Ppp2ca (protein phosphatase 2 catalytic subunit alpha) - Rat Genome Database

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Gene: Ppp2ca (protein phosphatase 2 catalytic subunit alpha) Chinchilla lanigera
Analyze
Symbol: Ppp2ca
Name: protein phosphatase 2 catalytic subunit alpha
RGD ID: 8782177
Description: ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); enzyme binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to calcium ion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH asthma (ortholog); congestive heart failure (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN chromosome, centromeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554085,433,268 - 5,460,361 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554085,435,117 - 5,460,361 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References


Genomics

Comparative Map Data
Ppp2ca
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554085,433,268 - 5,460,361 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554085,435,117 - 5,460,361 (-)NCBIChiLan1.0ChiLan1.0
PPP2CA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5134,194,332 - 134,226,073 (-)EnsemblGRCh38hg38GRCh38
GRCh385134,194,332 - 134,226,073 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh375133,530,023 - 133,561,764 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365133,560,047 - 133,589,849 (-)NCBINCBI36hg18NCBI36
Build 345133,560,046 - 133,589,849NCBI
Celera5129,655,849 - 129,685,663 (-)NCBI
Cytogenetic Map5q31.1NCBI
HuRef5128,717,117 - 128,746,747 (-)NCBIHuRef
CHM1_15132,964,711 - 132,994,524 (-)NCBICHM1_1
Ppp2ca
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391151,989,651 - 52,013,576 (+)NCBIGRCm39mm39
GRCm39 Ensembl1151,989,508 - 52,018,605 (+)Ensembl
GRCm381152,098,824 - 52,122,749 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1152,098,681 - 52,127,778 (+)EnsemblGRCm38mm10GRCm38
MGSCv371151,912,326 - 51,936,251 (+)NCBIGRCm37mm9NCBIm37
MGSCv361151,942,247 - 51,966,172 (+)NCBImm8
Celera1156,667,217 - 56,691,076 (+)NCBICelera
Cytogenetic Map11B1.3NCBI
Ppp2ca
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21036,358,110 - 36,377,864 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1036,358,101 - 36,377,862 (+)Ensembl
Rnor_6.01037,534,449 - 37,554,861 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1037,535,871 - 37,554,664 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01037,324,233 - 37,343,985 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41037,621,256 - 37,641,008 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11037,627,685 - 37,647,436 (+)NCBI
Celera1035,713,154 - 35,732,937 (+)NCBICelera
Cytogenetic Map10q22NCBI
PPP2CA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15135,751,964 - 135,761,395 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5135,751,958 - 135,765,786 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05129,599,606 - 129,629,312 (-)NCBIMhudiblu_PPA_v0panPan3
PPP2CA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11122,388,327 - 22,410,052 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1122,385,257 - 22,410,052 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1121,134,537 - 21,156,029 (-)NCBI
ROS_Cfam_1.01123,189,481 - 23,211,243 (-)NCBI
UMICH_Zoey_3.11121,889,485 - 21,911,229 (-)NCBI
UNSW_CanFamBas_1.01121,754,643 - 21,776,444 (-)NCBI
UU_Cfam_GSD_1.01122,397,162 - 22,418,841 (-)NCBI
Ppp2ca
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213114,028,481 - 114,052,523 (+)NCBI
SpeTri2.0NW_0049366471,031,118 - 1,055,961 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP2CA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2136,494,541 - 136,522,646 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12136,497,780 - 136,522,630 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22142,095,024 - 142,123,724 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PPP2CA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12336,999,110 - 37,028,916 (-)NCBI
ChlSab1.1 Ensembl2336,997,078 - 37,029,280 (-)Ensembl
Vero_WHO_p1.0NW_02366603440,904,228 - 40,936,193 (+)NCBI
Ppp2ca
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473338,012,694 - 38,033,745 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023053   ⟹   ENSCLAP00000022842
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554085,433,268 - 5,460,361 (-)Ensembl
RefSeq Acc Id: XM_005376137   ⟹   XP_005376194
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554085,435,117 - 5,460,361 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005376194 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005376194   ⟸   XM_005376137
- Sequence:
RefSeq Acc Id: ENSCLAP00000022842   ⟸   ENSCLAT00000023053


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000015668 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000022842 ENTREZGENE
Ensembl Transcript ENSCLAT00000023053 ENTREZGENE
NCBI Gene Ppp2ca ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Ppp2ca  protein phosphatase 2 catalytic subunit alpha    protein phosphatase 2, catalytic subunit, alpha isozyme  Symbol and/or name change 5135510 APPROVED