CTNNA2 (catenin alpha 2) - Rat Genome Database

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Gene: CTNNA2 (catenin alpha 2) Canis lupus familiaris
Analyze
Symbol: CTNNA2
Name: catenin alpha 2
RGD ID: 12298480
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); brain morphogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH Complex Cortical Dysplasia with Other Brain Malformations 9 (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN basolateral plasma membrane (ortholog); extrinsic component of postsynaptic membrane (ortholog); extrinsic component of presynaptic membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: catenin (cadherin-associated protein), alpha 1, 102kDa; catenin alpha-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11743,472,346 - 44,504,881 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1743,472,923 - 44,557,766 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1743,168,024 - 44,195,314 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01744,284,748 - 45,372,518 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1744,285,152 - 45,372,443 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11743,368,220 - 44,455,587 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01743,410,252 - 44,491,113 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01743,907,412 - 44,995,361 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CTNNA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11743,472,346 - 44,504,881 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1743,472,923 - 44,557,766 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1743,168,024 - 44,195,314 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01744,284,748 - 45,372,518 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1744,285,152 - 45,372,443 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11743,368,220 - 44,455,587 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01743,410,252 - 44,491,113 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01743,907,412 - 44,995,361 (-)NCBIUU_Cfam_GSD_1.0
CTNNA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38279,185,377 - 80,648,780 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl279,185,231 - 80,648,861 (+)EnsemblGRCh38hg38GRCh38
GRCh37279,412,503 - 80,875,905 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36279,593,634 - 80,729,416 (+)NCBINCBI36Build 36hg18NCBI36
Build 34279,651,780 - 80,787,562NCBI
Celera279,568,796 - 80,704,725 (+)NCBICelera
Cytogenetic Map2p12NCBI
HuRef279,475,616 - 80,610,857 (+)NCBIHuRef
CHM1_1279,669,347 - 80,805,984 (+)NCBICHM1_1
T2T-CHM13v2.0279,185,703 - 80,649,017 (+)NCBIT2T-CHM13v2.0
Ctnna2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39676,858,620 - 77,956,798 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl676,858,620 - 77,956,682 (-)EnsemblGRCm39 Ensembl
GRCm38676,881,637 - 77,979,815 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl676,881,637 - 77,979,699 (-)EnsemblGRCm38mm10GRCm38
MGSCv37676,831,631 - 77,929,661 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36676,811,161 - 77,909,097 (-)NCBIMGSCv36mm8
Celera678,902,485 - 80,006,681 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map633.54NCBI
Ctnna2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84110,852,265 - 112,001,351 (-)NCBIGRCr8
mRatBN7.24109,294,249 - 110,443,409 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4109,293,978 - 110,443,522 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4114,699,509 - 115,849,021 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04110,474,640 - 111,624,120 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04109,094,817 - 110,244,312 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04107,880,611 - 109,042,724 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4107,881,826 - 108,008,484 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04172,586,790 - 173,745,983 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44110,747,551 - 111,922,482 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14111,016,614 - 112,035,932 (-)NCBI
Celera498,339,981 - 99,476,551 (-)NCBICelera
Cytogenetic Map4q33NCBI
Ctnna2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554245,986,073 - 6,911,826 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554245,985,170 - 7,055,830 (-)NCBIChiLan1.0ChiLan1.0
CTNNA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21245,694,150 - 46,845,852 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A45,696,905 - 46,848,605 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A79,594,694 - 80,745,885 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A81,158,206 - 82,308,244 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A81,303,559 - 82,307,258 (+)Ensemblpanpan1.1panPan2
Ctnna2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244062924,466,584 - 5,532,415 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365565,205,481 - 6,271,304 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CTNNA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl363,205,084 - 63,455,471 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1363,205,073 - 64,417,990 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2366,285,690 - 66,567,714 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CTNNA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11426,579,012 - 27,729,581 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1426,578,896 - 26,836,423 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604584,556,698 - 85,727,504 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ctnna2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474922,333,710 - 23,412,593 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474922,332,750 - 23,546,165 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CTNNA2
14604 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium
Low
Below cutoff 5 5 17 1 4 1 5 2 12 8 8 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005630499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000012888   ⟹   ENSCAFP00000011929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1743,472,923 - 43,824,645 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000012921   ⟹   ENSCAFP00000011959
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1744,184,579 - 44,504,906 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000047084   ⟹   ENSCAFP00000038083
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1743,472,923 - 44,557,766 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000076375   ⟹   ENSCAFP00000066076
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1743,473,065 - 43,835,949 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000091680   ⟹   ENSCAFP00000059887
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1743,473,237 - 44,557,766 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000091732   ⟹   ENSCAFP00000057725
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1743,473,065 - 44,557,766 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027574   ⟹   ENSCAFP00845021697
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,152 - 45,372,443 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027591   ⟹   ENSCAFP00845021710
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,152 - 44,637,861 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027612   ⟹   ENSCAFP00845021725
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,329 - 44,682,784 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027648   ⟹   ENSCAFP00845021759
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,329 - 44,648,944 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027696   ⟹   ENSCAFP00845021796
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,329 - 44,648,635 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027748   ⟹   ENSCAFP00845021836
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,329 - 44,648,635 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027798   ⟹   ENSCAFP00845021880
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,471 - 45,372,443 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027850   ⟹   ENSCAFP00845021921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,285,643 - 45,372,443 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027894   ⟹   ENSCAFP00845021957
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,993,386 - 45,331,270 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027920   ⟹   ENSCAFP00845021977
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1744,993,386 - 45,317,890 (-)Ensembl
RefSeq Acc Id: XM_038453119   ⟹   XP_038309047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1743,168,024 - 44,195,314 (-)NCBI
RefSeq Acc Id: XM_038453120   ⟹   XP_038309048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1743,168,024 - 44,195,314 (-)NCBI
RefSeq Acc Id: XM_038453121   ⟹   XP_038309049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1743,168,024 - 44,195,313 (-)NCBI
RefSeq Acc Id: XM_038453122   ⟹   XP_038309050
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1743,168,024 - 44,195,313 (-)NCBI
RefSeq Acc Id: XM_038453123   ⟹   XP_038309051
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1743,168,024 - 44,195,311 (-)NCBI
RefSeq Acc Id: XM_038453124   ⟹   XP_038309052
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1743,168,024 - 43,477,026 (-)NCBI
RefSeq Acc Id: XM_038499016   ⟹   XP_038354944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 44,400,491 (-)NCBI
RefSeq Acc Id: XM_038499017   ⟹   XP_038354945
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 44,455,587 (-)NCBI
RefSeq Acc Id: XM_038499018   ⟹   XP_038354946
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 44,455,587 (-)NCBI
RefSeq Acc Id: XM_038499019   ⟹   XP_038354947
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 44,413,343 (-)NCBI
RefSeq Acc Id: XM_038499020   ⟹   XP_038354948
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 44,400,490 (-)NCBI
RefSeq Acc Id: XM_038499021   ⟹   XP_038354949
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 44,400,490 (-)NCBI
RefSeq Acc Id: XM_038499022   ⟹   XP_038354950
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 44,317,124 (-)NCBI
RefSeq Acc Id: XM_038499023   ⟹   XP_038354951
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11743,368,220 - 43,677,382 (-)NCBI
RefSeq Acc Id: XM_038561603   ⟹   XP_038417531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,940,432 (-)NCBI
RefSeq Acc Id: XM_038561604   ⟹   XP_038417532
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,995,361 (-)NCBI
RefSeq Acc Id: XM_038561605   ⟹   XP_038417533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,995,361 (-)NCBI
RefSeq Acc Id: XM_038561606   ⟹   XP_038417534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,953,120 (-)NCBI
RefSeq Acc Id: XM_038561607   ⟹   XP_038417535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,940,431 (-)NCBI
RefSeq Acc Id: XM_038561608   ⟹   XP_038417536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,940,431 (-)NCBI
RefSeq Acc Id: XM_038561609   ⟹   XP_038417537
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,857,018 (-)NCBI
RefSeq Acc Id: XM_038561610   ⟹   XP_038417538
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01743,907,412 - 44,216,593 (-)NCBI
RefSeq Acc Id: XM_038625643   ⟹   XP_038481571
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 44,436,282 (-)NCBI
RefSeq Acc Id: XM_038625644   ⟹   XP_038481572
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 44,491,113 (-)NCBI
RefSeq Acc Id: XM_038625645   ⟹   XP_038481573
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 44,491,113 (-)NCBI
RefSeq Acc Id: XM_038625646   ⟹   XP_038481574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 44,448,845 (-)NCBI
RefSeq Acc Id: XM_038625647   ⟹   XP_038481575
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 44,436,281 (-)NCBI
RefSeq Acc Id: XM_038625648   ⟹   XP_038481576
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 44,436,281 (-)NCBI
RefSeq Acc Id: XM_038625649   ⟹   XP_038481577
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 44,353,157 (-)NCBI
RefSeq Acc Id: XM_038625650   ⟹   XP_038481578
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01743,410,252 - 43,712,822 (-)NCBI
RefSeq Acc Id: XM_038691569   ⟹   XP_038547497
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 45,317,866 (-)NCBI
RefSeq Acc Id: XM_038691570   ⟹   XP_038547498
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 45,372,518 (-)NCBI
RefSeq Acc Id: XM_038691571   ⟹   XP_038547499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 45,372,518 (-)NCBI
RefSeq Acc Id: XM_038691572   ⟹   XP_038547500
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 45,330,522 (-)NCBI
RefSeq Acc Id: XM_038691573   ⟹   XP_038547501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 45,317,865 (-)NCBI
RefSeq Acc Id: XM_038691574   ⟹   XP_038547502
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 45,317,865 (-)NCBI
RefSeq Acc Id: XM_038691575   ⟹   XP_038547503
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 45,234,462 (-)NCBI
RefSeq Acc Id: XM_038691576   ⟹   XP_038547504
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01744,284,748 - 44,594,435 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038309047 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309048 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309049 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309050 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309051 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309052 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354944 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354945 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354946 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354947 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354948 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354949 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354950 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354951 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417532 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417535 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417537 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417538 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481571 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481572 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481573 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481574 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481575 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481576 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481577 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481578 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547497 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547498 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547499 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547500 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547502 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547503 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547504 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000011929.5
  ENSCAFP00000011959.5
  ENSCAFP00000038083.3
  ENSCAFP00000057725.2
  ENSCAFP00000059887.2
  ENSCAFP00000066076.2
  ENSCAFP00000068015.1
  ENSCAFP00000068097.1
  ENSCAFP00000070049.1
  ENSCAFP00030027085.1
  ENSCAFP00030027240.1
  ENSCAFP00040010067.1
  ENSCAFP00040010122.1
  ENSCAFP00040010151.1
  ENSCAFP00040010172.1
  ENSCAFP00040010213.1
  ENSCAFP00040010267.1
  ENSCAFP00040010350.1
  ENSCAFP00040010387.1
  ENSCAFP00845021697
  ENSCAFP00845021697.1
  ENSCAFP00845021710.1
  ENSCAFP00845021725.1
  ENSCAFP00845021759
  ENSCAFP00845021759.1
  ENSCAFP00845021796.1
  ENSCAFP00845021836.1
  ENSCAFP00845021880
  ENSCAFP00845021880.1
  ENSCAFP00845021921.1
  ENSCAFP00845021957.1
  ENSCAFP00845021977.1
RefSeq Acc Id: ENSCAFP00000066076   ⟸   ENSCAFT00000076375
RefSeq Acc Id: ENSCAFP00000057725   ⟸   ENSCAFT00000091732
RefSeq Acc Id: ENSCAFP00000059887   ⟸   ENSCAFT00000091680
RefSeq Acc Id: ENSCAFP00000038083   ⟸   ENSCAFT00000047084
RefSeq Acc Id: ENSCAFP00000011959   ⟸   ENSCAFT00000012921
RefSeq Acc Id: ENSCAFP00000011929   ⟸   ENSCAFT00000012888
RefSeq Acc Id: XP_038354945   ⟸   XM_038499017
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038354946   ⟸   XM_038499018
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038354947   ⟸   XM_038499019
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038354944   ⟸   XM_038499016
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038354949   ⟸   XM_038499021
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038354948   ⟸   XM_038499020
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038354950   ⟸   XM_038499022
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038354951   ⟸   XM_038499023
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038481572   ⟸   XM_038625644
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038481573   ⟸   XM_038625645
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038481574   ⟸   XM_038625646
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038481571   ⟸   XM_038625643
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038481576   ⟸   XM_038625648
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038481575   ⟸   XM_038625647
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038481577   ⟸   XM_038625649
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038481578   ⟸   XM_038625650
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038547498   ⟸   XM_038691570
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547499   ⟸   XM_038691571
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547500   ⟸   XM_038691572
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547497   ⟸   XM_038691569
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547502   ⟸   XM_038691574
- Peptide Label: isoform X3
- UniProtKB: A0A8C0RM21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547501   ⟸   XM_038691573
- Peptide Label: isoform X2
- UniProtKB: A0A8C0Q999 (UniProtKB/TrEMBL),   A0A8I3P5T3 (UniProtKB/TrEMBL),   A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547503   ⟸   XM_038691575
- Peptide Label: isoform X4
- UniProtKB: A0A8C0QK83 (UniProtKB/TrEMBL),   A0A8I3P067 (UniProtKB/TrEMBL),   A0A8C0RM21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547504   ⟸   XM_038691576
- Peptide Label: isoform X5
- UniProtKB: A0A8I3P5I2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309047   ⟸   XM_038453119
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309048   ⟸   XM_038453120
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309050   ⟸   XM_038453122
- Peptide Label: isoform X3
- UniProtKB: A0A8C0RM21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309049   ⟸   XM_038453121
- Peptide Label: isoform X2
- UniProtKB: A0A8C0Q999 (UniProtKB/TrEMBL),   A0A8I3P5T3 (UniProtKB/TrEMBL),   A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309051   ⟸   XM_038453123
- Peptide Label: isoform X4
- UniProtKB: A0A8C0QK83 (UniProtKB/TrEMBL),   A0A8I3P067 (UniProtKB/TrEMBL),   A0A8C0RM21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309052   ⟸   XM_038453124
- Peptide Label: isoform X5
- UniProtKB: A0A8P0PEL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417532   ⟸   XM_038561604
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417533   ⟸   XM_038561605
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417534   ⟸   XM_038561606
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417531   ⟸   XM_038561603
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RLX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417536   ⟸   XM_038561608
- Peptide Label: isoform X3
- UniProtKB: A0A8C0RM21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417535   ⟸   XM_038561607
- Peptide Label: isoform X2
- UniProtKB: A0A8C0Q999 (UniProtKB/TrEMBL),   A0A8C0RLX5 (UniProtKB/TrEMBL),   A0A8I3P5T3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417537   ⟸   XM_038561609
- Peptide Label: isoform X4
- UniProtKB: A0A8C0QK83 (UniProtKB/TrEMBL),   A0A8C0RM21 (UniProtKB/TrEMBL),   A0A8I3P067 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417538   ⟸   XM_038561610
- Peptide Label: isoform X5
- UniProtKB: A0A8I3P5I2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845021836   ⟸   ENSCAFT00845027748
RefSeq Acc Id: ENSCAFP00845021697   ⟸   ENSCAFT00845027574
RefSeq Acc Id: ENSCAFP00845021977   ⟸   ENSCAFT00845027920
RefSeq Acc Id: ENSCAFP00845021957   ⟸   ENSCAFT00845027894
RefSeq Acc Id: ENSCAFP00845021710   ⟸   ENSCAFT00845027591
RefSeq Acc Id: ENSCAFP00845021796   ⟸   ENSCAFT00845027696
RefSeq Acc Id: ENSCAFP00845021759   ⟸   ENSCAFT00845027648
RefSeq Acc Id: ENSCAFP00845021725   ⟸   ENSCAFT00845027612
RefSeq Acc Id: ENSCAFP00845021921   ⟸   ENSCAFT00845027850
RefSeq Acc Id: ENSCAFP00845021880   ⟸   ENSCAFT00845027798


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000008079 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030016690 UniProtKB/TrEMBL
  ENSCAFG00040006113 UniProtKB/TrEMBL
  ENSCAFG00845015338 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000012888.5 UniProtKB/TrEMBL
  ENSCAFT00000012921.5 UniProtKB/TrEMBL
  ENSCAFT00000047084.3 UniProtKB/TrEMBL
  ENSCAFT00000076375.2 UniProtKB/TrEMBL
  ENSCAFT00000091680.2 UniProtKB/TrEMBL
  ENSCAFT00000091732.2 UniProtKB/TrEMBL
  ENSCAFT00000097011.1 UniProtKB/TrEMBL
  ENSCAFT00000098583.1 UniProtKB/TrEMBL
  ENSCAFT00000104696.1 UniProtKB/TrEMBL
  ENSCAFT00030031046.1 UniProtKB/TrEMBL
  ENSCAFT00030031215.1 UniProtKB/TrEMBL
  ENSCAFT00040011597.1 UniProtKB/TrEMBL
  ENSCAFT00040011668.1 UniProtKB/TrEMBL
  ENSCAFT00040011699.1 UniProtKB/TrEMBL
  ENSCAFT00040011722.1 UniProtKB/TrEMBL
  ENSCAFT00040011785.1 UniProtKB/TrEMBL
  ENSCAFT00040011843.1 UniProtKB/TrEMBL
  ENSCAFT00040011939.1 UniProtKB/TrEMBL
  ENSCAFT00040011983.1 UniProtKB/TrEMBL
  ENSCAFT00845027574 ENTREZGENE
  ENSCAFT00845027574.1 UniProtKB/TrEMBL
  ENSCAFT00845027591.1 UniProtKB/TrEMBL
  ENSCAFT00845027612.1 UniProtKB/TrEMBL
  ENSCAFT00845027648 ENTREZGENE
  ENSCAFT00845027648.1 UniProtKB/TrEMBL
  ENSCAFT00845027696.1 UniProtKB/TrEMBL
  ENSCAFT00845027748.1 UniProtKB/TrEMBL
  ENSCAFT00845027798 ENTREZGENE
  ENSCAFT00845027798.1 UniProtKB/TrEMBL
  ENSCAFT00845027850.1 UniProtKB/TrEMBL
  ENSCAFT00845027894.1 UniProtKB/TrEMBL
  ENSCAFT00845027920.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.250.2510 UniProtKB/TrEMBL
  Alpha-catenin/vinculin-like UniProtKB/TrEMBL
  Vinculin, Vh2 four-helix bundle UniProtKB/TrEMBL
InterPro Alpha-catenin/vinculin-like_sf UniProtKB/TrEMBL
  Alpha_catenin UniProtKB/TrEMBL
  Vinculin/catenin UniProtKB/TrEMBL
  Vinculin_CS UniProtKB/TrEMBL
NCBI Gene CTNNA2 ENTREZGENE
PANTHER ALPHA CATENIN UniProtKB/TrEMBL
  PTHR18914:SF23 UniProtKB/TrEMBL
Pfam Vinculin UniProtKB/TrEMBL
PRINTS ALPHACATENIN UniProtKB/TrEMBL
PROSITE VINCULIN_1 UniProtKB/TrEMBL
Superfamily-SCOP SSF47220 UniProtKB/TrEMBL
UniProt A0A8C0Q999 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Q9H4_CANLF UniProtKB/TrEMBL
  A0A8C0QCK3_CANLF UniProtKB/TrEMBL
  A0A8C0QFY4_CANLF UniProtKB/TrEMBL
  A0A8C0QFZ1_CANLF UniProtKB/TrEMBL
  A0A8C0QK83 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QKJ1_CANLF UniProtKB/TrEMBL
  A0A8C0QNF0_CANLF UniProtKB/TrEMBL
  A0A8C0RLX5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RM21 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NLW4_CANLF UniProtKB/TrEMBL
  A0A8I3NLZ8_CANLF UniProtKB/TrEMBL
  A0A8I3NXA6_CANLF UniProtKB/TrEMBL
  A0A8I3P067 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P1U1_CANLF UniProtKB/TrEMBL
  A0A8I3P5E3_CANLF UniProtKB/TrEMBL
  A0A8I3P5I2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P5L5_CANLF UniProtKB/TrEMBL
  A0A8I3P5T3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S1I1_CANLF UniProtKB/TrEMBL
  A0A8P0PEL1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SDB0_CANLF UniProtKB/TrEMBL
UniProt Secondary A0A8P0TJR1 UniProtKB/TrEMBL
  A0A8P0TJV2 UniProtKB/TrEMBL
  A0A8P0TNM8 UniProtKB/TrEMBL
VGNC ID VGNC:111422 ENTREZGENE