LOC106559920 (TMF1 regulated nuclear protein 1) - Rat Genome Database

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Gene: LOC106559920 (TMF1 regulated nuclear protein 1) Canis lupus familiaris
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Symbol: LOC106559920
Name: TMF1 regulated nuclear protein 1
RGD ID: 12391295
Description: ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); neural precursor cell proliferation (ortholog); regulation of cell cycle (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/arginine repetitive matrix protein 1-like; TMF-regulated nuclear protein 1; TMF1-regulated nuclear protein 1; TRNP1
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11762,290,748 - 62,309,870 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1761,804,270 - 61,824,418 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01763,463,223 - 63,482,614 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11762,216,906 - 62,218,751 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01762,256,946 - 62,276,320 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01763,016,405 - 63,035,791 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
euchromatin  (ISO)
nucleus  (ISO)

Molecular Function

References

Genomics

Variants

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Variants in LOC106559920
207 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_005295886
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01763,463,223 - 63,482,614 (+)NCBI
RefSeq Acc Id: XR_005310972
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1761,804,270 - 61,824,418 (+)NCBI
RefSeq Acc Id: XR_005338988
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11762,216,906 - 62,218,751 (+)NCBI
RefSeq Acc Id: XR_005372787
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01763,016,405 - 63,035,791 (+)NCBI
RefSeq Acc Id: XR_005406867
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01762,256,946 - 62,276,320 (+)NCBI

Additional Information

Database Acc Id Source(s)
NCBI Gene LOC106559920 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC106559920  TMF1 regulated nuclear protein 1  TRNP1  TMF1 regulated nuclear protein 1  Symbol and/or name change 5135510 APPROVED
2019-02-19 TRNP1  TMF1 regulated nuclear protein 1    TMF1-regulated nuclear protein 1  Symbol and/or name change 5135510 APPROVED
2017-09-12 TRNP1  TMF1-regulated nuclear protein 1  LOC106559920  serine/arginine repetitive matrix protein 1-like  Symbol and/or name change 5135510 APPROVED