AGTPBP1 (ATP/GTP binding carboxypeptidase 1) - Rat Genome Database
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Gene: AGTPBP1 (ATP/GTP binding carboxypeptidase 1) Canis lupus familiaris
Analyze
Symbol: AGTPBP1
Name: ATP/GTP binding carboxypeptidase 1
RGD ID: 12055957
Description: ENCODES a protein that exhibits metallocarboxypeptidase activity (inferred); tubulin binding (inferred); zinc ion binding (inferred); INVOLVED IN protein deglutamylation (ortholog); ASSOCIATED WITH Childhood-Onset Neurodegeneration with Cerebellar Atrophy (ortholog); Developmental Disabilities (ortholog); Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); intracellular membrane-bounded organelle (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ATP/GTP binding protein 1; cytosolic carboxypeptidase 1; LOW QUALITY PROTEIN: cytosolic carboxypeptidase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1173,853,491 - 74,030,075 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl173,887,934 - 74,107,312 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha174,616,116 - 74,795,461 (+)NCBI
ROS_Cfam_1.0174,158,469 - 74,338,565 (+)NCBI
UMICH_Zoey_3.1173,967,595 - 74,147,352 (+)NCBI
UNSW_CanFamBas_1.0173,736,759 - 73,916,152 (+)NCBI
UU_Cfam_GSD_1.0174,439,370 - 74,619,422 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
AGTPBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1173,853,491 - 74,030,075 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl173,887,934 - 74,107,312 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha174,616,116 - 74,795,461 (+)NCBI
ROS_Cfam_1.0174,158,469 - 74,338,565 (+)NCBI
UMICH_Zoey_3.1173,967,595 - 74,147,352 (+)NCBI
UNSW_CanFamBas_1.0173,736,759 - 73,916,152 (+)NCBI
UU_Cfam_GSD_1.0174,439,370 - 74,619,422 (+)NCBI
AGTPBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl985,546,539 - 85,742,029 (-)EnsemblGRCh38hg38GRCh38
GRCh38985,546,539 - 85,742,029 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37988,161,454 - 88,356,944 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36987,351,275 - 87,546,709 (-)NCBINCBI36hg18NCBI36
Build 34985,391,008 - 85,586,443NCBI
Celera958,731,693 - 58,927,167 (-)NCBI
Cytogenetic Map9q21.33NCBI
HuRef957,985,670 - 58,181,366 (-)NCBIHuRef
CHM1_1988,308,168 - 88,503,654 (-)NCBICHM1_1
A230056J06Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391359,727,990 - 59,733,037 (-)NCBIGRCm39mm39
GRCm39 Ensembl1359,593,556 - 59,733,041 (-)Ensembl
GRCm381359,580,176 - 59,585,223 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371359,681,537 - 59,686,584 (-)NCBIGRCm37mm9NCBIm37
Celera1360,505,893 - 60,641,475 (-)NCBICelera
Cytogenetic Map13B2NCBI
Agtpbp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2175,120,540 - 5,238,874 (+)NCBI
Rnor_6.0 Ensembl175,511,385 - 5,614,435 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0175,510,009 - 5,614,416 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0177,722,385 - 7,837,764 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41711,040,339 - 11,155,923 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11711,063,063 - 11,155,645 (+)NCBI
Celera175,254,268 - 5,358,824 (+)NCBICelera
Cytogenetic Map17p14NCBI
Agtpbp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554321,628,913 - 1,818,454 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554321,628,966 - 1,816,373 (+)NCBIChiLan1.0ChiLan1.0
AGTPBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1984,871,571 - 85,049,056 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl984,871,450 - 85,037,897 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0939,161,182 - 39,357,043 (+)NCBIMhudiblu_PPA_v0panPan3
Agtpbp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_ltri_2NW_024404947120,497,104 - 120,673,188 (+)NCBI
SpeTri2.0NW_0049366801,065,375 - 1,240,909 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AGTPBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1029,440,145 - 29,590,454 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11029,440,150 - 29,590,457 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21033,515,965 - 33,666,698 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AGTPBP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11296,342,193 - 96,534,981 (-)NCBI
ChlSab1.1 Ensembl1296,342,759 - 96,534,800 (-)Ensembl
Agtpbp1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248099,119,412 - 9,321,226 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6 1
Low 5 5 22 6 6 6 6 6 6 7 10 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022420582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038571145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038571206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038571268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038571324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038571349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000002116   ⟹   ENSCAFP00000001958
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl173,887,934 - 74,029,774 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000043460   ⟹   ENSCAFP00000037621
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl173,887,934 - 74,029,774 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000061849   ⟹   ENSCAFP00000052316
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl173,887,934 - 74,029,010 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000072699   ⟹   ENSCAFP00000055875
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl173,887,934 - 74,107,312 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000073637   ⟹   ENSCAFP00000066499
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl173,887,934 - 74,087,877 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000074943   ⟹   ENSCAFP00000063730
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl173,887,934 - 74,107,312 (+)Ensembl
RefSeq Acc Id: XM_022420582   ⟹   XP_022276290
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1173,853,491 - 74,030,075 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038466248   ⟹   XP_038322176
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1173,967,596 - 74,147,352 (+)NCBI
RefSeq Acc Id: XM_038466249   ⟹   XP_038322177
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1173,967,595 - 74,141,994 (+)NCBI
RefSeq Acc Id: XM_038466250   ⟹   XP_038322178
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1173,967,595 - 74,147,352 (+)NCBI
RefSeq Acc Id: XM_038466251   ⟹   XP_038322179
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1174,015,021 - 74,147,352 (+)NCBI
RefSeq Acc Id: XM_038466252   ⟹   XP_038322180
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1174,033,620 - 74,147,352 (+)NCBI
RefSeq Acc Id: XM_038526943   ⟹   XP_038382871
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0174,439,371 - 74,619,422 (+)NCBI
RefSeq Acc Id: XM_038526944   ⟹   XP_038382872
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0174,439,370 - 74,614,061 (+)NCBI
RefSeq Acc Id: XM_038526945   ⟹   XP_038382873
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0174,439,370 - 74,619,422 (+)NCBI
RefSeq Acc Id: XM_038526946   ⟹   XP_038382874
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0174,486,999 - 74,619,422 (+)NCBI
RefSeq Acc Id: XM_038526947   ⟹   XP_038382875
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0174,505,603 - 74,619,422 (+)NCBI
RefSeq Acc Id: XM_038571145   ⟹   XP_038427073
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha174,616,117 - 74,795,461 (+)NCBI
RefSeq Acc Id: XM_038571206   ⟹   XP_038427134
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha174,616,116 - 74,790,100 (+)NCBI
RefSeq Acc Id: XM_038571268   ⟹   XP_038427196
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha174,616,116 - 74,795,461 (+)NCBI
RefSeq Acc Id: XM_038571324   ⟹   XP_038427252
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha174,663,312 - 74,795,461 (+)NCBI
RefSeq Acc Id: XM_038571349   ⟹   XP_038427277
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha174,681,905 - 74,795,461 (+)NCBI
RefSeq Acc Id: XM_038591249   ⟹   XP_038447177
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0173,736,759 - 73,916,152 (+)NCBI
RefSeq Acc Id: XM_038591250   ⟹   XP_038447178
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0173,736,759 - 73,910,793 (+)NCBI
RefSeq Acc Id: XM_038591251   ⟹   XP_038447179
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0173,736,759 - 73,916,152 (+)NCBI
RefSeq Acc Id: XM_038591252   ⟹   XP_038447180
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0173,783,907 - 73,916,152 (+)NCBI
RefSeq Acc Id: XM_038591253   ⟹   XP_038447181
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0173,802,520 - 73,916,152 (+)NCBI
RefSeq Acc Id: XM_038655048   ⟹   XP_038510976
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0174,158,470 - 74,338,565 (+)NCBI
RefSeq Acc Id: XM_038655049   ⟹   XP_038510977
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0174,158,469 - 74,333,204 (+)NCBI
RefSeq Acc Id: XM_038655050   ⟹   XP_038510978
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0174,158,469 - 74,338,565 (+)NCBI
RefSeq Acc Id: XM_038655051   ⟹   XP_038510979
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0174,206,149 - 74,338,565 (+)NCBI
RefSeq Acc Id: XM_038655052   ⟹   XP_038510980
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0174,224,752 - 74,338,565 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_022276290   ⟸   XM_022420582
- Sequence:
RefSeq Acc Id: ENSCAFP00000063730   ⟸   ENSCAFT00000074943
RefSeq Acc Id: ENSCAFP00000066499   ⟸   ENSCAFT00000073637
RefSeq Acc Id: ENSCAFP00000055875   ⟸   ENSCAFT00000072699
RefSeq Acc Id: ENSCAFP00000037621   ⟸   ENSCAFT00000043460
RefSeq Acc Id: ENSCAFP00000001958   ⟸   ENSCAFT00000002116
RefSeq Acc Id: ENSCAFP00000052316   ⟸   ENSCAFT00000061849
RefSeq Acc Id: XP_038322178   ⟸   XM_038466250
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038322177   ⟸   XM_038466249
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322176   ⟸   XM_038466248
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038322179   ⟸   XM_038466251
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038322180   ⟸   XM_038466252
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038447177   ⟸   XM_038591249
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038447179   ⟸   XM_038591251
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038447178   ⟸   XM_038591250
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038447180   ⟸   XM_038591252
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038447181   ⟸   XM_038591253
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038510978   ⟸   XM_038655050
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038510977   ⟸   XM_038655049
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038510976   ⟸   XM_038655048
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038510979   ⟸   XM_038655051
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038510980   ⟸   XM_038655052
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038427196   ⟸   XM_038571268
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038427134   ⟸   XM_038571206
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038427073   ⟸   XM_038571145
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038427252   ⟸   XM_038571324
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038427277   ⟸   XM_038571349
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038382873   ⟸   XM_038526945
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038382872   ⟸   XM_038526944
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038382871   ⟸   XM_038526943
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038382874   ⟸   XM_038526946
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038382875   ⟸   XM_038526947
- Peptide Label: isoform X5
Protein Domains
Pepdidase_M14_N   Peptidase_M14

Promoters
RGD ID:13682067
Promoter ID:EPDNEW_C135
Type:single initiation site
Name:AGTPBP1_2
Description:ATP/GTP binding protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_C136  
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1173,853,221 - 73,853,281EPDNEW
RGD ID:13682069
Promoter ID:EPDNEW_C136
Type:multiple initiation site
Name:AGTPBP1_1
Description:ATP/GTP binding protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_C135  
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1173,853,543 - 73,853,603EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000001358 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000001958 UniProtKB/TrEMBL
  ENSCAFP00000037621 UniProtKB/TrEMBL
  ENSCAFP00000052316 UniProtKB/TrEMBL
  ENSCAFP00000055875 UniProtKB/TrEMBL
  ENSCAFP00000063730 UniProtKB/TrEMBL
  ENSCAFP00000066499 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000002116 UniProtKB/TrEMBL
  ENSCAFT00000043460 UniProtKB/TrEMBL
  ENSCAFT00000061849 UniProtKB/TrEMBL
  ENSCAFT00000072699 UniProtKB/TrEMBL
  ENSCAFT00000073637 UniProtKB/TrEMBL
  ENSCAFT00000074943 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Pepdidase_M14_N UniProtKB/TrEMBL
  Peptidase_M14 UniProtKB/TrEMBL
NCBI Gene AGTPBP1 ENTREZGENE
Pfam Pepdidase_M14_N UniProtKB/TrEMBL
  Peptidase_M14 UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A5F4CHJ7_CANLF UniProtKB/TrEMBL
  A0A5F4CN82_CANLF UniProtKB/TrEMBL
  A0A5F4DD53_CANLF UniProtKB/TrEMBL
  A0A5F4DMZ9_CANLF UniProtKB/TrEMBL
  F1PL04_CANLF UniProtKB/TrEMBL
  J9NSE2_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:37719 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-02-08 AGTPBP1  ATP/GTP binding carboxypeptidase 1  AGTPBP1  ATP/GTP binding protein 1  Symbol and/or name change 19259463 PROVISIONAL