Nsd1 (nuclear receptor binding SET domain protein 1) - Rat Genome Database

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Gene: Nsd1 (nuclear receptor binding SET domain protein 1) Chinchilla lanigera
Analyze
Symbol: Nsd1
Name: nuclear receptor binding SET domain protein 1
RGD ID: 8857905
Description: ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN gastrulation with mouth forming second (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,413,595 - 29,542,768 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,416,393 - 29,547,444 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nsd1Chinchillaacute myeloid leukemia severityISONSD1 (Homo sapiens)9068941DNA:translocations:multiple (human)RGDPMID:23630019 and REF_RGD_ID:9590149
Nsd1ChinchillaGigantism  ISONSD1 (Homo sapiens)9068941DNA:missense mutation:cds:6605G>A(p.C2202Y)(human)RGDPMID:16222665 and REF_RGD_ID:11568154
Nsd1Chinchillaneuroblastoma severityISONSD1 (Homo sapiens)9068941DNA:hypermethylation:promoter:CpG islands (human)RGDPMID:20018718 and REF_RGD_ID:9590155
Nsd1ChinchillaSkin Neoplasms  ISONsd1 (Mus musculus)9068941 RGDPMID:22832494 and REF_RGD_ID:9590156
1 to 20 of 22 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nsd1Chinchillaacute myeloid leukemia  ISONSD1 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:12464997 more ...
Nsd1Chinchillaautistic disorder  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Autistic disorderClinVarPMID:12464997 more ...
Nsd1ChinchillaBeckwith-Wiedemann syndrome  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Beckwith-Wiedemann syndromeClinVarPMID:12464997 more ...
Nsd1Chinchillachoroid plexus carcinoma  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Choroid plexus carcinomaClinVarPMID:26822237
Nsd1ChinchillaChromosome 5, Trisomy 5q  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: 5q35 microduplication syndromeClinVarPMID:31690835
Nsd1ChinchillaEhlers-Danlos syndrome dermatosparaxis type  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Ehlers-Danlos syndrome and dermatosparaxis typeClinVarPMID:16770806 more ...
Nsd1ChinchillaEhlers-Danlos syndrome spondylodysplastic type 2  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Ehlers-Danlos syndrome progeroid typeClinVarPMID:28492532
Nsd1Chinchillagenetic disease  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:11226167 more ...
Nsd1ChinchillaHereditary Neoplastic Syndromes  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary cancer-predisposing syndromeClinVarPMID:25741868 and PMID:28492532
Nsd1Chinchillahereditary spastic paraplegia 8  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary spastic paraplegia 8ClinVarPMID:25741868
Nsd1Chinchillaholoprosencephaly 2  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Holoprosencephaly 2ClinVarPMID:25741868 more ...
Nsd1ChinchillaHydrops Fetalis  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Non-immune hydrops fetalisClinVarPMID:25741868
Nsd1ChinchillaHypertelorism  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: HypertelorismClinVarPMID:12464997 more ...
Nsd1Chinchillaintellectual disability  ISONSD1 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
Nsd1ChinchillaMarfanoid Mental Retardation Syndrome, Autosomal  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Marfanoid habitus and intellectual disabilityClinVarPMID:25741868 more ...
Nsd1Chinchillamicrocephaly  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: MicrocephalyClinVarPMID:25741868
Nsd1ChinchillaNeurodevelopmental Disorders  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:16247291 more ...
Nsd1Chinchillapre-eclampsia  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: PreeclampsiaClinVarPMID:12464997 more ...
Nsd1ChinchillaSilver-Russell syndrome  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Russell-Silver syndromeClinVarPMID:27172843
Nsd1ChinchillaSotos syndrome  ISONSD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Sotos syndromeClinVarPMID:11896389 more ...
1 to 20 of 22 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nsd1Chinchillaadenoid cystic carcinoma  ISONSD1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:23685749
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nsd1ChinchillaSotos syndrome 1  ISONSD1 (Homo sapiens)7240710 OMIM 


Biological Process

  

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nsd1Chinchillanucleus located_inISONsd1 (Mus musculus)9068941 PMID:18157086MGIPMID:18157086

Molecular Function
1 to 20 of 21 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nsd1Chinchillachromatin binding enablesISONsd1 (Mus musculus)9068941 PMID:15522233MGIPMID:15522233
Nsd1Chinchillahistone H3K36 methyltransferase activity enablesISONSD1 (Homo sapiens)9068941 PMID:20837538MGIPMID:20837538
Nsd1Chinchillahistone H3K36 methyltransferase activity enablesISONsd1 (Mus musculus)9068941 PMID:12805229UniProtPMID:12805229
Nsd1Chinchillahistone H3K36 methyltransferase activity enablesISONSD1 (Homo sapiens)9068941 PMID:21196496UniProtPMID:21196496
Nsd1Chinchillahistone H4K20 methyltransferase activity enablesISONsd1 (Mus musculus)9068941 PMID:12805229UniProtPMID:12805229
Nsd1Chinchillahistone methyltransferase activity enablesISONsd1 (Mus musculus)9068941 PMID:12805229MGIPMID:12805229
Nsd1Chinchillanuclear androgen receptor binding enablesISONSD1 (Homo sapiens)9068941 PMID:11509567UniProtPMID:11509567
Nsd1Chinchillanuclear estrogen receptor binding enablesISOUniProtKB:P033729068941 PMID:9628876UniProtPMID:9628876
Nsd1Chinchillanuclear retinoic acid receptor binding enablesISOUniProtKB:P102769068941 PMID:9628876UniProtPMID:9628876
Nsd1Chinchillanuclear retinoid X receptor binding enablesISOUniProtKB:P287009068941 PMID:9628876UniProtPMID:9628876
Nsd1Chinchillanuclear thyroid hormone receptor binding enablesISOUniProtKB:P046259068941 PMID:9628876UniProtPMID:9628876
Nsd1Chinchillaprotein binding enablesISOUniProtKB:Q042069068941 PMID:20080798IntActPMID:20080798
Nsd1Chinchillaprotein binding enablesISOPR:Q5SXI59068941 PMID:15169884MGIPMID:15169884
Nsd1Chinchillaprotein binding enablesISOUniProtKB:A8MQ03 more ...9068941 PMID:32296183IntActPMID:32296183
Nsd1Chinchillaprotein binding enablesISOUniProtKB:Q132839068941 PMID:39009827IntActPMID:39009827
Nsd1Chinchillaprotein binding enablesISOUniProtKB:Q167789068941 PMID:30021884 and PMID:35271311IntActPMID:30021884 and PMID:35271311
Nsd1ChinchillaRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesISONSD1 (Homo sapiens)9068941 PMID:20837538MGIPMID:20837538
Nsd1Chinchillatranscription coregulator activity enablesISONSD1 (Homo sapiens)9068941 PMID:11509567UniProtPMID:11509567
Nsd1Chinchillatranscription coregulator activity enablesISONsd1 (Mus musculus)9068941 PMID:9628876MGIPMID:9628876
Nsd1Chinchillatranscription corepressor activity enablesISONsd1 (Mus musculus)9068941 PMID:9628876UniProtPMID:9628876
1 to 20 of 21 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nsd1Chinchillahistone modification pathway   ISONSD1 (Homo sapiens)9068941 RGDPMID:23200123 and REF_RGD_ID:7242632

#
Reference Title
Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
PMID:22301074   PMID:30032202  



Nsd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,413,595 - 29,542,768 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,416,393 - 29,547,444 (+)NCBIChiLan1.0ChiLan1.0
NSD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385177,131,798 - 177,300,213 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5177,131,830 - 177,300,213 (+)EnsemblGRCh38hg38GRCh38
GRCh375176,558,799 - 176,727,214 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365176,493,532 - 176,655,369 (+)NCBINCBI36Build 36hg18NCBI36
Build 345176,494,690 - 176,655,367NCBI
Celera5171,774,148 - 171,941,231 (-)NCBICelera
Cytogenetic Map5q35.3NCBI
HuRef5171,481,615 - 171,647,948 (+)NCBIHuRef
CHM1_15175,992,834 - 176,160,257 (+)NCBICHM1_1
T2T-CHM13v2.05177,675,008 - 177,843,448 (+)NCBIT2T-CHM13v2.0
Nsd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,357,595 - 55,466,138 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1355,357,595 - 55,466,138 (+)EnsemblGRCm39 Ensembl
GRCm381355,209,782 - 55,318,325 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,209,782 - 55,318,325 (+)EnsemblGRCm38mm10GRCm38
MGSCv371355,311,143 - 55,419,686 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361355,243,517 - 55,324,503 (+)NCBIMGSCv36mm8
Celera1356,265,599 - 56,373,905 (+)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1329.8NCBI
Nsd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8179,317,085 - 9,431,528 (-)NCBIGRCr8
mRatBN7.2179,311,963 - 9,426,373 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl179,315,237 - 9,425,358 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx179,328,369 - 9,440,603 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01710,857,509 - 10,970,288 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0179,324,761 - 9,437,004 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0179,840,859 - 9,955,391 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,844,133 - 9,952,898 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01711,950,539 - 12,065,042 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41715,362,482 - 15,471,961 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11715,363,376 - 15,471,151 (-)NCBI
Celera179,393,607 - 9,502,492 (-)NCBICelera
Cytogenetic Map17p14NCBI
NSD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24172,214,174 - 172,384,745 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15170,353,696 - 170,524,284 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05172,431,968 - 172,602,174 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15179,499,866 - 179,666,351 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5179,499,865 - 179,666,351 (+)Ensemblpanpan1.1panPan2
NSD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1436,058,351 - 36,214,254 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl436,063,134 - 36,210,999 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha436,025,606 - 36,179,354 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0436,424,511 - 36,576,907 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl436,429,281 - 36,578,335 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1436,249,611 - 36,403,905 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0436,435,795 - 36,591,251 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0436,945,351 - 37,099,849 (-)NCBIUU_Cfam_GSD_1.0
Nsd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213122,401,170 - 122,552,286 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365971,425,974 - 1,572,715 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365971,426,318 - 1,577,193 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NSD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl280,654,379 - 80,809,059 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1280,649,882 - 80,810,934 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2282,120,312 - 82,218,958 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NSD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12379,140,148 - 79,309,579 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2379,141,114 - 79,304,820 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607510,326,178 - 10,497,901 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nsd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473312,786,347 - 12,927,980 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473312,781,693 - 12,929,861 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

1 to 10 of 292 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 4p16.3-15.1(chr4:72555-28066309)x1 copy number loss See cases [RCV000051642] Chr4:72555..28066309 [GRCh38]
Chr4:72447..28067931 [GRCh37]
Chr4:62447..27677029 [NCBI36]
Chr4:4p16.3-15.1
pathogenic
GRCh38/hg38 4p16.3-15.33(chr4:56878-14499760)x1 copy number loss See cases [RCV000051614] Chr4:56878..14499760 [GRCh38]
Chr4:56772..14501384 [GRCh37]
Chr4:46772..14110482 [NCBI36]
Chr4:4p16.3-15.33
pathogenic
GRCh38/hg38 4p16.3-15.2(chr4:51519-26519788)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051752]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051752]|See cases [RCV000051752] Chr4:51519..26519788 [GRCh38]
Chr4:51413..26521410 [GRCh37]
Chr4:41413..26130508 [NCBI36]
Chr4:4p16.3-15.2
pathogenic
GRCh38/hg38 4p16.3-15.1(chr4:72555-33130620)x3 copy number gain See cases [RCV000051753] Chr4:72555..33130620 [GRCh38]
Chr4:72447..33132242 [GRCh37]
Chr4:62447..32808637 [NCBI36]
Chr4:4p16.3-15.1
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:2231690-11197847)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051758]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051758]|See cases [RCV000051758] Chr4:2231690..11197847 [GRCh38]
Chr4:2233417..11199471 [GRCh37]
Chr4:2203215..10808569 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:72555-10004195)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051672]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051672]|See cases [RCV000051672] Chr4:72555..10004195 [GRCh38]
Chr4:72447..10005819 [GRCh37]
Chr4:62447..9614917 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-15.2(chr4:85149-22450018)x3 copy number gain See cases [RCV000051755] Chr4:85149..22450018 [GRCh38]
Chr4:85040..22451641 [GRCh37]
Chr4:75040..22060739 [NCBI36]
Chr4:4p16.3-15.2
pathogenic
GRCh38/hg38 4p16.3-15.32(chr4:85149-17486742)x1 copy number loss See cases [RCV000051679] Chr4:85149..17486742 [GRCh38]
Chr4:85040..17488365 [GRCh37]
Chr4:75040..17097463 [NCBI36]
Chr4:4p16.3-15.32
pathogenic
GRCh38/hg38 4p16.3-14(chr4:85149-38700366)x3 copy number gain See cases [RCV000051757] Chr4:85149..38700366 [GRCh38]
Chr4:85040..38701987 [GRCh37]
Chr4:75040..38378382 [NCBI36]
Chr4:4p16.3-14
pathogenic
GRCh38/hg38 4p16.3-15.33(chr4:72555-11610824)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051674]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051674]|See cases [RCV000051674] Chr4:72555..11610824 [GRCh38]
Chr4:72447..11612448 [GRCh37]
Chr4:62447..11221546 [NCBI36]
Chr4:4p16.3-15.33
pathogenic
1 to 10 of 292 rows






Ensembl Acc Id: ENSCLAT00000019870   ⟹   ENSCLAP00000019677
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540829,413,595 - 29,542,768 (+)Ensembl
Ensembl Acc Id: ENSCLAT00000019871   ⟹   ENSCLAP00000019678
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540829,415,068 - 29,542,768 (+)Ensembl
Ensembl Acc Id: ENSCLAT00000019872   ⟹   ENSCLAP00000019679
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540829,415,068 - 29,542,768 (+)Ensembl
RefSeq Acc Id: XM_013509737   ⟹   XP_013365191
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,416,393 - 29,547,444 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013509739   ⟹   XP_013365193
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,416,393 - 29,547,444 (+)NCBI
Sequence:
Protein RefSeqs XP_013365191 (Get FASTA)   NCBI Sequence Viewer  
  XP_013365193 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000019677.1
  ENSCLAP00000019678
  ENSCLAP00000019678.1
  ENSCLAP00000019679
  ENSCLAP00000019679.1
RefSeq Acc Id: XP_013365191   ⟸   XM_013509737
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VW26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013365193   ⟸   XM_013509739
- Peptide Label: isoform X2
- UniProtKB: A0A8C2VYW5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000019679   ⟸   ENSCLAT00000019872
Ensembl Acc Id: ENSCLAP00000019678   ⟸   ENSCLAT00000019871
Ensembl Acc Id: ENSCLAP00000019677   ⟸   ENSCLAT00000019870
AWS   PHD-type   Post-SET   PWWP   SET



1 to 40 of 56 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCLAG00000013501 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000019870.1 UniProtKB/TrEMBL
  ENSCLAT00000019871 ENTREZGENE
  ENSCLAT00000019871.1 UniProtKB/TrEMBL
  ENSCLAT00000019872 ENTREZGENE
  ENSCLAT00000019872.1 UniProtKB/TrEMBL
Gene3D-CATH 2.170.270.10 UniProtKB/TrEMBL
  2.30.30.140 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro AWS_dom UniProtKB/TrEMBL
  C5HCH UniProtKB/TrEMBL
  NSD_PHD UniProtKB/TrEMBL
  PHD1_NSD1_2 UniProtKB/TrEMBL
  PHD2_NSD1 UniProtKB/TrEMBL
  PHD3_NSD1 UniProtKB/TrEMBL
  PHD4_NSD1 UniProtKB/TrEMBL
  PHD5_NSD1 UniProtKB/TrEMBL
  PHDvar_NSD UniProtKB/TrEMBL
  Post-SET_dom UniProtKB/TrEMBL
  PWWP_dom UniProtKB/TrEMBL
  PWWP_NSD1_rpt2 UniProtKB/TrEMBL
  SET2_Histone-Lys_MeTrsfase UniProtKB/TrEMBL
  SET_dom UniProtKB/TrEMBL
  SET_dom_sf UniProtKB/TrEMBL
  SET_NSD1 UniProtKB/TrEMBL
  Zinc_finger_PHD-type_CS UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene Nsd1 ENTREZGENE
PANTHER SET DOMAIN PROTEINS UniProtKB/TrEMBL
Pfam AWS UniProtKB/TrEMBL
  C5HCH UniProtKB/TrEMBL
  NSD_PHD UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
  PHD-1st_NSD UniProtKB/TrEMBL
  PHDvar_NSD UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
  SET UniProtKB/TrEMBL
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