Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | ulcerative colitis | | ISO | PSMG1 (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20228799 | |
|
Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | ulcerative colitis | | ISO | PSMG1 (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20228799 | |
|
|
|
|
|
PSMG1 (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PSMG1 (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Psmg1 (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Psmg1 (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Psmg1 (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PSMG1 (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Psmg1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BRWD1 (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PSMG1 (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Psmg1 (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in PSMG1
183 total Variants |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | reproductive system | respiratory system | adipose tissue | |
High | ||||||||||||
Medium | 5 | 5 | 22 | 6 | 6 | 6 | 6 | 6 | 12 | 8 | 10 | 6 |
Low | ||||||||||||
Below cutoff |
RefSeq Transcripts | XM_022413204 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_022413205 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038443530 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038443531 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038443532 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038517942 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038581508 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038581509 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038581510 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038645891 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038645892 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038645893 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_844682 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AAEX04000031 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JAAHUQ010000318 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAQRD010000076 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAUVH010000279 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
REHQ01000031 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSCAFT00000015910 ⟹ ENSCAFP00000014718 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00000078788 ⟹ ENSCAFP00000050116 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845051793 ⟹ ENSCAFP00845040638 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845051817 ⟹ ENSCAFP00845040659 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845051865 ⟹ ENSCAFP00845040692 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845051968 ⟹ ENSCAFP00845040772 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845052278 ⟹ ENSCAFP00845041006 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_022413204 ⟹ XP_022268912 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_022413205 ⟹ XP_022268913 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_038443530 ⟹ XP_038299458 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038443531 ⟹ XP_038299459 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038443532 ⟹ XP_038299460 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038517942 ⟹ XP_038373870 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038581508 ⟹ XP_038437436 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038581509 ⟹ XP_038437437 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038581510 ⟹ XP_038437438 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038645891 ⟹ XP_038501819 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038645892 ⟹ XP_038501820 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038645893 ⟹ XP_038501821 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_844682 ⟹ XP_849775 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
Protein RefSeqs | XP_022268912 | (Get FASTA) | NCBI Sequence Viewer |
XP_022268913 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038299458 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038299459 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038299460 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038373870 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038437436 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038437437 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038437438 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038501819 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038501820 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038501821 | (Get FASTA) | NCBI Sequence Viewer | |
XP_849775 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSCAFP00000014718.3 | ||
ENSCAFP00000050116.1 | |||
ENSCAFP00030040153.1 | |||
ENSCAFP00030040254.1 | |||
ENSCAFP00030040310.1 | |||
ENSCAFP00030040373.1 | |||
ENSCAFP00030040424.1 | |||
ENSCAFP00030040517.1 | |||
ENSCAFP00030040579.1 | |||
ENSCAFP00030040658.1 | |||
ENSCAFP00030040744.1 | |||
ENSCAFP00030040768.1 | |||
ENSCAFP00040037484.1 | |||
ENSCAFP00845040638 | |||
ENSCAFP00845040638.1 | |||
ENSCAFP00845040659.1 | |||
ENSCAFP00845040692.1 | |||
ENSCAFP00845040772.1 | |||
ENSCAFP00845041006.1 |
RefSeq Acc Id: | XP_849775 ⟸ XM_844682 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LIW1 (UniProtKB/TrEMBL), A0A8C0PVZ6 (UniProtKB/TrEMBL), A0A8I3PZN2 (UniProtKB/TrEMBL), A0A8C0PW14 (UniProtKB/TrEMBL), A0A8I3Q0D2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_022268912 ⟸ XM_022413204 |
- Peptide Label: | isoform X2 |
- Sequence: |
RefSeq Acc Id: | XP_022268913 ⟸ XM_022413205 |
- Peptide Label: | isoform X2 |
- Sequence: |
RefSeq Acc Id: | ENSCAFP00000050116 ⟸ ENSCAFT00000078788 |
RefSeq Acc Id: | ENSCAFP00000014718 ⟸ ENSCAFT00000015910 |
RefSeq Acc Id: | XP_038373870 ⟸ XM_038517942 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038501819 ⟸ XM_038645891 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038501820 ⟸ XM_038645892 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038501821 ⟸ XM_038645893 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038299458 ⟸ XM_038443530 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LIW1 (UniProtKB/TrEMBL), A0A8C0PVZ6 (UniProtKB/TrEMBL), A0A8I3PZN2 (UniProtKB/TrEMBL), A0A8C0PW14 (UniProtKB/TrEMBL), A0A8I3Q0D2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038299459 ⟸ XM_038443531 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038299460 ⟸ XM_038443532 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038437436 ⟸ XM_038581508 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LIW1 (UniProtKB/TrEMBL), A0A8C0PVZ6 (UniProtKB/TrEMBL), A0A8C0PW14 (UniProtKB/TrEMBL), A0A8I3PZN2 (UniProtKB/TrEMBL), A0A8I3Q0D2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038437437 ⟸ XM_038581509 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038437438 ⟸ XM_038581510 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | ENSCAFP00845040772 ⟸ ENSCAFT00845051968 |
RefSeq Acc Id: | ENSCAFP00845041006 ⟸ ENSCAFT00845052278 |
RefSeq Acc Id: | ENSCAFP00845040638 ⟸ ENSCAFT00845051793 |
RefSeq Acc Id: | ENSCAFP00845040659 ⟸ ENSCAFT00845051817 |
RefSeq Acc Id: | ENSCAFP00845040692 ⟸ ENSCAFT00845051865 |
RGD ID: | 13688641 | ||||||||
Promoter ID: | EPDNEW_C6708 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | PSMG1_1 | ||||||||
Description: | proteasome assembly chaperone 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
Ensembl Genes | ENSCAFG00000010004 | Ensembl |
ENSCAFG00000010037 | UniProtKB/TrEMBL | |
ENSCAFG00030024430 | UniProtKB/TrEMBL | |
ENSCAFG00040021927 | UniProtKB/TrEMBL | |
ENSCAFG00845029268 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSCAFT00000015910.5 | UniProtKB/TrEMBL |
ENSCAFT00000078788.2 | UniProtKB/TrEMBL | |
ENSCAFT00030045962.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046080.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046142.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046210.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046263.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046363.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046432.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046521.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046617.1 | UniProtKB/TrEMBL | |
ENSCAFT00030046644.1 | UniProtKB/TrEMBL | |
ENSCAFT00040042972.1 | UniProtKB/TrEMBL | |
ENSCAFT00845051793 | ENTREZGENE | |
ENSCAFT00845051793.1 | UniProtKB/TrEMBL | |
ENSCAFT00845051817.1 | UniProtKB/TrEMBL | |
ENSCAFT00845051865.1 | UniProtKB/TrEMBL | |
ENSCAFT00845051968.1 | UniProtKB/TrEMBL | |
ENSCAFT00845052278.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.20.920.10 | UniProtKB/TrEMBL |
2.130.10.10 | UniProtKB/TrEMBL | |
2.30.30.1040 | UniProtKB/TrEMBL | |
InterPro | Bromodomain | UniProtKB/TrEMBL |
Bromodomain-like_sf | UniProtKB/TrEMBL | |
Bromodomain_CS | UniProtKB/TrEMBL | |
Proteasome_assmbl_chp_1 | UniProtKB/TrEMBL | |
WD40/YVTN_repeat-like_dom_sf | UniProtKB/TrEMBL | |
WD40_repeat | UniProtKB/TrEMBL | |
WD40_repeat_CS | UniProtKB/TrEMBL | |
WD40_repeat_dom_sf | UniProtKB/TrEMBL | |
NCBI Gene | PSMG1 | ENTREZGENE |
PANTHER | BROMODOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 | UniProtKB/TrEMBL |
BRWD3 | UniProtKB/TrEMBL | |
PROTEASOME ASSEMBLY CHAPERONE 1 | UniProtKB/TrEMBL | |
PTHR15069 | UniProtKB/TrEMBL | |
WD REPEAT DOMAIN 9 | UniProtKB/TrEMBL | |
Pfam | Bromodomain | UniProtKB/TrEMBL |
PAC1 | UniProtKB/TrEMBL | |
WD40 | UniProtKB/TrEMBL | |
PIRSF | Psome_chaperone-1 | UniProtKB/TrEMBL |
PRINTS | BROMODOMAIN | UniProtKB/TrEMBL |
PROSITE | BROMODOMAIN_1 | UniProtKB/TrEMBL |
BROMODOMAIN_2 | UniProtKB/TrEMBL | |
WD_REPEATS_1 | UniProtKB/TrEMBL | |
WD_REPEATS_2 | UniProtKB/TrEMBL | |
WD_REPEATS_REGION | UniProtKB/TrEMBL | |
SMART | BROMO | UniProtKB/TrEMBL |
WD40 | UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF47370 | UniProtKB/TrEMBL |
SSF50978 | UniProtKB/TrEMBL | |
UniProt | A0A8C0LIW1 | ENTREZGENE |
A0A8C0PDK3_CANLF | UniProtKB/TrEMBL | |
A0A8C0PDY3_CANLF | UniProtKB/TrEMBL | |
A0A8C0PEU7_CANLF | UniProtKB/TrEMBL | |
A0A8C0PFA8_CANLF | UniProtKB/TrEMBL | |
A0A8C0PQA1_CANLF | UniProtKB/TrEMBL | |
A0A8C0PQP2_CANLF | UniProtKB/TrEMBL | |
A0A8C0PVQ8_CANLF | UniProtKB/TrEMBL | |
A0A8C0PVZ6 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8C0PW14 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8C0RTB4_CANLF | UniProtKB/TrEMBL | |
A0A8I3PZN2 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3PZX2_CANLF | UniProtKB/TrEMBL | |
A0A8I3Q0D2 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3Q1Q2_CANLF | UniProtKB/TrEMBL | |
A0A8I3Q711_CANLF | UniProtKB/TrEMBL | |
VGNC ID | VGNC:45121 | ENTREZGENE |