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ONTOLOGY REPORT - ANNOTATIONS

Term:hindbrain development
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Accession:GO:0030902 term browser browse the term
Definition:The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium).
Synonyms:exact_synonym: rhombencephalon development


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hindbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15872003) Ensembl
MGI		 PMID:15872003 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in ISO (PMID:10079236) BHF-UCL PMID:10079236 NCBI chr12:23,089,429...23,202,176
Ensembl chr12:23,089,459...23,202,348 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G EN1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15607945) Ensembl
MGI		 PMID:15607945 GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G EN2 engrailed homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15607945) Ensembl
MGI		 PMID:15607945 GO_REF:0000107 NCBI chr16:18,358,100...18,365,827 JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15829521), (PMID:16651541) Ensembl
MGI		 PMID:15829521 PMID:16651541 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8575294)
(PMID:15496441)		 Ensembl
MGI		 PMID:8575294 PMID:15496441 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15872003) Ensembl
MGI		 PMID:15872003 GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:15367676) MGI PMID:15367676 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:16368089) MGI PMID:16368089 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr 4:20,654,824...20,657,816
Ensembl chr 4:20,656,791...20,657,438 		JBrowse link
G NFIB nuclear factor I B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15632069) Ensembl
MGI		 PMID:15632069 GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11880342 PMID:20082710 RGD:729590 RGD:8552345
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:9749725 RGD:9831452 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183722)
(PMID:15496441)		 Ensembl
MGI		 PMID:15183722 PMID:15496441 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMAD1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15899870) Ensembl
MGI		 PMID:15899870 GO_REF:0000107 NCBI chr15:44,093,491...44,171,177
Ensembl chr15:44,095,497...44,170,098 		JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (PMID:15899870) MGI PMID:15899870 NCBI chr25:3,768,851...3,844,645
Ensembl chr25:3,779,197...3,841,321 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:16330018) MGI PMID:16330018 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16540585) Ensembl
MGI		 PMID:16540585 GO_REF:0000107 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900 		JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11231055 RGD:2302116 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:20614471) ParkinsonsUK-UCL PMID:20614471 NCBI chr 6:77,053,242...77,146,549
Ensembl chr 6:77,053,237...77,317,761 		JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072 		JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10357893) Ensembl
MGI		 PMID:10357893 GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PHOX2B paired like homeobox 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17922007) Ensembl
MGI		 PMID:17922007 GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within ISO (PMID:17573818) UniProt PMID:17573818 NCBI chr17:53,359,275...53,363,753
Ensembl chr17:53,359,258...53,458,795 		JBrowse link
G POU4F1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8955272) Ensembl
MGI		 PMID:8955272 GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592 		JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10970885) Ensembl
MGI		 PMID:10970885 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chr 1:108,659,637...108,704,217
Ensembl chr 1:108,659,637...108,675,401 		JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chr  X:88,703,551...88,708,451
Ensembl chr  X:88,705,765...88,706,853 		JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8855328) Ensembl
MGI		 PMID:8855328 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CLP1 cleavage factor polyribonucleotide kinase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:38,528,700...38,531,899
Ensembl chr18:38,528,621...38,530,846 		JBrowse link
G DIXDC1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20798045) Ensembl
MGI		 PMID:20798045 GO_REF:0000107 NCBI chr16:1,926,443...1,991,995
Ensembl chr16:1,925,956...1,991,838 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr11:61,394,002...61,462,056
Ensembl chr11:61,405,034...61,461,396 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,864,708...22,869,044
Ensembl chr 9:22,866,212...22,867,360 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10407039) Ensembl
MGI		 PMID:10407039 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24431450) Ensembl
MGI		 PMID:24431450 GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24431450) Ensembl
MGI		 PMID:24431450 GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481 		JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:28556830) MGI PMID:28556830 NCBI chr26:29,359,930...29,381,854
Ensembl chr26:29,360,356...29,366,008 		JBrowse link
G DIP2A disco interacting protein 2 homolog A acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484 		JBrowse link
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571625) Ensembl
MGI		 PMID:16571625 GO_REF:0000107 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571625) Ensembl
MGI		 PMID:16571625 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G LOC106559920 TMF1 regulated nuclear protein 1 involved_in ISO (PMID:23622239) UniProt PMID:23622239 NCBI chr17:62,290,748...62,309,870 JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chr37:25,811,491...25,818,838 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571625) Ensembl
MGI		 PMID:16571625 GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G TRNP1 TMF1 regulated nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:73,168,298...73,172,692 JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:35,522,873...35,676,086 JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G LOC491316 midkine involved_in ISO (PMID:10096022) DFLAT PMID:10096022 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) ARUK-UCL PMID:26323690 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20153830) Ensembl
MGI		 PMID:20153830 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 acts_upstream_of_or_within ISO (PMID:17409116) MGI PMID:17409116 NCBI chr37:29,699,551...29,750,151
Ensembl chr37:29,700,024...29,724,228 		JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179 		JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:15,322,256...16,787,966
Ensembl chr32:15,322,738...16,753,656 		JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17984326) MGI
Ensembl		 PMID:17984326 GO_REF:0000107 NCBI chr28:40,757,950...40,790,603 JBrowse link
G MTPN myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr16:12,316,487...12,369,148
Ensembl chr16:12,316,336...12,369,387 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within
involved_in		 ISO (PMID:21800304)
(PMID:23042739)		 MGI PMID:21800304 PMID:23042739 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:20537373) BHF-UCL PMID:20537373 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569 		JBrowse link
G OPHN1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chr  X:52,418,390...52,983,155
Ensembl chr  X:52,455,373...52,982,244 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) MGI PMID:9405095 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502 		JBrowse link
G EGF epidermal growth factor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16651541) Ensembl
MGI		 PMID:16651541 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G PSMG1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO (PMID:20498273) MGI PMID:20498273 NCBI chr31:33,914,640...33,925,925
Ensembl chr31:33,914,668...33,925,883 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G ZNF423 zinc finger protein 423 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27727273) Ensembl
MGI		 PMID:27727273 GO_REF:0000107 NCBI chr 2:65,512,342...65,778,410
Ensembl chr 2:65,438,842...65,778,407 		JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA2 plexin A2 acts_upstream_of_or_within ISO (PMID:18327254) MGI PMID:18327254 NCBI chr 7:6,863,518...7,049,301
Ensembl chr 7:6,863,663...7,049,250 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) ARUK-UCL PMID:26323690 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:23688253) UniProt PMID:23688253 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chr 9:45,594,657...45,627,499
Ensembl chr 9:45,598,899...45,627,589 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein involved_in IEA Ensembl GO_REF:0000107
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19074029) Ensembl
MGI		 PMID:19074029 GO_REF:0000107 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964 		JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chr  X:121,708,695...121,722,819
Ensembl chr  X:121,708,894...121,733,365 		JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26609159) Ensembl
MGI		 PMID:26609159 GO_REF:0000107 NCBI chr28:29,285,422...29,287,236 JBrowse link
G SAMD4B sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr 1:113,828,432...113,857,336
Ensembl chr 1:113,828,447...113,857,314 		JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:2473662) MGI PMID:2473662 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869 		JBrowse link
G ATXN2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chr26:9,073,667...9,188,429
Ensembl chr26:9,073,809...9,188,414 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163)
(PMID:10630211)
(PMID:7834360)		 MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20153830) Ensembl
MGI		 PMID:20153830 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G FOXP2 forkhead box P2 involved_in ISO (PMID:22133810) MGI PMID:22133810 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20041218) Ensembl
MGI		 PMID:20041218 GO_REF:0000107 NCBI chr30:28,195,296...28,379,343
Ensembl chr30:28,195,673...28,379,444 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chr 4:22,571,095...22,603,880
Ensembl chr 4:22,572,153...22,603,848 		JBrowse link
G RORA RAR related orphan receptor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8996814) Ensembl
MGI		 PMID:8996814 GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600)
(PMID:24491816)		 MGI PMID:21937600 PMID:24491816 NCBI chr 7:44,250,822...44,289,737 JBrowse link
G SLC25A46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chr 3:1,700,310...1,715,841
Ensembl chr 3:1,702,905...1,756,025 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30420556) Ensembl
MGI		 PMID:30420556 GO_REF:0000107 NCBI chr10:22,456,150...22,492,375
Ensembl chr10:22,456,146...22,488,505 		JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16906134) Ensembl
MGI		 PMID:16906134 GO_REF:0000107 NCBI chr 5:76,288,780...76,343,262
Ensembl chr 5:76,288,782...76,343,207 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205)
(PMID:20577052)		 MGI PMID:16625205 PMID:20577052 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19265195) Ensembl
MGI		 PMID:19265195 GO_REF:0000107 NCBI chr15:16,272,051...16,281,028
Ensembl chr15:16,255,986...16,281,165 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163) MGI PMID:1306163 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257 		JBrowse link
G KLHL1 kelch like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17005861) Ensembl
MGI		 PMID:17005861 GO_REF:0000107 NCBI chr22:24,190,862...24,554,451
Ensembl chr22:24,191,778...24,555,120 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17712420) Ensembl
MGI		 PMID:17712420 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G SEZ6 seizure related 6 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16814779) Ensembl
MGI		 PMID:16814779 GO_REF:0000107 NCBI chr 9:43,120,316...43,165,929
Ensembl chr 9:43,121,017...43,165,762 		JBrowse link
G SEZ6L seizure related 6 homolog like acts_upstream_of_or_within ISO (PMID:16814779) MGI PMID:16814779 NCBI chr26:19,889,913...20,079,305
Ensembl chr26:19,888,319...20,076,021 		JBrowse link
G SEZ6L2 seizure related 6 homolog like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16814779) Ensembl
MGI		 PMID:16814779 GO_REF:0000107 NCBI chr 6:17,920,413...17,938,382
Ensembl chr 6:17,921,311...17,945,738 		JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17954912) Ensembl
MGI		 PMID:17954912 GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864 		JBrowse link
G WHRN whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,617,383...68,699,824
Ensembl chr11:68,617,377...68,699,977 		JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARCN1 archain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20502676) Ensembl
MGI		 PMID:20502676 GO_REF:0000107 NCBI chr 5:15,141,861...15,171,642
Ensembl chr 5:15,143,499...15,171,586 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:17409239) MGI PMID:17409239 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G COQ8B coenzyme Q8B involved_in ISO (PMID:27499294) UniProt PMID:27499294 NCBI chr 1:113,056,369...113,075,773
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20231455) Ensembl
MGI		 PMID:20231455 GO_REF:0000107 NCBI chr18:50,631,053...50,670,428
Ensembl chr18:50,631,909...50,669,916 		JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:23688253) UniProt PMID:23688253 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:7182074 RGD:10047093 NCBI chr 6:33,385,779...33,471,348
Ensembl chr 6:33,376,996...33,471,326 		JBrowse link
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr36:3,534,231...3,583,310
Ensembl chr36:3,541,248...3,613,384 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G AIF1 allograft inflammatory factor 1 ISO RGD PMID:9698327 RGD:704401 NCBI chr12:1,104,350...1,106,179
Ensembl chr12:1,104,394...1,106,177 		JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132 		JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 ISO RGD PMID:12843293 RGD:1299593 NCBI chr27:7,507,426...7,510,015
Ensembl chr27:7,507,489...7,509,054 		JBrowse link
G ARHGAP32 Rho GTPase activating protein 32 ISO RGD PMID:23226367 RGD:151665335 NCBI chr 5:5,398,833...5,690,041
Ensembl chr 5:5,380,831...5,686,840 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:16880690) MGI PMID:16880690 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G ATRN attractin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18064672) Ensembl
MGI		 PMID:18064672 GO_REF:0000107 NCBI chr24:17,698,238...17,859,810
Ensembl chr24:17,702,282...17,859,737 		JBrowse link
G CCR1 chemokine (C-C motif) receptor 1 ISO RGD PMID:12541321 RGD:5688179 NCBI chr20:42,421,356...42,427,177
Ensembl chr20:42,421,356...42,426,958 		JBrowse link
G CD3E CD3 epsilon subunit of T-cell receptor complex involved_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chr 5:15,403,724...15,415,259
Ensembl chr 5:15,403,710...15,415,260 		JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11226314) Ensembl
MGI		 PMID:11226314 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11517264)
(PMID:11226314)		 Ensembl
MGI		 PMID:11226314 PMID:11517264 GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A ISO RGD PMID:9693786 RGD:8552681 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:25,782,012...25,783,897 JBrowse link
G CNTN1 contactin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18354028) Ensembl
MGI		 PMID:18354028 GO_REF:0000107 NCBI chr27:12,655,021...13,005,536
Ensembl chr27:12,657,287...12,920,315 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25877302) Ensembl
MGI		 PMID:25877302 GO_REF:0000107 NCBI chr 4:71,435,994...71,567,567
Ensembl chr 4:71,430,575...71,567,267 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16820012 RGD:5131267 NCBI chr14:43,366,849...43,414,398
Ensembl chr14:43,368,340...43,415,142 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:16329132 RGD:1599699 NCBI chr30:37,474,997...37,487,028
Ensembl chr30:37,473,901...37,487,507 		JBrowse link
G EN1 engrailed homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:16542644 RGD:1601098 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb involved_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chr38:20,980,777...20,994,403 JBrowse link
G FOXC1 forkhead box C1 involved_in ISO (PMID:19668217) UniProt PMID:19668217
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:15983371)
(PMID:17619227)		 MGI PMID:15983371 PMID:17619227 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:17983671) MGI PMID:17983671 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764 		JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16651541) Ensembl
MGI		 PMID:16651541 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GDF10 growth differentiation factor 10 ISO RGD PMID:8605043 RGD:631791 NCBI chr 4:35,008,204...35,017,476
Ensembl chr 4:35,008,983...35,018,166 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO RGD PMID:7182074 RGD:10047093 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G GPX4 glutathione peroxidase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24599700) MGI
Ensembl		 PMID:24599700 GO_REF:0000107
G HAP1 huntingtin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,065,770...21,074,462
Ensembl chr 9:21,065,846...21,072,991 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:19115409 RGD:10041070 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9764759 RGD:10059383 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21443795 PMID:23397157 RGD:10403039 RGD:12904969 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387 		JBrowse link
G INSR insulin receptor ISO RGD PMID:23397157 RGD:10403039 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046 		JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:9526005 RGD:9685724 NCBI chr21:40,273,366...40,315,189
Ensembl chr21:40,273,827...40,315,189 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1638738) Ensembl
MGI		 PMID:1638738 GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G LOC100855552 creatine kinase B-type ISO RGD PMID:12093362 RGD:625711 NCBI chr 8:71,284,104...71,287,379 JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:10,282,452...10,283,479 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 ISO RGD PMID:7057182 RGD:2301991 NCBI chr31:29,032,399...29,063,706 JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr11:65,690,806...65,822,166
Ensembl chr11:65,692,973...65,822,312 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18571096) RGD
MGI
Ensembl		 PMID:14751287 PMID:18571096 GO_REF:0000107 RGD:12743658 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in IEA Ensembl GO_REF:0000107
G MT-CO1 mitochondrially encoded cytochrome c oxidase I ISO RGD PMID:2465379 RGD:2302317 NCBI chr MT:5,349...6,893
Ensembl chr MT:5,349...6,893 		JBrowse link
G MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 ISO RGD PMID:2465379 RGD:2302317 NCBI chr MT:10,201...11,578
Ensembl chr MT:10,201...11,578 		JBrowse link
G MYO16 myosin XVI involved_in ISO PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr22:57,313,714...57,794,415
Ensembl chr22:57,198,283...57,648,949 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:10803578 PMID:15876152 RGD:2293531 RGD:5688232 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:10803578 RGD:2293531 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:10803578 RGD:2293531 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NCSTN nicastrin ISO RGD PMID:16298244 RGD:13801190 NCBI chr38:21,878,071...21,891,362
Ensembl chr38:21,685,868...21,892,097 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISO (PMID:10398678) RGD
UniProt		 PMID:10398678 PMID:12242038 RGD:1625048 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in ISO (PMID:20393820) UniProt PMID:20393820 NCBI chr20:5,041,656...5,139,859
Ensembl chr20:5,052,232...5,133,721 		JBrowse link
G NTM neurotrimin ISO RGD PMID:12373100 RGD:2314481 NCBI chr 5:2,725,902...3,658,635
Ensembl chr 5:2,725,943...3,658,311 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 ISO RGD PMID:20395366 RGD:11533946 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11688562 RGD:8552644
G PDSS2 decaprenyl diphosphate synthase subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:64,371,548...64,620,652
Ensembl chr12:64,338,950...64,620,367 		JBrowse link
G PFDN1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chr 2:35,454,139...35,519,818
Ensembl chr 2:35,454,404...35,519,725 		JBrowse link
G PIANP PILR alpha associated neural protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31511635) MGI
Ensembl		 PMID:31511635 GO_REF:0000107 NCBI chr27:38,339,720...38,342,900
Ensembl chr27:38,341,011...38,343,572 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15763176 RGD:7777107 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729 		JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:16298244 RGD:13801190 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 ISO RGD PMID:9917071 RGD:10045971 NCBI chr 6:52,870,944...52,948,673
Ensembl chr 6:52,872,310...52,949,025 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8653419 RGD:10043831 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15842738) Ensembl
MGI		 PMID:15842738 GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17558409) Ensembl
MGI		 PMID:17558409 GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:22331407 RGD:6484221 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560 		JBrowse link
G SDF4 stromal cell derived factor 4 involved_in ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:56,407,506...56,421,515
Ensembl chr 5:56,407,807...56,421,430 		JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592 		JBrowse link
G SSTR1 somatostatin receptor 1 ISO RGD PMID:9166718 RGD:2325007 NCBI chr 8:16,571,069...16,575,730 JBrowse link
G SSTR2 somatostatin receptor 2 ISO RGD PMID:9166718 RGD:2325007 NCBI chr 9:6,989,488...7,004,851
Ensembl chr 9:6,996,874...7,000,778 		JBrowse link
G SSTR3 somatostatin receptor 3 ISO RGD PMID:9166718 RGD:2325007 NCBI chr10:27,324,067...27,332,570
Ensembl chr10:27,329,174...27,330,451 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24013501) Ensembl
MGI		 PMID:24013501 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) ARUK-UCL PMID:26323690 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 7:35,123,417...35,130,349
Ensembl chr 7:35,117,209...35,129,134 		JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:11344116) MGI PMID:11344116 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20980600) Ensembl
MGI		 PMID:20980600 GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 7:20,696,659...20,735,362
Ensembl chr 7:20,700,144...20,727,410 		JBrowse link
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16160063) Ensembl
MGI		 PMID:16160063 GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:11456442) MGI PMID:11456442 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19270340) Ensembl
MGI		 PMID:19270340 GO_REF:0000107 NCBI chr 4:8,155,186...8,190,403
Ensembl chr 4:8,155,191...8,190,229 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17166916) MGI PMID:17166916 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008) MGI PMID:11029008 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr 7:44,250,822...44,289,737 JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:9338785) MGI PMID:9338785 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257 		JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD4 frizzled class receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11027399) Ensembl
MGI		 PMID:11027399 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr23:16,710,649...16,788,277
Ensembl chr23:16,710,701...16,785,541 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:8102800) MGI PMID:8102800 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8898234) Ensembl
MGI		 PMID:8898234 GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ADP ribosylation factor like GTPase 13B involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641 		JBrowse link
G FLNA filamin A ISO RGD PMID:22076441 RGD:11564351 NCBI chr  X:122,058,303...122,083,467
Ensembl chr  X:122,061,455...122,083,203 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21185282) Ensembl
MGI		 PMID:21185282 GO_REF:0000107 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
fourth ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398)
(PMID:11283949)		 MGI PMID:11283949 PMID:16481398 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
hindbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr16:36,531,754...36,943,033
Ensembl chr16:36,531,754...36,943,033 		JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9398437) Ensembl
MGI		 PMID:9398437 GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11500373) Ensembl
MGI		 PMID:11500373 GO_REF:0000107
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924 		JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB1 EPH receptor B1 ISO RGD PMID:28276447 RGD:127285619 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393 		JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:28276447 RGD:127285619 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G PHOX2B paired like homeobox 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21068058) Ensembl
MGI		 PMID:21068058 GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
hypoglossal nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2A paired like homeobox 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9115735)
(PMID:21068058)		 Ensembl
MGI		 PMID:9115735 PMID:21068058 GO_REF:0000107 NCBI chr21:25,895,628...25,900,338
Ensembl chr21:25,892,321...25,900,351 		JBrowse link
medullary reticular formation development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KAT2A lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325035) Ensembl
MGI		 PMID:17325035 GO_REF:0000107 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067 		JBrowse link
G OTX1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20816794) Ensembl
MGI		 PMID:20816794 GO_REF:0000107 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2205396) Ensembl
MGI		 PMID:2205396 GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
negative regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20153830) Ensembl
MGI		 PMID:20153830 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18573488 RGD:4889489 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736 		JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2438288) Ensembl
ARUK-UCL		 PMID:2438288 GO_REF:0000107 NCBI chr 5:32,548,591...32,553,911
Ensembl chr 5:32,549,167...32,553,504 		JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:8313466) MGI PMID:8313466 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050 		JBrowse link
positive regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGF epidermal growth factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:10027293) MGI PMID:10027293 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24062445) Ensembl
MGI		 PMID:24062445 GO_REF:0000107 NCBI chr 7:882,672...887,679
Ensembl chr 7:883,279...887,811 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:10027293) MGI PMID:10027293 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20153830) Ensembl
MGI		 PMID:20153830 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNA2 catenin alpha 2 involved_in ISO (PMID:12089526), (PMID:12123610) UniProt PMID:12089526 PMID:12123610 NCBI chr17:43,472,346...44,504,881
Ensembl chr17:43,472,923...44,557,766 		JBrowse link
G CUL5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 5:24,393,692...24,477,595
Ensembl chr 5:24,396,823...24,488,043 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:24210661)
(PMID:9338785)
(PMID:9338784)		 MGI
UniProt		 PMID:9338784 PMID:9338785 PMID:24210661 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22357600) Ensembl
MGI		 PMID:22357600 GO_REF:0000107 NCBI chr10:28,284,836...28,494,618
Ensembl chr10:28,192,683...28,489,114 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
G RNF7 ring finger protein 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr23:37,578,222...37,584,862
Ensembl chr23:37,578,273...37,584,523 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 9:23,775,349...23,809,325
Ensembl chr 9:23,776,827...23,803,994 		JBrowse link
regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr 7:44,250,822...44,289,737 JBrowse link
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
rhombomere 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16651541) Ensembl
MGI		 PMID:16651541 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7508007) Ensembl
MGI		 PMID:7508007 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
rhombomere 3 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9806922) Ensembl
MGI		 PMID:9806922 GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7508007) Ensembl
MGI		 PMID:7508007 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10230789) Ensembl
MGI		 PMID:10230789 GO_REF:0000107 NCBI chr 9:24,803,996...24,810,109
Ensembl chr 9:24,804,426...24,806,614 		JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7903221) Ensembl
MGI		 PMID:7903221 GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10230789) Ensembl
MGI		 PMID:10230789 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 4 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:8102800), (PMID:9806922)
(PMID:10529420)		 MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529420) Ensembl
MGI		 PMID:10529420 GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10230789) Ensembl
MGI		 PMID:10230789 GO_REF:0000107 NCBI chr 9:24,803,996...24,810,109
Ensembl chr 9:24,804,426...24,806,614 		JBrowse link
rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:10529420)
(PMID:8102800), (PMID:9806922)		 MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529420) Ensembl
MGI		 PMID:10529420 GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7925021) Ensembl
MGI		 PMID:7925021 GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948 		JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7903221) Ensembl
MGI		 PMID:7903221 GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 6 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7925021) Ensembl
MGI		 PMID:7925021 GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948 		JBrowse link
rhombomere development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21320481) Ensembl
MGI		 PMID:21320481 GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G HOXB3 homeobox B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21320481) Ensembl
MGI		 PMID:21320481 GO_REF:0000107 NCBI chr 9:24,810,299...24,837,434
Ensembl chr 9:24,809,739...24,836,058 		JBrowse link
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 ISO RGD PMID:21501682 RGD:8552349
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11517264) Ensembl
MGI		 PMID:11517264 GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12885554) Ensembl
MGI		 PMID:12885554 GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:8719615) MGI PMID:8719615 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:11223304) MGI PMID:11223304 NCBI chr31:29,858,428...29,868,315 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17099
    developmental process 6595
      anatomical structure development 6203
        hindbrain development 230
          cell differentiation in hindbrain + 33
          cell migration in hindbrain + 23
          cell proliferation in hindbrain + 15
          fourth ventricle development 2
          hindbrain maturation + 7
          hindbrain morphogenesis + 65
          medulla oblongata development + 5
          metencephalon development + 177
          rhombomere development + 9
Path 2
Term Annotations click to browse term
  biological_process 17099
    developmental process 6595
      anatomical structure development 6203
        multicellular organism development 5048
          system development 4376
            nervous system development 2697
              central nervous system development 1168
                brain development 882
                  hindbrain development 230
                    cell differentiation in hindbrain + 33
                    cell migration in hindbrain + 23
                    cell proliferation in hindbrain + 15
                    fourth ventricle development 2
                    hindbrain maturation + 7
                    hindbrain morphogenesis + 65
                    medulla oblongata development + 5
                    metencephalon development + 177
                    rhombomere development + 9
paths to the root