ZNF365 (zinc finger protein 365) - Rat Genome Database

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Gene: ZNF365 (zinc finger protein 365) Canis lupus familiaris
Analyze
Symbol: ZNF365
Name: zinc finger protein 365
RGD ID: 12408859
Description: INVOLVED IN cerebellar molecular layer morphogenesis (inferred); dendrite arborization (inferred); dendritic spine morphogenesis (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC106558697; uncharacterized LOC106558697
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1414,297,652 - 14,429,634 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl414,311,302 - 14,331,568 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha414,527,088 - 14,642,551 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0414,573,032 - 14,689,126 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl414,573,096 - 14,687,863 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1414,556,021 - 14,671,742 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0414,681,301 - 14,796,777 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0415,036,427 - 15,152,301 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
COVID-19  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF365
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1414,297,652 - 14,429,634 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl414,311,302 - 14,331,568 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha414,527,088 - 14,642,551 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0414,573,032 - 14,689,126 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl414,573,096 - 14,687,863 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1414,556,021 - 14,671,742 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0414,681,301 - 14,796,777 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0415,036,427 - 15,152,301 (+)NCBIUU_Cfam_GSD_1.0
ZNF365
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381062,643,643 - 62,672,010 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1062,520,448 - 62,672,011 (+)EnsemblGRCh38hg38GRCh38
GRCh371064,134,128 - 64,240,044 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361063,803,922 - 64,101,777 (+)NCBINCBI36Build 36hg18NCBI36
Celera1057,401,050 - 57,698,970 (+)NCBICelera
Cytogenetic Map10q21.2NCBI
HuRef1058,125,768 - 58,423,451 (+)NCBIHuRef
CHM1_11064,416,070 - 64,713,897 (+)NCBICHM1_1
T2T-CHM13v2.01063,501,484 - 63,529,831 (+)NCBIT2T-CHM13v2.0
Zfp365
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391067,721,935 - 67,748,492 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1067,721,933 - 67,748,492 (-)EnsemblGRCm39 Ensembl
GRCm381067,886,105 - 67,912,662 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1067,886,103 - 67,912,662 (-)EnsemblGRCm38mm10GRCm38
MGSCv371067,348,853 - 67,375,410 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361067,281,462 - 67,308,019 (-)NCBIMGSCv36mm8
MGSCv361067,936,422 - 67,962,516 (-)NCBIMGSCv36mm8
Celera1068,980,055 - 69,006,641 (-)NCBICelera
Cytogenetic Map10B5.1NCBI
cM Map1035.04NCBI
Zfp365
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82020,665,122 - 20,688,607 (+)NCBIGRCr8
mRatBN7.22020,666,240 - 20,689,734 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2020,666,240 - 20,691,238 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2021,395,013 - 21,418,499 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02020,747,627 - 20,771,114 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02021,222,748 - 21,246,240 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02022,060,160 - 22,083,766 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2022,060,224 - 22,086,108 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02024,159,323 - 24,183,062 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42021,490,528 - 21,514,845 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2022,029,753 - 22,053,277 (+)NCBICelera
Cytogenetic Map20p11NCBI
Znf365
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542515,652,373 - 15,675,336 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542515,652,373 - 15,675,255 (+)NCBIChiLan1.0ChiLan1.0
ZNF365
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2874,572,996 - 74,601,063 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11074,578,319 - 74,606,386 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01058,894,939 - 58,923,176 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11061,223,925 - 61,329,657 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1061,223,925 - 61,329,657 (+)Ensemblpanpan1.1panPan2
Znf365
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721366,746,717 - 66,767,306 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936614835,866 - 853,547 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936614833,665 - 853,547 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF365
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1465,861,564 - 65,888,335 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11465,861,398 - 65,888,341 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21470,935,090 - 70,959,967 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF365
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1968,872,683 - 68,900,911 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl968,871,827 - 68,900,724 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604829,755,750 - 29,783,958 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf365
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247911,330,794 - 1,470,973 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247911,330,869 - 1,355,248 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF365
1391 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014112827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038489547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038489553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038489561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038489569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000020684   ⟹   ENSCAFP00000019198
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl414,311,302 - 14,331,568 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845005898   ⟹   ENSCAFP00845004688
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl414,573,096 - 14,687,863 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845005914   ⟹   ENSCAFP00845004703
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl414,573,096 - 14,597,889 (+)Ensembl
RefSeq Acc Id: XM_038473001   ⟹   XP_038328929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1414,556,021 - 14,580,735 (+)NCBI
RefSeq Acc Id: XM_038473002   ⟹   XP_038328930
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1414,556,021 - 14,671,742 (+)NCBI
RefSeq Acc Id: XM_038473003   ⟹   XP_038328931
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1414,556,021 - 14,577,784 (+)NCBI
RefSeq Acc Id: XM_038473004   ⟹   XP_038328932
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1414,556,021 - 14,577,830 (+)NCBI
RefSeq Acc Id: XM_038489547   ⟹   XP_038345475
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha414,527,088 - 14,551,799 (+)NCBI
RefSeq Acc Id: XM_038489553   ⟹   XP_038345481
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha414,527,088 - 14,642,551 (+)NCBI
RefSeq Acc Id: XM_038489561   ⟹   XP_038345489
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha414,527,088 - 14,548,848 (+)NCBI
RefSeq Acc Id: XM_038489569   ⟹   XP_038345497
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha414,527,088 - 14,548,892 (+)NCBI
RefSeq Acc Id: XM_038534043   ⟹   XP_038389971
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0415,036,427 - 15,061,150 (+)NCBI
RefSeq Acc Id: XM_038534044   ⟹   XP_038389972
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0415,036,427 - 15,152,301 (+)NCBI
RefSeq Acc Id: XM_038534045   ⟹   XP_038389973
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0415,036,427 - 15,058,199 (+)NCBI
RefSeq Acc Id: XM_038534046   ⟹   XP_038389974
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0415,036,427 - 15,058,245 (+)NCBI
RefSeq Acc Id: XM_038598362   ⟹   XP_038454290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0414,681,301 - 14,705,991 (+)NCBI
RefSeq Acc Id: XM_038598363   ⟹   XP_038454291
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0414,681,301 - 14,796,777 (+)NCBI
RefSeq Acc Id: XM_038598364   ⟹   XP_038454292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0414,681,301 - 14,703,040 (+)NCBI
RefSeq Acc Id: XM_038598365   ⟹   XP_038454293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0414,681,301 - 14,703,084 (+)NCBI
RefSeq Acc Id: XM_038662664   ⟹   XP_038518592
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0414,573,032 - 14,597,897 (+)NCBI
RefSeq Acc Id: XM_038662665   ⟹   XP_038518593
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0414,573,032 - 14,689,126 (+)NCBI
RefSeq Acc Id: XM_038662666   ⟹   XP_038518594
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0414,573,032 - 14,594,950 (+)NCBI
RefSeq Acc Id: XM_038662667   ⟹   XP_038518595
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0414,573,032 - 14,594,994 (+)NCBI
Ensembl Acc Id: ENSCAFP00000019198   ⟸   ENSCAFT00000020684
RefSeq Acc Id: XP_038328930   ⟸   XM_038473002
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038328929   ⟸   XM_038473001
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038328932   ⟸   XM_038473004
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038328931   ⟸   XM_038473003
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038454291   ⟸   XM_038598363
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038454290   ⟸   XM_038598362
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038454293   ⟸   XM_038598365
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038454292   ⟸   XM_038598364
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038518593   ⟸   XM_038662665
- Peptide Label: isoform X4
- UniProtKB: A0A8I3MJX2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038518592   ⟸   XM_038662664
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RFR1 (UniProtKB/TrEMBL),   A0A8I3MSD9 (UniProtKB/TrEMBL),   A0A8C0LR30 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038518595   ⟸   XM_038662667
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038518594   ⟸   XM_038662666
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038345481   ⟸   XM_038489553
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038345475   ⟸   XM_038489547
- Peptide Label: isoform X1
- UniProtKB: A0A8P0NF25 (UniProtKB/TrEMBL),   A0A8C0LR30 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038345497   ⟸   XM_038489569
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038345489   ⟸   XM_038489561
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038389972   ⟸   XM_038534044
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038389971   ⟸   XM_038534043
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LR30 (UniProtKB/TrEMBL),   A0A8C0Q3Y1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038389974   ⟸   XM_038534046
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038389973   ⟸   XM_038534045
- Peptide Label: isoform X2
Ensembl Acc Id: ENSCAFP00845004688   ⟸   ENSCAFT00845005898
Ensembl Acc Id: ENSCAFP00845004703   ⟸   ENSCAFT00845005914


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000013039 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030008610 UniProtKB/TrEMBL
  ENSCAFG00040001906 UniProtKB/TrEMBL
  ENSCAFG00845003326 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000020684.5 UniProtKB/TrEMBL
  ENSCAFT00030015828.1 UniProtKB/TrEMBL
  ENSCAFT00040003602.1 UniProtKB/TrEMBL
  ENSCAFT00845005898 ENTREZGENE
  ENSCAFT00845005898.1 UniProtKB/TrEMBL
  ENSCAFT00845005914 ENTREZGENE
  ENSCAFT00845005914.1 UniProtKB/TrEMBL
InterPro GenomicStab_NeuMorph_Reg UniProtKB/TrEMBL
NCBI Gene ZNF365 ENTREZGENE
PANTHER PROTEIN ZNF365 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
UniProt A0A8C0LR30 ENTREZGENE
  A0A8C0Q3Y1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RFR1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MJX2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MSD9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NF25 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:48710 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-11-21 ZNF365  zinc finger protein 365  LOC106558697  uncharacterized LOC106558697  Data merged from RGD:12121923 737654 PROVISIONAL