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ONTOLOGY REPORT - ANNOTATIONS

Term:pons development
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Accession:GO:0021548 term browser browse the term
Definition:The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.


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pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11027399) Ensembl
MGI		 PMID:11027399 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr23:16,710,649...16,788,277
Ensembl chr23:16,710,701...16,785,541 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:8102800) MGI PMID:8102800 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8898234) Ensembl
MGI		 PMID:8898234 GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2A paired like homeobox 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9115735)
(PMID:21068058)		 Ensembl
MGI		 PMID:9115735 PMID:21068058 GO_REF:0000107 NCBI chr21:25,895,628...25,900,338
Ensembl chr21:25,892,321...25,900,351 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:8313466) MGI PMID:8313466 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050 		JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11517264) Ensembl
MGI		 PMID:11517264 GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12885554) Ensembl
MGI		 PMID:12885554 GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:8719615) MGI PMID:8719615 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:11223304) MGI PMID:11223304 NCBI chr31:29,858,428...29,868,315 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17925
    developmental process 6840
      anatomical structure development 6424
        pons development 15
          abducens nucleus development 1
          cochlear nucleus development + 4
          facial nucleus development 3
          locus ceruleus development + 1
          pons maturation + 3
          pons morphogenesis + 0
          salivary nucleus development + 0
          superior olivary nucleus development + 2
          trigeminal motor nucleus development 0
          vestibular nucleus development 3
Path 2
Term Annotations click to browse term
  biological_process 17925
    developmental process 6840
      anatomical structure development 6424
        multicellular organism development 5184
          system development 4514
            nervous system development 2798
              central nervous system development 1204
                brain development 901
                  hindbrain development 230
                    metencephalon development 177
                      pons development 15
                        abducens nucleus development 1
                        cochlear nucleus development + 4
                        facial nucleus development 3
                        locus ceruleus development + 1
                        pons maturation + 3
                        pons morphogenesis + 0
                        salivary nucleus development + 0
                        superior olivary nucleus development + 2
                        trigeminal motor nucleus development 0
                        vestibular nucleus development 3
paths to the root