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ONTOLOGY REPORT - ANNOTATIONS


Term:rhombomere 5 development
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Accession:GO:0021571 term browser browse the term
Definition:The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.


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rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (MGI:1346308|PMID:10529420)
(MGI:1306866|PMID:9806922), (MGI:62658|PMID:8102800)
MGI PMID:8102800 PMID:9806922 PMID:10529420 MGI:1306866 MGI:1346308 MGI:62658 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681
JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1346308|PMID:10529420) Ensembl
MGI
PMID:10529420 GO_REF:0000107 MGI:1346308 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302
JBrowse link
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within ISO (MGI:67780|PMID:7925021) MGI PMID:7925021 MGI:67780 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948
JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:64171|PMID:7903221) Ensembl
MGI
PMID:7903221 GO_REF:0000107 MGI:64171 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497
JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13863
    developmental process 6132
      anatomical structure development 5708
        rhombomere development 9
          rhombomere 5 development 4
            rhombomere 5 morphogenesis + 1
Path 2
Term Annotations click to browse term
  biological_process 13863
    developmental process 6132
      anatomical structure development 5708
        multicellular organism development 5208
          system development 4897
            nervous system development 2522
              central nervous system development 1200
                brain development 937
                  hindbrain development 218
                    rhombomere development 9
                      rhombomere 5 development 4
                        rhombomere 5 morphogenesis + 1
paths to the root