Symbol:
Nsd3
Name:
nuclear receptor binding SET domain protein 3
RGD ID:
8767373
Description:
ENCODES a protein that exhibits histone H3K27 dimethyltransferase activity (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K27 trimethyltransferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH hereditary spastic paraplegia 54 (ortholog); hypogonadotropic hypogonadism 2 with or without anosmia (ortholog); myeloid leukemia (ortholog); FOUND IN nucleus (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
histone-lysine N-methyltransferase NSD3; Whsc1l1; Wolf-Hirschhorn syndrome candidate 1-like 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information:
Annotation category: partial on reference assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955463 13,869,610 - 13,946,830 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955463 13,864,294 - 13,985,995 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Nsd3 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955463 13,869,610 - 13,946,830 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955463 13,864,294 - 13,985,995 (-) NCBI ChiLan1.0 ChiLan1.0
NSD3 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 8 38,269,704 - 38,382,271 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 8 38,269,704 - 38,382,272 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 8 38,127,222 - 38,239,789 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 8 38,251,717 - 38,358,947 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 8 38,251,716 - 38,358,947 NCBI Celera 8 37,085,612 - 37,192,859 (-) NCBI Celera Cytogenetic Map 8 p11.23 NCBI HuRef 8 36,666,622 - 36,774,003 (-) NCBI HuRef CHM1_1 8 38,334,565 - 38,441,681 (-) NCBI CHM1_1 T2T-CHM13v2.0 8 38,546,659 - 38,659,240 (-) NCBI T2T-CHM13v2.0
Nsd3 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 8 26,091,617 - 26,209,694 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 8 26,091,617 - 26,209,694 (+) Ensembl GRCm39 Ensembl GRCm38 8 25,601,601 - 25,719,667 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 8 25,601,601 - 25,719,667 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 8 26,712,778 - 26,830,139 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 8 27,067,146 - 27,185,212 (+) NCBI MGSCv36 mm8 Celera 8 27,070,741 - 27,187,953 (+) NCBI Celera Cytogenetic Map 8 A2 NCBI cM Map 8 14.17 NCBI
Nsd3 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 16 73,056,748 - 73,170,082 (-) NCBI GRCr8 mRatBN7.2 16 66,354,030 - 66,466,202 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 16 66,358,973 - 66,465,423 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 16 71,637,714 - 71,744,185 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 16 75,044,021 - 75,150,119 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 16 70,283,886 - 70,390,817 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 16 71,126,276 - 71,237,118 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 16 71,130,668 - 71,237,118 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 16 70,786,828 - 70,897,651 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 16 70,733,902 - 70,839,802 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 16 70,734,444 - 70,806,495 (-) NCBI Celera 16 64,268,667 - 64,374,056 (-) NCBI Celera Cytogenetic Map 16 q12.4 NCBI
NSD3 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 7 56,833,190 - 56,946,563 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 8 32,550,256 - 32,662,694 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 8 37,571,831 - 37,684,297 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 8 34,748,409 - 34,860,766 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 8 34,754,353 - 34,860,766 (-) Ensembl panpan1.1 panPan2
NSD3 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 16 27,106,348 - 27,225,049 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 16 27,151,222 - 27,219,907 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 16 27,619,192 - 27,742,909 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 16 29,000,367 - 29,124,143 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 16 29,004,852 - 29,120,206 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 16 27,223,565 - 27,347,012 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 16 27,800,625 - 27,924,334 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 16 27,839,601 - 27,963,573 (+) NCBI UU_Cfam_GSD_1.0
Nsd3 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404943 49,728,386 - 49,835,860 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936710 1,631,234 - 1,732,827 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936710 1,629,178 - 1,732,827 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
NSD3 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 15 48,136,363 - 48,241,815 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 15 48,119,132 - 48,245,673 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 15 55,298,067 - 55,405,286 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
NSD3 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 8 36,288,997 - 36,398,334 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 8 36,291,104 - 36,398,246 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666052 5,590,913 - 5,700,754 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Nsd3
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000002100 ⟹ ENSCLAP00000002055
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955463 13,869,610 - 13,946,830 (-) Ensembl
Ensembl Acc Id:
ENSCLAT00000002101 ⟹ ENSCLAP00000002056
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955463 13,869,610 - 13,946,830 (-) Ensembl
RefSeq Acc Id:
XM_005398440 ⟹ XP_005398497
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955463 13,864,294 - 13,985,995 (-) NCBI
Sequence:
CGCGGCGGCGGCGGTGGCGGCGGCTGGGTCGGGCCCCGACGGGCGGCGGCGGCTGAGGTGGAGGCGGTGGGCGGCGGCGGCGGCGGCGGCGGGAGCGGCGGCCAGCGCGGAGGCGGGGGCGGGGACGG
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RefSeq Acc Id:
XP_005398497 ⟸ XM_005398440
- UniProtKB:
A0A8C2UQX9 (UniProtKB/TrEMBL), A0A8C2UMS8 (UniProtKB/TrEMBL)
- Sequence:
MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNNSDIVEDGGQTPYEATLQQGFQYPPTTDDLPPLTNGYPPSISMYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTRPHEILEKP
hide sequence
Ensembl Acc Id:
ENSCLAP00000002055 ⟸ ENSCLAT00000002100
Ensembl Acc Id:
ENSCLAP00000002056 ⟸ ENSCLAT00000002101
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-11-22
Nsd3
nuclear receptor binding SET domain protein 3
Whsc1l1
Wolf-Hirschhorn syndrome candidate 1-like 1
Symbol and/or name change
5135510 APPROVED
