SMAD1 (SMAD family member 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: SMAD1 (SMAD family member 1) Canis lupus familiaris
Analyze
Symbol: SMAD1
Name: SMAD family member 1
RGD ID: 12122108
Description: ENCODES a protein that exhibits co-SMAD binding (inferred); DEAD/H-box RNA helicase binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); cardiac muscle cell proliferation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN heteromeric SMAD protein complex (ortholog); homomeric SMAD protein complex (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mothers against decapentaplegic homolog 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11544,093,491 - 44,171,177 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1544,095,497 - 44,170,098 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1544,485,533 - 44,563,273 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01544,761,101 - 44,839,209 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1544,763,658 - 44,839,222 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11544,034,585 - 44,112,489 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01544,121,557 - 44,199,409 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01544,386,546 - 44,464,496 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
anatomical structure morphogenesis  (IEA)
BMP signaling pathway  (IEA,ISO)
bone development  (IEA,ISO)
cardiac muscle cell proliferation  (IEA,ISO)
cardiac muscle hypertrophy in response to stress  (ISO)
cartilage development  (IEA,ISO)
cell differentiation  (IEA)
cell population proliferation  (IEA,ISO)
cellular response to organic cyclic compound  (IEA,ISO)
DNA-templated transcription  (IEA)
gamete generation  (IEA,ISO)
hindbrain development  (IEA,ISO)
homeostatic process  (IEA,ISO)
inflammatory response  (IEA)
kidney development  (ISO)
MAPK cascade  (IEA,ISO)
mesodermal cell fate commitment  (IEA,ISO)
midbrain development  (IEA,ISO)
negative regulation of cell population proliferation  (IEA,ISO)
negative regulation of muscle cell apoptotic process  (ISO)
negative regulation of muscle cell differentiation  (IEA)
ossification  (IEA)
osteoblast differentiation  (IEA)
osteoblast fate commitment  (IEA,ISO)
positive regulation of cartilage development  (IEA,ISO)
positive regulation of cell differentiation  (ISO)
positive regulation of dendrite morphogenesis  (ISO)
positive regulation of gene expression  (IEA,ISO)
positive regulation of miRNA transcription  (IEA)
positive regulation of osteoblast differentiation  (IEA,ISO)
positive regulation of sprouting angiogenesis  (IEA)
positive regulation of transcription by RNA polymerase II  (IEA,ISO)
regulation of DNA-templated transcription  (IEA)
regulation of transcription by RNA polymerase II  (IEA,ISO)
response to organonitrogen compound  (ISO)
response to xenobiotic stimulus  (ISO)
SMAD protein signal transduction  (IEA)
transcription by RNA polymerase II  (IEA,ISO)
transforming growth factor beta receptor signaling pathway  (IEA)
ureteric bud development  (IEA)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:22393057   PMID:30032202  


Genomics

Comparative Map Data
SMAD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11544,093,491 - 44,171,177 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1544,095,497 - 44,170,098 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1544,485,533 - 44,563,273 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01544,761,101 - 44,839,209 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1544,763,658 - 44,839,222 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11544,034,585 - 44,112,489 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01544,121,557 - 44,199,409 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01544,386,546 - 44,464,496 (+)NCBIUU_Cfam_GSD_1.0
SMAD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384145,480,770 - 145,559,176 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4145,481,194 - 145,559,176 (+)EnsemblGRCh38hg38GRCh38
GRCh374146,402,458 - 146,480,328 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364146,622,401 - 146,699,778 (+)NCBINCBI36Build 36hg18NCBI36
Build 344146,760,555 - 146,837,928NCBI
Celera4143,730,483 - 143,807,862 (+)NCBICelera
Cytogenetic Map4q31.21NCBI
HuRef4142,134,622 - 142,210,284 (+)NCBIHuRef
CHM1_14146,379,527 - 146,456,909 (+)NCBICHM1_1
T2T-CHM13v2.04148,798,276 - 148,874,991 (+)NCBIT2T-CHM13v2.0
Smad1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39880,065,024 - 80,126,057 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl880,065,024 - 80,126,147 (-)EnsemblGRCm39 Ensembl
GRCm38879,338,395 - 79,399,428 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl879,338,395 - 79,399,518 (-)EnsemblGRCm38mm10GRCm38
MGSCv37881,862,294 - 81,923,367 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36882,234,467 - 82,295,540 (-)NCBIMGSCv36mm8
Celera883,615,361 - 83,676,406 (-)NCBICelera
Cytogenetic Map8C1NCBI
cM Map837.56NCBI
Smad1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81945,417,430 - 45,477,962 (+)NCBIGRCr8
mRatBN7.21928,513,130 - 28,573,665 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1928,513,131 - 28,573,651 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1935,369,097 - 35,429,185 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01936,023,176 - 36,083,272 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01938,258,468 - 38,318,560 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01932,182,942 - 32,248,694 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1932,188,267 - 32,248,684 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01943,079,695 - 43,145,300 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41930,348,886 - 30,409,345 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11930,353,711 - 30,414,170 (+)NCBI
Celera1928,023,055 - 28,083,575 (+)NCBICelera
Cytogenetic Map19q11NCBI
Smad1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554281,361,085 - 1,429,948 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554281,357,398 - 1,429,521 (+)NCBIChiLan1.0ChiLan1.0
SMAD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23143,354,683 - 143,433,135 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14143,753,819 - 143,798,089 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04137,822,269 - 137,899,700 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14149,481,819 - 149,558,135 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4149,481,836 - 149,558,135 (+)Ensemblpanpan1.1panPan2
Smad1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530146,145,177 - 46,219,936 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365353,582,489 - 3,657,063 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365353,582,512 - 3,626,312 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SMAD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl882,908,527 - 82,968,994 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1882,907,557 - 82,987,909 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SMAD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1792,047,273 - 92,123,451 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl792,079,914 - 92,123,429 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603771,693,446 - 71,769,726 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Smad1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248534,444,876 - 4,502,496 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248534,415,816 - 4,503,317 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SMAD1
679 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 1 16 6 6 7 8 10 4
Low 4 6 6 6 6 5 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005629311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014119614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022403461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022403462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038688506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000012281   ⟹   ENSCAFP00000011384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1544,095,497 - 44,170,098 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845021521   ⟹   ENSCAFP00845016913
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1544,763,658 - 44,839,209 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845021530   ⟹   ENSCAFP00845016920
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1544,784,377 - 44,839,222 (+)Ensembl
RefSeq Acc Id: XM_005629311   ⟹   XP_005629368
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11544,095,760 - 44,171,177 (+)NCBI
Dog10K_Boxer_Tasha1544,487,893 - 44,563,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022403461   ⟹   XP_022259169
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11544,095,760 - 44,171,177 (+)NCBI
Dog10K_Boxer_Tasha1544,487,893 - 44,563,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022403462   ⟹   XP_022259170
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11544,093,491 - 44,171,177 (+)NCBI
Dog10K_Boxer_Tasha1544,485,533 - 44,563,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038496513   ⟹   XP_038352441
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11544,036,933 - 44,112,489 (+)NCBI
RefSeq Acc Id: XM_038496514   ⟹   XP_038352442
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11544,036,933 - 44,112,489 (+)NCBI
RefSeq Acc Id: XM_038496515   ⟹   XP_038352443
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11544,034,585 - 44,112,489 (+)NCBI
RefSeq Acc Id: XM_038558909   ⟹   XP_038414837
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01544,388,889 - 44,464,496 (+)NCBI
RefSeq Acc Id: XM_038558910   ⟹   XP_038414838
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01544,388,889 - 44,464,496 (+)NCBI
RefSeq Acc Id: XM_038558911   ⟹   XP_038414839
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01544,386,546 - 44,464,496 (+)NCBI
RefSeq Acc Id: XM_038622835   ⟹   XP_038478763
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01544,123,879 - 44,199,409 (+)NCBI
RefSeq Acc Id: XM_038622836   ⟹   XP_038478764
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01544,123,879 - 44,199,409 (+)NCBI
RefSeq Acc Id: XM_038622837   ⟹   XP_038478765
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01544,121,557 - 44,199,409 (+)NCBI
RefSeq Acc Id: XM_038688504   ⟹   XP_038544432
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01544,763,454 - 44,839,209 (+)NCBI
RefSeq Acc Id: XM_038688505   ⟹   XP_038544433
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01544,763,454 - 44,839,209 (+)NCBI
RefSeq Acc Id: XM_038688506   ⟹   XP_038544434
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01544,761,101 - 44,839,209 (+)NCBI
RefSeq Acc Id: XP_005629368   ⟸   XM_005629311
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259170   ⟸   XM_022403462
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259169   ⟸   XM_022403461
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000011384   ⟸   ENSCAFT00000012281
RefSeq Acc Id: XP_038352443   ⟸   XM_038496515
RefSeq Acc Id: XP_038352442   ⟸   XM_038496514
RefSeq Acc Id: XP_038352441   ⟸   XM_038496513
RefSeq Acc Id: XP_038478765   ⟸   XM_038622837
RefSeq Acc Id: XP_038478764   ⟸   XM_038622836
RefSeq Acc Id: XP_038478763   ⟸   XM_038622835
RefSeq Acc Id: XP_038544434   ⟸   XM_038688506
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544433   ⟸   XM_038688505
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038544432   ⟸   XM_038688504
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414839   ⟸   XM_038558911
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414838   ⟸   XM_038558910
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414837   ⟸   XM_038558909
- UniProtKB: A0A8C0LJM0 (UniProtKB/TrEMBL),   A0A8C0MGA9 (UniProtKB/TrEMBL),   A0A8C0MMS1 (UniProtKB/TrEMBL),   A0A8I3NM89 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845016920   ⟸   ENSCAFT00845021530
RefSeq Acc Id: ENSCAFP00845016913   ⟸   ENSCAFT00845021521
Protein Domains
MH1   MH2

Promoters
RGD ID:13685990
Promoter ID:EPDNEW_C4057
Type:initiation region
Name:SMAD1_1
Description:SMAD family member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11544,094,744 - 44,094,804EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007659 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030007017 UniProtKB/TrEMBL
  ENSCAFG00040005060 UniProtKB/TrEMBL
  ENSCAFG00845012104 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000012281.6 UniProtKB/TrEMBL
  ENSCAFT00000101797.1 UniProtKB/TrEMBL
  ENSCAFT00030012898.1 UniProtKB/TrEMBL
  ENSCAFT00030012953.1 UniProtKB/TrEMBL
  ENSCAFT00030013025.1 UniProtKB/TrEMBL
  ENSCAFT00040009484.1 UniProtKB/TrEMBL
  ENSCAFT00040009522.1 UniProtKB/TrEMBL
  ENSCAFT00845021521 ENTREZGENE
  ENSCAFT00845021521.1 UniProtKB/TrEMBL
  ENSCAFT00845021530 ENTREZGENE
  ENSCAFT00845021530.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.200.10 UniProtKB/TrEMBL
  3.90.520.10 UniProtKB/TrEMBL
InterPro Dwarfin UniProtKB/TrEMBL
  MAD_homology1_Dwarfin-type UniProtKB/TrEMBL
  MAD_homology_MH1 UniProtKB/TrEMBL
  SMAD-like_dom_sf UniProtKB/TrEMBL
  SMAD_dom_Dwarfin-type UniProtKB/TrEMBL
  SMAD_FHA_dom_sf UniProtKB/TrEMBL
  SMAD_MH1_sf UniProtKB/TrEMBL
KEGG Report cfa:475456 UniProtKB/TrEMBL
NCBI Gene SMAD1 ENTREZGENE
PANTHER MOTHERS AGAINST DECAPENTAPLEGIC HOMOLOG 1 UniProtKB/TrEMBL
  PTHR13703 UniProtKB/TrEMBL
Pfam MH1 UniProtKB/TrEMBL
  MH2 UniProtKB/TrEMBL
PROSITE MH1 UniProtKB/TrEMBL
  MH2 UniProtKB/TrEMBL
SMART DWA UniProtKB/TrEMBL
  DWB UniProtKB/TrEMBL
Superfamily-SCOP SSF49879 UniProtKB/TrEMBL
  SSF56366 UniProtKB/TrEMBL
UniProt A0A8C0LJM0 ENTREZGENE
  A0A8C0MGA9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MMS1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MPE9_CANLF UniProtKB/TrEMBL
  A0A8I3NLA4_CANLF UniProtKB/TrEMBL
  A0A8I3NM89 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:46518 ENTREZGENE