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Gene: PSAP (prosaposin) Canis lupus familiaris

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Symbol:

PSAP

Name:

prosaposin

RGD ID:

12386781

Description:

ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); lipid antigen binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to reactive oxygen species (ortholog); ceramide metabolic process (ortholog); ASSOCIATED WITH atypical Gaucher's disease due to saposin C deficiency (ortholog); Atypical Krabbe Disease due to Saposin A Deficiency (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN aggresome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PSAP (prosaposin)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Psap (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Psap (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Psap (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PSAP (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Psap (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PSAP (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PSAP (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Psap (prosaposin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	22,571,095 - 22,603,880 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	22,572,153 - 22,603,848 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	22,708,767 - 22,741,495 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	22,847,636 - 22,880,854 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	22,847,638 - 22,880,795 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	22,753,725 - 22,786,399 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	22,952,336 - 22,985,298 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	23,306,841 - 23,339,591 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSAP	Dog	atypical Gaucher's disease due to saposin C deficiency		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Atypical Gaucher disease due to saposin C deficiency	ClinVar	PMID:10196694 more ...
PSAP	Dog	Atypical Krabbe Disease due to Saposin A Deficiency		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	autosomal recessive nonsyndromic deafness		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:18429043 more ...
PSAP	Dog	autosomal recessive nonsyndromic deafness 12		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:18429043 more ...
PSAP	Dog	combined saposin deficiency		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	combined saposin deficiency		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	focal segmental glomerulosclerosis		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Glomerulosclerosis and focal	ClinVar	PMID:24033266 more ...
PSAP	Dog	genetic disease		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:1350885 more ...
PSAP	Dog	Hearing Loss		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Nonsyndromic Hearing Loss and Recessive	ClinVar	PMID:18429043 more ...
PSAP	Dog	Krabbe disease		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:18429043 more ...
PSAP	Dog	late onset Parkinson's disease		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	metachromatic leukodystrophy		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Metachromatic leukodystrophy	ClinVar	PMID:10196694 more ...
PSAP	Dog	metachromatic leukodystrophy		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	metachromatic leukodystrophy		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	metachromatic leukodystrophy		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	Metachromatic Leukodystrophy due to Saposin B Deficiency		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10196694 more ...
PSAP	Dog	neuromuscular disease		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neuromuscular disease	ClinVar	PMID:11309366 more ...
PSAP	Dog	retinitis pigmentosa-deafness syndrome		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinitis pigmentosa-deafness syndrome	ClinVar	PMID:18429043 more ...
PSAP	Dog	Usher syndrome		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:18429043 more ...
PSAP	Dog	Usher syndrome		ISO	PSAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:18429043 more ...
PSAP	Dog	Usher syndrome type 1		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Usher syndrome type 1	ClinVar	PMID:18429043 more ...
PSAP	Dog	Usher Syndrome Type 1B		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinitis pigmentosa and congenital deafness	ClinVar	PMID:18429043 more ...
PSAP	Dog	Usher syndrome type 1D		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Usher syndrome type 1D	ClinVar	PMID:18429043 more ...
PSAP	Dog	Usher syndrome type 1D		ISO	PSAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Usher syndrome type 1D	ClinVar	PMID:18429043 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSAP	Dog	atypical Gaucher's disease due to saposin C deficiency	susceptibility	ISO	PSAP (Homo sapiens)	7240710		OMIM
PSAP	Dog	Atypical Krabbe Disease due to Saposin A Deficiency	susceptibility	ISO	PSAP (Homo sapiens)	7240710		OMIM
PSAP	Dog	combined saposin deficiency	susceptibility	ISO	PSAP (Homo sapiens)	7240710		OMIM
PSAP	Dog	late onset Parkinson's disease	susceptibility	ISO	PSAP (Homo sapiens)	7240710		OMIM
PSAP	Dog	Metachromatic Leukodystrophy due to Saposin B Deficiency	susceptibility	ISO	PSAP (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSAP	Dog	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway	involved_in	IEA	UniRule:UR000342797	150520179		UniProt	GO_REF:0000104
PSAP	Dog	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway	involved_in	IBA	MGI:97783 and PANTHER:PTN008518954	150520179		GO_Central	GO_REF:0000033
PSAP	Dog	antigen processing and presentation	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:14684827	MGI	PMID:14684827
PSAP	Dog	cellular response to reactive oxygen species	involved_in	ISO	Psap (Mus musculus)	9068941	PMID:23690594	ParkinsonsUK-UCL	PMID:23690594
PSAP	Dog	ceramide metabolic process	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:17353235	MGI	PMID:17353235
PSAP	Dog	ceramide metabolic process	acts_upstream_of_or_within	ISO	MGI:3521746	9068941	PMID:15345707	MGI	PMID:15345707
PSAP	Dog	cerebellar Purkinje cell differentiation	acts_upstream_of_or_within	ISO	MGI:3521746	9068941	PMID:15345707	MGI	PMID:15345707
PSAP	Dog	cochlea development	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:17167097	MGI	PMID:17167097
PSAP	Dog	corneocyte development	acts_upstream_of_or_within	ISO	MGI:1888378 and MGI:2183897	9068941	PMID:24872419	MGI	PMID:24872419
PSAP	Dog	cornified envelope assembly	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:24872419	MGI	PMID:24872419
PSAP	Dog	developmental growth	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:11105903	MGI	PMID:11105903
PSAP	Dog	epithelial cell differentiation involved in prostate gland development	involved_in	IBA	MGI:97783 and PANTHER:PTN008518954	150520179		GO_Central	GO_REF:0000033
PSAP	Dog	epithelial cell differentiation involved in prostate gland development	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:11105903	MGI	PMID:11105903
PSAP	Dog	galactosylceramide catabolic process	acts_upstream_of_or_within	ISO	MGI:2183897	9068941	PMID:11371512	MGI	PMID:11371512
PSAP	Dog	ganglioside GM1 transport to membrane	involved_in	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	gene expression	acts_upstream_of_or_within_negative_effect	ISO	Psap (Mus musculus)	9068941	PMID:27356620	MGI	PMID:27356620
PSAP	Dog	glucosylceramide metabolic process	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:17353235	MGI	PMID:17353235
PSAP	Dog	glycolipid metabolic process	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:12810822	MGI	PMID:12810822
PSAP	Dog	inclusion body assembly	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:9678511	MGI	PMID:9678511
PSAP	Dog	intracellular protein transport	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:17353235	MGI	PMID:17353235
PSAP	Dog	lipid metabolic process	involved_in	IEA	InterPro:IPR007856	150520179		InterPro	GO_REF:0000002
PSAP	Dog	lysosomal protein catabolic process	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:12813057	MGI	PMID:12813057
PSAP	Dog	lysosomal transport	involved_in	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	membrane lipid metabolic process	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:14684827	MGI	PMID:14684827
PSAP	Dog	micturition	acts_upstream_of_or_within	ISO	MGI:2183897	9068941	PMID:11371512	MGI	PMID:11371512
PSAP	Dog	myelination	acts_upstream_of_or_within	ISO	MGI:2183897	9068941	PMID:11371512	MGI	PMID:11371512
PSAP	Dog	nervous system process	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:9678511	MGI	PMID:9678511
PSAP	Dog	nervous system process	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:17353235	MGI	PMID:17353235
PSAP	Dog	neuromuscular process controlling balance	acts_upstream_of_or_within	ISO	MGI:3711720	9068941	PMID:22326583	MGI	PMID:22326583
PSAP	Dog	NK T cell differentiation	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:14684827	MGI	PMID:14684827
PSAP	Dog	positive regulation of beta-galactosidase activity	involved_in	ISO	PSAP (Homo sapiens)	9068941	PMID:1454804	CAFA	PMID:1454804
PSAP	Dog	positive regulation of hydrolase activity	acts_upstream_of_or_within	ISO	MGI:2183897	9068941	PMID:11371512	MGI	PMID:11371512
PSAP	Dog	positive regulation of MAPK cascade	involved_in	ISO	Psap (Mus musculus)	9068941	PMID:23690594	ParkinsonsUK-UCL	PMID:23690594
PSAP	Dog	prostate gland growth	involved_in	IBA	MGI:97783 and PANTHER:PTN008518954	150520179		GO_Central	GO_REF:0000033
PSAP	Dog	prostate gland growth	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:11105903	MGI	PMID:11105903
PSAP	Dog	protein secretion	acts_upstream_of_or_within	ISO	Psap (Mus musculus)	9068941	PMID:17353235	MGI	PMID:17353235
PSAP	Dog	regulation of lipid metabolic process	involved_in	IEA	UniRule:UR000342797	150520179		UniProt	GO_REF:0000104
PSAP	Dog	regulation of lipid metabolic process	acts_upstream_of_or_within	ISO	MGI:1888378 and MGI:3802531	9068941	PMID:18480170	MGI	PMID:18480170
PSAP	Dog	regulation of lipid metabolic process	involved_in	IBA	MGI:97783 and PANTHER:PTN008518954	150520179		GO_Central	GO_REF:0000033
PSAP	Dog	regulation of MAPK cascade	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:11105903	MGI	PMID:11105903
PSAP	Dog	sensory perception of sound	acts_upstream_of_or_within	ISO	MGI:3711720	9068941	PMID:22326583	MGI	PMID:22326583
PSAP	Dog	sensory perception of sound	acts_upstream_of_or_within	ISO	MGI:1888378	9068941	PMID:17167097	MGI	PMID:17167097
PSAP	Dog	sphingolipid metabolic process	involved_in	IEA	InterPro:IPR008373 and InterPro:IPR021165	150520179		InterPro	GO_REF:0000002
PSAP	Dog	sphingolipid metabolic process	acts_upstream_of_or_within	ISO	MGI:2183897	9068941	PMID:11371512	MGI	PMID:11371512
PSAP	Dog	sphingolipid metabolic process	involved_in	IEA	UniRule:UR000342797	150520179		UniProt	GO_REF:0000104
PSAP	Dog	walking behavior	acts_upstream_of_or_within	ISO	MGI:3711720	9068941	PMID:22326583	MGI	PMID:22326583

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSAP	Dog	aggresome	located_in	ISO	Psap (Mus musculus)	9068941	PMID:20498017	MGI	PMID:20498017
PSAP	Dog	cytoplasm	located_in	IEA	ARBA:ARBA00026971	150520179		UniProt	GO_REF:0000117
PSAP	Dog	extracellular region	located_in	IEA	UniProtKB-SubCell:SL-0243	150520179		UniProt	GO_REF:0000044
PSAP	Dog	extracellular region	located_in	IEA	UniProtKB-KW:KW-0964	150520179		UniProt	GO_REF:0000043
PSAP	Dog	extracellular region	located_in	IEA	UniRule:UR000342797	150520179		UniProt	GO_REF:0000104
PSAP	Dog	extracellular space	located_in	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	extracellular space	is_active_in	IBA	PANTHER:PTN000159332 more ...	150520179		GO_Central	GO_REF:0000033
PSAP	Dog	intracellular membrane-bounded organelle	located_in	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	late endosome	located_in	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	lysosome	located_in	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	lysosome	is_active_in	IBA	MGI:97783 more ...	150520179		GO_Central	GO_REF:0000033
PSAP	Dog	lysosome	located_in	IEA	UniRule:UR000342797	150520179		UniProt	GO_REF:0000104
PSAP	Dog	lysosome	located_in	IEA	InterPro:IPR008373 and InterPro:IPR021165	150520179		InterPro	GO_REF:0000002
PSAP	Dog	membrane	located_in	IEA	GO:0006665	150520179		GOC	GO_REF:0000108

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSAP	Dog	G protein-coupled receptor binding	enables	ISO	UniProtKB:O15354 and UniProtKB:O60883	9068941	PMID:23690594	ParkinsonsUK-UCL	PMID:23690594
PSAP	Dog	ganglioside GM1 binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	ganglioside GM2 binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	ganglioside GM3 binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	ganglioside GP1c binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	ganglioside GT1b binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	identical protein binding	enables	ISO	UniProtKB:P07602-1	9068941	PMID:18462685	IntAct	PMID:18462685
PSAP	Dog	identical protein binding	enables	ISO	PR:Q61207	9068941	PMID:12867159	MGI	PMID:12867159
PSAP	Dog	lipid antigen binding	enables	ISO	Psap (Mus musculus)	9068941	PMID:14684827	MGI	PMID:14684827
PSAP	Dog	phospholipid binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	protease binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	protein binding	enables	ISO	MGI:3609260	9068941	PMID:17167097	MGI	PMID:17167097
PSAP	Dog	protein binding	enables	ISO	PR:P11609	9068941	PMID:14684827	MGI	PMID:14684827
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P28799 and UniProtKB:Q99523	9068941	PMID:28541286	UniProt	PMID:28541286
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P28798	9068941	PMID:26370502	IntAct	PMID:26370502
PSAP	Dog	protein binding	enables	ISO	UniProtKB:O96006 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
PSAP	Dog	protein binding	enables	ISO	UniProtKB:O96006	9068941	PMID:16713569	IntAct	PMID:16713569
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P05067 more ...	9068941	PMID:32814053	IntAct	PMID:32814053
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P24668 and UniProtKB:P28799	9068941	PMID:26370502	UniProt	PMID:26370502
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P08F94	9068941	PMID:20709014	UniProt	PMID:20709014
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P55072	9068941	PMID:19570996	IntAct	PMID:19570996
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P28799	9068941	PMID:26370502 and PMID:33961781	IntAct	PMID:26370502 and PMID:33961781
PSAP	Dog	protein binding	enables	ISO	UniProtKB:Q99523	9068941	PMID:22431521	UniProt	PMID:22431521
PSAP	Dog	protein binding	enables	ISO	UniProtKB:P31944	9068941	PMID:24872419	IntAct	PMID:24872419
PSAP	Dog	protein homodimerization activity	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107
PSAP	Dog	scaffold protein binding	enables	IEA	UniProtKB:P07602 and ensembl:ENSP00000378394	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

PSAP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	22,571,095 - 22,603,880 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	22,572,153 - 22,603,848 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	22,708,767 - 22,741,495 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	22,847,636 - 22,880,854 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	22,847,638 - 22,880,795 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	22,753,725 - 22,786,399 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	22,952,336 - 22,985,298 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	23,306,841 - 23,339,591 (-)	NCBI		UU_Cfam_GSD_1.0

PSAP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	71,816,298 - 71,851,251 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	71,816,298 - 71,851,251 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	73,576,055 - 73,611,008 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	73,246,061 - 73,281,088 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	73,246,063 - 73,281,015	NCBI
Celera	10	66,858,625 - 66,893,657 (-)	NCBI		Celera
Cytogenetic Map	10	q22.1	NCBI
HuRef	10	67,569,822 - 67,604,837 (-)	NCBI		HuRef
CHM1_1	10	73,858,033 - 73,893,009 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	72,687,031 - 72,721,975 (-)	NCBI		T2T-CHM13v2.0

Psap
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	60,113,436 - 60,138,379 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	60,113,449 - 60,138,376 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	60,277,628 - 60,302,600 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	60,277,627 - 60,302,597 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	59,740,376 - 59,765,348 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	59,673,095 - 59,697,957 (+)	NCBI		MGSCv36	mm8
Celera	10	61,374,486 - 61,399,457 (+)	NCBI		Celera
Cytogenetic Map	10	B4	NCBI
cM Map	10	30.02	NCBI

Psap
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	28,756,951 - 28,783,422 (+)	NCBI		GRCr8
mRatBN7.2	20	28,214,229 - 28,240,501 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	28,214,271 - 28,240,498 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	29,228,797 - 29,255,391 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	28,615,101 - 28,641,697 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	29,357,562 - 29,384,161 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	29,831,302 - 29,856,876 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	29,831,314 - 29,856,875 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	31,629,564 - 31,668,605 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	27,595,048 - 27,621,574 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	27,608,847 - 27,635,374 (+)	NCBI
Celera	20	29,653,298 - 29,678,819 (+)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

Psap
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955437	19,667,252 - 19,683,669 (+)	NCBI	ChiLan1.0	ChiLan1.0

PSAP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	83,966,632 - 84,001,690 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	83,971,953 - 84,007,011 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	68,286,359 - 68,321,349 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	70,810,591 - 70,845,593 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	70,810,881 - 70,828,781 (-)	Ensembl	panpan1.1		panPan2

Psap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	58,483,085 - 58,516,521 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	6,975,770 - 7,009,136 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	6,975,844 - 7,009,460 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PSAP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	74,734,189 - 74,887,763 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	74,734,185 - 74,820,645 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	80,625,273 - 80,660,726 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PSAP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	59,440,327 - 59,474,773 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	59,440,311 - 59,474,986 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	20,084,030 - 20,118,523 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Psap
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	5,726,681 - 5,753,575 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	5,725,697 - 5,753,575 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in PSAP
442 total Variants

Assembly: CanFam3.1

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
4	22574494	22574495	G	C	snv	American Staffordshire Terrier (AS006), Lagotto Romagnolo (LR390), Bullterrier (BT012), French Bulldog (FB046)	View more Information
4	22576548	22576549	A	G	snv	Chinese indigenous dogs (DQ10)	View more Information
4	22582873	22582874	G	A	snv	American Staffordshire Terrier (AS006)	View more Information
4	22587230	22587231	G	A	snv	Wolf (WO002_732)	View more Information

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005618989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_856497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000022878 ⟹ ENSCAFP00000021252

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	22,572,153 - 22,603,848 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845008238 ⟹ ENSCAFP00845006476

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	22,847,638 - 22,880,795 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845008244 ⟹ ENSCAFP00845006480

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	22,847,638 - 22,880,762 (-)	Ensembl

RefSeq Acc Id:

XM_005618992 ⟹ XP_005619049

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	22,571,095 - 22,603,880 (-)	NCBI
Dog10K_Boxer_Tasha	4	22,708,767 - 22,741,495 (-)	NCBI

Sequence:

show sequence

CGGGGCGGGGCAGGTTTATAGCCGCCGAGGATCAGCTGACGCTCTGCATTGCAGGCTGCGGAGTCGGCGTCGCCATGTACACCCTCTGCCTCCTGGCCAGCCTCCTGGGCGCGGCTCTAGCCAGCCCT
GTCCTAGGCCTGAAAGAATGTACCAGAGGTTCAGCGGTGTGGTGCCAGAACGTGAAGACGGCGGCCGATTGCGGGGCCCTGCAGCACTGCCTGCAGACTGTGTGGAACAAGCCGACGGTGAAATCCCT
TCCCTGCGACATATGTAAAGATGTTATCACTGCAGCTGGCGACATGCTGAAAGACAATGCCACTGAGCAAGAGATCCTCGTGTACTTGGAGAAGACCTGTGACTGGCTGCCTAGTCCGAACCTGTCTG
CCTCGTGCAAGGAGGTGGTTGACTCCTACCTTCCAGTCATCCTGGACATGATTAAAGGACAAATGAGCCATCCTGGGGAGGTGTGCTCCGCTCTCAATCTCTGCGAGTCTCTTCAGAAGCACCTGGCA
GAACTGAATCACCAGAAACAGCTCGAGTCCAATAAGATCCCGGAGCTGGATGTGGCTGAGGTGGTGGCTCCCTTCATGGCCAATATCCCCCTCCTCCTGTACCCTCAGGATGGCCCCCACAGTGAGCC
CCAGCCAAAGGCTGGTGGGGATGTTTGCCAGGACTGTATCCAGATGATCACTGACATCCAGACTGCTGTAAGGACCAACTCTACCTTTGTCGAGGCCTTGGTGGACCATGCCAAGGCACAGTGTGACC
TCCTGGGGCCTGGCATCGCCGACATGTGCAAGAACTATATCAACCAGTATTCTGACATTGCTGTCCAGATGATGATGCATATGGATCAGCAACCCAAGGAGATCTGTGGCCTGGTTGGGTTCTGTGAG
CAAGCGAAGGAGATGCCCATGCAGACTCTGATCCCTGCCAAAGTGGTCTCCGAGAACGTCATCCCTGCTTTGGAACTGGTGGAGCCCATTAAGAAGGACAAGATCGAGGAGAAGACGGATGTTTACTG
CGAGATGTGCGAGTACGTGGTGAAGGAGGTGGTCAAGCTCATTGACAACAACAGAACTGAGGAAGAAATACTTAACACTTTGGACAAAGTGTGCTTGAAGTTGCCCTCGTCCTTATCCAAGGAGTGCC
AGGAGGTGGTGGACACTTATGGCTCCTCCATCCTGTCGATCCTCCTGCAGGAGGCGAGCCCTGAGTTGGTGTGCCGCATGCTCCATCTGTGCTCCTCTCAGGGGCTGCCTGTGCTGCCTGTACGTGTG
ATTAAGCCAAAGGACGGTGGCTTTTGTGAGGTATGCAAGAAGCTGGTGAGCTATTTGGACCACAACCTGGAGAAAAACAGCACGAAGCAGGAGATCCTGGCTGCCCTTGAGAAAGGCTGCAGCTTCCT
GCCTGACCCATACCAGAAGCAGTGTGATCAGTTTGTGACTGAGTACGAGCCCGTGCTGATAGAAATCCTGGTGGAGGTGATGGACCCTTCCTTCGTTTGCTTGAAAATTGGAGCCTGCCCTGCTGCCC
GTAAGCCCCTTCTGGGAACCGAGAAGTGCGTGTGGGGCCCCAGCTACTGGTGCCAGAACATGGAGGCAGCAACCCAGTGCAATGCTGTCGAGCATTGCAAACGTCACGTGTGGAACTAGGAGGGACGT
TCCATCTTGGAGAAACTGCGGCATCTTTTCCTACTTGTGTGTCTGGGGCAGTGAACACACCGATCTCTTGACTCGGTTATAAAAATAGGACCCCCTTCTCCCCTTCCTCCCTCCCTCCCTCTCCTGTC
TCTCGATTGTAGCATCGCTGTCTGTGTGGGAGGCACCTGGCCTGCAGCTGCCACTACTGCTTCACTGTCCCTTTCCTTTGCCTAGACAGGTGAGGAGGACTGTGCACTTGGAGGGCTTTCAGCCTGCC
CTTGCGCGGTGGCTACCTGGAGGCGGCGGCAATGGAGGTGGTGGGGGCCTTGGGTGCTTGTGTGAGCCAGAGCTGCTTGACAGAAGGCTCTCCATCCTCCTTGGCTGGGGCCTTGTTCTGAGCCCTCC
ACCTACCCCTAAGCATGGACCTCCCCTCTTCCTGGGCTGCTATACAGAGAAGCAAAACAAAGGCAGTTTTATAAGAAAGGCTCAGAATAATTAGACTTCTTAAAAACCACATAGTTCTCACTGGAGGG
GAAATTCAGGAAGCGGCTGCTCAGGAGGCCTGGGTGGGTCTCGGGTTTGCTGTCCCCGGGTCAACCTCTGATTCAGCTTTGCGGTGTCTTTCCTGGTGATGCCTTGTTCCGAAGTTCTGTGGGTTTGG
GTGGGAGGGGAAGAACCTTCCTGAATGTAATCTGCTAGCTCTGTGTGGAGGTCCTGTGGGCTTGGCTCGTGTGTGTGTGTGTGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGTGACTGCCTC
TTGCTTGCTCTTGTGTCCGCCCGACTGCTGAAGCCTTGCCTTGTGCATCTGTAGTGCTGCCCGGAGCCCACCTTTGCTCTGGGCGTCCCGGCCCCTTCCCCTGCGACCCCCATTTCGTTTGACCTTTA
GGTAAATGTGGATGACAAGCTCCTAAGCCTCTGGCTGTCAGGTGCAGGGTGTGCTAGGCGTGCTCTCCAGGGGCCCTGGCTGCCGCCCTGCCTCTCTCACTTGGCCACCTCTTCTGTTCACTTTAAGT
TGCCAGGAGACAGTAAGACATGCAGTTACTATTAAATAGACTTAATGACTTTTTGGTTTGTTTTGCACTAAAGTTCCTGTGATTTAACAATAAATAAAATCTGTTAACCAGA

hide sequence

RefSeq Acc Id:

XM_005618993 ⟹ XP_005619050

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	22,571,095 - 22,603,880 (-)	NCBI
Dog10K_Boxer_Tasha	4	22,708,767 - 22,741,495 (-)	NCBI

Sequence:

show sequence

CGGGGCGGGGCAGGTTTATAGCCGCCGAGGATCAGCTGACGCTCTGCATTGCAGGCTGCGGAGTCGGCGTCGCCATGTACACCCTCTGCCTCCTGGCCAGCCTCCTGGGCGCGGCTCTAGCCAGCCCT
GTCCTAGGCCTGAAAGAATGTACCAGAGGTTCAGCGGTGTGGTGCCAGAACGTGAAGACGGCGGCCGATTGCGGGGCCCTGCAGCACTGCCTGCAGACTGTGTGGAACAAGCCGACGGTGAAATCCCT
TCCCTGCGACATATGTAAAGATGTTATCACTGCAGCTGGCGACATGCTGAAAGACAATGCCACTGAGCAAGAGATCCTCGTGTACTTGGAGAAGACCTGTGACTGGCTGCCTAGTCCGAACCTGTCTG
CCTCGTGCAAGGAGGTGGTTGACTCCTACCTTCCAGTCATCCTGGACATGATTAAAGGACAAATGAGCCATCCTGGGGAGGTGTGCTCCGCTCTCAATCTCTGCGAGTCTCTTCAGAAGCACCTGGCA
GAACTGAATCACCAGAAACAGCTCGAGTCCAATAAGATCCCGGAGCTGGATGTGGCTGAGGTGGTGGCTCCCTTCATGGCCAATATCCCCCTCCTCCTGTACCCTCAGGATGGCCCCCACAGTGAGCC
CCAGCCAAAGGCTGGTGGGGATGTTTGCCAGGACTGTATCCAGATGATCACTGACATCCAGACTGCTGTAAGGACCAACTCTACCTTTGTCGAGGCCTTGGTGGACCATGCCAAGGCACAGTGTGACC
TCCTGGGGCCTGGCATCGCCGACATGTGCAAGAACTATATCAACCAGTATTCTGACATTGCTGTCCAGATGATGATGCATATGCAACCCAAGGAGATCTGTGGCCTGGTTGGGTTCTGTGAGCAAGCG
AAGGAGATGCCCATGCAGACTCTGATCCCTGCCAAAGTGGTCTCCGAGAACGTCATCCCTGCTTTGGAACTGGTGGAGCCCATTAAGAAGGACAAGATCGAGGAGAAGACGGATGTTTACTGCGAGAT
GTGCGAGTACGTGGTGAAGGAGGTGGTCAAGCTCATTGACAACAACAGAACTGAGGAAGAAATACTTAACACTTTGGACAAAGTGTGCTTGAAGTTGCCCTCGTCCTTATCCAAGGAGTGCCAGGAGG
TGGTGGACACTTATGGCTCCTCCATCCTGTCGATCCTCCTGCAGGAGGCGAGCCCTGAGTTGGTGTGCCGCATGCTCCATCTGTGCTCCTCTCAGGGGCTGCCTGTGCTGCCTGTACGTGTGATTAAG
CCAAAGGACGGTGGCTTTTGTGAGGTATGCAAGAAGCTGGTGAGCTATTTGGACCACAACCTGGAGAAAAACAGCACGAAGCAGGAGATCCTGGCTGCCCTTGAGAAAGGCTGCAGCTTCCTGCCTGA
CCCATACCAGAAGCAGTGTGATCAGTTTGTGACTGAGTACGAGCCCGTGCTGATAGAAATCCTGGTGGAGGTGATGGACCCTTCCTTCGTTTGCTTGAAAATTGGAGCCTGCCCTGCTGCCCGTAAGC
CCCTTCTGGGAACCGAGAAGTGCGTGTGGGGCCCCAGCTACTGGTGCCAGAACATGGAGGCAGCAACCCAGTGCAATGCTGTCGAGCATTGCAAACGTCACGTGTGGAACTAGGAGGGACGTTCCATC
TTGGAGAAACTGCGGCATCTTTTCCTACTTGTGTGTCTGGGGCAGTGAACACACCGATCTCTTGACTCGGTTATAAAAATAGGACCCCCTTCTCCCCTTCCTCCCTCCCTCCCTCTCCTGTCTCTCGA
TTGTAGCATCGCTGTCTGTGTGGGAGGCACCTGGCCTGCAGCTGCCACTACTGCTTCACTGTCCCTTTCCTTTGCCTAGACAGGTGAGGAGGACTGTGCACTTGGAGGGCTTTCAGCCTGCCCTTGCG
CGGTGGCTACCTGGAGGCGGCGGCAATGGAGGTGGTGGGGGCCTTGGGTGCTTGTGTGAGCCAGAGCTGCTTGACAGAAGGCTCTCCATCCTCCTTGGCTGGGGCCTTGTTCTGAGCCCTCCACCTAC
CCCTAAGCATGGACCTCCCCTCTTCCTGGGCTGCTATACAGAGAAGCAAAACAAAGGCAGTTTTATAAGAAAGGCTCAGAATAATTAGACTTCTTAAAAACCACATAGTTCTCACTGGAGGGGAAATT
CAGGAAGCGGCTGCTCAGGAGGCCTGGGTGGGTCTCGGGTTTGCTGTCCCCGGGTCAACCTCTGATTCAGCTTTGCGGTGTCTTTCCTGGTGATGCCTTGTTCCGAAGTTCTGTGGGTTTGGGTGGGA
GGGGAAGAACCTTCCTGAATGTAATCTGCTAGCTCTGTGTGGAGGTCCTGTGGGCTTGGCTCGTGTGTGTGTGTGTGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGTGACTGCCTCTTGCTT
GCTCTTGTGTCCGCCCGACTGCTGAAGCCTTGCCTTGTGCATCTGTAGTGCTGCCCGGAGCCCACCTTTGCTCTGGGCGTCCCGGCCCCTTCCCCTGCGACCCCCATTTCGTTTGACCTTTAGGTAAA
TGTGGATGACAAGCTCCTAAGCCTCTGGCTGTCAGGTGCAGGGTGTGCTAGGCGTGCTCTCCAGGGGCCCTGGCTGCCGCCCTGCCTCTCTCACTTGGCCACCTCTTCTGTTCACTTTAAGTTGCCAG
GAGACAGTAAGACATGCAGTTACTATTAAATAGACTTAATGACTTTTTGGTTTGTTTTGCACTAAAGTTCCTGTGATTTAACAATAAATAAAATCTGTTAACCAGA

hide sequence

RefSeq Acc Id:

XM_038473198 ⟹ XP_038329126

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	22,753,725 - 22,786,399 (-)	NCBI

RefSeq Acc Id:

XM_038534261 ⟹ XP_038390189

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	23,306,841 - 23,339,591 (-)	NCBI

RefSeq Acc Id:

XM_038534262 ⟹ XP_038390190

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	23,306,841 - 23,339,591 (-)	NCBI

RefSeq Acc Id:

XM_038534263 ⟹ XP_038390191

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	23,306,841 - 23,339,591 (-)	NCBI

RefSeq Acc Id:

XM_038598576 ⟹ XP_038454504

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	22,952,336 - 22,985,298 (-)	NCBI

RefSeq Acc Id:

XM_038598577 ⟹ XP_038454505

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	22,952,336 - 22,985,298 (-)	NCBI

RefSeq Acc Id:

XM_038598578 ⟹ XP_038454506

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	22,952,336 - 22,985,298 (-)	NCBI

RefSeq Acc Id:

XM_038662848 ⟹ XP_038518776

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	22,847,636 - 22,880,854 (-)	NCBI

RefSeq Acc Id:

XM_038662849 ⟹ XP_038518777

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	22,847,636 - 22,880,854 (-)	NCBI

RefSeq Acc Id:

XM_038662850 ⟹ XP_038518778

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	22,847,636 - 22,880,854 (-)	NCBI

RefSeq Acc Id:

XM_856497 ⟹ XP_861590

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	22,571,095 - 22,603,880 (-)	NCBI
Dog10K_Boxer_Tasha	4	22,708,767 - 22,741,495 (-)	NCBI

Sequence:

show sequence

CGGGGCGGGGCAGGTTTATAGCCGCCGAGGATCAGCTGACGCTCTGCATTGCAGGCTGCGGAGTCGGCGTCGCCATGTACACCCTCTGCCTCCTGGCCAGCCTCCTGGGCGCGGCTCTAGCCAGCCCT
GTCCTAGGCCTGAAAGAATGTACCAGAGGTTCAGCGGTGTGGTGCCAGAACGTGAAGACGGCGGCCGATTGCGGGGCCCTGCAGCACTGCCTGCAGACTGTGTGGAACAAGCCGACGGTGAAATCCCT
TCCCTGCGACATATGTAAAGATGTTATCACTGCAGCTGGCGACATGCTGAAAGACAATGCCACTGAGCAAGAGATCCTCGTGTACTTGGAGAAGACCTGTGACTGGCTGCCTAGTCCGAACCTGTCTG
CCTCGTGCAAGGAGGTGGTTGACTCCTACCTTCCAGTCATCCTGGACATGATTAAAGGACAAATGAGCCATCCTGGGGAGGTGTGCTCCGCTCTCAATCTCTGCGAGTCTCTTCAGAAGCACCTGGCA
GAACTGAATCACCAGAAACAGCTCGAGTCCAATAAGATCCCGGAGCTGGATGTGGCTGAGGTGGTGGCTCCCTTCATGGCCAATATCCCCCTCCTCCTGTACCCTCAGGATGGCCCCCACAGTGAGCC
CCAGCCAAAGGCTGGTGGGGATGTTTGCCAGGACTGTATCCAGATGATCACTGACATCCAGACTGCTGTAAGGACCAACTCTACCTTTGTCGAGGCCTTGGTGGACCATGCCAAGGCACAGTGTGACC
TCCTGGGGCCTGGCATCGCCGACATGTGCAAGAACTATATCAACCAGTATTCTGACATTGCTGTCCAGATGATGATGCATATGCAGGATCAGCAACCCAAGGAGATCTGTGGCCTGGTTGGGTTCTGT
GAGCAAGCGAAGGAGATGCCCATGCAGACTCTGATCCCTGCCAAAGTGGTCTCCGAGAACGTCATCCCTGCTTTGGAACTGGTGGAGCCCATTAAGAAGGACAAGATCGAGGAGAAGACGGATGTTTA
CTGCGAGATGTGCGAGTACGTGGTGAAGGAGGTGGTCAAGCTCATTGACAACAACAGAACTGAGGAAGAAATACTTAACACTTTGGACAAAGTGTGCTTGAAGTTGCCCTCGTCCTTATCCAAGGAGT
GCCAGGAGGTGGTGGACACTTATGGCTCCTCCATCCTGTCGATCCTCCTGCAGGAGGCGAGCCCTGAGTTGGTGTGCCGCATGCTCCATCTGTGCTCCTCTCAGGGGCTGCCTGTGCTGCCTGTACGT
GTGATTAAGCCAAAGGACGGTGGCTTTTGTGAGGTATGCAAGAAGCTGGTGAGCTATTTGGACCACAACCTGGAGAAAAACAGCACGAAGCAGGAGATCCTGGCTGCCCTTGAGAAAGGCTGCAGCTT
CCTGCCTGACCCATACCAGAAGCAGTGTGATCAGTTTGTGACTGAGTACGAGCCCGTGCTGATAGAAATCCTGGTGGAGGTGATGGACCCTTCCTTCGTTTGCTTGAAAATTGGAGCCTGCCCTGCTG
CCCGTAAGCCCCTTCTGGGAACCGAGAAGTGCGTGTGGGGCCCCAGCTACTGGTGCCAGAACATGGAGGCAGCAACCCAGTGCAATGCTGTCGAGCATTGCAAACGTCACGTGTGGAACTAGGAGGGA
CGTTCCATCTTGGAGAAACTGCGGCATCTTTTCCTACTTGTGTGTCTGGGGCAGTGAACACACCGATCTCTTGACTCGGTTATAAAAATAGGACCCCCTTCTCCCCTTCCTCCCTCCCTCCCTCTCCT
GTCTCTCGATTGTAGCATCGCTGTCTGTGTGGGAGGCACCTGGCCTGCAGCTGCCACTACTGCTTCACTGTCCCTTTCCTTTGCCTAGACAGGTGAGGAGGACTGTGCACTTGGAGGGCTTTCAGCCT
GCCCTTGCGCGGTGGCTACCTGGAGGCGGCGGCAATGGAGGTGGTGGGGGCCTTGGGTGCTTGTGTGAGCCAGAGCTGCTTGACAGAAGGCTCTCCATCCTCCTTGGCTGGGGCCTTGTTCTGAGCCC
TCCACCTACCCCTAAGCATGGACCTCCCCTCTTCCTGGGCTGCTATACAGAGAAGCAAAACAAAGGCAGTTTTATAAGAAAGGCTCAGAATAATTAGACTTCTTAAAAACCACATAGTTCTCACTGGA
GGGGAAATTCAGGAAGCGGCTGCTCAGGAGGCCTGGGTGGGTCTCGGGTTTGCTGTCCCCGGGTCAACCTCTGATTCAGCTTTGCGGTGTCTTTCCTGGTGATGCCTTGTTCCGAAGTTCTGTGGGTT
TGGGTGGGAGGGGAAGAACCTTCCTGAATGTAATCTGCTAGCTCTGTGTGGAGGTCCTGTGGGCTTGGCTCGTGTGTGTGTGTGTGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGTGACTGC
CTCTTGCTTGCTCTTGTGTCCGCCCGACTGCTGAAGCCTTGCCTTGTGCATCTGTAGTGCTGCCCGGAGCCCACCTTTGCTCTGGGCGTCCCGGCCCCTTCCCCTGCGACCCCCATTTCGTTTGACCT
TTAGGTAAATGTGGATGACAAGCTCCTAAGCCTCTGGCTGTCAGGTGCAGGGTGTGCTAGGCGTGCTCTCCAGGGGCCCTGGCTGCCGCCCTGCCTCTCTCACTTGGCCACCTCTTCTGTTCACTTTA
AGTTGCCAGGAGACAGTAAGACATGCAGTTACTATTAAATAGACTTAATGACTTTTTGGTTTGTTTTGCACTAAAGTTCCTGTGATTTAACAATAAATAAAATCTGTTAACCAGA

hide sequence


Protein RefSeqs	XP_005619049	(Get FASTA)	NCBI Sequence Viewer
	XP_005619050	(Get FASTA)	NCBI Sequence Viewer
	XP_038329126	(Get FASTA)	NCBI Sequence Viewer
	XP_038390189	(Get FASTA)	NCBI Sequence Viewer
	XP_038390190	(Get FASTA)	NCBI Sequence Viewer
	XP_038390191	(Get FASTA)	NCBI Sequence Viewer
	XP_038454504	(Get FASTA)	NCBI Sequence Viewer
	XP_038454505	(Get FASTA)	NCBI Sequence Viewer
	XP_038454506	(Get FASTA)	NCBI Sequence Viewer
	XP_038518776	(Get FASTA)	NCBI Sequence Viewer
	XP_038518777	(Get FASTA)	NCBI Sequence Viewer
	XP_038518778	(Get FASTA)	NCBI Sequence Viewer
	XP_861590	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000021252.5
	ENSCAFP00000074325.1
	ENSCAFP00030019336.1
	ENSCAFP00845006476
	ENSCAFP00845006476.1
	ENSCAFP00845006480.1

RefSeq Acc Id:	XP_005619050 ⟸ XM_005618993
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0R7L6 (UniProtKB/TrEMBL), A0A8I3MQM8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYTLCLLASLLGAALASPVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHP GEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPKAGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMM MHMQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIKKDKIEEKTDVYCEMCEYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASPELVCRM LHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWGPSYWCQNMEAATQC NAVEHCKRHVWN hide sequence

RefSeq Acc Id:	XP_005619049 ⟸ XM_005618992
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0N508 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYTLCLLASLLGAALASPVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCD ICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPK AGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMMMHMDQQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIKKDKIEEKTDVYCEMC EYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASPELVCRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDP YQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWGPSYWCQNMEAATQCNAVEHCKRHVWN hide sequence

RefSeq Acc Id:	XP_861590 ⟸ XM_856497
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N508 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYTLCLLASLLGAALASPVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHP GEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPKAGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMM MHMQDQQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIKKDKIEEKTDVYCEMCEYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASPELV CRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWGPSYWCQNMEAA TQCNAVEHCKRHVWN hide sequence

Ensembl Acc Id:

ENSCAFP00000021252 ⟸ ENSCAFT00000022878

RefSeq Acc Id:	XP_038329126 ⟸ XM_038473198
- Peptide Label:	isoform X1

Protein Domains

Saposin A-type Saposin B-type

RGD ID:

13682916

Promoter ID:

EPDNEW_C982

Type:

multiple initiation site

Name:

PSAP_1

Description:

prosaposin

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	22,603,835 - 22,603,895	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000014388	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030011957	UniProtKB/TrEMBL
	ENSCAFG00845004604	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000022878.5	UniProtKB/TrEMBL
	ENSCAFT00000102046.1	UniProtKB/TrEMBL
	ENSCAFT00030022167.1	UniProtKB/TrEMBL
	ENSCAFT00845008238	ENTREZGENE
	ENSCAFT00845008238.1	UniProtKB/TrEMBL
	ENSCAFT00845008244.1	UniProtKB/TrEMBL
Gene3D-CATH	Saposin-like	UniProtKB/TrEMBL
InterPro	SAP_A	UniProtKB/TrEMBL
	SapB_1	UniProtKB/TrEMBL
	SapB_2	UniProtKB/TrEMBL
	Saposin	UniProtKB/TrEMBL
	Saposin-like	UniProtKB/TrEMBL
	Saposin_chordata	UniProtKB/TrEMBL
	SaposinB_dom	UniProtKB/TrEMBL
	Sphingo_Act-Surfact_Prot	UniProtKB/TrEMBL
NCBI Gene	PSAP	ENTREZGENE
PANTHER	BCDNA.GH08312	UniProtKB/TrEMBL
	PROSAPOSIN	UniProtKB/TrEMBL
	SAPOSIN-RELATED	UniProtKB/TrEMBL
Pfam	SapA	UniProtKB/TrEMBL
	SapB_1	UniProtKB/TrEMBL
	SapB_2	UniProtKB/TrEMBL
PIRSF	Saposin	UniProtKB/TrEMBL
PRINTS	SAPOSIN	UniProtKB/TrEMBL
PROSITE	SAP_A	UniProtKB/TrEMBL
	SAP_B	UniProtKB/TrEMBL
SMART	SAPA	UniProtKB/TrEMBL
	SapB	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47862	UniProtKB/TrEMBL
UniProt	A0A8C0N508	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R7L6	ENTREZGENE
	A0A8I3MQM8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MTG1_CANLF	UniProtKB/TrEMBL
	A0A8P0NG56_CANLF	UniProtKB/TrEMBL
	A0A8P0TTI4_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:45080	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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