Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:protein localization to synapse
go back to main search page
Accession:GO:0035418 term browser browse the term
Definition:Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.
Synonyms:exact_synonym: protein localisation to synapse


show annotations for term's descendants           Sort by:
protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid-sensing ion channel 2 acts_upstream_of_or_within IMP (PMID:19571134) MGI PMID:19571134 NCBI chr11:80,770,989...81,859,222
Ensembl chr11:80,770,995...81,859,283 		JBrowse link
G Baiap2 brain-specific angiogenesis inhibitor 1-associated protein 2 involved_in ISO RGD
MGI		 PMID:15758177 GO_REF:0000096 MGI:4417868 RGD:9684984 NCBI chr11:119,833,762...119,897,608
Ensembl chr11:119,833,589...119,897,608 		JBrowse link
G Bsn bassoon involved_in IGI
IBA		 (MGI:5635967|PMID:25652077) ParkinsonsUK-UCL
GO_Central		 PMID:25652077 GO_REF:0000033 MGI:5635967 NCBI chr 9:107,973,221...108,067,618
Ensembl chr 9:107,973,221...108,067,583 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:18054859) MGI PMID:18054859 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within		 ISO
IDA		 (PMID:15978582) MGI PMID:15978582 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348 		JBrowse link
G Dlgap1 DLG associated protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr17:70,276,068...71,128,408
Ensembl chr17:70,276,068...71,128,408 		JBrowse link
G Homer1 homer scaffolding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr13:93,440,265...93,549,471
Ensembl chr13:93,436,143...93,541,637 		JBrowse link
G Klc1 kinesin light chain 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr12:111,724,869...111,774,278
Ensembl chr12:111,725,283...111,774,278 		JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within IMP (PMID:19285470) MGI PMID:19285470 NCBI chr 6:77,192,762...77,236,898
Ensembl chr 6:77,219,672...77,234,774 		JBrowse link
G Mpp4 membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) acts_upstream_of_or_within IMP (PMID:16520334) MGI PMID:16520334 NCBI chr 1:59,160,094...59,202,548
Ensembl chr 1:59,160,094...59,202,548 		JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA (MGI:5284797|PMID:15620359), (MGI:5780536|PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 MGI:5284797 MGI:5780536 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609 		JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA (MGI:5284797|PMID:15620359), (MGI:5780536|PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 MGI:5284797 MGI:5780536 NCBI chr11:69,713,949...69,728,610
Ensembl chr11:69,713,948...69,728,610 		JBrowse link
G Nphs1 nephrosis 1, nephrin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:30,157,259...30,188,048
Ensembl chr 7:30,157,740...30,186,648 		JBrowse link
G Nrxn1 neurexin I involved_in IDA (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IGI
IBA		 (MGI:5635967|PMID:25652077) ParkinsonsUK-UCL
GO_Central		 PMID:25652077 GO_REF:0000033 MGI:5635967 NCBI chr 5:14,564,924...14,913,479
Ensembl chr 5:14,564,932...14,913,473 		JBrowse link
G Reln reelin involved_in IMP (MGI:5286805|PMID:21664258) CACAO PMID:21664258 MGI:5286805 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in IMP (MGI:3775591|PMID:18272690) BHF-UCL PMID:18272690 MGI:3775591 NCBI chr 7:43,958,343...44,009,518
Ensembl chr 7:43,959,677...44,009,996 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:166,789,469...166,838,253
Ensembl chr 2:166,789,469...166,838,219 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:16,299,027...16,591,228
Ensembl chr 1:16,298,898...16,590,336 		JBrowse link
anterograde axonal protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg2 discs large MAGUK scaffold protein 2 involved_in IGI (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chr 7:90,125,399...92,098,454
Ensembl chr 7:90,125,880...92,098,455 		JBrowse link
G Hspb1 heat shock protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:135,916,773...135,918,417
Ensembl chr 5:135,916,773...135,918,417 		JBrowse link
G Kif5a kinesin family member 5A involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:127,061,564...127,102,217
Ensembl chr10:127,061,565...127,099,217 		JBrowse link
G Kif5b kinesin family member 5B involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:6,201,005...6,241,524
Ensembl chr18:6,201,002...6,242,174 		JBrowse link
G Kif5c kinesin family member 5C involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:49,509,298...49,664,790
Ensembl chr 2:49,509,310...49,664,790 		JBrowse link
G Map1a microtubule-associated protein 1 A involved_in IGI (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chr 2:121,119,608...121,141,313
Ensembl chr 2:121,120,081...121,141,313 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in IMP
ISO		 (MGI:6102023|PMID:28259553) UniProt
MGI		 PMID:28259553 GO_REF:0000096 MGI:4417868 MGI:6102023 NCBI chr17:25,116,480...25,155,951
Ensembl chr17:25,111,127...25,155,942 		JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:70,112,202...70,274,704
Ensembl chr18:70,112,202...70,274,676 		JBrowse link
anterograde axonal transport of neurotransmitter receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neto1 neuropilin (NRP) and tolloid (TLL)-like 1 involved_in IMP
IDA		 (PMID:28680963) SynGO PMID:28680963 NCBI chr18:86,411,110...86,524,482
Ensembl chr18:86,413,077...86,524,843 		JBrowse link
establishment of protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rapsn receptor-associated protein of the synapse involved_in ISO RGD
MGI		 PMID:19344765 GO_REF:0000096 MGI:4417868 RGD:8549750 NCBI chr 2:90,864,594...90,876,074
Ensembl chr 2:90,865,965...90,876,074 		JBrowse link
exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sacm1l SAC1 suppressor of actin mutations 1-like (yeast) involved_in IDA
IMP		 (PMID:32931550) SynGO PMID:32931550 NCBI chr 9:123,358,818...123,421,665
Ensembl chr 9:123,358,824...123,421,665 		JBrowse link
G Snap23 synaptosomal-associated protein 23 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:120,398,137...120,436,829
Ensembl chr 2:120,398,152...120,431,736 		JBrowse link
G Snap25 synaptosomal-associated protein 25 involved_in IMP (MGI:5494785|PMID:23395379) SynGO PMID:23395379 MGI:5494785 NCBI chr 2:136,555,359...136,624,348
Ensembl chr 2:136,555,373...136,624,348 		JBrowse link
G Snap47 synaptosomal-associated protein, 47 involved_in IMP
IDA		 (PMID:23395379) SynGO PMID:23395379 NCBI chr11:59,297,967...59,340,868
Ensembl chr11:59,297,960...59,342,012 		JBrowse link
G Stx1b syntaxin 1B involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr 7:127,403,072...127,423,703
Ensembl chr 7:127,403,072...127,423,721 		JBrowse link
G Stx3 syntaxin 3 involved_in IDA
IBA
EXP
IMP
IEP		 (PMID:23395379) SynGO
GO_Central		 PMID:23395379 GO_REF:0000033 NCBI chr19:11,752,482...11,798,933
Ensembl chr19:11,752,482...11,796,767 		JBrowse link
G Stx4a syntaxin 4A (placental) involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:127,439,832...127,450,160
Ensembl chr 7:127,423,466...127,448,191 		JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in IMP
IDA
ISO		 (MGI:5494785|PMID:23395379), (PMID:23395379)
(PMID:23395379)		 SynGO
MGI		 PMID:23395379 GO_REF:0000096 MGI:4417868 MGI:5494785 NCBI chr11:68,979,354...68,983,207
Ensembl chr11:68,979,316...68,983,210 		JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in
acts_upstream_of_or_within		 IDA
IMP
IGI		 (MGI:5284797|PMID:15620359)
(PMID:29107521)		 BHF-UCL
MGI		 PMID:15620359 PMID:29107521 MGI:5284797 NCBI chr11:69,713,949...69,728,610
Ensembl chr11:69,713,948...69,728,610 		JBrowse link
G Nrxn1 neurexin I involved_in IDA (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499 		JBrowse link
G Nrxn2 neurexin II involved_in IDA (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chr19:6,468,786...6,583,247
Ensembl chr19:6,468,761...6,594,199 		JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within IGI
IMP		 (PMID:29107521) MGI PMID:29107521 NCBI chr 3:72,954,399...72,965,298
Ensembl chr 3:72,954,598...72,965,136 		JBrowse link
G Zdhhc12 zinc finger, DHHC domain containing 12 involved_in IMP (MGI:5586946|PMID:25025157) UniProt PMID:25025157 MGI:5586946 NCBI chr 2:29,980,956...29,983,647
Ensembl chr 2:29,980,956...29,983,660 		JBrowse link
neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam22 a disintegrin and metallopeptidase domain 22 involved_in IMP
IDA		 (PMID:16990550) SynGO PMID:16990550 NCBI chr 5:8,122,353...8,418,312
Ensembl chr 5:8,122,352...8,418,160 		JBrowse link
G C1ql2 complement component 1, q subcomponent-like 2 involved_in IDA
IMP		 (PMID:27133466) SynGO PMID:27133466 NCBI chr 1:120,268,312...120,270,903
Ensembl chr 1:120,268,312...120,270,903 		JBrowse link
G C1ql3 C1q-like 3 involved_in IMP
IDA		 (PMID:27133466) SynGO PMID:27133466 NCBI chr 2:13,006,591...13,016,491
Ensembl chr 2:13,008,268...13,016,617 		JBrowse link
G Cacng2 calcium channel, voltage-dependent, gamma subunit 2 involved_in IDA
IMP		 (PMID:18753375) SynGO PMID:18753375 NCBI chr15:77,876,119...78,004,420
Ensembl chr15:77,875,948...78,004,228 		JBrowse link
G Cacng3 calcium channel, voltage-dependent, gamma subunit 3 involved_in IMP
IDA		 (PMID:18753375) SynGO PMID:18753375 NCBI chr 7:122,270,967...122,368,616
Ensembl chr 7:122,269,715...122,368,616 		JBrowse link
G Cacng7 calcium channel, voltage-dependent, gamma subunit 7 involved_in IEP
IMP
IDA		 (PMID:23872597) SynGO PMID:23872597 NCBI chr 7:3,381,341...3,416,737
Ensembl chr 7:3,381,471...3,416,737 		JBrowse link
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 involved_in IDA
IMP		 (PMID:23522044) SynGO PMID:23522044 NCBI chr 1:181,178,024...181,288,059
Ensembl chr 1:181,180,193...181,288,206 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IDA
IEP
IMP		 (PMID:20133708) MGI
SynGO		 PMID:20133708 GO_REF:0000096 MGI:4417868 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947 		JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in IDA
IEP
IMP		 (PMID:17046693) SynGO PMID:17046693 NCBI chr 7:90,125,399...92,098,454
Ensembl chr 7:90,125,880...92,098,455 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IEP
IDA
IMP		 (PMID:17046693) SynGO PMID:17046693 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in IDA
IMP		 (PMID:22184199) SynGO PMID:22184199 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IMP
IDA		 (PMID:22184199) SynGO PMID:22184199 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:77,384,114...77,398,600
Ensembl chr11:77,384,388...77,398,612 		JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in ISO PMID:16299499 SynGO PMID:16299499 RGD:405650352 NCBI chr 5:18,470,133...18,565,411
Ensembl chr 5:18,470,133...18,565,353 		JBrowse link
G Gphn gephyrin involved_in ISO
IDA
IMP		 (PMID:10531433) MGI
SynGO		 PMID:10531433 GO_REF:0000096 MGI:4417868 NCBI chr12:78,264,099...78,731,546
Ensembl chr12:78,273,153...78,731,546 		JBrowse link
G Gpsm2 G-protein signalling modulator 2 (AGS3-like, C. elegans) involved_in ISO PMID:16299499 SynGO PMID:16299499 RGD:405650352 NCBI chr 3:108,585,954...108,629,637
Ensembl chr 3:108,585,954...108,629,625 		JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:33,789,443...34,393,647
Ensembl chr16:33,789,443...34,393,902 		JBrowse link
G Lgi1 leucine-rich repeat LGI family, member 1 involved_in IDA
IMP		 (PMID:20133599) SynGO PMID:20133599 NCBI chr19:38,253,135...38,297,387
Ensembl chr19:38,252,984...38,300,662 		JBrowse link
G Lhfpl4 lipoma HMGIC fusion partner-like protein 4 involved_in IDA
IMP		 (PMID:28279354) SynGO PMID:28279354 NCBI chr 6:113,145,048...113,172,345
Ensembl chr 6:113,145,051...113,172,345 		JBrowse link
G Neto1 neuropilin (NRP) and tolloid (TLL)-like 1 involved_in IDA
IMP		 (PMID:26720915) SynGO PMID:26720915 NCBI chr18:86,411,110...86,524,482
Ensembl chr18:86,413,077...86,524,843 		JBrowse link
G Neto2 neuropilin (NRP) and tolloid (TLL)-like 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:86,363,347...86,428,011
Ensembl chr 8:86,363,217...86,427,553 		JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:119,429,545...119,438,646
Ensembl chr11:119,429,545...119,438,579 		JBrowse link
G Nptx2 neuronal pentraxin 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:144,482,697...144,494,288
Ensembl chr 5:144,482,712...144,494,288 		JBrowse link
G Nptxr neuronal pentraxin receptor involved_in IMP
IDA		 (PMID:27986928) SynGO PMID:27986928 NCBI chr15:79,670,552...79,688,910
Ensembl chr15:79,670,552...79,688,967 		JBrowse link
G Nrxn3 neurexin III involved_in IMP
IDA		 (PMID:27133466) SynGO PMID:27133466 NCBI chr12:88,689,454...90,301,709
Ensembl chr12:88,689,646...90,301,709 		JBrowse link
G Olfm2 olfactomedin 2 involved_in IDA
IMP		 (PMID:25218043) SynGO PMID:25218043 NCBI chr 9:20,578,986...20,657,660
Ensembl chr 9:20,578,986...20,657,645 		JBrowse link
G Rapsn receptor-associated protein of the synapse involved_in IDA
IMP		 (PMID:27839998)
(PMID:14622576), (PMID:27839998)
(PMID:8653787)		 SynGO
MGI		 PMID:8653787 PMID:14622576 PMID:27839998 NCBI chr 2:90,864,594...90,876,074
Ensembl chr 2:90,865,965...90,876,074 		JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 involved_in IMP
IDA		 (PMID:37591201) SynGO PMID:37591201 NCBI chr11:11,063,836...11,219,295
Ensembl chr11:11,064,223...11,218,931 		JBrowse link
neurotransmitter receptor transport postsynaptic membrane to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc7 leucine rich repeat containing 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:157,772,823...158,268,254
Ensembl chr 3:157,788,528...158,267,858
Ensembl chr 3:157,788,528...158,267,858 		JBrowse link
G Mkln1 muskelin 1, intracellular mediator containing kelch motifs involved_in IEP
IDA
IMP		 (PMID:21482357) SynGO PMID:21482357 NCBI chr 6:31,333,833...31,493,744
Ensembl chr 6:31,375,670...31,493,746 		JBrowse link
G Rab4a RAB4A, member RAS oncogene family involved_in IMP
IDA		 (PMID:24217640) SynGO PMID:24217640 NCBI chr 8:124,532,748...124,562,030
Ensembl chr 8:124,532,724...124,562,026 		JBrowse link
G Scrib scribbled planar cell polarity involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
neurotransmitter receptor transport to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn1 calsyntenin 1 involved_in IEP
IDA
IMP		 (PMID:24966372) SynGO PMID:24966372 NCBI chr 4:149,670,536...149,733,356
Ensembl chr 4:149,670,925...149,733,356 		JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:103,056,413...103,359,200
Ensembl chr 5:103,055,814...103,359,200 		JBrowse link
G Mylk myosin, light polypeptide kinase involved_in IDA (PMID:26330558) SynGO PMID:26330558 NCBI chr16:34,565,569...34,822,806
Ensembl chr16:34,565,580...34,822,790 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr 8:72,915,044...72,935,210
Ensembl chr 8:72,915,044...72,937,748 		JBrowse link
G Sacm1l SAC1 suppressor of actin mutations 1-like (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:123,358,818...123,421,665
Ensembl chr 9:123,358,824...123,421,665 		JBrowse link
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IMP
IBA		 (MGI:5498598|PMID:23739967) SynGO
GO_Central		 PMID:23739967 GO_REF:0000033 MGI:5498598 NCBI chr11:64,892,865...65,053,779
Ensembl chr11:64,892,865...65,053,787 		JBrowse link
G Grip1 glutamate receptor interacting protein 1 involved_in IEP
IBA
IDA
IMP		 (PMID:20956289) SynGO
GO_Central		 PMID:20956289 GO_REF:0000033 NCBI chr10:119,289,810...119,923,172
Ensembl chr10:119,289,735...119,923,166 		JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in IDA
IMP
IBA
IEP		 (PMID:20956289) SynGO
GO_Central		 PMID:20956289 GO_REF:0000033 NCBI chr 6:91,738,433...91,820,884
Ensembl chr 6:91,738,490...91,804,231 		JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr  X:7,656,009...7,686,805
Ensembl chr  X:7,656,004...7,686,806 		JBrowse link
G Lrrc7 leucine rich repeat containing 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:157,772,823...158,268,254
Ensembl chr 3:157,788,528...158,267,858
Ensembl chr 3:157,788,528...158,267,858 		JBrowse link
G Nsg1 neuron specific gene family member 1 involved_in IMP
IDA		 (PMID:16037816) SynGO PMID:16037816 NCBI chr 5:38,294,537...38,317,087
Ensembl chr 5:38,294,536...38,317,251 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr 9:64,622,582...64,645,038
Ensembl chr 9:64,622,581...64,645,040 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:72,915,044...72,935,210
Ensembl chr 8:72,915,044...72,937,748 		JBrowse link
G Scrib scribbled planar cell polarity involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in ISO PMID:34496238 SynGO PMID:34496238 RGD:405650337 NCBI chr 1:162,398,084...162,426,651
Ensembl chr 1:162,398,084...162,426,653 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in IDA
IMP		 (PMID:28384478) SynGO PMID:28384478 NCBI chr 8:85,987,014...86,026,146
Ensembl chr 8:85,987,021...86,026,431 		JBrowse link
positive regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 acts_upstream_of_or_within IDA (PMID:24613359) MGI PMID:24613359 NCBI chr 6:124,407,715...124,441,743
Ensembl chr 6:124,407,540...124,441,753 		JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:104,120,235...104,222,916
Ensembl chr11:104,122,216...104,222,916 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO RGD
MGI		 PMID:15681343 GO_REF:0000096 MGI:4417868 RGD:8553420 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609 		JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:24613359) RGD
MGI		 PMID:15681343 PMID:24613359 GO_REF:0000096 MGI:4417868 RGD:8553420 NCBI chr11:69,713,949...69,728,610
Ensembl chr11:69,713,948...69,728,610 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO RGD
MGI		 PMID:15681343 GO_REF:0000096 MGI:4417868 RGD:8553420 NCBI chr  X:100,342,785...100,364,956
Ensembl chr  X:100,342,774...100,369,569 		JBrowse link
protein localization to postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc15 zinc finger, DHHC domain containing 15 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr  X:103,580,575...103,714,696
Ensembl chr  X:103,580,575...103,714,670 		JBrowse link
protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate receptor, ionotropic, NMDA1 (zeta 1) acts_upstream_of_or_within IMP (PMID:12676993) MGI PMID:12676993 NCBI chr 2:25,181,189...25,209,199
Ensembl chr 2:25,181,193...25,209,199 		JBrowse link
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) acts_upstream_of_or_within IMP
IGI		 (PMID:15317856) MGI PMID:15317856 NCBI chr16:9,385,765...9,813,744
Ensembl chr16:9,385,762...9,813,424 		JBrowse link
G Grin2c glutamate receptor, ionotropic, NMDA2C (epsilon 3) acts_upstream_of_or_within IMP
IGI		 (PMID:15317856) MGI PMID:15317856 NCBI chr11:115,139,995...115,158,123
Ensembl chr11:115,139,995...115,158,069 		JBrowse link
G Zdhhc2 zinc finger, DHHC domain containing 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:40,876,526...40,946,178
Ensembl chr 8:40,876,856...40,963,309 		JBrowse link
regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in IMP
IDA		 (PMID:22284181) SynGO PMID:22284181 NCBI chr 5:108,666,420...108,697,893
Ensembl chr 5:108,666,420...108,697,890 		JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1 like 1 involved_in IEP
IMP
IDA		 (PMID:19503082) SynGO PMID:19503082 NCBI chr 2:156,255,918...156,385,134
Ensembl chr 2:156,262,829...156,385,134 		JBrowse link
regulation of neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 a disintegrin and metallopeptidase domain 10 involved_in EXP
IDA		 (PMID:21123580) SynGO PMID:21123580 NCBI chr 9:70,586,133...70,687,511
Ensembl chr 9:70,586,279...70,687,511 		JBrowse link
G Cacna2d2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 involved_in IDA
IMP		 (PMID:30683685) SynGO PMID:30683685 NCBI chr 9:107,276,948...107,406,545
Ensembl chr 9:107,276,811...107,406,542 		JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:61,058,704...61,121,224
Ensembl chr18:61,058,690...61,121,224 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO PMID:28973854 SynGO PMID:28973854 RGD:405650304 NCBI chr 8:89,423,506...89,478,574
Ensembl chr 8:89,423,675...89,478,573 		JBrowse link
G Dag1 dystroglycan 1 involved_in IDA
IMP		 (PMID:27707967) SynGO PMID:27707967 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO PMID:19796685 SynGO PMID:19796685 RGD:405650367 NCBI chr17:69,382,642...69,596,986
Ensembl chr17:69,382,678...69,596,984 		JBrowse link
G Exoc4 exocyst complex component 4 involved_in ISO PMID:12738960 SynGO PMID:12738960 RGD:8554028 NCBI chr 6:33,226,025...33,950,914
Ensembl chr 6:33,226,020...33,950,914 		JBrowse link
G Gabarap gamma-aminobutyric acid receptor associated protein involved_in EXP
IMP
IDA		 (PMID:33436612) SynGO PMID:33436612 NCBI chr11:69,882,196...69,885,775
Ensembl chr11:69,881,969...69,885,777 		JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:27,425,500...27,433,384
Ensembl chr 3:27,425,500...27,432,159 		JBrowse link
G Gpc4 glypican 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr  X:51,139,884...51,253,800
Ensembl chr  X:51,141,898...51,254,129 		JBrowse link
G Gpc6 glypican 6 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr14:117,162,332...118,216,941
Ensembl chr14:117,162,727...118,213,956 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446 		JBrowse link
G Hras Harvey rat sarcoma virus oncogene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:140,770,839...140,773,938
Ensembl chr 7:140,769,018...140,773,918 		JBrowse link
G Iqsec2 IQ motif and Sec7 domain 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:150,927,179...151,008,233
Ensembl chr  X:150,927,193...151,008,232 		JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:33,789,443...34,393,647
Ensembl chr16:33,789,443...34,393,902 		JBrowse link
G Kif2c kinesin family member 2C involved_in IMP
IDA		 (PMID:35138249) SynGO PMID:35138249 NCBI chr 4:117,016,830...117,039,821
Ensembl chr 4:117,016,836...117,039,836 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:19,431,787...20,909,790
Ensembl chr 5:19,432,034...20,909,790 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Nbea neurobeachin involved_in IDA
IMP		 (PMID:29847800) SynGO PMID:29847800 NCBI chr 3:55,532,616...56,091,169
Ensembl chr 3:55,532,616...56,091,122 		JBrowse link
G Neto2 neuropilin (NRP) and tolloid (TLL)-like 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:86,363,347...86,428,011
Ensembl chr 8:86,363,217...86,427,553 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) involved_in IDA
IMP
IEP		 (PMID:28143929) SynGO PMID:28143929 NCBI chr  X:100,683,617...100,727,957
Ensembl chr  X:100,683,666...100,727,957 		JBrowse link
G Olfm1 olfactomedin 1 involved_in ISO PMID:30067977 SynGO PMID:30067977 RGD:405650285 NCBI chr 2:28,083,105...28,120,748
Ensembl chr 2:28,083,004...28,120,748 		JBrowse link
G Prkcz protein kinase C, zeta involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:155,344,579...155,445,856
Ensembl chr 4:155,344,586...155,445,818 		JBrowse link
G Rap1a RAS-related protein 1a involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:105,634,576...105,708,740
Ensembl chr 3:105,634,583...105,708,652 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor (GEF) 4 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:71,811,559...72,087,818
Ensembl chr 2:71,811,584...72,087,818 		JBrowse link
G Tmem108 transmembrane protein 108 involved_in IMP
IDA		 (PMID:28096412) SynGO PMID:28096412 NCBI chr 9:103,360,135...103,639,099
Ensembl chr 9:103,360,146...103,639,036 		JBrowse link
G Tnik TRAF2 and NCK interacting kinase involved_in IMP
IDA		 (PMID:23035106) SynGO PMID:23035106 NCBI chr 3:28,317,362...28,724,734
Ensembl chr 3:28,317,363...28,730,007 		JBrowse link
G Traf6 TNF receptor-associated factor 6 involved_in IEP
IDA
IMP		 (PMID:28973854) SynGO PMID:28973854 NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014 		JBrowse link
G Vps26b VPS26 retromer complex component B involved_in IDA
IMP		 (PMID:34965419) SynGO PMID:34965419 NCBI chr 9:26,915,798...26,941,390
Ensembl chr 9:26,919,067...26,941,361 		JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IDA
IMP		 (PMID:23739967) SynGO PMID:23739967 NCBI chr11:64,892,865...65,053,779
Ensembl chr11:64,892,865...65,053,787 		JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in ISO
IBA
IDA
IMP
IEP		 (PMID:28285821) MGI
GO_Central
SynGO		 PMID:28285821 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr  X:7,656,009...7,686,805
Ensembl chr  X:7,656,004...7,686,806 		JBrowse link
regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B involved_in IMP (MGI:6094388|PMID:27307232) UniProt PMID:27307232 MGI:6094388 NCBI chr19:21,630,483...21,663,002
Ensembl chr19:21,630,549...21,663,001 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IDA
ISO		 (MGI:5514106|PMID:23676497) UniProt
MGI		 PMID:23676497 GO_REF:0000119 MGI:4834177 MGI:5514106 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28581
    localization 5550
      macromolecule localization 3242
        cellular macromolecule localization 2751
          protein localization 2739
            protein localization to cell junction 152
              protein localization to synapse 118
                gephyrin clustering involved in postsynaptic density assembly 5
                positive regulation of protein localization to synapse + 5
                protein localization to postsynapse + 86
                protein localization to presynapse + 9
                regulation of protein localization to synapse + 38
paths to the root