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955604:136,357...139,799
Ensembl chrNW_004955604:136,427...139,761
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Trrap
transformation/transcription domain associated protein
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955460:14,641,891...14,761,641
Ensembl chrNW_004955460:14,644,133...14,760,787
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Uchl5
ubiquitin C-terminal hydrolase L5
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955406:30,432,652...30,468,741
G
Vps72
vacuolar protein sorting 72 homolog
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955588:537,122...550,564
Ensembl chrNW_004955588:536,788...551,241
G
Yeats4
YEATS domain containing 4
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955405:9,677,701...9,706,541
G
Yy1
YY1 transcription factor
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955438:21,341,374...21,377,674
G
Znhit1
zinc finger HIT-type containing 1
ISO
RGD
PMID:21502417
RGD:9495926
NCBI chrNW_004955456:16,070,622...16,082,286
Ensembl chrNW_004955456:16,070,622...16,082,286
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Baz1a
bromodomain adjacent to zinc finger domain 1A
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955409:26,136,961...26,231,960
Ensembl chrNW_004955409:26,149,665...26,231,180
G
Baz1b
bromodomain adjacent to zinc finger domain 1B
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955456:14,185,091...14,242,391
Ensembl chrNW_004955456:14,185,107...14,240,688
G
Bptf
bromodomain PHD finger transcription factor
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955478:6,990,816...7,088,751
Ensembl chrNW_004955478:6,990,833...7,086,721
G
Chrac1
chromatin accessibility complex subunit 1
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955461:14,184,318...14,189,645
Ensembl chrNW_004955461:14,185,737...14,189,645
G
Pole3
DNA polymerase epsilon 3, accessory subunit
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955419:14,086,940...14,089,906
Ensembl chrNW_004955419:14,086,940...14,089,330
G
Rbbp4
RB binding protein 4, chromatin remodeling factor
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955452:10,955,399...10,975,036
Ensembl chrNW_004955452:10,955,399...10,975,036
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Rbbp7
RB binding protein 7, chromatin remodeling factor
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955519:1,460,199...1,482,699
G
Smarca1
SNF2 related chromatin remodeling ATPase 1
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955473:5,498,738...5,572,863
Ensembl chrNW_004955473:5,498,674...5,573,169
G
Smarca5
SNF2 related chromatin remodeling ATPase 5
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955471:12,206,462...12,240,219
Ensembl chrNW_004955471:12,203,318...12,237,333
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Exo1
exonuclease 1
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955406:10,248,981...10,276,207
Ensembl chrNW_004955406:10,245,886...10,275,522
G
Hmgb1
high mobility group box 1
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339
G
Lig1
DNA ligase 1
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955609:118,442...160,009
Ensembl chrNW_004955609:126,278...160,063
G
Mlh1
mutL homolog 1
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
G
Mlh3
mutL homolog 3
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955523:515,409...547,257
Ensembl chrNW_004955523:518,565...546,410
G
Msh2
mutS homolog 2
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
G
Msh3
mutS homolog 3
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955418:29,149,595...29,274,067
Ensembl chrNW_004955418:29,150,085...29,274,437
G
Msh6
mutS homolog 6
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955441:14,451,207...14,471,316
Ensembl chrNW_004955441:14,451,307...14,471,227
G
Pcna
proliferating cell nuclear antigen
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673
G
Pms1
PMS1 homolog 1, mismatch repair system component
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955403:9,021,488...9,100,442
Ensembl chrNW_004955403:9,022,078...9,100,442
G
Pms2
PMS1 homolog 2, mismatch repair system component
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955460:13,762,854...13,791,462
G
Pold1
DNA polymerase delta 1, catalytic subunit
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955559:712,375...730,551
Ensembl chrNW_004955559:712,321...725,661
G
Pold2
DNA polymerase delta 2, accessory subunit
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955456:7,853,476...7,860,108
Ensembl chrNW_004955456:7,853,476...7,860,108
G
Pold3
DNA polymerase delta 3, accessory subunit
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955414:17,064,379...17,111,946
G
Pold4
DNA polymerase delta 4, accessory subunit
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955422:18,116,604...18,118,280
Ensembl chrNW_004955422:18,116,610...18,118,280
G
Rfc1
replication factor C subunit 1
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955443:7,969,117...8,051,734
Ensembl chrNW_004955443:7,983,840...8,051,089
G
Rfc2
replication factor C subunit 2
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955456:13,659,122...13,671,405
Ensembl chrNW_004955456:13,659,157...13,671,181
G
Rfc3
replication factor C subunit 3
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955431:12,071,465...12,084,570
Ensembl chrNW_004955431:12,069,204...12,084,577
G
Rfc4
replication factor C subunit 4
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955420:20,948,549...20,967,845
Ensembl chrNW_004955420:20,948,549...20,967,845
G
Rfc5
replication factor C subunit 5
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955455:13,325,912...13,337,241
Ensembl chrNW_004955455:13,326,271...13,338,050
G
Rpa1
replication protein A1
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955481:1,304,035...1,361,806
G
Rpa2
replication protein A2
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955452:7,080,641...7,098,009
Ensembl chrNW_004955452:7,080,579...7,097,742
G
Rpa3
replication protein A3
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955432:14,723,933...14,727,356
Ensembl chrNW_004955432:14,723,751...14,727,290
G
Rpa4
replication protein A4
ISO
RGD
PMID:18157157
RGD:2306716
NCBI chrNW_004955503:2,514,460...2,516,973
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Aplf
aprataxin and PNKP like factor
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955424:16,338,546...16,449,074
Ensembl chrNW_004955424:16,336,228...16,448,766
G
Aptx
aprataxin
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955472:2,645,716...2,664,394
Ensembl chrNW_004955472:2,652,869...2,664,272
G
Dclre1c
DNA cross-link repair 1C
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955429:19,461,446...19,501,908
Ensembl chrNW_004955429:19,461,528...19,505,321
G
Dntt
DNA nucleotidylexotransferase
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955507:2,494,074...2,551,326
Ensembl chrNW_004955507:2,493,718...2,551,336
G
Lig4
DNA ligase 4
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193
G
Nhej1
non-homologous end joining factor 1
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955453:14,278,773...14,362,167
Ensembl chrNW_004955453:14,281,069...14,363,876
G
Pnkp
polynucleotide kinase 3'-phosphatase
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955559:1,064,924...1,070,120
G
Poll
DNA polymerase lambda
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955485:8,691,886...8,700,681
Ensembl chrNW_004955485:8,691,453...8,703,872
G
Polm
DNA polymerase mu
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955456:7,886,182...7,893,800
Ensembl chrNW_004955456:7,886,291...7,895,085
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
G
Rbbp8
RB binding protein 8, endonuclease
ISO
RGD
PMID:19633668
RGD:401940172
NCBI chrNW_004955402:11,245,857...11,331,872
Ensembl chrNW_004955402:11,245,819...11,335,367
G
Rif1
replication timing regulatory factor 1
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748
G
Tp53bp1
tumor protein p53 binding protein 1
ISO
RGD
PMID:24326623
RGD:8661237
NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278
G
Xrcc4
X-ray repair cross complementing 4
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264
G
Xrcc5
X-ray repair cross complementing 5
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955453:16,967,453...17,054,634
Ensembl chrNW_004955453:16,967,453...17,054,634
G
Xrcc6
X-ray repair cross complementing 6
ISO
RGD
PMID:20192759
RGD:8662352
NCBI chrNW_004955413:27,135,785...27,158,344
Ensembl chrNW_004955413:27,135,805...27,159,750
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Cetn2
centrin 2
ISO
RGD
PMID:22572993
RGD:7246920
NCBI chrNW_004955498:8,131,356...8,135,751
Ensembl chrNW_004955498:8,131,295...8,135,751
G
Ddb1
damage specific DNA binding protein 1
ISO
RGD
PMID:22572993
RGD:7246920
NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
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Ddb2
damage specific DNA binding protein 2
ISO
RGD
PMID:22572993
RGD:7246920
NCBI chrNW_004955422:961,602...977,066
Ensembl chrNW_004955422:961,893...974,338
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Ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit
ISO
RGD
PMID:19154342
RGD:7246926
NCBI chrNW_004955555:2,393,510...2,430,180
Ensembl chrNW_004955555:2,393,278...2,406,582
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Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
ISO
SMPDB RGD
PMID:22572993
RGD:7246920 SMP:00478
NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599
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Ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit
ISO
RGD
PMID:22572993
RGD:7246920
NCBI chrNW_004955459:3,210,936...3,238,401
Ensembl chrNW_004955459:3,210,479...3,242,576
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Ercc4
ERCC excision repair 4, endonuclease catalytic subunit
ISO
SMPDB RGD
PMID:19154342
RGD:7246926 SMP:00478
NCBI chrNW_004955442:4,833,453...4,861,201
Ensembl chrNW_004955442:4,831,721...4,861,122
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Ercc5
ERCC excision repair 5, endonuclease
ISO
SMPDB RGD
PMID:19154342
RGD:7246926 SMP:00478
NCBI chrNW_004955404:8,294,506...8,321,505
Ensembl chrNW_004955404:8,294,346...8,321,112
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Ercc6
ERCC excision repair 6, chromatin remodeling factor
ISO
RGD
PMID:18166977 PMID:22824526
RGD:7246919 RGD:7246923
NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
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Gtf2h1
general transcription factor IIH subunit 1
ISO
RGD
PMID:22572993
RGD:7246920
NCBI chrNW_004955414:33,028,701...33,063,233
Ensembl chrNW_004955414:33,028,701...33,063,233
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Hmgn1
high mobility group nucleosome binding domain 1
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955407:38,136,386...38,142,587
Ensembl chrNW_004955407:38,136,386...38,143,479
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Lig1
DNA ligase 1
ISO
SMPDB RGD
PMID:21601536
RGD:7246935 SMP:00478
NCBI chrNW_004955609:118,442...160,009
Ensembl chrNW_004955609:126,278...160,063
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Lig3
DNA ligase 3
ISO
RGD
PMID:21601536
RGD:7246935
NCBI chrNW_004955481:9,696,050...9,716,154
Ensembl chrNW_004955481:9,696,054...9,715,637
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Pcna
proliferating cell nuclear antigen
ISO
SMPDB RGD
PMID:17512402 PMID:23545418
RGD:7246931 RGD:7246932 SMP:00478
NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673
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Pold1
DNA polymerase delta 1, catalytic subunit
ISO
RGD
PMID:21601536
RGD:7246935
NCBI chrNW_004955559:712,375...730,551
Ensembl chrNW_004955559:712,321...725,661
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Pold2
DNA polymerase delta 2, accessory subunit
ISO
RGD
PMID:21601536
RGD:7246935
NCBI chrNW_004955456:7,853,476...7,860,108
Ensembl chrNW_004955456:7,853,476...7,860,108
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Pold3
DNA polymerase delta 3, accessory subunit
ISO
RGD
PMID:21601536
RGD:7246935
NCBI chrNW_004955414:17,064,379...17,111,946
G
Pold4
DNA polymerase delta 4, accessory subunit
ISO
RGD
PMID:21601536
RGD:7246935
NCBI chrNW_004955422:18,116,604...18,118,280
Ensembl chrNW_004955422:18,116,610...18,118,280
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Pole
DNA polymerase epsilon, catalytic subunit
ISO
SMPDB RGD
PMID:12806123 PMID:21601536
RGD:7246935 RGD:7246936 SMP:00478
NCBI chrNW_004955482:373,467...418,000
Ensembl chrNW_004955482:373,555...417,266
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Pole2
DNA polymerase epsilon 2, accessory subunit
ISO
RGD
PMID:12806123
RGD:7246936
NCBI chrNW_004955409:12,983,488...13,014,669
Ensembl chrNW_004955409:12,983,586...13,014,578
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Pole3
DNA polymerase epsilon 3, accessory subunit
ISO
RGD
PMID:12806123
RGD:7246936
NCBI chrNW_004955419:14,086,940...14,089,906
Ensembl chrNW_004955419:14,086,940...14,089,330
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Pole4
DNA polymerase epsilon 4, accessory subunit
ISO
RGD
PMID:12806123
RGD:7246936
NCBI chrNW_004955424:10,839,639...10,844,985
Ensembl chrNW_004955424:10,839,639...10,844,985
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Polk
DNA polymerase kappa
ISO
RGD
PMID:21601536
RGD:7246935
NCBI chrNW_004955425:25,164,749...25,228,064
Ensembl chrNW_004955425:25,161,222...25,228,524
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Polr1a
RNA polymerase I subunit A
ISO
SMPDB
SMP:00478
NCBI chrNW_004955424:1,507,935...1,595,068
Ensembl chrNW_004955424:1,508,037...1,593,108
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Rad23a
RAD23 homolog A, nucleotide excision repair protein
ISO
SMPDB
SMP:00478
NCBI chrNW_004955415:31,991,478...31,997,277
Ensembl chrNW_004955415:31,991,479...32,000,250
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Rad23b
RAD23 homolog B, nucleotide excision repair protein
ISO
RGD
PMID:22572993
RGD:7246920
NCBI chrNW_004955419:19,428,415...19,473,181
Ensembl chrNW_004955419:19,429,970...19,460,796
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Rfc1
replication factor C subunit 1
ISO
SMPDB RGD
PMID:23545418
RGD:7246932 SMP:00478
NCBI chrNW_004955443:7,969,117...8,051,734
Ensembl chrNW_004955443:7,983,840...8,051,089
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Rfc2
replication factor C subunit 2
ISO
RGD
PMID:23545418
RGD:7246932
NCBI chrNW_004955456:13,659,122...13,671,405
Ensembl chrNW_004955456:13,659,157...13,671,181
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Rfc3
replication factor C subunit 3
ISO
RGD
PMID:23545418
RGD:7246932
NCBI chrNW_004955431:12,071,465...12,084,570
Ensembl chrNW_004955431:12,069,204...12,084,577
G
Rfc4
replication factor C subunit 4
ISO
RGD
PMID:23545418
RGD:7246932
NCBI chrNW_004955420:20,948,549...20,967,845
Ensembl chrNW_004955420:20,948,549...20,967,845
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Rfc5
replication factor C subunit 5
ISO
RGD
PMID:23545418
RGD:7246932
NCBI chrNW_004955455:13,325,912...13,337,241
Ensembl chrNW_004955455:13,326,271...13,338,050
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Rpa1
replication protein A1
ISO
RGD
PMID:19154342
RGD:7246926
NCBI chrNW_004955481:1,304,035...1,361,806
G
Rpa2
replication protein A2
ISO
RGD
PMID:19154342
RGD:7246926
NCBI chrNW_004955452:7,080,641...7,098,009
Ensembl chrNW_004955452:7,080,579...7,097,742
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Rpa3
replication protein A3
ISO
RGD
PMID:19154342
RGD:7246926
NCBI chrNW_004955432:14,723,933...14,727,356
Ensembl chrNW_004955432:14,723,751...14,727,290
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Rpa4
replication protein A4
ISO
RGD
PMID:19154342
RGD:7246926
NCBI chrNW_004955503:2,514,460...2,516,973
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Tent4a
terminal nucleotidyltransferase 4A
ISO
SMPDB
SMP:00478
NCBI chrNW_004955504:4,443,051...4,476,373
Ensembl chrNW_004955504:4,443,051...4,476,520
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Xab2
XPA binding protein 2
ISO
RGD
PMID:22824526
RGD:7246919
NCBI chrNW_004955563:1,630,403...1,638,333
Ensembl chrNW_004955563:1,630,403...1,641,037
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Xpa
XPA, DNA damage recognition and repair factor
ISO
SMPDB RGD
PMID:19154342
RGD:7246926 SMP:00478
NCBI chrNW_004955419:27,751,042...27,774,917
Ensembl chrNW_004955419:27,751,043...27,774,917
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Xpc
XPC complex subunit, DNA damage recognition and repair factor
ISO
RGD
PMID:21763452 PMID:22572993
RGD:7246920 RGD:7246922
NCBI chrNW_004955429:16,935,901...16,968,285
Ensembl chrNW_004955429:16,935,901...16,955,845
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Xrcc1
X-ray repair cross complementing 1
ISO
RGD
PMID:21601536
RGD:7246935
NCBI chrNW_004955555:1,293,416...1,315,839
Ensembl chrNW_004955555:1,293,416...1,315,839
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Actb
actin beta
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585
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Actl6a
actin like 6A
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955420:8,745,390...8,764,993
Ensembl chrNW_004955420:8,744,597...8,764,993
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Actl6b
actin like 6B
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955573:259,133...272,043
Ensembl chrNW_004955573:259,117...272,118
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Arid1a
AT-rich interaction domain 1A
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955452:6,068,631...6,120,759
Ensembl chrNW_004955452:6,068,631...6,120,759
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Arid1b
AT-rich interaction domain 1B
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955439:5,041,111...5,454,692
Ensembl chrNW_004955439:5,043,967...5,412,741
G
Arid2
AT-rich interaction domain 2
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955500:4,998,555...5,177,180
Ensembl chrNW_004955500:4,998,555...5,175,776
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Brd7
bromodomain containing 7
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955433:8,425,976...8,462,431
Ensembl chrNW_004955433:8,424,949...8,461,802
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Brd9
bromodomain containing 9
ISO
RGD
PMID:21358755
RGD:9495920
NCBI chrNW_004955504:416,145...434,132
Ensembl chrNW_004955504:415,904...434,142
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Dpf1
double PHD fingers 1
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955468:1,195,152...1,209,774
Ensembl chrNW_004955468:1,195,146...1,211,311
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Dpf2
double PHD fingers 2
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955422:19,894,502...19,910,989
Ensembl chrNW_004955422:19,892,189...19,910,989
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Dpf3
double PHD fingers 3
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955523:2,423,035...2,718,930
Ensembl chrNW_004955523:2,454,908...2,709,262
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Pbrm1
polybromo 1
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955430:2,536,086...2,671,094
Ensembl chrNW_004955430:2,536,086...2,670,617
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Phf10
PHD finger protein 10
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955411:3,911,966...3,926,995
Ensembl chrNW_004955411:3,911,791...3,930,912
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Smarca2
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955434:6,420,850...6,592,797
Ensembl chrNW_004955434:6,420,854...6,594,425
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Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
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Smarcb1
SWI/SNF related BAF chromatin remodeling complex subunit B1
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955455:8,420,263...8,457,105
Ensembl chrNW_004955455:8,415,839...8,457,097
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Smarcc1
SWI/SNF related BAF chromatin remodeling complex subunit C1
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955420:24,594,057...24,729,108
Ensembl chrNW_004955420:24,593,830...24,729,108
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Smarcc2
SWI/SNF related BAF chromatin remodeling complex subunit C2
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955458:3,764,823...3,787,159
Ensembl chrNW_004955458:3,764,823...3,787,901
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Smarcd1
SWI/SNF related BAF chromatin remodeling complex subunit D1
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955547:659,919...673,637
Ensembl chrNW_004955547:659,984...674,705
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Smarcd2
SWI/SNF related BAF chromatin remodeling complex subunit D2
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955478:7,984,736...7,996,843
Ensembl chrNW_004955478:7,985,021...7,996,843
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Smarcd3
SWI/SNF related BAF chromatin remodeling complex subunit D3
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955491:5,653,284...5,657,546
Ensembl chrNW_004955491:5,651,597...5,657,554
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Smarce1
SWI/SNF related BAF chromatin remodeling complex subunit E1
ISO
RGD
PMID:21358755 PMID:23355908
RGD:8694154 RGD:9495920
NCBI chrNW_004955451:15,129,619...15,147,487
Ensembl chrNW_004955451:15,129,132...15,147,488
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all