PIANP (PILR alpha associated neural protein) - Rat Genome Database

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Gene: PIANP (PILR alpha associated neural protein) Canis lupus familiaris
Analyze
Symbol: PIANP
Name: PILR alpha associated neural protein
RGD ID: 12109602
Description: INVOLVED IN cerebellum development (ortholog); dentate gyrus development (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Hyperphosphatemic Familial Tumoral Calcinosis 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); presynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C27H12orf53
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,339,720 - 38,342,900 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,341,011 - 38,343,572 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,270,865 - 8,277,502 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02738,692,129 - 38,698,766 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2738,691,954 - 38,698,766 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12738,565,760 - 38,572,397 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02738,607,282 - 38,613,915 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,749,789 - 7,756,425 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PIANP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,339,720 - 38,342,900 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,341,011 - 38,343,572 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,270,865 - 8,277,502 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02738,692,129 - 38,698,766 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2738,691,954 - 38,698,766 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12738,565,760 - 38,572,397 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02738,607,282 - 38,613,915 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,749,789 - 7,756,425 (-)NCBIUU_Cfam_GSD_1.0
PIANP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,692,178 - 6,700,815 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl126,693,791 - 6,700,815 (-)EnsemblGRCh38hg38GRCh38
GRCh37126,802,957 - 6,809,981 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,673,218 - 6,680,073 (-)NCBINCBI36Build 36hg18NCBI36
Celera128,419,980 - 8,426,835 (-)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef126,656,240 - 6,663,293 (-)NCBIHuRef
CHM1_1126,801,938 - 6,808,990 (-)NCBICHM1_1
T2T-CHM13v2.0126,704,146 - 6,711,170 (-)NCBIT2T-CHM13v2.0
Pianp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396124,973,683 - 124,980,059 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6124,973,657 - 124,980,059 (+)EnsemblGRCm39 Ensembl
GRCm386124,996,720 - 125,003,096 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6124,996,694 - 125,003,096 (+)EnsemblGRCm38mm10GRCm38
MGSCv376124,946,738 - 124,953,114 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366124,962,339 - 124,968,713 (+)NCBIMGSCv36mm8
Celera6126,665,975 - 126,672,405 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.17NCBI
Pianp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84159,482,678 - 159,491,085 (+)NCBIGRCr8
mRatBN7.24157,796,425 - 157,804,842 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4157,798,808 - 157,804,842 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4164,027,754 - 164,033,788 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04159,810,676 - 159,816,710 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04158,447,038 - 158,453,072 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04157,508,862 - 157,517,676 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,511,642 - 157,517,669 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04224,529,480 - 224,535,514 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44161,117,892 - 161,123,926 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14161,362,827 - 161,368,860 (+)NCBI
Celera4146,535,886 - 146,541,918 (+)NCBICelera
Cytogenetic Map4q42NCBI
Pianp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554134,309,104 - 4,314,961 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554134,309,104 - 4,314,961 (-)NCBIChiLan1.0ChiLan1.0
PIANP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21012,255,275 - 12,263,929 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11212,252,053 - 12,260,663 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0126,824,377 - 6,832,971 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1126,740,668 - 6,748,741 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,742,251 - 6,748,741 (-)Ensemblpanpan1.1panPan2
Pianp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945102,435,167 - 102,443,307 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367091,102,477 - 1,110,420 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367091,102,730 - 1,111,143 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIANP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl563,992,685 - 63,999,438 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1563,992,618 - 63,999,435 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,427,563 - 66,551,455 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PIANP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1116,727,379 - 6,736,552 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl116,728,535 - 6,736,101 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660631,489,784 - 1,498,365 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pianp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248603,396,237 - 3,400,909 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248603,396,105 - 3,417,986 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PIANP
24 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6 12
Low 5 9 1 8 5
Below cutoff 2 2 1 4 1 4 2 3 5

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005637227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022411357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022411358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038513857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038641704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038641705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038641706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000023370   ⟹   ENSCAFP00000021701
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2738,341,011 - 38,343,572 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845049534   ⟹   ENSCAFP00845038861
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2738,691,954 - 38,698,766 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845049560   ⟹   ENSCAFP00845038878
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2738,692,296 - 38,698,766 (+)Ensembl
RefSeq Acc Id: XM_038439179   ⟹   XP_038295107
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02738,692,129 - 38,698,766 (+)NCBI
RefSeq Acc Id: XM_038439180   ⟹   XP_038295108
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02738,694,080 - 38,698,766 (+)NCBI
RefSeq Acc Id: XM_038439181   ⟹   XP_038295109
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02738,694,244 - 38,698,766 (+)NCBI
RefSeq Acc Id: XM_038459748   ⟹   XP_038315676
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha278,270,865 - 8,277,502 (-)NCBI
RefSeq Acc Id: XM_038459749   ⟹   XP_038315677
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha278,270,865 - 8,275,551 (-)NCBI
RefSeq Acc Id: XM_038459750   ⟹   XP_038315678
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha278,270,865 - 8,275,387 (-)NCBI
RefSeq Acc Id: XM_038513855   ⟹   XP_038369783
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12738,565,760 - 38,572,397 (+)NCBI
RefSeq Acc Id: XM_038513856   ⟹   XP_038369784
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12738,567,711 - 38,572,397 (+)NCBI
RefSeq Acc Id: XM_038513857   ⟹   XP_038369785
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12738,567,875 - 38,572,397 (+)NCBI
RefSeq Acc Id: XM_038576609   ⟹   XP_038432537
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0277,749,789 - 7,756,425 (-)NCBI
RefSeq Acc Id: XM_038576610   ⟹   XP_038432538
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0277,749,789 - 7,754,475 (-)NCBI
RefSeq Acc Id: XM_038576611   ⟹   XP_038432539
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0277,749,789 - 7,754,311 (-)NCBI
RefSeq Acc Id: XM_038641704   ⟹   XP_038497632
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02738,607,282 - 38,613,915 (+)NCBI
RefSeq Acc Id: XM_038641705   ⟹   XP_038497633
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02738,609,229 - 38,613,915 (+)NCBI
RefSeq Acc Id: XM_038641706   ⟹   XP_038497634
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02738,609,393 - 38,613,915 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000021701   ⟸   ENSCAFT00000023370
RefSeq Acc Id: XP_038369783   ⟸   XM_038513855
RefSeq Acc Id: XP_038369784   ⟸   XM_038513856
RefSeq Acc Id: XP_038369785   ⟸   XM_038513857
RefSeq Acc Id: XP_038497632   ⟸   XM_038641704
RefSeq Acc Id: XP_038497633   ⟸   XM_038641705
RefSeq Acc Id: XP_038497634   ⟸   XM_038641706
RefSeq Acc Id: XP_038295107   ⟸   XM_038439179
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295108   ⟸   XM_038439180
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295109   ⟸   XM_038439181
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038315676   ⟸   XM_038459748
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038315677   ⟸   XM_038459749
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038315678   ⟸   XM_038459750
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038432537   ⟸   XM_038576609
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038432538   ⟸   XM_038576610
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038432539   ⟸   XM_038576611
- UniProtKB: A0A8C0JQD1 (UniProtKB/TrEMBL),   A0A8C0PC29 (UniProtKB/TrEMBL),   A0A8C0T3A4 (UniProtKB/TrEMBL),   A0A8I3PUR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845038861   ⟸   ENSCAFT00845049534
RefSeq Acc Id: ENSCAFP00845038878   ⟸   ENSCAFT00845049560
Protein Domains
AJAP1/PANP C-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014717 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030022506 UniProtKB/TrEMBL
  ENSCAFG00040017958 UniProtKB/TrEMBL
  ENSCAFG00845028055 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000023370.4 UniProtKB/TrEMBL
  ENSCAFT00000097851.1 UniProtKB/TrEMBL
  ENSCAFT00030041374.1 UniProtKB/TrEMBL
  ENSCAFT00040033144.1 UniProtKB/TrEMBL
  ENSCAFT00845049534 ENTREZGENE
  ENSCAFT00845049534.1 UniProtKB/TrEMBL
  ENSCAFT00845049560 ENTREZGENE
  ENSCAFT00845049560.1 UniProtKB/TrEMBL
InterPro AJAP1_PANP_C UniProtKB/TrEMBL
  PIANP UniProtKB/TrEMBL
NCBI Gene PIANP ENTREZGENE
PANTHER PILR ALPHA-ASSOCIATED NEURAL PROTEIN UniProtKB/TrEMBL
  PTHR32023 UniProtKB/TrEMBL
Pfam AJAP1_PANP_C UniProtKB/TrEMBL
UniProt A0A8C0JQD1 ENTREZGENE
  A0A8C0PC29 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T3A4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PUR2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S6K5_CANLF UniProtKB/TrEMBL
  A0A8P0PMG8_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:44518 ENTREZGENE