NSD3 (nuclear receptor binding SET domain protein 3) - Rat Genome Database

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Gene: NSD3 (nuclear receptor binding SET domain protein 3) Canis lupus familiaris
Analyze
Symbol: NSD3
Name: nuclear receptor binding SET domain protein 3
RGD ID: 12278688
Description: ENCODES a protein that exhibits histone H3K27 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH hereditary spastic paraplegia 54 (ortholog); hypogonadotropic hypogonadism 2 with or without anosmia (ortholog); myeloid leukemia (ortholog); FOUND IN chromosome (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: histone-lysine N-methyltransferase NSD3; WHSC1L1; Wolf-Hirschhorn syndrome candidate 1-like 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11627,106,348 - 27,225,049 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1627,151,222 - 27,219,907 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1627,619,192 - 27,742,909 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01629,000,367 - 29,124,143 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1629,004,852 - 29,120,206 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11627,223,565 - 27,347,012 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01627,800,625 - 27,924,334 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01627,839,601 - 27,963,573 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
chromosome  (IEA)
nucleus  (IEA)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NSD3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11627,106,348 - 27,225,049 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1627,151,222 - 27,219,907 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1627,619,192 - 27,742,909 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01629,000,367 - 29,124,143 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1629,004,852 - 29,120,206 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11627,223,565 - 27,347,012 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01627,800,625 - 27,924,334 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01627,839,601 - 27,963,573 (+)NCBIUU_Cfam_GSD_1.0
NSD3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38838,269,704 - 38,382,271 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl838,269,704 - 38,382,272 (-)EnsemblGRCh38hg38GRCh38
GRCh37838,127,222 - 38,239,789 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36838,251,717 - 38,358,947 (-)NCBINCBI36Build 36hg18NCBI36
Build 34838,251,716 - 38,358,947NCBI
Celera837,085,612 - 37,192,859 (-)NCBICelera
Cytogenetic Map8p11.23NCBI
HuRef836,666,622 - 36,774,003 (-)NCBIHuRef
CHM1_1838,334,565 - 38,441,681 (-)NCBICHM1_1
T2T-CHM13v2.0838,546,659 - 38,659,240 (-)NCBIT2T-CHM13v2.0
Nsd3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39826,091,617 - 26,209,694 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl826,091,617 - 26,209,694 (+)EnsemblGRCm39 Ensembl
GRCm38825,601,601 - 25,719,667 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl825,601,601 - 25,719,667 (+)EnsemblGRCm38mm10GRCm38
MGSCv37826,712,778 - 26,830,139 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36827,067,146 - 27,185,212 (+)NCBIMGSCv36mm8
Celera827,070,741 - 27,187,953 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map814.17NCBI
Nsd3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81673,056,748 - 73,170,082 (-)NCBIGRCr8
mRatBN7.21666,354,030 - 66,466,202 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1666,358,973 - 66,465,423 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1671,637,714 - 71,744,185 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01675,044,021 - 75,150,119 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01670,283,886 - 70,390,817 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01671,126,276 - 71,237,118 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1671,130,668 - 71,237,118 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01670,786,828 - 70,897,651 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41670,733,902 - 70,839,802 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11670,734,444 - 70,806,495 (-)NCBI
Celera1664,268,667 - 64,374,056 (-)NCBICelera
Cytogenetic Map16q12.4NCBI
Nsd3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546313,869,610 - 13,946,830 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546313,864,294 - 13,985,995 (-)NCBIChiLan1.0ChiLan1.0
NSD3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2756,833,190 - 56,946,563 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1832,550,256 - 32,662,694 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0837,571,831 - 37,684,297 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1834,748,409 - 34,860,766 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl834,754,353 - 34,860,766 (-)Ensemblpanpan1.1panPan2
Nsd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494349,728,386 - 49,835,860 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367101,631,234 - 1,732,827 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367101,629,178 - 1,732,827 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NSD3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1548,136,363 - 48,241,815 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11548,119,132 - 48,245,673 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21555,298,067 - 55,405,286 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NSD3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1836,288,997 - 36,398,334 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl836,291,104 - 36,398,246 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660525,590,913 - 5,700,754 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nsd3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247805,241,537 - 5,363,325 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247805,241,556 - 5,367,815 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NSD3
974 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005629853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005629854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005629855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005629856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014120026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_852077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000009828   ⟹   ENSCAFP00000009124
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1627,151,222 - 27,219,907 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000009845   ⟹   ENSCAFP00000009141
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1627,151,222 - 27,180,992 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000048373   ⟹   ENSCAFP00000041235
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1627,151,222 - 27,219,907 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000073127   ⟹   ENSCAFP00000057330
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1627,151,222 - 27,174,567 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022531   ⟹   ENSCAFP00845017687
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1629,004,852 - 29,080,312 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022616   ⟹   ENSCAFP00845017745
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1629,004,893 - 29,120,206 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022700   ⟹   ENSCAFP00845017802
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1629,004,893 - 29,120,206 (+)Ensembl
RefSeq Acc Id: XM_005629854   ⟹   XP_005629911
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11627,106,348 - 27,225,049 (+)NCBI
Dog10K_Boxer_Tasha1627,623,684 - 27,742,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005629856   ⟹   XP_005629913
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11627,106,348 - 27,225,049 (+)NCBI
Dog10K_Boxer_Tasha1627,623,684 - 27,742,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014120026   ⟹   XP_013975501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11627,106,348 - 27,225,049 (+)NCBI
Dog10K_Boxer_Tasha1627,623,684 - 27,742,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038452227   ⟹   XP_038308155
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1627,619,192 - 27,742,909 (+)NCBI
RefSeq Acc Id: XM_038452228   ⟹   XP_038308156
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1627,623,684 - 27,742,909 (+)NCBI
RefSeq Acc Id: XM_038497584   ⟹   XP_038353512
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11627,228,017 - 27,347,012 (+)NCBI
RefSeq Acc Id: XM_038497585   ⟹   XP_038353513
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11627,223,565 - 27,347,012 (+)NCBI
RefSeq Acc Id: XM_038497586   ⟹   XP_038353514
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11627,228,017 - 27,347,012 (+)NCBI
RefSeq Acc Id: XM_038497588   ⟹   XP_038353516
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11627,228,017 - 27,347,012 (+)NCBI
RefSeq Acc Id: XM_038497589   ⟹   XP_038353517
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11627,228,017 - 27,347,012 (+)NCBI
RefSeq Acc Id: XM_038497590   ⟹   XP_038353518
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11627,228,017 - 27,303,461 (+)NCBI
RefSeq Acc Id: XM_038560047   ⟹   XP_038415975
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01627,844,091 - 27,963,573 (+)NCBI
RefSeq Acc Id: XM_038560048   ⟹   XP_038415976
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01627,839,601 - 27,963,573 (+)NCBI
RefSeq Acc Id: XM_038560049   ⟹   XP_038415977
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01627,844,091 - 27,963,573 (+)NCBI
RefSeq Acc Id: XM_038560050   ⟹   XP_038415978
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01627,844,091 - 27,963,573 (+)NCBI
RefSeq Acc Id: XM_038560051   ⟹   XP_038415979
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01627,844,091 - 27,963,573 (+)NCBI
RefSeq Acc Id: XM_038560052   ⟹   XP_038415980
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01627,844,091 - 27,919,993 (+)NCBI
RefSeq Acc Id: XM_038624092   ⟹   XP_038480020
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01627,805,115 - 27,924,334 (+)NCBI
RefSeq Acc Id: XM_038624093   ⟹   XP_038480021
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01627,800,625 - 27,924,334 (+)NCBI
RefSeq Acc Id: XM_038624094   ⟹   XP_038480022
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01627,805,115 - 27,924,334 (+)NCBI
RefSeq Acc Id: XM_038624095   ⟹   XP_038480023
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01627,805,115 - 27,924,334 (+)NCBI
RefSeq Acc Id: XM_038624096   ⟹   XP_038480024
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01627,805,115 - 27,924,334 (+)NCBI
RefSeq Acc Id: XM_038624097   ⟹   XP_038480025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01627,805,115 - 27,880,796 (+)NCBI
RefSeq Acc Id: XM_038689844   ⟹   XP_038545772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01629,004,852 - 29,124,143 (+)NCBI
RefSeq Acc Id: XM_038689845   ⟹   XP_038545773
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01629,000,367 - 29,124,143 (+)NCBI
RefSeq Acc Id: XM_038689846   ⟹   XP_038545774
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01629,004,852 - 29,124,143 (+)NCBI
RefSeq Acc Id: XM_038689847   ⟹   XP_038545775
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01629,004,852 - 29,124,143 (+)NCBI
RefSeq Acc Id: XM_038689848   ⟹   XP_038545776
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01629,004,852 - 29,124,143 (+)NCBI
RefSeq Acc Id: XM_038689849   ⟹   XP_038545777
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01629,004,852 - 29,080,358 (+)NCBI
RefSeq Acc Id: XM_852077   ⟹   XP_857170
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11627,106,348 - 27,181,814 (+)NCBI
Dog10K_Boxer_Tasha1627,623,684 - 27,699,147 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005629911 (Get FASTA)   NCBI Sequence Viewer  
  XP_005629913 (Get FASTA)   NCBI Sequence Viewer  
  XP_013975501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308155 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308156 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353512 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353513 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353514 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353516 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353517 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353518 (Get FASTA)   NCBI Sequence Viewer  
  XP_038415975 (Get FASTA)   NCBI Sequence Viewer  
  XP_038415976 (Get FASTA)   NCBI Sequence Viewer  
  XP_038415977 (Get FASTA)   NCBI Sequence Viewer  
  XP_038415978 (Get FASTA)   NCBI Sequence Viewer  
  XP_038415979 (Get FASTA)   NCBI Sequence Viewer  
  XP_038415980 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480020 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480021 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480022 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480023 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480024 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480025 (Get FASTA)   NCBI Sequence Viewer  
  XP_038545772 (Get FASTA)   NCBI Sequence Viewer  
  XP_038545773 (Get FASTA)   NCBI Sequence Viewer  
  XP_038545774 (Get FASTA)   NCBI Sequence Viewer  
  XP_038545775 (Get FASTA)   NCBI Sequence Viewer  
  XP_038545776 (Get FASTA)   NCBI Sequence Viewer  
  XP_038545777 (Get FASTA)   NCBI Sequence Viewer  
  XP_857170 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000009124.4
  ENSCAFP00000009141.3
  ENSCAFP00000041235.2
  ENSCAFP00000057330.2
  ENSCAFP00030022792.1
  ENSCAFP00030022893.1
  ENSCAFP00030022961.1
  ENSCAFP00030023057.1
  ENSCAFP00040015647.1
  ENSCAFP00040015790.1
  ENSCAFP00040015936.1
  ENSCAFP00040016113.1
  ENSCAFP00845017687
  ENSCAFP00845017687.1
  ENSCAFP00845017745
  ENSCAFP00845017745.1
  ENSCAFP00845017802
  ENSCAFP00845017802.1
RefSeq Acc Id: XP_005629911   ⟸   XM_005629854
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005629913   ⟸   XM_005629856
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013975501   ⟸   XM_014120026
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NCH1 (UniProtKB/TrEMBL),   A0A8I3NMU7 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_857170   ⟸   XM_852077
- Peptide Label: isoform X4
- UniProtKB: A0A8C0N8D4 (UniProtKB/TrEMBL),   A0A8C0JPD9 (UniProtKB/TrEMBL),   A0A8I3NM11 (UniProtKB/TrEMBL),   A0A8C0RK26 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000057330   ⟸   ENSCAFT00000073127
Ensembl Acc Id: ENSCAFP00000041235   ⟸   ENSCAFT00000048373
Ensembl Acc Id: ENSCAFP00000009141   ⟸   ENSCAFT00000009845
Ensembl Acc Id: ENSCAFP00000009124   ⟸   ENSCAFT00000009828
RefSeq Acc Id: XP_038353513   ⟸   XM_038497585
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353512   ⟸   XM_038497584
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353514   ⟸   XM_038497586
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353516   ⟸   XM_038497588
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038353517   ⟸   XM_038497589
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038353518   ⟸   XM_038497590
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038480021   ⟸   XM_038624093
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480020   ⟸   XM_038624092
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480022   ⟸   XM_038624094
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480023   ⟸   XM_038624095
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038480024   ⟸   XM_038624096
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038480025   ⟸   XM_038624097
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038545773   ⟸   XM_038689845
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038545772   ⟸   XM_038689844
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038545774   ⟸   XM_038689846
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038545775   ⟸   XM_038689847
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038545776   ⟸   XM_038689848
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NCH1 (UniProtKB/TrEMBL),   A0A8I3NMU7 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038545777   ⟸   XM_038689849
- Peptide Label: isoform X4
- UniProtKB: A0A8C0N8D4 (UniProtKB/TrEMBL),   A0A8C0JPD9 (UniProtKB/TrEMBL),   A0A8I3NM11 (UniProtKB/TrEMBL),   A0A8C0RK26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308155   ⟸   XM_038452227
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308156   ⟸   XM_038452228
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415976   ⟸   XM_038560048
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415975   ⟸   XM_038560047
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415977   ⟸   XM_038560049
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S485 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8I3NPJ0 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415978   ⟸   XM_038560050
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415979   ⟸   XM_038560051
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NCH1 (UniProtKB/TrEMBL),   A0A8C0YTM9 (UniProtKB/TrEMBL),   A0A8I3NMU7 (UniProtKB/TrEMBL),   A0A8P0T9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415980   ⟸   XM_038560052
- Peptide Label: isoform X4
- UniProtKB: A0A8C0JPD9 (UniProtKB/TrEMBL),   A0A8C0N8D4 (UniProtKB/TrEMBL),   A0A8C0RK26 (UniProtKB/TrEMBL),   A0A8I3NM11 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845017745   ⟸   ENSCAFT00845022616
Ensembl Acc Id: ENSCAFP00845017802   ⟸   ENSCAFT00845022700
Ensembl Acc Id: ENSCAFP00845017687   ⟸   ENSCAFT00845022531
Protein Domains
AWS   PHD-type   Post-SET   PWWP   SET


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000006057 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030014072 UniProtKB/TrEMBL
  ENSCAFG00040009638 UniProtKB/TrEMBL
  ENSCAFG00845012660 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000009828.6 UniProtKB/TrEMBL
  ENSCAFT00000009845.6 UniProtKB/TrEMBL
  ENSCAFT00000048373.3 UniProtKB/TrEMBL
  ENSCAFT00000073127.2 UniProtKB/TrEMBL
  ENSCAFT00030026101.1 UniProtKB/TrEMBL
  ENSCAFT00030026218.1 UniProtKB/TrEMBL
  ENSCAFT00030026300.1 UniProtKB/TrEMBL
  ENSCAFT00030026413.1 UniProtKB/TrEMBL
  ENSCAFT00040018021.1 UniProtKB/TrEMBL
  ENSCAFT00040018189.1 UniProtKB/TrEMBL
  ENSCAFT00040018354.1 UniProtKB/TrEMBL
  ENSCAFT00040018574.1 UniProtKB/TrEMBL
  ENSCAFT00845022531 ENTREZGENE
  ENSCAFT00845022531.1 UniProtKB/TrEMBL
  ENSCAFT00845022616 ENTREZGENE
  ENSCAFT00845022616.1 UniProtKB/TrEMBL
  ENSCAFT00845022700 ENTREZGENE
  ENSCAFT00845022700.1 UniProtKB/TrEMBL
Gene3D-CATH 2.170.270.10 UniProtKB/TrEMBL
  2.30.30.140 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro AWS_dom UniProtKB/TrEMBL
  C5HCH UniProtKB/TrEMBL
  NSD_PHD UniProtKB/TrEMBL
  PHD2_NSD3 UniProtKB/TrEMBL
  PHD4_NSD3 UniProtKB/TrEMBL
  PHD5_NSD3 UniProtKB/TrEMBL
  PHDvar_NSD UniProtKB/TrEMBL
  Post-SET_dom UniProtKB/TrEMBL
  PWWP_dom UniProtKB/TrEMBL
  PWWP_NSD3_rpt1 UniProtKB/TrEMBL
  PWWP_NSD3_rpt2 UniProtKB/TrEMBL
  SET2_Histone-Lys_MeTrsfase UniProtKB/TrEMBL
  SET_dom UniProtKB/TrEMBL
  SET_dom_sf UniProtKB/TrEMBL
  SET_NSD3 UniProtKB/TrEMBL
  Zinc_finger_PHD-type_CS UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report cfa:475584 UniProtKB/TrEMBL
NCBI Gene NSD3 ENTREZGENE
PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE NSD3 UniProtKB/TrEMBL
  SET DOMAIN PROTEINS UniProtKB/TrEMBL
Pfam AWS UniProtKB/TrEMBL
  C5HCH UniProtKB/TrEMBL
  NSD_PHD UniProtKB/TrEMBL
  PHD-1st_NSD UniProtKB/TrEMBL
  PHDvar_NSD UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
  SET UniProtKB/TrEMBL
PROSITE AWS UniProtKB/TrEMBL
  POST_SET UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
  SET UniProtKB/TrEMBL
  ZF_PHD_1 UniProtKB/TrEMBL
  ZF_PHD_2 UniProtKB/TrEMBL
SMART AWS UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
  PostSET UniProtKB/TrEMBL
  PWWP UniProtKB/TrEMBL
  SET UniProtKB/TrEMBL
Superfamily-SCOP SSF57903 UniProtKB/TrEMBL
  SSF82199 UniProtKB/TrEMBL
  Tudor/PWWP/MBT UniProtKB/TrEMBL
UniProt A0A8C0JPD9 ENTREZGENE
  A0A8C0N8D4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0NCH1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RK26 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S485 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0YTM9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NM11 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NMU7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NPJ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T9F1 ENTREZGENE
UniProt Secondary A0A8P0T9F1 UniProtKB/TrEMBL
VGNC ID VGNC:43982 ENTREZGENE