ATXN2 (ataxin 2) - Rat Genome Database

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Gene: ATXN2 (ataxin 2) Canis lupus familiaris
Analyze
Symbol: ATXN2
Name: ataxin 2
RGD ID: 12160340
Description: ENCODES a protein that exhibits DNA binding domain binding (ortholog); epidermal growth factor receptor binding (ortholog); protein C-terminus binding (ortholog); INVOLVED IN cerebellar Purkinje cell differentiation (ortholog); homeostasis of number of cells (ortholog); negative regulation of multicellular organism growth (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); late onset Parkinson's disease (ortholog); open-angle glaucoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ataxin-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1269,073,667 - 9,188,429 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl269,073,809 - 9,188,414 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha269,236,242 - 9,351,196 (-)NCBI
ROS_Cfam_1.0269,333,114 - 9,448,244 (-)NCBI
UMICH_Zoey_3.1269,289,083 - 9,404,017 (-)NCBI
UNSW_CanFamBas_1.0269,351,063 - 9,466,629 (-)NCBI
UU_Cfam_GSD_1.0269,304,823 - 9,419,816 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
ATXN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1269,073,667 - 9,188,429 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl269,073,809 - 9,188,414 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha269,236,242 - 9,351,196 (-)NCBI
ROS_Cfam_1.0269,333,114 - 9,448,244 (-)NCBI
UMICH_Zoey_3.1269,289,083 - 9,404,017 (-)NCBI
UNSW_CanFamBas_1.0269,351,063 - 9,466,629 (-)NCBI
UU_Cfam_GSD_1.0269,304,823 - 9,419,816 (-)NCBI
ATXN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl12111,443,485 - 111,599,676 (-)EnsemblGRCh38hg38GRCh38
GRCh3812111,452,214 - 111,599,673 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3712111,890,018 - 112,037,477 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612110,374,401 - 110,521,863 (-)NCBINCBI36hg18NCBI36
Build 3412110,352,737 - 110,500,200NCBI
Celera12111,516,452 - 111,663,853 (-)NCBI
Cytogenetic Map12q24.12NCBI
HuRef12108,904,559 - 109,051,670 (-)NCBIHuRef
CHM1_112111,857,982 - 112,005,420 (-)NCBICHM1_1
Atxn2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395121,849,672 - 121,954,372 (+)NCBIGRCm39mm39
GRCm39 Ensembl5121,849,400 - 121,954,556 (+)Ensembl
GRCm385121,711,609 - 121,814,950 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5121,711,337 - 121,816,493 (+)EnsemblGRCm38mm10GRCm38
MGSCv375122,161,618 - 122,264,959 (+)NCBIGRCm37mm9NCBIm37
MGSCv365121,972,226 - 122,075,325 (+)NCBImm8
Celera5118,835,912 - 118,905,112 (+)NCBICelera
Cytogenetic Map5FNCBI
Atxn2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21234,754,132 - 34,851,175 (-)NCBI
Rnor_6.0 Ensembl1240,266,662 - 40,332,612 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01240,264,601 - 40,335,637 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01242,137,228 - 42,206,238 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41235,962,308 - 36,009,114 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11235,822,590 - 35,875,779 (-)NCBI
Celera1236,417,282 - 36,487,757 (-)NCBICelera
Cytogenetic Map12q16NCBI
Atxn2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554828,101,917 - 8,216,219 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554828,101,410 - 8,187,815 (-)NCBIChiLan1.0ChiLan1.0
ATXN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112112,419,337 - 112,565,096 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12112,419,337 - 112,566,360 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012109,024,620 - 109,174,135 (-)NCBIMhudiblu_PPA_v0panPan3
Atxn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118155,291,141 - 155,351,949 (+)NCBI
SpeTri2.0NW_0049365584,127,477 - 4,188,307 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATXN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1432,656,558 - 32,771,813 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11432,656,537 - 32,772,082 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21434,652,086 - 34,767,878 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATXN2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111106,704,532 - 106,860,450 (-)NCBI
ChlSab1.1 Ensembl11106,705,127 - 106,859,337 (-)Ensembl
Atxn2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474720,603,319 - 20,728,346 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 5 12 10 6
Low 1 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014107737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038436691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038511608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000013645   ⟹   ENSCAFP00000012622
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl269,073,809 - 9,188,414 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000046582   ⟹   ENSCAFP00000039681
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl269,073,809 - 9,151,484 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000089349   ⟹   ENSCAFP00000047210
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl269,073,809 - 9,187,061 (-)Ensembl
RefSeq Acc Id: XM_014107737   ⟹   XP_013963212
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1269,073,667 - 9,188,429 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038436684   ⟹   XP_038292612
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,447,406 (-)NCBI
RefSeq Acc Id: XM_038436685   ⟹   XP_038292613
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,447,406 (-)NCBI
RefSeq Acc Id: XM_038436686   ⟹   XP_038292614
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,445,843 (-)NCBI
RefSeq Acc Id: XM_038436687   ⟹   XP_038292615
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,445,843 (-)NCBI
RefSeq Acc Id: XM_038436688   ⟹   XP_038292616
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,445,847 (-)NCBI
RefSeq Acc Id: XM_038436689   ⟹   XP_038292617
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,445,846 (-)NCBI
RefSeq Acc Id: XM_038436690   ⟹   XP_038292618
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,445,848 (-)NCBI
RefSeq Acc Id: XM_038436691   ⟹   XP_038292619
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,333,114 - 9,448,244 (-)NCBI
RefSeq Acc Id: XM_038459138   ⟹   XP_038315066
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,350,358 (-)NCBI
RefSeq Acc Id: XM_038459139   ⟹   XP_038315067
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,350,358 (-)NCBI
RefSeq Acc Id: XM_038459140   ⟹   XP_038315068
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,348,795 (-)NCBI
RefSeq Acc Id: XM_038459141   ⟹   XP_038315069
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,348,795 (-)NCBI
RefSeq Acc Id: XM_038459142   ⟹   XP_038315070
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,348,799 (-)NCBI
RefSeq Acc Id: XM_038459143   ⟹   XP_038315071
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,348,798 (-)NCBI
RefSeq Acc Id: XM_038459144   ⟹   XP_038315072
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,348,800 (-)NCBI
RefSeq Acc Id: XM_038459145   ⟹   XP_038315073
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha269,236,242 - 9,351,196 (-)NCBI
RefSeq Acc Id: XM_038511601   ⟹   XP_038367529
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,403,179 (-)NCBI
RefSeq Acc Id: XM_038511602   ⟹   XP_038367530
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,403,179 (-)NCBI
RefSeq Acc Id: XM_038511603   ⟹   XP_038367531
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,401,616 (-)NCBI
RefSeq Acc Id: XM_038511604   ⟹   XP_038367532
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,401,616 (-)NCBI
RefSeq Acc Id: XM_038511605   ⟹   XP_038367533
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,401,620 (-)NCBI
RefSeq Acc Id: XM_038511606   ⟹   XP_038367534
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,401,619 (-)NCBI
RefSeq Acc Id: XM_038511607   ⟹   XP_038367535
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,401,621 (-)NCBI
RefSeq Acc Id: XM_038511608   ⟹   XP_038367536
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,289,083 - 9,404,017 (-)NCBI
RefSeq Acc Id: XM_038575092   ⟹   XP_038431020
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,418,978 (-)NCBI
RefSeq Acc Id: XM_038575093   ⟹   XP_038431021
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,418,978 (-)NCBI
RefSeq Acc Id: XM_038575094   ⟹   XP_038431022
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,417,415 (-)NCBI
RefSeq Acc Id: XM_038575095   ⟹   XP_038431023
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,417,415 (-)NCBI
RefSeq Acc Id: XM_038575096   ⟹   XP_038431024
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,417,419 (-)NCBI
RefSeq Acc Id: XM_038575097   ⟹   XP_038431025
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,417,418 (-)NCBI
RefSeq Acc Id: XM_038575098   ⟹   XP_038431026
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,417,420 (-)NCBI
RefSeq Acc Id: XM_038575099   ⟹   XP_038431027
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,304,823 - 9,419,816 (-)NCBI
RefSeq Acc Id: XM_038639280   ⟹   XP_038495208
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,465,791 (-)NCBI
RefSeq Acc Id: XM_038639281   ⟹   XP_038495209
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,465,791 (-)NCBI
RefSeq Acc Id: XM_038639282   ⟹   XP_038495210
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,464,228 (-)NCBI
RefSeq Acc Id: XM_038639283   ⟹   XP_038495211
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,464,228 (-)NCBI
RefSeq Acc Id: XM_038639284   ⟹   XP_038495212
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,464,232 (-)NCBI
RefSeq Acc Id: XM_038639285   ⟹   XP_038495213
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,464,231 (-)NCBI
RefSeq Acc Id: XM_038639286   ⟹   XP_038495214
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,464,233 (-)NCBI
RefSeq Acc Id: XM_038639287   ⟹   XP_038495215
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0269,351,063 - 9,466,629 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038292612 (Get FASTA)   NCBI Sequence Viewer  
  XP_038292613 (Get FASTA)   NCBI Sequence Viewer  
  XP_038292614 (Get FASTA)   NCBI Sequence Viewer  
  XP_038292615 (Get FASTA)   NCBI Sequence Viewer  
  XP_038292616 (Get FASTA)   NCBI Sequence Viewer  
  XP_038292617 (Get FASTA)   NCBI Sequence Viewer  
  XP_038292618 (Get FASTA)   NCBI Sequence Viewer  
  XP_038292619 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315066 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315067 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315068 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315069 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315070 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315071 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315072 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315073 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367529 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367530 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367532 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367535 (Get FASTA)   NCBI Sequence Viewer  
  XP_038367536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431020 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431021 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431022 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431023 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431024 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431025 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431026 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431027 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495208 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495209 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495210 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495211 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495212 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495213 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495214 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495215 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013963212   ⟸   XM_014107737
- Sequence:
RefSeq Acc Id: ENSCAFP00000012622   ⟸   ENSCAFT00000013645
RefSeq Acc Id: ENSCAFP00000047210   ⟸   ENSCAFT00000089349
RefSeq Acc Id: ENSCAFP00000039681   ⟸   ENSCAFT00000046582
RefSeq Acc Id: XP_038367536   ⟸   XM_038511608
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038367530   ⟸   XM_038511602
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038367529   ⟸   XM_038511601
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038367535   ⟸   XM_038511607
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038367533   ⟸   XM_038511605
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038367534   ⟸   XM_038511606
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038367532   ⟸   XM_038511604
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038367531   ⟸   XM_038511603
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038495215   ⟸   XM_038639287
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038495209   ⟸   XM_038639281
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038495208   ⟸   XM_038639280
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038495214   ⟸   XM_038639286
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038495212   ⟸   XM_038639284
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038495213   ⟸   XM_038639285
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038495211   ⟸   XM_038639283
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038495210   ⟸   XM_038639282
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038292619   ⟸   XM_038436691
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038292613   ⟸   XM_038436685
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038292612   ⟸   XM_038436684
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038292618   ⟸   XM_038436690
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038292616   ⟸   XM_038436688
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038292617   ⟸   XM_038436689
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038292615   ⟸   XM_038436687
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038292614   ⟸   XM_038436686
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038315073   ⟸   XM_038459145
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038315067   ⟸   XM_038459139
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038315066   ⟸   XM_038459138
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038315072   ⟸   XM_038459144
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038315070   ⟸   XM_038459142
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038315071   ⟸   XM_038459143
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038315069   ⟸   XM_038459141
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038315068   ⟸   XM_038459140
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038431027   ⟸   XM_038575099
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038431021   ⟸   XM_038575093
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038431020   ⟸   XM_038575092
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038431026   ⟸   XM_038575098
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038431024   ⟸   XM_038575096
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038431025   ⟸   XM_038575097
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038431023   ⟸   XM_038575095
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038431022   ⟸   XM_038575094
- Peptide Label: isoform X3
Protein Domains
LsmAD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000008606 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000012622 UniProtKB/TrEMBL
  ENSCAFP00000039681 UniProtKB/TrEMBL
  ENSCAFP00000047210 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000013645 UniProtKB/TrEMBL
  ENSCAFT00000046582 UniProtKB/TrEMBL
  ENSCAFT00000089349 UniProtKB/TrEMBL
InterPro Ataxin-2_C UniProtKB/TrEMBL
  ATXN2 UniProtKB/TrEMBL
  LsmAD_domain UniProtKB/TrEMBL
  SM_dom_ATX UniProtKB/TrEMBL
NCBI Gene ATXN2 ENTREZGENE
PANTHER PTHR12854:SF11 UniProtKB/TrEMBL
Pfam LsmAD UniProtKB/TrEMBL
  PAM2 UniProtKB/TrEMBL
  SM-ATX UniProtKB/TrEMBL
SMART LsmAD UniProtKB/TrEMBL
UniProt A0A5F4C2G9_CANLF UniProtKB/TrEMBL
  F6UUY0_CANLF UniProtKB/TrEMBL
  J9P2A4_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:38301 ENTREZGENE