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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis
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Accession:PW:0000085 term browser browse the term
Definition:Those pathways involved in and/or controlling DNA replication, cell cycle, DNA repair and maintenance of genomic integrity, RNA and protein biosynthesis.


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3'-end pre-mRNA processing pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 3:72,125,269...72,137,122
Ensembl chr 3:72,125,273...72,128,973
JBrowse link
G Cpsf1 cleavage and polyadenylation specific factor 1 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 7:117,661,779...117,672,373
Ensembl chr 7:117,661,661...117,672,373
JBrowse link
G Cpsf2 cleavage and polyadenylation specific factor 2 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 6:125,870,372...125,898,039
Ensembl chr 6:125,870,372...125,898,874
JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 6:43,363,792...43,391,712
Ensembl chr 6:43,363,792...43,391,712
JBrowse link
G Cpsf4 cleavage and polyadenylation specific factor 4 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chr12:11,199,893...11,215,690
Ensembl chr12:11,199,898...11,215,708
JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 7:60,385,688...60,417,661
Ensembl chr 7:60,385,688...60,416,925
JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 1:226,572,399...226,596,185
Ensembl chr 1:226,573,105...226,596,131
JBrowse link
G Cstf1 cleavage stimulation factor subunit 1 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 3:170,380,413...170,392,162
Ensembl chr 3:170,380,719...170,392,160
JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr  X:104,882,726...104,909,746
Ensembl chr  X:104,882,704...104,909,739
JBrowse link
G Cstf2t cleavage stimulation factor subunit 2, tau variant ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 1:249,574,954...249,578,520
Ensembl chr 1:249,574,954...249,578,520
JBrowse link
G Cstf3 cleavage stimulation factor subunit 3 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 3:94,530,586...94,603,378
Ensembl chr 3:94,530,586...94,607,588
JBrowse link
G Dxo decapping exoribonuclease ISO RGD PMID:21957020 RGD:9681741 NCBI chr20:4,517,307...4,519,391
Ensembl chr20:4,517,307...4,519,389
JBrowse link
G Fip1l1 factor interacting with PAPOLA and CPSF1 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr14:36,150,381...36,208,395
Ensembl chr14:36,150,399...36,208,373
JBrowse link
G Nudt21 nudix hydrolase 21 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 ISO RGD PMID:24243805 RGD:9681742 NCBI chr15:33,555,640...33,560,251
Ensembl chr15:33,555,640...33,560,242
JBrowse link
G Papola poly (A) polymerase alpha ISO RGD PMID:24243805 RGD:9681742 NCBI chr 6:129,609,068...129,662,002
Ensembl chr 6:129,609,074...129,661,531
JBrowse link
G Papolb poly(A) polymerase beta ISO RGD PMID:24243805 RGD:9681742 NCBI chr12:14,112,426...14,114,772 JBrowse link
G Papolg poly(A) polymerase gamma ISO RGD PMID:24243805 RGD:9681742 NCBI chr14:108,624,359...108,658,371
Ensembl chr14:108,624,359...108,658,371
JBrowse link
G Pcf11 PCF11 cleavage and polyadenylation factor subunit ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 1:157,463,014...157,494,134
Ensembl chr 1:157,468,626...157,494,008
JBrowse link
G Sympk symplekin ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr 1:79,931,097...79,959,461
Ensembl chr 1:79,931,156...79,959,461
JBrowse link
G Wdr33 WD repeat domain 33 ISO RGD PMID:21957020, PMID:24243805 RGD:9681741, RGD:9681742 NCBI chr18:24,584,832...24,689,681
Ensembl chr18:24,584,900...24,689,636
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:21957020 RGD:9681741 NCBI chr 3:141,224,858...141,298,272
Ensembl chr 3:141,225,290...141,298,265
JBrowse link
5'-end pre-mRNA capping pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncbp1 nuclear cap binding protein subunit 1 ISO RGD PMID:24354960 RGD:9684851 NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISO RGD PMID:24354960 RGD:9684851 NCBI chr11:72,071,838...72,103,087
Ensembl chr11:72,921,282...72,929,003
Ensembl chr11:72,921,282...72,929,003
JBrowse link
G Ramac RNA guanine-7 methyltransferase activating subunit ISO RGD PMID:24354960 RGD:9684851 NCBI chr 1:143,583,675...143,589,563
Ensembl chr 1:143,583,675...143,589,556
JBrowse link
G Rngtt RNA guanylyltransferase and 5'-phosphatase ISO RGD PMID:24354960 RGD:9684851 NCBI chr 5:48,561,325...48,779,214
Ensembl chr 5:48,561,339...48,779,207
JBrowse link
G Rnmt RNA (guanine-7-) methyltransferase ISO RGD PMID:24354960 RGD:9684851 NCBI chr18:64,084,746...64,108,246
Ensembl chr18:64,084,795...64,108,246
JBrowse link
aldosterone signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 IEA KEGG rno:04960 NCBI chr 2:204,003,742...204,032,023
Ensembl chr 2:204,003,742...204,032,023
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 IEA KEGG rno:04960 NCBI chr13:90,651,682...90,676,629
Ensembl chr13:90,651,686...90,676,629
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 IEA KEGG rno:04960 NCBI chr 1:81,852,423...81,881,565
Ensembl chr 1:81,852,429...81,881,549
JBrowse link
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 IEA KEGG rno:04960 NCBI chr13:90,605,792...90,642,032
Ensembl chr13:90,605,794...90,641,772
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 IEA KEGG rno:04960 NCBI chr13:82,737,161...82,757,681
Ensembl chr13:82,737,159...82,758,004
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 IEA KEGG rno:04960 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 IEA KEGG rno:04960 NCBI chr 8:104,190,032...104,221,342
Ensembl chr 8:104,190,032...104,221,342
JBrowse link
G Atp1b4 ATPase Na+/K+ transporting family member beta 4 IEA KEGG rno:04960 NCBI chr  X:124,631,544...124,652,520
Ensembl chr  X:124,631,881...124,652,975
JBrowse link
G Casp8ap2 caspase 8 associated protein 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 5:47,853,699...47,891,147
Ensembl chr 5:47,853,818...47,891,668
JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:21784126 RGD:7421504 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Daxx death-domain associated protein ISO RGD PMID:21784126 RGD:7421504 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Dhx9 DExH-box helicase 9 ISO RGD PMID:21784126 RGD:7421504 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Ell elongation factor for RNA polymerase II ISO RGD PMID:21784126 RGD:7421504 NCBI chr16:20,594,129...20,641,441
Ensembl chr16:20,594,072...20,641,908
JBrowse link
G Faf1 Fas associated factor 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 5:129,370,767...129,738,393
Ensembl chr 5:129,448,879...129,738,252
JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 4:161,748,993...161,757,447
Ensembl chr 4:161,748,993...161,757,447
JBrowse link
G Fkbp5 FKBP prolyl isomerase 5 ISO RGD PMID:21784126 RGD:7421504 NCBI chr20:7,976,704...8,097,290
Ensembl chr20:7,976,713...8,019,020
JBrowse link
G Fxyd2 FXYD domain-containing ion transport regulator 2 IEA KEGG rno:04960 NCBI chr 8:49,710,334...49,717,492
Ensembl chr 8:49,710,477...49,716,955
JBrowse link
G Fxyd4 FXYD domain-containing ion transport regulator 4 IEA KEGG rno:04960 NCBI chr 4:149,984,206...149,988,744
Ensembl chr 4:149,984,206...149,988,295
JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 IEA KEGG rno:04960 NCBI chr13:111,946,626...111,996,536
Ensembl chr13:111,926,442...111,972,603
JBrowse link
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 IEA KEGG rno:04960 NCBI chr19:37,476,083...37,481,326
Ensembl chr19:37,476,095...37,481,307
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Igf1 insulin-like growth factor 1 IEA KEGG rno:04960 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Ins1 insulin 1 IEA KEGG rno:04960 NCBI chr 1:272,799,784...272,800,351
Ensembl chr 1:272,799,784...272,800,347
JBrowse link
G Ins2 insulin 2 IEA KEGG rno:04960 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Insr insulin receptor IEA KEGG rno:04960 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Irs1 insulin receptor substrate 1 IEA KEGG rno:04960 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Irs2 insulin receptor substrate 2 IEA KEGG rno:04960 NCBI chr16:83,824,515...83,848,569
Ensembl chr16:83,824,430...83,848,684
JBrowse link
G Irs3 insulin receptor substrate 3 IEA KEGG rno:04960 NCBI chr12:22,120,305...22,125,103
Ensembl chr12:22,122,953...22,125,091
JBrowse link
G Irs4 insulin receptor substrate 4 IEA KEGG rno:04960 NCBI chr  X:113,003,824...113,018,088 JBrowse link
G Jak2 Janus kinase 2 IMP RGD PMID:15932931 RGD:1641841 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509
JBrowse link
G Kcnj1 potassium inwardly-rectifying channel, subfamily J, member 1 IEA KEGG rno:04960 NCBI chr 8:33,490,280...33,519,127
Ensembl chr 8:33,514,042...33,518,165
JBrowse link
G Kras KRAS proto-oncogene, GTPase IEA KEGG rno:04960 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Mapk1 mitogen activated protein kinase 1 IEA KEGG rno:04960 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 IEA KEGG rno:04960 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 5:5,466,544...5,696,540
Ensembl chr 5:5,616,483...5,694,598
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase IEA KEGG rno:04960 NCBI chr18:60,392,376...60,719,720
Ensembl chr18:60,392,376...60,719,720
JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma ISO RGD PMID:21784126 RGD:7421504 NCBI chr 5:139,687,442...139,760,154
Ensembl chr 5:139,687,448...139,749,050
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 IEA
ISO
KEGG PMID:21784126 rno:04960, RGD:7421504 NCBI chr19:34,408,275...34,761,003
Ensembl chr19:34,448,289...34,752,695
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 IEA KEGG rno:04960 NCBI chr10:13,446,373...13,525,248
Ensembl chr10:13,451,624...13,515,448
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 8:67,771,720...67,869,015
Ensembl chr 8:67,771,720...67,869,019
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha IEA KEGG rno:04960 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta IEA KEGG rno:04960 NCBI chr 8:107,275,849...107,381,088
Ensembl chr 8:107,275,725...107,380,933
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta IEA KEGG rno:04960 NCBI chr 5:166,602,053...166,628,028
Ensembl chr 5:166,602,053...166,628,028
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEA KEGG rno:04960 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 IEA KEGG rno:04960 NCBI chr16:20,415,109...20,424,982
Ensembl chr16:20,416,432...20,424,980
JBrowse link
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 IEA KEGG rno:04960 NCBI chr 5:135,069,972...135,145,633
Ensembl chr 5:135,074,297...135,142,488
JBrowse link
G Pik3r5 phosphoinositide-3-kinase, regulatory subunit 5 IEA KEGG rno:04960 NCBI chr10:55,013,686...55,078,986
Ensembl chr10:55,013,703...55,080,421
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:21784126 RGD:7421504 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prkca protein kinase C, alpha IEA KEGG rno:04960 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Prkcb protein kinase C, beta IEA KEGG rno:04960 NCBI chr 1:192,233,569...192,575,339
Ensembl chr 1:192,233,910...192,574,831
JBrowse link
G Prkcg protein kinase C, gamma IEA KEGG rno:04960 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha IEA KEGG rno:04960 NCBI chr 4:157,834,339...157,860,472
Ensembl chr 4:157,836,912...157,860,049
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta IEA KEGG rno:04960 NCBI chr 1:191,829,547...191,883,991
Ensembl chr 1:191,829,555...191,884,298
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma IEA KEGG rno:04960 NCBI chr 1:191,704,397...191,738,271
Ensembl chr 1:191,704,311...191,738,268
JBrowse link
G Sfn stratifin IEA KEGG rno:04960 NCBI chr 5:151,823,422...151,824,937
Ensembl chr 5:151,823,887...151,824,633
JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 IEA KEGG rno:04960 NCBI chr 1:24,185,451...24,302,309
Ensembl chr 1:24,185,435...24,302,298
JBrowse link
G Slc9a3r2 SLC9A3 regulator 2 IEA KEGG rno:04960 NCBI chr10:14,003,330...14,015,066
Ensembl chr10:14,003,320...14,013,870
JBrowse link
G Ube2i ubiquitin-conjugating enzyme E2I ISO RGD PMID:21784126 RGD:7421504 NCBI chr10:14,618,615...14,639,274
Ensembl chr10:14,620,531...14,630,151
JBrowse link
altered androgen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO RGD PMID:18008377, PMID:23759327 RGD:2326139, RGD:8693397 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:23759327 RGD:8693397 NCBI chr 5:5,466,544...5,696,540
Ensembl chr 5:5,616,483...5,694,598
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO RGD PMID:23759327 RGD:8693397 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
altered DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase ISO in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP RGD PMID:24004570 RGD:9588971 NCBI chr 4:147,744,673...147,756,462
Ensembl chr 4:147,746,186...147,756,294
JBrowse link
altered G1/S transition pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO RGD PMID:18772397 RGD:5490966 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
altered hypoxia inducible factor pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:22035299 RGD:6907133 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
altered mismatch repair pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 ISO RGD PMID:11900875, PMID:19078924 RGD:2306714, RGD:4143515 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Msh2 mutS homolog 2 ISO RGD PMID:11900875 RGD:2306714 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Msh6 mutS homolog 6 ISO RGD PMID:11900875 RGD:2306714 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component ISO RGD PMID:11900875 RGD:2306714 NCBI chr 9:53,120,656...53,206,520
Ensembl chr 9:53,120,656...53,206,516
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component ISO RGD PMID:11900875 RGD:2306714 NCBI chr12:12,714,394...12,738,654
Ensembl chr12:12,714,394...12,738,641
JBrowse link
altered nucleotide excision repair pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage-specific DNA binding protein 1 ISO RGD PMID:22824526 RGD:7246919 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO RGD PMID:22824526 RGD:7246919 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO RGD PMID:22824526 RGD:7246919 NCBI chr18:25,037,668...25,068,380
Ensembl chr18:25,037,625...25,068,389
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO in silico assessment of alteration of DNA-protein, protein-protein interactions and observed reduction of DNA repair capacity in the context of nucleotide excision repair pathway for SNP RGD PMID:22824526, PMID:24004570 RGD:7246919, RGD:9588971 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO RGD PMID:22824526 RGD:7246919 NCBI chr 9:50,928,847...50,970,962
Ensembl chr 9:50,925,619...50,970,955
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO RGD PMID:22824526 RGD:7246919 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ISO RGD PMID:22824526 RGD:7246919 NCBI chr 2:39,434,617...39,473,392
Ensembl chr 2:39,434,634...39,472,017
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor ISO RGD PMID:22824526 RGD:7246919 NCBI chr 5:61,749,767...61,793,641
Ensembl chr 5:61,749,767...61,792,928
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor ISO RGD PMID:22824526 RGD:7246919 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
altered p53 signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:22713868 RGD:8663430 NCBI chr 8:33,756,634...33,879,625
Ensembl chr 8:33,816,386...33,879,625
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:19165225, PMID:23262034 RGD:2316186, RGD:8663434 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mdm4 MDM4 regulator of p53 ISO RGD PMID:23262034 RGD:8663434 NCBI chr13:49,786,776...49,828,780
Ensembl chr13:49,792,794...49,828,720
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:23263379 RGD:8663431 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha ISO RGD PMID:23263379, PMID:22713868 RGD:8663431, RGD:8663430 NCBI chr 9:14,551,752...14,577,002
Ensembl chr 9:14,551,758...14,576,967
JBrowse link
G Nfyb nuclear transcription factor Y subunit beta ISO RGD PMID:23263379, PMID:22713868 RGD:8663431, RGD:8663430 NCBI chr 7:27,081,667...27,097,481
Ensembl chr 7:27,081,667...27,097,479
JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma ISO RGD PMID:23263379, PMID:22713868 RGD:8663431, RGD:8663430 NCBI chr 5:139,687,442...139,760,154
Ensembl chr 5:139,687,448...139,749,050
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO RGD PMID:22713868 RGD:8663430 NCBI chr 8:21,669,236...21,680,615
Ensembl chr 8:21,669,236...21,680,615
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:23263379, PMID:22713868 RGD:8663431, RGD:8663430 NCBI chr 7:123,381,082...123,438,605
Ensembl chr 7:123,381,077...123,438,603
JBrowse link
G Tp53 tumor protein p53 ISO DNA:mutations:exon RGD PMID:19165225, PMID:23759327, PMID:22713868, PMID:23263379, PMID:18772397, PMID:20951313, PMID:19078924 RGD:2316186, RGD:8693397, RGD:8663430, RGD:8663431, RGD:5490966, RGD:5133242, RGD:4143515 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp63 tumor protein p63 ISO RGD PMID:23263379, PMID:22713868 RGD:8663431, RGD:8663430 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Tp73 tumor protein p73 ISO RGD PMID:23263379, PMID:22713868 RGD:8663431, RGD:8663430 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:22713868 RGD:8663430 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
altered SWI/SNF family mediated chromatin remodeling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A ISO RGD PMID:23355908 RGD:8694154 NCBI chr 2:119,112,776...119,128,870
Ensembl chr 2:119,112,513...119,129,751
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO RGD PMID:23355908 RGD:8694154 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Arid1b AT-rich interaction domain 1B ISO RGD PMID:23355908 RGD:8694154 NCBI chr 1:45,923,119...46,232,301
Ensembl chr 1:45,923,222...46,234,874
JBrowse link
G Pbrm1 polybromo 1 ISO RGD PMID:23355908 RGD:8694154 NCBI chr16:7,103,714...7,202,899
Ensembl chr16:7,103,998...7,200,362
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:23355908 RGD:8694154 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
aminoacyl-tRNA biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr19:43,193,264...43,215,281
Ensembl chr19:43,193,257...43,215,281
JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 9:17,869,301...17,881,762
Ensembl chr 9:17,869,124...17,880,706
JBrowse link
G Cars cysteinyl-tRNA synthetase IEA KEGG rno:00970 NCBI chr 1:216,759,367...216,801,652
Ensembl chr 1:216,759,366...216,801,656
JBrowse link
G Dars1 aspartyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr13:45,074,067...45,127,815
Ensembl chr13:45,074,072...45,127,815
JBrowse link
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) IEA KEGG rno:00970 NCBI chr13:78,857,638...78,885,464
Ensembl chr13:78,857,638...78,885,464
JBrowse link
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:191,997,512...192,025,350
Ensembl chr 1:191,997,512...192,025,350
JBrowse link
G Eprs glutamyl-prolyl-tRNA synthetase IEA KEGG rno:00970 NCBI chr13:103,300,911...103,371,651
Ensembl chr13:103,300,932...103,371,577
JBrowse link
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr17:29,006,981...29,438,906
Ensembl chr17:29,006,988...29,438,668
JBrowse link
G Farsa phenylalanyl-tRNA synthetase subunit alpha IEA KEGG rno:00970 NCBI chr19:25,969,255...25,978,777
Ensembl chr19:25,969,255...25,978,776
JBrowse link
G Farsb phenylalanyl-tRNA synthetase subunit beta IEA KEGG rno:00970 NCBI chr 9:84,324,456...84,383,674
Ensembl chr 9:84,324,442...84,383,687
JBrowse link
G Gars glycyl-tRNA synthetase IEA KEGG rno:00970 NCBI chr 4:85,235,122...85,276,085
Ensembl chr 4:85,235,172...85,276,044
JBrowse link
G Hars1 histidyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:29,611,545...29,629,087
Ensembl chr18:29,611,547...29,629,087
JBrowse link
G Iars1 isoleucyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr17:15,356,016...15,402,680
Ensembl chr17:15,355,529...15,402,649
JBrowse link
G Kars lysyl-tRNA synthetase IEA KEGG rno:00970 NCBI chr19:44,212,205...44,231,209
Ensembl chr19:44,212,206...44,231,157
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:36,524,013...36,579,471
Ensembl chr18:36,524,007...36,579,403
JBrowse link
G Lars2 leucyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 8:132,441,277...132,537,176
Ensembl chr 8:132,441,285...132,536,369
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 7:70,585,011...70,602,425
Ensembl chr 7:70,585,013...70,602,310
JBrowse link
G Mars2 methionyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 9:64,434,814...64,437,730
Ensembl chr 9:64,434,904...64,436,664
Ensembl chr 9:64,434,904...64,436,664
JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase IEA KEGG rno:00970 NCBI chr 8:70,952,209...70,986,393
Ensembl chr 8:70,952,203...70,986,408
JBrowse link
G Nars1 asparaginyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:59,986,350...60,002,644
Ensembl chr18:59,986,360...60,002,569
JBrowse link
G Nars2 asparaginyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:161,922,132...162,035,817
Ensembl chr 1:161,922,141...162,034,700
JBrowse link
G Pars2 prolyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 5:126,254,090...126,259,204
Ensembl chr 5:126,254,142...126,259,200
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 8:117,297,670...117,305,708
Ensembl chr 8:117,297,670...117,305,702
JBrowse link
G Rars1 arginyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr10:20,633,630...20,658,074
Ensembl chr10:20,633,632...20,658,100
JBrowse link
G Rars2 arginyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 5:50,075,510...50,127,625
Ensembl chr 5:50,075,527...50,127,424
JBrowse link
G Sars1 seryl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 2:211,219,743...211,235,475
Ensembl chr 2:211,219,750...211,235,467
JBrowse link
G Sars2 seryl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:86,923,769...86,935,506
Ensembl chr 1:86,923,591...86,935,904
JBrowse link
G Tars1 threonyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 2:61,394,632...61,414,115
Ensembl chr 2:61,394,770...61,414,102
JBrowse link
G Tars2 threonyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 2:197,861,071...197,881,347
Ensembl chr 2:197,861,115...197,878,142
JBrowse link
G Tars3 threonyl-tRNA synthetase 3 IEA KEGG rno:00970 NCBI chr 1:126,523,169...126,559,493
Ensembl chr 1:126,523,169...126,559,489
JBrowse link
G Vars1 valyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr20:4,993,539...5,008,259
Ensembl chr20:4,993,560...5,008,262
JBrowse link
G Vars2 valyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr20:3,588,462...3,599,514
Ensembl chr20:3,588,497...3,599,514
JBrowse link
G Wars1 tryptophanyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 6:132,771,026...132,802,262
Ensembl chr 6:132,771,021...132,802,210
JBrowse link
G Wars2 tryptophanyl tRNA synthetase 2 (mitochondrial) IEA KEGG rno:00970 NCBI chr 2:201,170,363...201,256,115
Ensembl chr 2:201,172,312...201,255,703
JBrowse link
G Yars1 tyrosyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 5:147,375,350...147,403,578
Ensembl chr 5:147,375,350...147,403,571
JBrowse link
G Yars2 tyrosyl-tRNA synthetase 2 IEA KEGG rno:00970 NCBI chr11:88,882,615...88,888,377
Ensembl chr11:88,882,616...88,888,377
JBrowse link
androgen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO RGD PMID:16356826 RGD:2326084 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:17163421 RGD:2326123 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:16356826 RGD:2326084 NCBI chr19:22,569,999...22,588,143
Ensembl chr19:22,569,999...22,588,137
JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:17163421 RGD:2326123 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:16356826 RGD:2326084 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:17163421 RGD:2326123 NCBI chr 5:5,466,544...5,696,540
Ensembl chr 5:5,616,483...5,694,598
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO RGD PMID:17163421 RGD:2326123 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO RGD PMID:17163421 RGD:2326123 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 IMP RGD PMID:9920921 RGD:70792 NCBI chr18:73,479,863...73,524,956
Ensembl chr18:73,378,662...73,524,956
JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr 1:100,971,132...100,980,411
Ensembl chr 1:100,971,273...100,980,340
JBrowse link
G St13 ST13, Hsp70 interacting protein ISO RGD PMID:16356826 RGD:2326084 NCBI chr 7:122,585,770...122,635,731
Ensembl chr 7:122,585,771...122,635,731
JBrowse link
G Stip1 stress-induced phosphoprotein 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chr 1:222,274,133...222,293,139
Ensembl chr 1:222,274,133...222,293,148
JBrowse link
aryl hydrocarbon receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO RGD PMID:10639156 RGD:1300277 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator ISO RGD PMID:1317062 RGD:41410437 NCBI chr 2:196,594,178...196,651,486
Ensembl chr 2:196,594,303...196,651,179
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 TAS RGD PMID:12859947 RGD:631760 NCBI chr 1:146,399,217...146,556,437
Ensembl chr 1:146,399,217...146,556,171
JBrowse link
G test test1 TAS
ISS
IEP
IDA
RGD PMID:12586752, PMID:12586752, PMID:12586752, PMID:12586752 RGD:634668, RGD:634668, RGD:634668, RGD:634668
ataxia telangiectasia-mutated (ATM) signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:23532176, PMID:21533982 RGD:8661225, RGD:8661232 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B ISO RGD PMID:24002223 RGD:8661242 NCBI chr12:24,478,882...24,536,851
Ensembl chr12:24,478,898...24,537,313
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO RGD PMID:24326623 RGD:8661237 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 9:9,863,380...9,865,920
Ensembl chr 9:9,863,404...9,865,920
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 5:150,833,754...150,915,390
Ensembl chr 5:150,787,043...150,913,757
JBrowse link
G H2ax H2A.X variant histone ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:23532176, PMID:21533982 RGD:8661225, RGD:8661232 NCBI chr 1:220,967,795...220,974,596
Ensembl chr 1:220,967,796...220,974,597
JBrowse link
G Kdm4a lysine demethylase 4A ISO RGD PMID:24326623, PMID:24002223 RGD:8661237, RGD:8661242 NCBI chr 5:136,967,650...137,014,402
Ensembl chr 5:136,967,650...137,014,430
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ISO RGD PMID:24326623, PMID:24002223 RGD:8661237, RGD:8661242 NCBI chr 3:159,316,580...159,348,914
Ensembl chr 3:159,321,310...159,347,631
JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chr20:3,405,017...3,419,831
Ensembl chr20:3,404,711...3,419,831
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:21533982 RGD:8661232 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Nbn nibrin ISO RGD PMID:21533982 RGD:8661232 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 1:222,451,674...222,459,952
Ensembl chr 1:222,451,674...222,459,952
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 8:67,771,720...67,869,015
Ensembl chr 8:67,771,720...67,869,019
JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 7:11,414,565...11,428,090
Ensembl chr 7:11,414,446...11,428,552
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chr10:72,909,550...72,945,884
Ensembl chr10:72,909,550...72,945,884
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chr10:37,534,449...37,554,861
Ensembl chr10:37,535,871...37,554,664
JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit ISO RGD PMID:24002223 RGD:8661242 NCBI chr 1:198,219,012...198,225,775
Ensembl chr 1:198,219,054...198,225,580
JBrowse link
G Ppp5c protein phosphatase 5, catalytic subunit ISO RGD PMID:21533982 RGD:8661232 NCBI chr 1:78,944,054...78,968,361
Ensembl chr 1:78,944,040...78,968,329
JBrowse link
G Ppp6c protein phosphatase 6, catalytic subunit ISO RGD PMID:24002223 RGD:8661242 NCBI chr 3:23,478,123...23,510,959
Ensembl chr 3:23,480,266...23,510,959
JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 3:47,578,449...47,673,330
Ensembl chr 3:47,578,384...47,673,338
JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor ISO RGD PMID:24326623 RGD:8661237 NCBI chr 7:12,331,288...12,348,263
Ensembl chr 7:12,331,416...12,346,475
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO RGD PMID:21533982 RGD:8661232 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease ISO RGD PMID:24326623 RGD:8661237 NCBI chr18:3,134,630...3,227,702
Ensembl chr18:3,162,543...3,227,688
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO RGD PMID:24326623 RGD:8661237 NCBI chr 3:37,599,540...37,648,818
Ensembl chr 3:37,599,728...37,647,631
JBrowse link
G Rnf168 ring finger protein 168 ISO RGD PMID:21533982, PMID:24326623 RGD:8661232, RGD:8661237 NCBI chr11:71,721,242...71,743,421
Ensembl chr11:71,721,250...71,743,421
JBrowse link
G Rnf20 ring finger protein 20 ISO RGD PMID:23532176 RGD:8661225 NCBI chr 5:64,892,996...64,920,397
Ensembl chr 5:64,892,802...64,920,390
JBrowse link
G Rnf4 ring finger protein 4 ISO RGD PMID:24002223 RGD:8661242 NCBI chr14:81,658,400...81,679,756
Ensembl chr14:81,660,354...81,679,082
JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:23532176 RGD:8661225 NCBI chr 1:199,037,472...199,052,823
Ensembl chr 1:199,037,544...199,052,172
JBrowse link
G Rnf8 ring finger protein 8 ISO RGD PMID:21533982, PMID:24326623 RGD:8661232, RGD:8661237 NCBI chr20:8,285,380...8,309,858
Ensembl chr20:8,285,296...8,309,908
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:24326623 RGD:8661237 NCBI chr 3:113,160,030...113,259,701
Ensembl chr 3:113,160,000...113,231,790
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 9:92,305,059...92,435,388
Ensembl chr 9:92,305,051...92,435,365
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N ISO RGD PMID:21533982, PMID:24326623 RGD:8661232, RGD:8661237 NCBI chr 7:36,610,147...36,640,190
Ensembl chr 7:36,610,147...36,640,189
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 7:76,789,110...76,835,517
NCBI chr 7:76,839,661...76,907,441
Ensembl chr 7:76,789,531...76,853,840
JBrowse link
G Usp16 ubiquitin specific peptidase 16 ISO RGD PMID:24002223 RGD:8661242 NCBI chr11:27,101,213...27,130,345
Ensembl chr11:27,101,227...27,130,341
JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 8:72,207,970...72,284,871
Ensembl chr 8:72,207,972...72,284,873
JBrowse link
G Usp44 ubiquitin specific peptidase 44 ISO RGD PMID:24002223 RGD:8661242 NCBI chr 7:34,714,293...34,759,352
Ensembl chr 7:34,744,483...34,759,206
JBrowse link
G Vcp valosin-containing protein ISO RGD PMID:24326623, PMID:24002223 RGD:8661237, RGD:8661242 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
base excision repair pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 IEA
ISS
KEGG PMID:, PMID:16221808 rno:03410, RGD:1358139, RGD:1578408 NCBI chr15:27,849,943...27,852,083
Ensembl chr15:27,849,979...27,852,082
JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 IEA KEGG rno:03410 NCBI chr  X:23,146,085...23,166,676
Ensembl chr  X:23,146,085...23,166,675
JBrowse link
G Fen1 flap structure-specific endonuclease 1 IEA KEGG rno:03410 NCBI chr 1:226,251,516...226,256,160
Ensembl chr 1:226,251,518...226,255,886
JBrowse link
G Hmg1l1 high-mobility group (nonhistone chromosomal) protein 1-like 1 IEA KEGG rno:03410 NCBI chr19:59,984,234...59,985,494
Ensembl chr19:59,984,234...59,985,494
JBrowse link
G Hmgb1 high mobility group box 1 IEA KEGG rno:03410 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Lig1 DNA ligase 1 IEA KEGG PMID: rno:03410, RGD:1358139 NCBI chr 1:75,356,212...75,394,757
Ensembl chr 1:75,356,220...75,394,758
JBrowse link
G Lig3 DNA ligase 3 IEA KEGG rno:03410 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase IEA KEGG rno:03410 NCBI chr 4:147,744,673...147,756,462
Ensembl chr 4:147,746,186...147,756,294
JBrowse link
G Mpg N-methylpurine-DNA glycosylase IEA KEGG PMID: rno:03410, RGD:1358139 NCBI chr10:15,661,768...15,667,995
Ensembl chr10:15,661,608...15,668,022
JBrowse link
G Mutyh mutY DNA glycosylase IEA KEGG rno:03410 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Neil1 nei-like DNA glycosylase 1 IEA KEGG rno:03410 NCBI chr 8:61,817,258...61,824,023
Ensembl chr 8:61,817,258...61,823,102
JBrowse link
G Neil2 nei-like DNA glycosylase 2 IEA KEGG rno:03410 NCBI chr15:46,371,780...46,382,730
Ensembl chr15:46,372,485...46,381,967
JBrowse link
G Neil3 nei-like DNA glycosylase 3 IEA KEGG rno:03410 NCBI chr16:41,079,444...41,138,505
Ensembl chr16:41,079,444...41,138,505
JBrowse link
G Nthl1 nth-like DNA glycosylase 1 IEA KEGG rno:03410 NCBI chr10:13,996,660...14,002,827
Ensembl chr10:13,996,645...14,002,910
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISS
IEA
KEGG PMID:16221808 rno:03410, RGD:1578408 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEA KEGG rno:03410 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 IEA KEGG rno:03410 NCBI chr15:27,739,416...27,749,650
Ensembl chr15:27,739,251...27,749,648
JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 IEA KEGG rno:03410 NCBI chr 8:115,173,440...115,179,543
Ensembl chr 8:115,173,453...115,179,191
JBrowse link
G Pcna proliferating cell nuclear antigen IEA KEGG rno:03410 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Polb DNA polymerase beta IEA KEGG rno:03410 NCBI chr16:74,237,001...74,260,272
Ensembl chr16:74,237,001...74,260,271
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit IEA KEGG rno:03410 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit IEA KEGG rno:03410 NCBI chr14:86,111,416...86,117,578
Ensembl chr14:86,111,294...86,117,578
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit IEA KEGG rno:03410 NCBI chr 1:165,085,142...165,122,385
Ensembl chr 1:165,083,622...165,123,455
JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit IEA KEGG rno:03410 NCBI chr 1:219,480,841...219,483,244
Ensembl chr 1:219,481,575...219,483,241
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit IEA KEGG rno:03410 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Pole2 DNA polymerase epsilon 2, accessory subunit IEA KEGG rno:03410 NCBI chr 6:91,494,348...91,532,355
Ensembl chr 6:91,494,393...91,518,996
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit IEA KEGG rno:03410 NCBI chr 5:78,380,813...78,384,047
Ensembl chr 5:78,380,816...78,384,047
JBrowse link
G Pole4 DNA polymerase epsilon 4, accessory subunit IEA KEGG rno:03410 NCBI chr 4:113,491,644...113,497,455
Ensembl chr 4:113,491,644...113,497,455
JBrowse link
G Poll DNA polymerase lambda IEA KEGG rno:03410 NCBI chr 1:265,290,337...265,298,847
Ensembl chr 1:265,290,339...265,298,797
JBrowse link
G RGD1563668 similar to High mobility group protein 1 (HMG-1) IEA KEGG rno:03410 NCBI chr10:40,994,237...40,994,990 JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 IEA KEGG rno:03410 NCBI chr 7:144,774,155...144,788,333
Ensembl chr 7:144,774,160...144,778,656
JBrowse link
G Tdg thymine-DNA glycosylase IEA KEGG rno:03410 NCBI chr 7:27,194,000...27,213,676
Ensembl chr 7:27,193,998...27,214,236
JBrowse link
G Ung uracil-DNA glycosylase IEA KEGG rno:03410 NCBI chr12:48,246,593...48,255,547
Ensembl chr12:48,246,569...48,254,822
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISS
IEA
KEGG PMID:16221808 rno:03410, RGD:1578408 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
bile acid signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 IDA RGD PMID:27090119 RGD:15090804 NCBI chr 3:55,480,024...55,587,946
Ensembl chr 3:55,480,024...55,587,946
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IDA RGD PMID:27090119 RGD:15090804 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252
JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 IEP RGD PMID:30223280 RGD:15045612 NCBI chr15:103,695,415...103,927,980
Ensembl chr15:103,696,557...103,927,592
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 IEP RGD PMID:30223280 RGD:15045612 NCBI chr 4:123,516,553...123,564,067
Ensembl chr 4:123,516,788...123,557,501
JBrowse link
G Cideb cell death-inducing DFFA-like effector b IEP RGD PMID:25263431 RGD:15045610 NCBI chr15:34,439,844...34,444,244
Ensembl chr15:34,439,876...34,444,244
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 ISO RGD PMID:28774887 RGD:15045601 NCBI chr 9:81,968,285...81,998,213
Ensembl chr 9:81,968,332...81,998,169
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 ISO
IEP
RGD PMID:28774887, PMID:30223280 RGD:15045601, RGD:15045612 NCBI chr 5:19,358,734...19,368,431
Ensembl chr 5:19,358,734...19,368,431
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 8:130,548,418...130,550,388
Ensembl chr 8:130,548,418...130,550,388
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 1:164,113,459...164,143,818
Ensembl chr 1:164,113,459...164,143,818
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IEP RGD PMID:25263431 RGD:15045610 NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IMP
IDA
IEP
ISO
RGD PMID:30068870, PMID:27090119, PMID:30061734, PMID:25263431, PMID:30223280, PMID:28774887, PMID:29235094 RGD:15042870, RGD:15090804, RGD:15092071, RGD:15045610, RGD:15045612, RGD:15045601, RGD:15042872 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IDA RGD PMID:27090119 RGD:15090804 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Slc10a1 solute carrier family 10 member 1 IDA RGD PMID:27090119 RGD:15090804 NCBI chr 6:104,617,730...104,631,355
Ensembl chr 6:104,617,730...104,631,355
JBrowse link
G Slco1a4 solute carrier organic anion transporter family, member 1a4 IDA RGD PMID:27090119 RGD:15090804 NCBI chr 4:175,969,549...176,026,227
Ensembl chr 4:175,969,549...176,026,163
JBrowse link
cell cycle pathway, mitotic term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase IEA KEGG rno:04110 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Anapc1 anaphase promoting complex subunit 1 IEA KEGG rno:04110 NCBI chr 3:121,147,484...121,226,125
Ensembl chr 3:121,147,547...121,226,125
JBrowse link
G Anapc10 anaphase promoting complex subunit 10 IEA KEGG rno:04110 NCBI chr19:31,814,686...31,867,928
Ensembl chr19:31,815,319...31,867,850
JBrowse link
G Anapc11 anaphase promoting complex subunit 11 IEA KEGG rno:04110 NCBI chr10:109,774,779...109,785,877
Ensembl chr10:109,774,878...109,785,877
JBrowse link
G Anapc13 anaphase promoting complex subunit 13 IEA KEGG rno:04110 NCBI chr 8:111,107,358...111,115,774
Ensembl chr 8:111,107,358...111,115,774
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 IEA KEGG rno:04110 NCBI chr 3:2,490,496...2,502,247
Ensembl chr 3:2,490,518...2,502,248
JBrowse link
G Anapc4 anaphase promoting complex subunit 4 IEA KEGG rno:04110 NCBI chr14:60,471,962...60,503,803
Ensembl chr14:60,471,962...60,503,803
JBrowse link
G Anapc5 anaphase-promoting complex subunit 5 IEA KEGG rno:04110 NCBI chr12:39,209,134...39,242,696
Ensembl chr12:39,209,129...39,242,690
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 IEA KEGG rno:04110 NCBI chr12:39,613,898...39,641,999
Ensembl chr12:39,614,733...39,641,285
JBrowse link
G Atm ATM serine/threonine kinase IEA KEGG rno:04110 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase IEA KEGG rno:04110 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B IEA KEGG rno:04110 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Bub3 BUB3 mitotic checkpoint protein IEA KEGG rno:04110 NCBI chr 1:203,526,853...203,537,459
Ensembl chr 1:203,524,426...203,557,337
JBrowse link
G Ccna1 cyclin A1 IEA KEGG rno:04110 NCBI chr 2:144,456,689...144,503,570
Ensembl chr 2:144,458,153...144,467,912
JBrowse link
G Ccna2 cyclin A2 IEA KEGG rno:04110 NCBI chr 2:123,274,727...123,282,266
Ensembl chr 2:123,275,881...123,282,214
JBrowse link
G Ccnb1 cyclin B1 IEA KEGG rno:04110 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ccnb2 cyclin B2 IEA KEGG rno:04110 NCBI chr 8:76,847,972...76,861,165 JBrowse link
G Ccnb3 cyclin B3 IEA KEGG rno:04110 NCBI chr  X:16,300,752...16,402,206
Ensembl chr  X:16,337,102...16,402,202
JBrowse link
G Ccnd1 cyclin D1 IEA KEGG rno:04110 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Ccnd2 cyclin D2 IEA KEGG rno:04110 NCBI chr 4:159,674,885...159,697,207
Ensembl chr 4:159,674,885...159,697,207
JBrowse link
G Ccnd3 cyclin D3 IEA KEGG rno:04110 NCBI chr 9:15,404,816...15,410,905
Ensembl chr 9:15,404,822...15,410,943
JBrowse link
G Ccne1 cyclin E1 IEA KEGG rno:04110 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Ccne2 cyclin E2 IEA KEGG rno:04110 NCBI chr 5:24,434,077...24,446,406
Ensembl chr 5:24,434,872...24,446,406
JBrowse link
G Ccnh cyclin H IEA KEGG rno:04110 NCBI chr 2:13,593,100...13,613,910
Ensembl chr 2:13,593,100...13,613,910
JBrowse link
G Cdc14a cell division cycle 14A IEA KEGG rno:04110 NCBI chr 2:219,302,577...219,458,345
Ensembl chr 2:219,302,577...219,458,271
JBrowse link
G Cdc14b cell division cycle 14B IEA KEGG rno:04110 NCBI chr17:1,709,703...1,797,732
Ensembl chr17:1,703,943...1,797,750
JBrowse link
G Cdc16 cell division cycle 16 IEA KEGG rno:04110 NCBI chr16:81,493,355...81,516,493
Ensembl chr16:81,493,355...81,516,493
JBrowse link
G Cdc20 cell division cycle 20 IEA KEGG rno:04110 NCBI chr 5:137,260,728...137,264,931
Ensembl chr 5:137,260,739...137,265,015
JBrowse link
G Cdc23 cell division cycle 23 IEA KEGG rno:04110 NCBI chr18:27,430,924...27,452,569
Ensembl chr18:27,430,905...27,452,420
JBrowse link
G Cdc25a cell division cycle 25A IEA KEGG rno:04110 NCBI chr 8:117,953,223...117,971,552
Ensembl chr 8:117,953,444...117,971,519
JBrowse link
G Cdc25b cell division cycle 25B IEA KEGG rno:04110 NCBI chr 3:123,731,539...123,741,696
Ensembl chr 3:123,731,539...123,741,339
JBrowse link
G Cdc25c cell division cycle 25C IEA KEGG rno:04110 NCBI chr18:27,528,768...27,550,316
Ensembl chr18:27,528,354...27,550,224
JBrowse link
G Cdc26 cell division cycle 26 IEA KEGG rno:04110 NCBI chr 5:78,252,168...78,267,137
Ensembl chr 5:78,253,397...78,267,063
JBrowse link
G Cdc27 cell division cycle 27 IEA KEGG rno:04110 NCBI chr10:92,551,754...92,602,214
Ensembl chr10:92,554,081...92,602,082
JBrowse link
G Cdc6 cell division cycle 6 IEA KEGG rno:04110 NCBI chr10:86,819,477...86,833,301
Ensembl chr10:86,819,472...86,833,402
JBrowse link
G Cdc7 cell division cycle 7 IEA KEGG rno:04110 NCBI chr14:3,826,658...3,846,891
Ensembl chr14:3,826,659...3,846,891
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEA KEGG rno:04110 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Cdk2 cyclin dependent kinase 2 IEA KEGG rno:04110 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk4 cyclin-dependent kinase 4 IEA KEGG rno:04110 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cdk6 cyclin-dependent kinase 6 IEA KEGG rno:04110 NCBI chr 4:27,781,728...27,969,653
Ensembl chr 4:27,785,647...27,966,398
JBrowse link
G Cdk7 cyclin-dependent kinase 7 IEA KEGG rno:04110 NCBI chr 2:30,710,642...30,735,522
Ensembl chr 2:30,710,643...30,735,514
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A IEA KEGG rno:04110 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B IEA KEGG rno:04110 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C IEA KEGG rno:04110 NCBI chr 1:216,661,067...216,663,791
Ensembl chr 1:216,661,080...216,663,721
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IEA KEGG rno:04110 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B IEA KEGG rno:04110 NCBI chr 5:107,834,353...107,857,428
Ensembl chr 5:107,845,951...107,858,104
JBrowse link
G Cdkn2c cyclin-dependent kinase inhibitor 2C IEA KEGG rno:04110 NCBI chr 5:129,347,731...129,352,886
Ensembl chr 5:129,347,732...129,352,886
JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D IEA KEGG rno:04110
G Chek1 checkpoint kinase 1 IEA KEGG rno:04110 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Chek2 checkpoint kinase 2 IEA KEGG rno:04110 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link
G Crebbp CREB binding protein IEA KEGG rno:04110 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Cul1 cullin 1 IEA KEGG rno:04110 NCBI chr 4:77,211,814...77,283,369
Ensembl chr 4:77,211,692...77,280,250
JBrowse link
G Dbf4 DBF4 zinc finger IEA KEGG rno:04110 NCBI chr 4:22,898,527...22,914,091
Ensembl chr 4:22,898,527...22,914,177
JBrowse link
G E2f1 E2F transcription factor 1 IEA KEGG rno:04110 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G E2f3 E2F transcription factor 3 IEA KEGG rno:04110 NCBI chr17:36,334,136...36,408,831
Ensembl chr17:36,334,147...36,408,831
JBrowse link
G E2f5 E2F transcription factor 5 IEA KEGG rno:04110 NCBI chr 2:88,350,764...88,366,913
Ensembl chr 2:88,351,361...88,366,115
JBrowse link
G Ep300 E1A binding protein p300 IEA KEGG rno:04110 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Espl1 extra spindle pole bodies like 1, separase IEA KEGG rno:04110 NCBI chr 7:143,896,890...143,923,868
Ensembl chr 7:143,897,014...143,923,868
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 IEA KEGG rno:04110 NCBI chr 7:11,201,690...11,213,614
Ensembl chr 7:11,201,690...11,213,613
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha IEA KEGG rno:04110 NCBI chr 4:97,782,512...97,784,814
Ensembl chr 4:97,782,512...97,784,842
JBrowse link
G Gadd45b growth arrest and DNA-damage-inducible, beta IEA KEGG rno:04110 NCBI chr 7:11,646,283...11,648,338
Ensembl chr 7:11,646,269...11,648,322
JBrowse link
G Gadd45g growth arrest and DNA-damage-inducible, gamma IEA KEGG rno:04110 NCBI chr17:13,391,474...13,393,219
Ensembl chr17:13,391,467...13,393,243
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IEA KEGG rno:04110 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hdac1 histone deacetylase 1 IEA KEGG rno:04110 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac1l histone deacetylase 1-like IEA KEGG rno:04110 NCBI chr 9:84,893,145...84,894,599
Ensembl chr 9:84,893,145...84,894,599
JBrowse link
G Hdac2 histone deacetylase 2 IEA KEGG rno:04110 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 IEA KEGG rno:04110 NCBI chr12:16,410,083...16,721,232
Ensembl chr12:16,410,083...16,719,824
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 IEA KEGG rno:04110 NCBI chr 4:97,530,993...97,543,179
Ensembl chr 4:97,531,083...97,537,086
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 IEA KEGG rno:04110 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 IEA KEGG rno:04110 NCBI chr 4:120,825,699...120,840,221
Ensembl chr 4:120,825,699...120,840,111
JBrowse link
G Mcm3 minichromosome maintenance complex component 3 IEA KEGG rno:04110 NCBI chr 9:26,914,057...26,932,201
Ensembl chr 9:26,914,057...26,932,201
JBrowse link
G Mcm4 minichromosome maintenance complex component 4 IEA KEGG rno:04110 NCBI chr11:89,511,191...89,524,892
Ensembl chr11:89,511,191...89,524,892
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 IEA KEGG rno:04110 NCBI chr19:14,523,482...14,561,281
Ensembl chr19:14,523,554...14,561,278
JBrowse link
G Mcm6 minichromosome maintenance complex component 6 IEA KEGG rno:04110 NCBI chr13:45,042,882...45,068,073
Ensembl chr13:45,042,882...45,068,077
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 IEA KEGG rno:04110 NCBI chr12:19,306,615...19,313,877
Ensembl chr12:19,306,607...19,314,016
JBrowse link
G Mdm2 MDM2 proto-oncogene IEA KEGG rno:04110 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEA KEGG rno:04110 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Pcna proliferating cell nuclear antigen IEA KEGG rno:04110 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Pkmyt1 protein kinase, membrane associated tyrosine/threonine 1 IEA KEGG rno:04110 NCBI chr10:13,061,077...13,072,277
Ensembl chr10:13,061,170...13,073,283
JBrowse link
G Plk1 polo-like kinase 1 IEA KEGG rno:04110 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
G Pttg1 PTTG1 regulator of sister chromatid separation, securin IEA KEGG rno:04110 NCBI chr10:29,014,332...29,026,088
Ensembl chr10:29,020,049...29,026,002
JBrowse link
G Rad21 RAD21 cohesin complex component IEA KEGG rno:04110 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rb1 RB transcriptional corepressor 1 IEA KEGG rno:04110 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 IEA KEGG rno:04110 NCBI chr 3:153,263,692...153,321,351
Ensembl chr 3:153,263,692...153,321,352
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 IEA KEGG rno:04110 NCBI chr19:17,300,088...17,346,865
Ensembl chr19:17,300,089...17,346,808
JBrowse link
G Rbx1 ring-box 1 IEA KEGG rno:04110 NCBI chr 7:122,700,849...122,710,907
Ensembl chr 7:122,700,854...122,709,935
JBrowse link
G Sfn stratifin IEA KEGG rno:04110 NCBI chr 5:151,823,422...151,824,937
Ensembl chr 5:151,823,887...151,824,633
JBrowse link
G Skp1 S-phase kinase-associated protein 1 IEA KEGG rno:04110 NCBI chr10:37,594,578...37,609,498
Ensembl chr10:37,594,578...37,609,498
JBrowse link
G Skp2 S-phase kinase associated protein 2 IEA KEGG rno:04110 NCBI chr 2:58,506,146...58,534,211
Ensembl chr 2:58,506,151...58,534,211
JBrowse link
G Smad2 SMAD family member 2 IEA KEGG rno:04110 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad3 SMAD family member 3 IEA KEGG rno:04110 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smad4 SMAD family member 4 IEA KEGG rno:04110 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Smc1a structural maintenance of chromosomes 1A IEA KEGG rno:04110 NCBI chr  X:21,710,976...21,755,708
Ensembl chr  X:21,711,019...21,755,525
JBrowse link
G Smc1b structural maintenance of chromosomes 1B IEA KEGG rno:04110 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA KEGG rno:04110 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag1 stromal antigen 1 IEA KEGG rno:04110 NCBI chr 8:108,958,099...109,342,738
Ensembl chr 8:108,958,046...109,342,738
JBrowse link
G Stag2 stromal antigen 2 IEA KEGG rno:04110 NCBI chr  X:128,493,603...128,624,418
Ensembl chr  X:128,493,614...128,624,418
JBrowse link
G Tfdp1 transcription factor Dp-1 IEA KEGG rno:04110 NCBI chr16:81,088,642...81,127,244
Ensembl chr16:81,089,292...81,127,257
JBrowse link
G Tfdp2 transcription factor Dp-2 IEA KEGG rno:04110 NCBI chr 8:104,040,795...104,181,228
Ensembl chr 8:104,040,934...104,176,446
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEA KEGG rno:04110 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEA KEGG rno:04110 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 IEA KEGG rno:04110 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tp53 tumor protein p53 IEA KEGG rno:04110 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Ttk Ttk protein kinase IEA KEGG rno:04110 NCBI chr 8:91,368,065...91,405,995
Ensembl chr 8:91,368,111...91,405,993
JBrowse link
G Wee1 WEE1 G2 checkpoint kinase IEA KEGG rno:04110 NCBI chr 1:174,765,228...174,790,882
Ensembl chr 1:174,767,960...174,786,361
JBrowse link
G Wee2 WEE2 oocyte meiosis inhibiting kinase IEA KEGG rno:04110 NCBI chr 4:68,604,770...68,631,341
Ensembl chr 4:68,608,137...68,629,925
JBrowse link
G Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta IEA KEGG rno:04110 NCBI chr 3:160,391,108...160,399,931
Ensembl chr 3:160,391,106...160,399,931
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon IEA KEGG rno:04110 NCBI chr10:63,884,338...63,921,709
Ensembl chr10:63,884,338...63,921,709
JBrowse link
G Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma IEA KEGG rno:04110 NCBI chr12:23,789,547...23,817,884
Ensembl chr12:23,789,638...23,817,883
JBrowse link
G Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta IEA KEGG rno:04110 NCBI chr14:83,053,041...83,062,424
Ensembl chr14:83,053,041...83,062,424
JBrowse link
G Ywhaq tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta IEA KEGG rno:04110 NCBI chr 6:43,463,294...43,493,816
Ensembl chr 6:43,463,294...43,493,816
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta IEA KEGG rno:04110 NCBI chr 7:75,573,553...75,598,295
Ensembl chr 7:75,574,967...75,597,276
JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 IEA KEGG rno:04110 NCBI chr 5:159,993,799...160,014,899
Ensembl chr 5:159,993,799...160,014,895
JBrowse link
CHD family mediated chromatin remodeling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd3 chromodomain helicase DNA binding protein 3 ISO RGD PMID:24880148 RGD:9585661 NCBI chr10:55,943,467...55,970,417
Ensembl chr10:55,943,446...55,965,216
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 ISO RGD PMID:24880148 RGD:9585661 NCBI chr 4:157,612,531...157,645,660
Ensembl chr 4:157,612,536...157,645,659
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 ISO RGD PMID:24880148 RGD:9585661 NCBI chr 5:169,519,212...169,572,059
Ensembl chr 5:169,519,212...169,567,107
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A ISO RGD PMID:24880148 RGD:9585661 NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B ISO RGD PMID:24880148 RGD:9585661 NCBI chr 2:189,654,871...189,735,056
Ensembl chr 2:189,655,702...189,733,540
JBrowse link
G Hdac1 histone deacetylase 1 ISO RGD PMID:24880148 RGD:9585661 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:24880148 RGD:9585661 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO RGD PMID:24880148 RGD:9585661 NCBI chr18:65,814,026...65,885,115
Ensembl chr18:65,814,026...65,885,114
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 ISO RGD PMID:24880148 RGD:9585661 NCBI chr 7:12,179,046...12,186,251
Ensembl chr 7:12,179,203...12,186,656
JBrowse link
G Mta1 metastasis associated 1 ISO RGD PMID:24880148 RGD:9585661 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Mta2 metastasis associated 1 family, member 2 ISO RGD PMID:24880148 RGD:9585661 NCBI chr 1:225,140,863...225,149,584
Ensembl chr 1:225,140,863...225,149,583
JBrowse link
G Mta3 metastasis associated 1 family, member 3 ISO RGD PMID:24880148 RGD:9585661 NCBI chr 6:6,904,449...7,036,929
Ensembl chr 6:6,908,684...7,031,828
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO RGD PMID:24880148 RGD:9585661 NCBI chr 5:147,499,880...147,535,240
Ensembl chr 5:147,499,882...147,535,240
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor ISO RGD PMID:24880148 RGD:9585661 NCBI chr  X:33,648,682...33,665,821
Ensembl chr  X:33,648,682...33,665,821
JBrowse link
cortisol signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crebbp CREB binding protein ISO RGD PMID:11306337 RGD:5147892 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:16610357 RGD:5144125 NCBI chr19:22,569,999...22,588,143
Ensembl chr19:22,569,999...22,588,137
JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:11306337 RGD:5147892 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 4:161,748,993...161,757,447
Ensembl chr 4:161,748,993...161,757,447
JBrowse link
G Fkbp5 FKBP prolyl isomerase 5 ISO RGD PMID:16610357 RGD:5144125 NCBI chr20:7,976,704...8,097,290
Ensembl chr20:7,976,713...8,019,020
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 ISO RGD PMID:16610357 RGD:5144125 NCBI chr10:38,601,624...38,642,397
Ensembl chr10:38,601,624...38,642,397
JBrowse link
G Kat2b lysine acetyltransferase 2B ISO RGD PMID:11306337 RGD:5147892 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Med1 mediator complex subunit 1 TAS
ISO
RGD PMID:11306337, PMID:11306337 RGD:5147892, RGD:5147892 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Med14 mediator complex subunit 14 ISO RGD PMID:11306337 RGD:5147892 NCBI chr  X:10,964,035...11,082,403
Ensembl chr  X:10,963,809...11,082,565
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:19818358, PMID:11306337 RGD:5144138, RGD:5147892 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:19818358, PMID:11306337 RGD:5144138, RGD:5147892 NCBI chr 5:5,466,544...5,696,540
Ensembl chr 5:5,616,483...5,694,598
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO RGD PMID:19818358, PMID:11306337 RGD:5144138, RGD:5147892 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO RGD PMID:20801081 RGD:5147413 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO RGD PMID:20801081 RGD:5147413 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:11306337 RGD:5147892 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Stip1 stress-induced phosphoprotein 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 1:222,274,133...222,293,139
Ensembl chr 1:222,274,133...222,293,148
JBrowse link
CRM1 export pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32a acidic nuclear phosphoprotein 32 family member A ISO RGD PMID:23583578 RGD:9743967 NCBI chr 8:67,295,578...67,333,075
Ensembl chr 8:67,295,727...67,333,247
JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B ISO RGD PMID:23583578 RGD:9743967 NCBI chr 5:62,070,709...62,094,633
Ensembl chr 5:62,071,346...62,094,633
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E ISO RGD PMID:23583578 RGD:9743967 NCBI chr 2:243,819,616...243,853,987
Ensembl chr 2:243,820,661...243,852,631
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Lrpprc leucine-rich pentatricopeptide repeat containing ISO RGD PMID:23583578 RGD:9743967 NCBI chr 6:7,984,043...8,066,874
Ensembl chr 6:7,984,019...8,066,868
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor ISO RGD PMID:23583578 RGD:9743967 NCBI chr 1:167,213,866...167,308,851
Ensembl chr 1:167,213,866...167,308,851
JBrowse link
G Nxf3 nuclear RNA export factor 3 ISO RGD PMID:23583578 RGD:9743967 NCBI chr  X:106,562,957...106,587,487
Ensembl chr  X:106,563,984...106,576,314
JBrowse link
G Ran RAN, member RAS oncogene family ISO RGD PMID:23583578 RGD:9743967 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Ranbp1 RAN binding protein 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr11:86,890,585...86,898,818
Ensembl chr11:86,890,585...86,898,818
JBrowse link
G Ranbp2 RAN binding protein 2 ISO RGD PMID:23583578 RGD:9743967 NCBI chr20:28,027,054...28,076,664
NCBI chr20:28,365,538...28,375,676
Ensembl chr20:28,027,054...28,076,664
Ensembl chr20:28,027,054...28,076,664
JBrowse link
G Rangap1 RAN GTPase activating protein 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 7:122,939,266...122,967,178
Ensembl chr 7:122,940,376...122,967,178
JBrowse link
G Xpo1 exportin 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr14:108,007,421...108,049,088
Ensembl chr14:108,007,724...108,049,660
JBrowse link
DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:23697932 RGD:9479164 NCBI chr18:70,192,520...70,197,871
Ensembl chr18:70,192,493...70,197,867
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:22770212, PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 8:21,922,515...21,968,495
Ensembl chr 8:21,922,515...21,968,495
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:22770212, PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:22770212, PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Ebf1 EBF transcription factor 1 ISO RGD PMID:24825349 RGD:8695944 NCBI chr10:23,654,849...24,051,627
Ensembl chr10:23,661,013...24,050,209
JBrowse link
G Kdm2a lysine demethylase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr 1:219,566,130...219,642,294
Ensembl chr 1:219,566,156...219,640,294
JBrowse link
G Kdm2b lysine demethylase 2B ISO RGD PMID:23697932 RGD:9479164 NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971
JBrowse link
G Kmt2c lysine methyltransferase 2C ISO RGD PMID:23697932 RGD:9479164 NCBI chr 4:82,506...109,986
NCBI chr 4:6,083,650...6,294,413
Ensembl chr 4:6,083,736...6,292,516
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr18:70,248,568...70,263,190
Ensembl chr18:70,248,713...70,263,164
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr18:65,814,026...65,885,115
Ensembl chr18:65,814,026...65,885,114
JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase ISO RGD PMID:23324617 RGD:8695954 NCBI chr 4:147,744,673...147,756,462
Ensembl chr 4:147,746,186...147,756,294
JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Nanog Nanog homeobox ISO RGD PMID:24825349 RGD:8695944 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:24825349 RGD:8695944 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO RGD PMID:24825349 RGD:8695944 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Prdm14 PR/SET domain 14 ISO RGD PMID:24825349 RGD:8695944 NCBI chr 5:5,710,076...5,730,560
Ensembl chr 5:5,710,392...5,730,560
JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO RGD PMID:24825349 RGD:8695944 NCBI chr 8:61,748,590...61,803,314
Ensembl chr 8:61,762,768...61,803,099
JBrowse link
G Spi1 Spi-1 proto-oncogene ISO RGD PMID:24825349 RGD:8695944 NCBI chr 3:79,918,127...79,937,708
Ensembl chr 3:79,918,969...79,938,301
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 ISO RGD PMID:22770212, PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr20:27,359,122...27,438,039
Ensembl chr20:27,366,213...27,437,427
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO RGD PMID:22770212, PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 2:238,719,389...238,802,975
Ensembl chr 2:238,720,835...238,803,024
JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 ISO RGD PMID:22770212, PMID:23697932, PMID:24825349 RGD:8695943, RGD:9479164, RGD:8695944 NCBI chr 4:115,060,702...115,160,800
Ensembl chr 4:115,066,309...115,157,263
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 9:10,738,211...10,758,403
Ensembl chr 9:10,738,222...10,757,954
JBrowse link
G Uhrf2 ubiquitin like with PHD and ring finger domains 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 1:248,228,496...248,291,984
Ensembl chr 1:248,228,496...248,291,978
JBrowse link
G Zbtb33 zinc finger and BTB domain containing 33 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:124,319,299...124,326,506
Ensembl chr  X:124,321,551...124,323,960
Ensembl chr  X:124,321,551...124,323,960
JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 8:104,566,999...104,694,890
Ensembl chr 8:104,589,621...104,593,625
JBrowse link
G Zbtb4 zinc finger and BTB domain containing 4 ISO RGD PMID:23324617 RGD:8695954 NCBI chr10:56,367,586...56,388,296
Ensembl chr10:56,381,813...56,385,960
JBrowse link
G Zfp57 zinc finger protein 57 ISO RGD PMID:23324617 RGD:8695954 NCBI chr20:2,014,177...2,020,488
Ensembl chr20:2,014,170...2,020,537
JBrowse link
DNA replication pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase ISO RGD PMID:10825162 RGD:1580057 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 IEA KEGG rno:03030
G Fen1 flap structure-specific endonuclease 1 IEA KEGG rno:03030 NCBI chr 1:226,251,516...226,256,160
Ensembl chr 1:226,251,518...226,255,886
JBrowse link
G Lig1 DNA ligase 1 IEA KEGG rno:03030 NCBI chr 1:75,356,212...75,394,757
Ensembl chr 1:75,356,220...75,394,758
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 IEA KEGG rno:03030 NCBI chr 4:120,825,699...120,840,221
Ensembl chr 4:120,825,699...120,840,111
JBrowse link
G Mcm3 minichromosome maintenance complex component 3 IEA KEGG rno:03030 NCBI chr 9:26,914,057...26,932,201
Ensembl chr 9:26,914,057...26,932,201
JBrowse link
G Mcm4 minichromosome maintenance complex component 4 IEA KEGG rno:03030 NCBI chr11:89,511,191...89,524,892
Ensembl chr11:89,511,191...89,524,892
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 IEA KEGG rno:03030 NCBI chr19:14,523,482...14,561,281
Ensembl chr19:14,523,554...14,561,278
JBrowse link
G Mcm6 minichromosome maintenance complex component 6 IEA KEGG rno:03030 NCBI chr13:45,042,882...45,068,073
Ensembl chr13:45,042,882...45,068,077
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 IEA KEGG rno:03030 NCBI chr12:19,306,615...19,313,877
Ensembl chr12:19,306,607...19,314,016
JBrowse link
G Pcna proliferating cell nuclear antigen IEA KEGG rno:03030 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit IEA KEGG rno:03030 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit IEA KEGG rno:03030 NCBI chr 1:221,297,417...221,321,601
Ensembl chr 1:221,273,538...221,321,570
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit IEA KEGG rno:03030 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit IEA KEGG rno:03030 NCBI chr14:86,111,416...86,117,578
Ensembl chr14:86,111,294...86,117,578
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit IEA KEGG rno:03030 NCBI chr 1:165,085,142...165,122,385
Ensembl chr 1:165,083,622...165,123,455
JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit IEA KEGG rno:03030 NCBI chr 1:219,480,841...219,483,244
Ensembl chr 1:219,481,575...219,483,241
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit IEA KEGG rno:03030 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Pole2 DNA polymerase epsilon 2, accessory subunit IEA KEGG rno:03030 NCBI chr 6:91,494,348...91,532,355
Ensembl chr 6:91,494,393...91,518,996
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit IEA KEGG rno:03030 NCBI chr 5:78,380,813...78,384,047
Ensembl chr 5:78,380,816...78,384,047
JBrowse link
G Pole4 DNA polymerase epsilon 4, accessory subunit IEA KEGG rno:03030 NCBI chr 4:113,491,644...113,497,455
Ensembl chr 4:113,491,644...113,497,455
JBrowse link
G Prim1 DNA primase subunit 1 IEA KEGG rno:03030 NCBI chr 7:2,435,524...2,451,169
Ensembl chr 7:2,435,553...2,451,165
JBrowse link
G Prim2 DNA primase subunit 2 IEA KEGG rno:03030 NCBI chr 9:38,535,435...38,745,058
Ensembl chr 9:38,536,920...38,745,099
JBrowse link
G Rfc1 replication factor C subunit 1 IEA KEGG rno:03030 NCBI chr14:44,627,528...44,702,205
Ensembl chr14:44,580,216...44,702,203
JBrowse link
G Rfc2 replication factor C subunit 2 IEA KEGG rno:03030 NCBI chr12:25,130,375...25,143,480
Ensembl chr12:25,130,377...25,143,480
JBrowse link
G Rfc3 replication factor C subunit 3 IEA KEGG rno:03030 NCBI chr12:1,460,581...1,471,344
Ensembl chr12:1,460,538...1,471,357
JBrowse link
G Rfc4 replication factor C subunit 4 IEA KEGG rno:03030 NCBI chr11:81,358,592...81,373,044
Ensembl chr11:81,358,592...81,373,043
JBrowse link
G Rfc5 replication factor C subunit 5 IEA KEGG rno:03030 NCBI chr12:44,931,494...44,941,051
Ensembl chr12:44,931,494...44,941,324
JBrowse link
G Rnaseh1 ribonuclease H1 IEA KEGG rno:03030 NCBI chr 6:47,916,188...47,925,582
Ensembl chr 6:47,916,188...47,925,571
JBrowse link
G Rnaseh2a ribonuclease H2, subunit A IEA KEGG rno:03030 NCBI chr19:26,074,980...26,084,780
Ensembl chr19:26,074,987...26,084,679
JBrowse link
G Rnaseh2b ribonuclease H2, subunit B IEA KEGG rno:03030 NCBI chr15:45,422,010...45,472,792
Ensembl chr15:45,422,010...45,464,892
JBrowse link
G Rpa1 replication protein A1 IEA KEGG rno:03030 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Rpa2 replication protein A2 IEA KEGG rno:03030 NCBI chr 5:150,957,041...150,967,597
Ensembl chr 5:150,957,001...150,968,269
JBrowse link
G Rpa3 replication protein A3 IEA KEGG rno:03030 NCBI chr 4:34,279,320...34,282,351
Ensembl chr 4:34,279,320...34,282,351
JBrowse link
G Ssbp1 single stranded DNA binding protein 1 IEA KEGG rno:03030 NCBI chr 4:68,634,844...68,645,112
Ensembl chr 4:68,634,929...68,645,172
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO RGD PMID:11721054 RGD:1580482 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
estrogen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascc1 activating signal cointegrator 1 complex subunit 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr20:29,558,330...29,648,899
Ensembl chr20:29,558,689...29,648,893
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 7:144,307,562...144,322,253
Ensembl chr 7:144,307,509...144,322,240
Ensembl chr 7:144,307,509...144,322,240
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:16394250 RGD:5128512 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO RGD PMID:16394250 RGD:5128512 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:18451092 RGD:4892102 NCBI chr19:22,569,999...22,588,143
Ensembl chr19:22,569,999...22,588,137
JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Esr1 estrogen receptor 1 ISO
IDA
RGD PMID:16651458, PMID:17928626, PMID:19274700 RGD:1580338, RGD:5128669, RGD:4892064 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Esr2 estrogen receptor 2 IDA
ISO
RGD PMID:15564578, PMID:17928626, PMID:19274700 RGD:1582269, RGD:5128669, RGD:4892064 NCBI chr 6:99,163,953...99,214,711
Ensembl chr 6:99,164,357...99,214,251
JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 ISO RGD PMID:18451092 RGD:4892102 NCBI chr 4:161,748,993...161,757,447
Ensembl chr 4:161,748,993...161,757,447
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 ISO
IMP
IDA
RGD PMID:19274700, PMID:20445128, PMID:19767412, PMID:20445128 RGD:4892064, RGD:4892084, RGD:5128698, RGD:4892084 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:18451092 RGD:4892102 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:18451092 RGD:4892102 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 ISO RGD PMID:18451092 RGD:4892102 NCBI chr10:38,601,624...38,642,397
Ensembl chr10:38,601,624...38,642,397
JBrowse link
G Med1 mediator complex subunit 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 5:5,466,544...5,696,540
Ensembl chr 5:5,616,483...5,694,598
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 3:150,919,317...150,990,391
Ensembl chr 3:150,919,317...150,960,030
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr11:14,658,225...14,742,478
Ensembl chr11:14,658,225...14,741,563
JBrowse link
G Phb2 prohibitin 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Ppid peptidylprolyl isomerase D ISO RGD PMID:18451092 RGD:4892102 NCBI chr 2:178,354,830...178,366,843
Ensembl chr 2:178,354,890...178,366,685
JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 1:100,971,132...100,980,411
Ensembl chr 1:100,971,273...100,980,340
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO RGD PMID:18451092 RGD:4892102 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 2:148,874,151...148,891,900
Ensembl chr 2:148,874,151...148,891,900
JBrowse link
G Sra1 steroid receptor RNA activator 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr18:29,494,004...29,497,232
Ensembl chr18:29,494,014...29,497,410
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IMP RGD PMID:17928626, PMID:20445128 RGD:5128669, RGD:4892084 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stip1 stress-induced phosphoprotein 1 ISO RGD PMID:18451092 RGD:4892102 NCBI chr 1:222,274,133...222,293,139
Ensembl chr 1:222,274,133...222,293,148
JBrowse link
forkhead class A signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO PID PID:200087 NCBI chr 1:102,110,708...102,191,287
Ensembl chr 1:102,110,708...102,191,287
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain ISO PID PID:200087 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain ISO PID PID:200087 NCBI chr10:56,619,321...56,624,468
Ensembl chr10:56,619,303...56,624,526
JBrowse link
G Afp alpha-fetoprotein ISO PID PID:200087 NCBI chr14:19,141,755...19,159,919
Ensembl chr14:19,141,755...19,159,923
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO PID PID:200087 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Alas1 5'-aminolevulinate synthase 1 ISO PID PID:200087 NCBI chr 8:114,927,704...114,941,038
Ensembl chr 8:114,927,722...114,940,177
JBrowse link
G Alb albumin ISO PID PID:200087 NCBI chr14:19,176,275...19,191,793
Ensembl chr14:19,176,277...19,191,863
JBrowse link
G Aldob aldolase, fructose-bisphosphate B ISO PID PID:200087 NCBI chr 5:64,805,772...64,818,813
Ensembl chr 5:64,805,773...64,818,824
JBrowse link
G Ap1b1 adaptor related protein complex 1 subunit beta 1 ISO PID PID:200226 NCBI chr14:85,230,652...85,281,806
Ensembl chr14:85,230,648...85,281,803
JBrowse link
G Apoa1 apolipoprotein A1 ISO PID PID:200087 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apob apolipoprotein B ISO PID PID:200226 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Ar androgen receptor ISO PID PID:200226 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 ISO PID PID:200226 NCBI chr11:24,286,806...24,294,419
Ensembl chr11:24,286,787...24,294,179
JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 ISO PID PID:200087 NCBI chr11:72,577,547...72,619,435
Ensembl chr11:72,578,533...72,614,176
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO PID PID:200226 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G C4bpb complement component 4 binding protein, beta ISO PID PID:200226 NCBI chr13:47,387,173...47,398,115
Ensembl chr13:47,387,173...47,397,890
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B ISO PID PID:200226 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha ISO PID PID:200087 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO PID PID:200087 PID:200226 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta ISO PID PID:200087 NCBI chr11:89,008,008...89,009,146
Ensembl chr11:89,008,008...89,009,146
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain ISO PID PID:200226 NCBI chr20:12,225,202...12,332,858
Ensembl chr20:12,225,202...12,332,858
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO PID PID:200087 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Cpt1b carnitine palmitoyltransferase 1B ISO PID PID:200087 NCBI chr 7:130,395,211...130,404,731
Ensembl chr 7:130,395,194...130,405,347
JBrowse link
G Cpt1c carnitine palmitoyltransferase 1c ISO PID PID:200087 NCBI chr 1:100,955,094...100,970,579
Ensembl chr 1:100,955,095...100,969,560
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO PID PID:200087 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Crebbp CREB binding protein ISO PID PID:200226 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Cyp2c24 cytochrome P450, family 2, subfamily c, polypeptide 24 ISO PID PID:200226 NCBI chr 1:258,074,797...258,139,176
Ensembl chr 1:258,074,860...258,139,176
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO PID PID:200087 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Dscam DS cell adhesion molecule ISO PID PID:200226 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776
JBrowse link
G Ep300 E1A binding protein p300 ISO PID PID:200226 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Esr1 estrogen receptor 1 ISO PID PID:200226 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G F2 coagulation factor II ISO PID PID:200087 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO PID PID:200226 NCBI chr 6:109,300,433...109,303,299
Ensembl chr 6:109,300,433...109,303,299
JBrowse link
G Foxa1 forkhead box A1 ISO PID PID:200087 PID:200226 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 ISO PID PID:200087 PID:200226 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Foxa3 forkhead box A3 ISO PID PID:200087 PID:200226 NCBI chr 1:79,921,292...79,930,219
Ensembl chr 1:79,920,752...79,930,263
JBrowse link
G Foxf1 forkhead box F1 ISO PID PID:200087 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 ISO PID PID:200087 NCBI chr10:89,286,009...89,296,213
Ensembl chr10:89,285,855...89,296,213
JBrowse link
G Gcg glucagon ISO PID PID:200226 NCBI chr 3:48,442,635...48,451,650
Ensembl chr 3:48,442,635...48,451,650
JBrowse link
G Gck glucokinase ISO PID PID:200087 NCBI chr14:86,149,146...86,191,589
Ensembl chr14:86,148,928...86,190,659
JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase ISO PID PID:200087 NCBI chr 2:236,353,445...236,395,067
Ensembl chr 2:236,353,445...236,395,067
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO PID PID:200087 NCBI chr 2:52,427,351...52,445,082
Ensembl chr 2:52,431,601...52,445,055
JBrowse link
G Hnf1a HNF1 homeobox A ISO PID PID:200087 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hnf1b HNF1 homeobox B ISO PID PID:200087 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha ISO PID PID:200087 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Igfbp1 insulin-like growth factor binding protein 1 ISO PID PID:200087 NCBI chr14:87,448,716...87,453,783
Ensembl chr14:87,448,692...87,453,785
JBrowse link
G Ins2 insulin 2 ISO PID PID:200087 PID:200226 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO PID PID:200226 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO PID PID:200087 NCBI chr 1:102,103,093...102,107,134
Ensembl chr 1:102,103,094...102,106,127
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO PID PID:200226 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 ISO PID PID:200226 NCBI chr20:10,265,826...10,275,298
Ensembl chr20:10,265,806...10,275,304
JBrowse link
G Nf1 neurofibromin 1 ISO PID PID:200087 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nfia nuclear factor I/A ISO PID PID:200226 NCBI chr 5:116,421,895...116,750,381
Ensembl chr 5:116,420,690...116,751,416
JBrowse link
G Nfib nuclear factor I/B ISO PID PID:200226 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Nfic nuclear factor I/C ISO PID PID:200226 NCBI chr 7:11,151,941...11,179,544
Ensembl chr 7:11,152,038...11,177,664
JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO PID PID:200087 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO PID PID:200226 NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 ISO PID PID:200226 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 ISO PID PID:200087 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO PID PID:200226 NCBI chr11:14,658,225...14,742,478
Ensembl chr11:14,658,225...14,741,563
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO PID PID:200087 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO PID PID:200087 NCBI chr12:9,496,044...9,501,211
Ensembl chr12:9,496,044...9,501,213
JBrowse link
G Pisd phosphatidylserine decarboxylase ISO PID PID:200226 NCBI chr14:83,298,630...83,347,697
Ensembl chr14:83,298,674...83,346,738
JBrowse link
G Pklr pyruvate kinase L/R ISO PID PID:200087 NCBI chr 2:188,449,158...188,458,034
Ensembl chr 2:188,449,210...188,459,592
JBrowse link
G Pou2f1 POU class 2 homeobox 1 ISO PID PID:200226 NCBI chr13:84,075,316...84,217,368
Ensembl chr13:84,083,632...84,217,366
JBrowse link
G Prdm15 PR/SET domain 15 ISO PID PID:200226 NCBI chr11:38,294,040...38,354,648
Ensembl chr11:38,293,875...38,351,184
JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 ISO PID PID:200226 NCBI chr 1:225,279,698...225,283,246
Ensembl chr 1:225,279,676...225,283,326
JBrowse link
G Serpina1 serpin family A member 1 ISO PID PID:200226 NCBI chr 6:127,610,241...127,632,265
Ensembl chr 6:127,610,243...127,632,265
JBrowse link
G Sftpa1 surfactant protein A1 ISO PID PID:200226 NCBI chr16:18,716,019...18,719,404
Ensembl chr16:18,716,019...18,719,403
JBrowse link
G Sftpd surfactant protein D ISO PID PID:200226 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Shh sonic hedgehog signaling molecule ISO PID PID:200226 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Slc2a2 solute carrier family 2 member 2 ISO PID PID:200087 NCBI chr 2:114,413,427...114,445,418
Ensembl chr 2:114,413,410...114,445,395
JBrowse link
G Sod1 superoxide dismutase 1 ISO PID PID:200226 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Sp1 Sp1 transcription factor ISO PID PID:200087 PID:200226 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Tat tyrosine aminotransferase ISO PID PID:200087 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
G Tff1 trefoil factor 1 ISO PID PID:200226 NCBI chr20:9,892,124...9,895,984
Ensembl chr20:9,892,124...9,895,984
JBrowse link
G Tfrc transferrin receptor ISO PID PID:200087 NCBI chr11:71,397,423...71,419,263
Ensembl chr11:71,397,383...71,419,223
JBrowse link
G Ttr transthyretin ISO PID PID:200087 NCBI chr18:15,532,963...15,542,180
Ensembl chr18:15,532,963...15,540,177
JBrowse link
G Ucp2 uncoupling protein 2 ISO PID PID:200087 NCBI chr 1:165,506,375...165,512,744
Ensembl chr 1:165,506,361...165,512,744
JBrowse link
G Vtn vitronectin ISO PID PID:200226 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Xbp1 X-box binding protein 1 ISO PID PID:200226 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G1 phase pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd1 cyclin D1 IEA RGD PMID: RGD:1358139 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cdk4 cyclin-dependent kinase 4 IEA RGD PMID: RGD:1358139 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G E2f5 E2F transcription factor 5 IEA RGD PMID: RGD:1358139 NCBI chr 2:88,350,764...88,366,913
Ensembl chr 2:88,351,361...88,366,115
JBrowse link
G1/S DNA damage checkpoint pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccne1 cyclin E1 IEA RGD PMID: RGD:1358139 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G1/S transition pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccna1 cyclin A1 ISO RGD PMID:10919634, PMID:16236519 RGD:8694143, RGD:8694150 NCBI chr 2:144,456,689...144,503,570
Ensembl chr 2:144,458,153...144,467,912
JBrowse link
G Ccna2 cyclin A2 ISO RGD PMID:10919634, PMID:16236519 RGD:8694143, RGD:8694150 NCBI chr 2:123,274,727...123,282,266
Ensembl chr 2:123,275,881...123,282,214
JBrowse link
G Ccnb1 cyclin B1 IEA RGD PMID: RGD:1358139 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ccnd1 cyclin D1 ISO RGD PMID:10919634 RGD:8694143 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Ccnd2 cyclin D2 ISO RGD PMID:10919634 RGD:8694143 NCBI chr 4:159,674,885...159,697,207
Ensembl chr 4:159,674,885...159,697,207
JBrowse link
G Ccnd3 cyclin D3 ISO RGD PMID:10919634 RGD:8694143 NCBI chr 9:15,404,816...15,410,905
Ensembl chr 9:15,404,822...15,410,943
JBrowse link
G Ccne1 cyclin E1 IEA
ISO
RGD PMID:, PMID:16236519, PMID:10919634 RGD:1358139, RGD:8694150, RGD:8694143 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Ccne2 cyclin E2 ISO RGD PMID:10919634, PMID:16236519 RGD:8694143, RGD:8694150 NCBI chr 5:24,434,077...24,446,406
Ensembl chr 5:24,434,872...24,446,406
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEA RGD PMID: RGD:1358139 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:10919634, PMID:16236519 RGD:8694143, RGD:8694150 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk4 cyclin-dependent kinase 4 ISO RGD PMID:10919634, PMID:16236519 RGD:8694143, RGD:8694150 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cdk6 cyclin-dependent kinase 6 ISO RGD PMID:10919634, PMID:16236519 RGD:8694143, RGD:8694150 NCBI chr 4:27,781,728...27,969,653
Ensembl chr 4:27,785,647...27,966,398
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO RGD PMID:10919634 RGD:8694143 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B ISO RGD PMID:10919634 RGD:8694143 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C ISO RGD PMID:10919634 RGD:8694143 NCBI chr 1:216,661,067...216,663,791
Ensembl chr 1:216,661,080...216,663,721
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO RGD PMID:10919634 RGD:8694143 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B ISO RGD PMID:10919634 RGD:8694143 NCBI chr 5:107,834,353...107,857,428
Ensembl chr 5:107,845,951...107,858,104
JBrowse link
G Cdkn2c cyclin-dependent kinase inhibitor 2C ISO RGD PMID:10919634 RGD:8694143 NCBI chr 5:129,347,731...129,352,886
Ensembl chr 5:129,347,732...129,352,886
JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D ISO RGD PMID:10919634 RGD:8694143
G Rb1 RB transcriptional corepressor 1 ISO RGD PMID:16236519 RGD:8694150 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 ISO RGD PMID:16236519 RGD:8694150 NCBI chr 3:153,263,692...153,321,351
Ensembl chr 3:153,263,692...153,321,352
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 ISO RGD PMID:16236519 RGD:8694150 NCBI chr19:17,300,088...17,346,865
Ensembl chr19:17,300,089...17,346,808
JBrowse link
G2/M checkpoint pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 IEA RGD PMID: RGD:1358139 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEA RGD PMID: RGD:1358139 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G2/M DNA damage checkpoint pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 IEA RGD PMID: RGD:1358139 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEA RGD PMID: RGD:1358139 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Chek1 checkpoint kinase 1 IMP RGD PMID:11278490 RGD:2316109 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO RGD PMID:11721054 RGD:1580482 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G2/M DNA replication checkpoint pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 IEA RGD PMID: RGD:1358139 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEA RGD PMID: RGD:1358139 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G2/M transition pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 IEA RGD PMID: RGD:1358139 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEA RGD PMID: RGD:1358139 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
histone modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp2 AE binding protein 2 ISO RGD PMID:24148750 RGD:9479059 NCBI chr 4:174,799,378...174,863,260
Ensembl chr 4:174,810,959...174,863,260
JBrowse link
G Aplf aprataxin and PNKP like factor ISO RGD PMID:23288364 RGD:9068945 NCBI chr 4:119,514,822...119,568,764
Ensembl chr 4:119,514,840...119,568,736
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chr20:34,894,419...34,909,265
Ensembl chr20:34,894,419...34,909,265
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chr19:25,077,918...25,092,491
Ensembl chr19:25,077,918...25,092,491
JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr 2:188,252,592...188,389,251
Ensembl chr 2:188,253,220...188,389,250
JBrowse link
G Ash2l ASH2 like histone lysine methyltransferase complex subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr16:71,011,315...71,033,171
Ensembl chr16:71,011,332...71,032,790
JBrowse link
G Bap1 Brca1 associated protein 1 ISO RGD PMID:24647359 RGD:9479061 NCBI chr16:7,336,685...7,345,511
Ensembl chr16:7,336,685...7,345,511
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chr10:106,856,097...106,864,419
Ensembl chr10:106,856,097...106,864,413
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO RGD PMID:23473600, PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Bptf bromodomain PHD finger transcription factor ISO RGD PMID:24686119, PMID:23642229 RGD:9479075, RGD:9479074 NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 9:9,863,380...9,865,920
Ensembl chr 9:9,863,404...9,865,920
JBrowse link
G Brd1 bromodomain containing 1 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 7:129,676,119...129,724,303
Ensembl chr 7:129,676,120...129,724,303
JBrowse link
G Brd2 bromodomain containing 2 ISO RGD PMID:24686119 RGD:9479075 NCBI chr20:3,910,555...3,921,074
Ensembl chr20:3,910,555...3,917,426
Ensembl chr20:3,910,555...3,917,426
JBrowse link
G Brd3 bromodomain containing 3 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 3:5,995,204...6,054,467
Ensembl chr 3:5,997,315...6,054,483
JBrowse link
G Brd4 bromodomain containing 4 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055
JBrowse link
G Brd7 bromodomain containing 7 ISO RGD PMID:24686119 RGD:9479075 NCBI chr19:19,672,780...19,701,484
Ensembl chr19:19,672,856...19,701,484
JBrowse link
G Brdt bromodomain testis associated ISO RGD PMID:24686119 RGD:9479075 NCBI chr14:3,437,876...3,462,613
Ensembl chr14:3,405,995...3,462,629
JBrowse link
G Brf1 BRF1, RNA polymerase III transcription initiation factor subunit ISO RGD PMID:23642229 RGD:9479074 NCBI chr 6:137,762,230...137,808,573
Ensembl chr 6:137,765,122...137,808,303
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
JBrowse link
G Cbx2 chromobox 2 ISO RGD PMID:23473600, PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:108,132,105...108,140,935
Ensembl chr10:108,132,105...108,140,935
JBrowse link
G Cbx4 chromobox 4 ISO RGD PMID:23473600, PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:108,190,947...108,196,455
Ensembl chr10:108,190,995...108,196,217
JBrowse link
G Cbx5 chromobox 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 7:144,819,673...144,865,014
Ensembl chr 7:144,819,420...144,837,583
JBrowse link
G Cbx6 chromobox 6 ISO RGD PMID:23473600, PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 7:121,047,996...121,058,109
Ensembl chr 7:121,050,302...121,058,029
JBrowse link
G Cbx7 chromobox 7 ISO RGD PMID:23473600, PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 7:121,136,067...121,153,503
Ensembl chr 7:121,136,058...121,153,383
JBrowse link
G Cbx8 chromobox 8 ISO RGD PMID:23473600, PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:108,148,073...108,150,511
Ensembl chr10:108,148,073...108,150,511
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A ISO RGD PMID:23288364 RGD:9068945 NCBI chr 9:11,000,869...11,027,631
Ensembl chr 9:11,001,129...11,027,506
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B ISO RGD PMID:23288364 RGD:9068945 NCBI chr11:34,101,248...34,121,371
Ensembl chr11:34,101,197...34,121,378
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485
JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:21151613, PMID:24686119 RGD:9104959, RGD:9479075 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr18:70,192,520...70,197,871
Ensembl chr18:70,192,493...70,197,867
JBrowse link
G Daxx death-domain associated protein ISO RGD PMID:23288364 RGD:9068945 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr 7:11,786,105...11,824,742
Ensembl chr 7:11,786,105...11,824,742
JBrowse link
G Dpf3 double PHD fingers 3 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 6:106,660,569...106,971,310
Ensembl chr 6:106,721,349...106,971,250
JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr 6:22,296,128...22,316,894
Ensembl chr 6:22,296,128...22,316,894
JBrowse link
G Eed embryonic ectoderm development ISO RGD PMID:23473600, PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr 1:154,189,252...154,216,340
Ensembl chr 1:154,189,260...154,216,340
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 3:1,966,974...2,123,858
Ensembl chr 3:1,960,957...2,123,820
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO RGD PMID:23200123, PMID:23642229 RGD:7242632, RGD:9479074 NCBI chr20:4,576,033...4,592,980
Ensembl chr20:4,576,057...4,592,980
JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO RGD PMID:23473600, PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:23200123, PMID:24148750, PMID:23473600 RGD:7242632, RGD:9479059, RGD:9479058 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G H2ax H2A.X variant histone ISO RGD PMID:24614311 RGD:9075965 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G H2az1 H2A.Z variant histone 1 ISO RGD PMID:24696452 RGD:9074213 NCBI chr 2:243,105,224...243,107,333
Ensembl chr 2:243,105,674...243,106,956
JBrowse link
G H3f3a H3.3 histone A ISO RGD PMID:24614311 RGD:9075965 NCBI chr13:99,091,246...99,102,828
Ensembl chr13:99,091,763...99,101,208
JBrowse link
G H3f3b H3.3 histone B ISO RGD PMID:24614311 RGD:9075965 NCBI chr10:104,573,666...104,575,890
Ensembl chr10:104,573,664...104,575,890
JBrowse link
G Hat1 histone acetyltransferase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 3:58,022,395...58,070,067
Ensembl chr 3:58,022,238...58,070,068
JBrowse link
G Hcfc1 host cell factor C1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr  X:156,812,012...156,837,227
Ensembl chr  X:156,812,064...156,837,227
JBrowse link
G Hdac1 histone deacetylase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac10 histone deacetylase 10 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:130,102,335...130,109,036
Ensembl chr 7:130,102,347...130,107,437
JBrowse link
G Hdac11 histone deacetylase 11 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 4:122,781,095...122,798,355
Ensembl chr 4:122,781,095...122,798,353
JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:21151613 RGD:9104959 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hdac3 histone deacetylase 3 ISO RGD PMID:21151613 RGD:9104959 NCBI chr18:31,073,057...31,094,347
Ensembl chr18:31,073,058...31,094,303
JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac6 histone deacetylase 6 ISO RGD PMID:21151613 RGD:9104959 NCBI chr  X:15,295,372...15,316,673
Ensembl chr  X:15,295,473...15,316,671
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Hdac7 histone deacetylase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Hdac8 histone deacetylase 8 ISO RGD PMID:21151613 RGD:9104959 NCBI chr  X:72,163,777...72,370,058
Ensembl chr  X:72,163,777...72,370,044
JBrowse link
G Hdac9 histone deacetylase 9 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 6:53,487,367...54,358,694
Ensembl chr 6:53,488,883...54,059,119
JBrowse link
G Hira histone cell cycle regulator ISO RGD PMID:23288364 RGD:9068945 NCBI chr11:86,168,196...86,276,430
Ensembl chr11:86,168,196...86,276,430
JBrowse link
G Hjurp Holliday junction recognition protein ISO RGD PMID:23288364 RGD:9068945 NCBI chr 9:95,347,739...95,362,228
Ensembl chr 9:95,349,086...95,362,014
JBrowse link
G Ing2 inhibitor of growth family, member 2 ISO RGD PMID:23642229 RGD:9479074 NCBI chr16:47,714,756...47,725,836
Ensembl chr16:47,717,951...47,725,836
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 ISO RGD PMID:23473600, PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr17:20,183,440...20,365,219
Ensembl chr17:20,184,245...20,364,714
JBrowse link
G Jmjd1c jumonji domain containing 1C ISO RGD PMID:23200123 RGD:7242632 NCBI chr20:22,751,743...22,914,080
Ensembl chr20:22,751,743...22,882,672
JBrowse link
G Kat2a lysine acetyltransferase 2A ISO RGD PMID:21151613, PMID:23642229 RGD:9104959, RGD:9479074 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G Kat2b lysine acetyltransferase 2B ISO RGD PMID:21151613 RGD:9104959 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 1:220,967,795...220,974,596
Ensembl chr 1:220,967,796...220,974,597
JBrowse link
G Kat6a lysine acetyltransferase 6A ISO RGD PMID:21151613 RGD:9104959 NCBI chr16:73,942,669...74,020,750
Ensembl chr16:73,943,455...74,023,005
JBrowse link
G Kat6b lysine acetyltransferase 6B ISO RGD PMID:21151613 RGD:9104959 NCBI chr15:2,811,933...2,966,833
Ensembl chr15:2,813,537...2,966,576
JBrowse link
G Kat7 lysine acetyltransferase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:83,095,067...83,128,342
Ensembl chr10:83,095,068...83,128,297
JBrowse link