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ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to cell junction
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Accession:GO:1902414 term browser browse the term
Definition:A process in which a protein is transported to, or maintained in, a location within a cell junction.
Synonyms:exact_synonym: protein localisation in cell junction;   protein localisation to cell junction;   protein localization in cell junction


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protein localization to cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (MGI:5586967|PMID:22512338) RGD PMID:22512338 MGI:5586967 NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Fermt2 FERM domain containing kindlin 2 acts_upstream_of_or_within ISO (PMID:30254023) RGD PMID:30254023 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 involved_in ISO (PMID:26780829) RGD PMID:26780829 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO UniProtKB:Q07157 (PMID:19060272) RGD PMID:19060272 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Kif3a kinesin family member 3a involved_in ISO (PMID:24338362) RGD PMID:24338362 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 acts_upstream_of_or_within ISO UniProtKB:Q9Y2Q5 (MGI:5609900|PMID:24841562) RGD PMID:24841562 MGI:5609900 NCBI chr 2:174,008,556...174,011,950
Ensembl chr 2:174,008,548...174,013,013
JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 acts_upstream_of_or_within ISO (MGI:5609900|PMID:24841562) RGD PMID:24841562 MGI:5609900 NCBI chr 2:226,411,389...226,423,612
Ensembl chr 2:226,411,400...226,423,607
JBrowse link
G Marveld3 MARVEL domain containing 3 acts_upstream_of_or_within ISO (PMID:24567356) RGD PMID:24567356 NCBI chr19:37,908,727...37,923,420
Ensembl chr19:37,905,638...37,923,420
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5586967|PMID:22512338)
RGD PMID:22512338 PMID:21873635 MGI:5586967, RGD:13792537 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 acts_upstream_of_or_within ISO (MGI:5586967|PMID:22512338) RGD PMID:22512338 MGI:5586967 NCBI chr11:54,362,712...54,461,316
Ensembl chr11:54,364,487...54,462,519
JBrowse link
anterograde axonal protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO UniProtKB:Q9QYR6 (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 1:144,451,653...146,503,949
Ensembl chr 1:144,451,472...146,499,475
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23728742)
UniProt
Ensembl
RGD
PMID:23728742 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,794,014...20,795,675
Ensembl chr12:20,794,028...20,795,743
JBrowse link
G Kif5a kinesin family member 5A involved_in IMP PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Kif5b kinesin family member 5B involved_in IMP PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chr17:51,489,873...51,527,508
Ensembl chr17:51,489,944...51,527,508
JBrowse link
G Kif5c kinesin family member 5C involved_in IMP PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO UniProtKB:Q91XM9 (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in IMP
ISO
PMID:21775604
(MGI:6102023|PMID:28259553)
RGD PMID:28259553 PMID:21775604 MGI:6102023, RGD:13673858 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IMP PMID:21775604 UniProt PMID:21775604 RGD:13673858 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180
JBrowse link
establishment of protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rapsn receptor-associated protein of the synapse IMP RGD PMID:19344765 RGD:8549750 NCBI chr 3:77,014,699...77,024,373
Ensembl chr 3:76,983,471...77,024,373
JBrowse link
exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in ISO (MGI:5315203|PMID:22284181) RGD PMID:22284181 MGI:5315203 NCBI chr14:1,184,638...1,216,392 JBrowse link
G Snap23 synaptosome associated protein 23 involved_in IMP
IDA
PMID:26839408 SynGO PMID:26839408 PMID:26839408 RGD:12050145, RGD:12050145 NCBI chr 3:107,514,088...107,546,177 JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA
ISO
GO_REF:0000107
(MGI:5494785|PMID:23395379)
Ensembl
RGD
PMID:23395379 GO_REF:0000107 MGI:5494785 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snap47 synaptosome associated protein 47 involved_in ISO (MGI:5494785|PMID:23395379) RGD PMID:23395379 MGI:5494785 NCBI chr10:44,192,886...44,234,435
Ensembl chr10:44,191,218...44,234,424
JBrowse link
G Stx1b syntaxin 1B involved_in IBA
IMP
PMID:21873635
PMID:26839408
GO_Central
SynGO
PMID:21873635 PMID:26839408 RGD:13792537, RGD:12050145 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stx3 syntaxin 3 involved_in IBA
ISO
PMID:21873635
(MGI:5494785|PMID:23395379)
RGD PMID:23395379 PMID:21873635 MGI:5494785, RGD:13792537 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
JBrowse link
G Stx4 syntaxin 4 involved_in IMP
IDA
PMID:20434989 SynGO PMID:20434989 PMID:20434989 RGD:13702188, RGD:13702188 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in IMP
ISO
PMID:26839408
(MGI:5494785|PMID:23395379)
RGD PMID:23395379 PMID:26839408 MGI:5494785, RGD:12050145 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5284797|PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 GO_REF:0000024 GO_REF:0000107 MGI:5284797 NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5285129|PMID:21424692)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISS
ISO
GO_REF:0000024
(MGI:5586946|PMID:25025157)
UniProt
RGD
PMID:25025157 GO_REF:0000024 MGI:5586946 NCBI chr 3:13,363,504...13,366,383
Ensembl chr 3:13,363,504...13,366,474
JBrowse link
neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam22 ADAM metallopeptidase domain 22 involved_in ISO (MGI:3663801|PMID:16990550) RGD PMID:16990550 MGI:3663801 NCBI chr 4:25,716,055...25,970,932
Ensembl chr 4:25,715,990...25,964,962
JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in ISO (MGI:3806400|PMID:18753375) RGD PMID:18753375 MGI:3806400 NCBI chr 7:109,572,838...109,698,516
Ensembl chr 7:109,574,459...109,697,227
JBrowse link
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 involved_in ISO (MGI:3806400|PMID:18753375) RGD PMID:18753375 MGI:3806400 NCBI chr 1:177,201,990...177,296,473
Ensembl chr 1:177,201,288...177,297,024
JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 involved_in ISO (MGI:5528969|PMID:23872597) RGD PMID:23872597 MGI:5528969 NCBI chr 1:65,800,820...65,831,165
Ensembl chr 1:65,800,355...65,831,006
JBrowse link
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 involved_in ISO (MGI:5494891|PMID:23522044) RGD PMID:23522044 MGI:5494891 NCBI chr13:93,016,707...93,208,168
Ensembl chr13:93,099,784...93,208,121
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IMP
ISO
IBA
IEA
IDA
PMID:12805297
(MGI:4431118|PMID:20133708)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:20133708 PMID:12805297 PMID:21873635 PMID:12805297 GO_REF:0000107 MGI:4431118, RGD:13702333, RGD:13792537, RGD:13702333 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (MGI:3716052|PMID:17046693) RGD PMID:17046693 MGI:3716052 NCBI chr 1:144,451,653...146,503,949
Ensembl chr 1:144,451,472...146,499,475
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:3716052|PMID:17046693)
Ensembl
RGD
PMID:17046693 GO_REF:0000107 MGI:3716052 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Git1 GIT ArfGAP 1 involved_in IMP
IDA
PMID:25284783 SynGO PMID:25284783 PMID:25284783 RGD:13702191, RGD:13702191 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373
JBrowse link
G Gphn gephyrin involved_in IMP
ISO
IDA
PMID:8264797
(MGI:1346942|PMID:10531433)
RGD PMID:10531433 PMID:8264797 PMID:8264797 MGI:1346942, RGD:13702318, RGD:13702318 NCBI chr 6:96,954,365...97,483,617
Ensembl chr 6:96,892,148...97,483,612
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in IMP PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Lgi1 leucine-rich, glioma inactivated 1 involved_in ISO (MGI:4431144|PMID:20133599) RGD PMID:20133599 MGI:4431144 NCBI chr 1:236,043,376...236,084,270
Ensembl chr 1:236,042,954...236,084,616
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in EXP
IMP
IDA
PMID:29024665 SynGO PMID:29024665 PMID:29024665 PMID:29024665 RGD:13702141, RGD:13702141, RGD:13702141 NCBI chr10:104,811,107...104,820,358
Ensembl chr10:104,811,403...104,820,367
JBrowse link
G Nptx2 neuronal pentraxin 2 involved_in IDA
IMP
PMID:10399937 SynGO PMID:10399937 PMID:10399937 RGD:13702159, RGD:13702159 NCBI chr12:10,037,435...10,048,345
Ensembl chr12:10,037,435...10,048,345
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in IDA
IMP
PMID:27986928 SynGO PMID:27986928 PMID:27986928 RGD:13702245, RGD:13702245 NCBI chr 7:111,336,660...111,354,737
Ensembl chr 7:111,336,664...111,354,802
JBrowse link
neurotransmitter receptor transport postsynaptic membrane to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scrib scribble planar cell polarity protein involved_in IBA
IMP
PMID:21873635
PMID:25310985
GO_Central
SynGO
PMID:21873635 PMID:25310985 RGD:13792537, RGD:12050130 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
neurotransmitter receptor transport to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn1 calsyntenin 1 involved_in ISO (MGI:5581343|PMID:24966372) RGD PMID:24966372 MGI:5581343 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583
JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in IDA
EXP
IMP
PMID:23838184 SynGO PMID:23838184 PMID:23838184 PMID:23838184 RGD:13702338, RGD:13702338, RGD:13702338 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IMP
IDA
IBA
PMID:15297461
PMID:21873635
SynGO
GO_Central
PMID:15297461 PMID:15297461 PMID:21873635 RGD:2306456, RGD:2306456, RGD:13792537 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IEA
ISO
IBA
GO_REF:0000107
(MGI:5498598|PMID:23739967)
PMID:21873635
Ensembl
RGD
PMID:23739967 PMID:21873635 GO_REF:0000107 MGI:5498598, RGD:13792537 NCBI chr10:49,655,583...49,822,876
Ensembl chr10:49,655,584...49,824,297
JBrowse link
G Grip1 glutamate receptor interacting protein 1 involved_in IBA
ISO
IEA
PMID:21873635
(MGI:4840152|PMID:20956289)
GO_REF:0000107
RGD
Ensembl
PMID:20956289 PMID:21873635 GO_REF:0000107 MGI:4840152, RGD:13792537 NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in IBA
ISO
PMID:21873635
(MGI:4840152|PMID:20956289)
RGD PMID:20956289 PMID:21873635 MGI:4840152, RGD:13792537 NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IMP
IBA
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723 PMID:21873635 RGD:12050105, RGD:13792537 NCBI chr  X:14,678,896...14,708,747
Ensembl chr  X:14,678,898...14,708,679
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in ISO (MGI:5819354|PMID:16037816) RGD PMID:16037816 MGI:5819354 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in IMP
IDA
IBA
PMID:18045925
PMID:21873635
SynGO
GO_Central
PMID:18045925 PMID:18045925 PMID:21873635 RGD:2306457, RGD:2306457, RGD:13792537 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IMP
IDA
PMID:18045925 SynGO PMID:18045925 PMID:18045925 RGD:2306457, RGD:2306457 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Scrib scribble planar cell polarity protein involved_in IDA
IBA
IMP
PMID:25310985
PMID:21873635
SynGO
GO_Central
PMID:25310985 PMID:21873635 PMID:25310985 RGD:12050130, RGD:13792537, RGD:12050130 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:6114586|PMID:28384478) RGD PMID:28384478 MGI:6114586 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
positive regulation of protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:26706435) RGD PMID:26706435 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
positive regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Mapt microtubule-associated protein tau involved_in IEA
ISO
GO_REF:0000107
(PMID:20655099)
Ensembl
RGD
PMID:20655099 GO_REF:0000107 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Nlgn1 neuroligin 1 IMP RGD PMID:15681343 RGD:8553420 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 PMID:15681343 GO_REF:0000107, RGD:8553420 NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 IMP RGD PMID:15681343 RGD:8553420 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA
UniProtKB:P12830|UniProtKB:P35222 (PMID:22855531)
GO_REF:0000107
RGD
Ensembl
PMID:22855531 GO_REF:0000107 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO MGI:3757646 (MGI:3722974|PMID:17765678) RGD PMID:17765678 MGI:3722974 NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
JBrowse link
G Mpp7 membrane palmitoylated protein 7 involved_in ISO (PMID:17237226) RGD PMID:17237226 NCBI chr17:55,439,939...55,706,810
Ensembl chr17:55,442,696...55,706,748
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:16611247) RGD PMID:16611247 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO UniProtKB:Q9NRY4 (PMID:25753039) RGD PMID:25753039 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
protein localization to bicellular tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IMP RGD PMID:28880272 RGD:13703098 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Actg1 actin, gamma 1 involved_in ISO UniProtKB:O95832|UniProtKB:Q07157|UniProtKB:Q16625 (PMID:22855531) RGD PMID:22855531 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Actn4 actinin alpha 4 involved_in ISO (MGI:3794927|PMID:18332111) RGD PMID:18332111 MGI:3794927 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847
JBrowse link
G Cdh5 cadherin 5 involved_in ISO UniProtKB:P18206|UniProtKB:P33151|UniProtKB:Q13177|UniProtKB:Q9UKX2 (PMID:25753039) RGD PMID:25753039 NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
JBrowse link
G F11r F11 receptor involved_in ISO UniProtKB:O00501|UniProtKB:P18206|UniProtKB:Q07157|UniProtKB:Q13177 (PMID:25753039) RGD PMID:25753039 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
JBrowse link
G Flna filamin A IMP RGD PMID:22872576 RGD:7207404 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO UniProtKB:O00501|UniProtKB:Q9Y624 (PMID:25753039) RGD PMID:25753039 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef18 Rho/Rac guanine nucleotide exchange factor 18 involved_in ISO UniProtKB:P18206 (PMID:25753039) RGD PMID:25753039 NCBI chr12:1,395,035...1,503,081
Ensembl chr12:1,395,088...1,503,081
JBrowse link
G Cgnl1 cingulin-like 1 involved_in ISO UniProtKB:P18206|UniProtKB:Q6ZSZ5 (PMID:25753039) RGD PMID:25753039 NCBI chr 8:72,273,401...72,424,842
Ensembl chr 8:72,275,645...72,422,917
JBrowse link
G Dsp desmoplakin involved_in ISO (MGI:3723417|PMID:16917092) RGD PMID:16917092 MGI:3723417 NCBI chr17:26,623,602...26,671,692
Ensembl chr17:26,623,588...26,671,800
JBrowse link
G Jak1 Janus kinase 1 involved_in ISO (PMID:21679692) RGD PMID:21679692 NCBI chr 5:115,780,248...115,888,841
Ensembl chr 5:115,780,248...115,888,926
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO UniProtKB:P10916|UniProtKB:P18206|UniProtKB:Q9UKX2 (PMID:25753039) RGD PMID:25753039 NCBI chr11:68,708,070...68,766,622
Ensembl chr11:68,707,969...68,768,816
JBrowse link
G Tjp1 tight junction protein 1 involved_in IBA
ISO
PMID:21873635
UniProtKB:P18206 (MGI:6206452|PMID:25753039)
UniProtKB:O00501|UniProtKB:P18206|UniProtKB:P49023|UniProtKB:P60709|UniProtKB:Q0VF96|UniProtKB:Q13177|UniProtKB:Q6ZSZ5|UniProtKB:Q9UKX2 (PMID:25753039)
RGD PMID:25753039 PMID:21873635 MGI:6206452, RGD:13792537 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
G Tjp2 tight junction protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:221,709,745...221,838,383
Ensembl chr 1:221,709,745...221,838,295
JBrowse link
G Tjp3 tight junction protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,427,650...8,446,279
Ensembl chr 7:8,432,811...8,446,279
JBrowse link
protein localization to postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in IMP PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chr  X:69,568,086...69,701,756
Ensembl chr  X:69,574,124...69,701,756
JBrowse link
protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928279|MGI:2177650 (MGI:2661373|PMID:12676993) RGD PMID:12676993 MGI:2661373 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1928285|MGI:95822 (MGI:3054180|PMID:15317856)
Ensembl
RGD
PMID:15317856 GO_REF:0000107 MGI:3054180 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3054830|MGI:95820 (MGI:3054180|PMID:15317856)
Ensembl
RGD
PMID:15317856 GO_REF:0000107 MGI:3054180 NCBI chr10:100,488,430...100,507,083
Ensembl chr10:100,488,431...100,506,427
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IMP PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060
JBrowse link
protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180111 (MGI:3851850|PMID:19571134)
Ensembl
RGD
PMID:19571134 GO_REF:0000107 MGI:3851850 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IMP RGD PMID:15758177 RGD:9684984 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IEA
ISO
IBA
GO_REF:0000107
UniProtKB:Q9QYX7 (MGI:5635967|PMID:25652077)
PMID:21873635
Ensembl
RGD
PMID:25652077 PMID:21873635 GO_REF:0000107 MGI:5635967, RGD:13792537 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO (MGI:4941854|PMID:18054859) RGD PMID:18054859 MGI:4941854 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:15620359
(MGI:3583832|PMID:15978582)
PMID:12097487
(PMID:15496675)
RGD PMID:15496675 PMID:15978582 PMID:15620359 PMID:12097487 MGI:3583832, RGD:8553937, RGD:8553478 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Dlgap1 DLG associated protein 1 involved_in IMP PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chr 9:109,857,500...110,726,817
Ensembl chr 9:110,167,448...110,726,817
JBrowse link
G Homer1 homer scaffold protein 1 involved_in IDA PMID:12867517 BHF-UCL PMID:12867517 RGD:8554389 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Klc1 kinesin light chain 1 involved_in IMP PMID:19861499 UniProt PMID:19861499 RGD:5683640 NCBI chr 6:130,823,416...130,866,729
Ensembl chr 6:130,823,419...130,867,031
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO MGI:3836788 (MGI:3836315|PMID:19285470) RGD PMID:19285470 MGI:3836315 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Mpp4 membrane palmitoylated protein 4 acts_upstream_of_or_within ISO MGI:3624689 (MGI:3623543|PMID:16520334) RGD PMID:16520334 MGI:3623543 NCBI chr 9:60,569,734...60,613,035
Ensembl chr 9:60,569,734...60,611,797
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5780536|PMID:22960622)
BHF-UCL
RGD
PMID:15620359 PMID:22960622 GO_REF:0000024 MGI:5284797 MGI:5780536 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5780536|PMID:22960622)
BHF-UCL
RGD
PMID:15620359 PMID:22960622 GO_REF:0000024 MGI:5284797 MGI:5780536 NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IBA
ISO
PMID:21873635
UniProtKB:O88737 (MGI:5635967|PMID:25652077)
RGD PMID:25652077 PMID:21873635 MGI:5635967, RGD:13792537 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Reln reelin involved_in ISO
IEA
(MGI:5286805|PMID:21664258)
GO_REF:0000107
RGD
Ensembl
PMID:21664258 GO_REF:0000107 MGI:5286805 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3775591|PMID:18272690)
BHF-UCL
RGD
PMID:18272690 GO_REF:0000024 MGI:3775591 NCBI chr 1:94,807,879...94,857,356
Ensembl chr 1:94,808,276...94,855,824
JBrowse link
protein localization to tricellular tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lsr lipolysis stimulated lipoprotein receptor involved_in
acts_upstream_of_or_within
ISO UniProtKB:Q3UZP0 (MGI:6316553|PMID:21245199)
(MGI:5755209|PMID:24889144)
RGD PMID:21245199 PMID:24889144 MGI:5755209 MGI:6316553 NCBI chr 1:86,185,769...86,201,952
Ensembl chr 1:86,186,431...86,201,952
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (MGI:5755209|PMID:24889144) RGD PMID:24889144 MGI:5755209 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5755209|PMID:24889144)
Ensembl
RGD
PMID:24889144 GO_REF:0000107 MGI:5755209 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
regulation of neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in ISO (MGI:6189345|PMID:21123580) RGD PMID:21123580 MGI:6189345 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in IMP
IDA
PMID:12202034 SynGO PMID:12202034 PMID:12202034 RGD:13702166, RGD:13702166 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (MGI:5804030|PMID:27707967) RGD PMID:27707967 MGI:5804030 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in EXP
IDA
PMID:24367106 SynGO PMID:24367106 PMID:24367106 RGD:13702206, RGD:13702206 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Gpc4 glypican 4 involved_in IMP
IBA
IDA
PMID:22722203
PMID:21873635
SynGO
GO_Central
PMID:22722203 PMID:21873635 PMID:22722203 RGD:13702461, RGD:13792537, RGD:13702461 NCBI chr  X:131,644,711...131,755,349
Ensembl chr  X:131,644,704...131,755,284
JBrowse link
G Gpc6 glypican 6 involved_in IMP
IBA
IDA
PMID:22722203
PMID:21873635
SynGO
GO_Central
PMID:22722203 PMID:21873635 PMID:22722203 RGD:13702461, RGD:13792537, RGD:13702461 NCBI chr15:94,030,218...95,027,883
Ensembl chr15:94,029,884...95,024,006
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IDA
IMP
PMID:23864697 SynGO PMID:23864697 PMID:23864697 RGD:13702314, RGD:13702314 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:12202034) RGD PMID:12202034 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 involved_in ISO (PMID:27009485) RGD PMID:27009485 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in IMP
IDA
PMID:18031682 SynGO PMID:18031682 PMID:18031682 RGD:12050112, RGD:12050112 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IMP
IDA
PMID:22593065 SynGO PMID:22593065 PMID:22593065 RGD:13702450, RGD:13702450 NCBI chr 4:14,388,322...15,870,036
Ensembl chr 4:14,386,399...15,870,240
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in EXP
IDA
PMID:12202034 SynGO PMID:12202034 PMID:12202034 RGD:13702166, RGD:13702166 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Prkcz protein kinase C, zeta involved_in IDA
IMP
PMID:18667614 SynGO PMID:18667614 PMID:18667614 RGD:13702194, RGD:13702194 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in ISO (PMID:12202034) RGD PMID:12202034 NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in IMP
IDA
PMID:19734897 SynGO PMID:19734897 PMID:19734897 RGD:2314692, RGD:2314692 NCBI chr 3:56,809,388...57,101,332
Ensembl chr 3:56,809,270...57,102,316
JBrowse link
G Tnik TRAF2 and NCK interacting kinase involved_in ISO (MGI:5450764|PMID:23035106) RGD PMID:23035106 MGI:5450764 NCBI chr 2:111,184,352...111,587,993
Ensembl chr 2:111,184,387...111,580,750
JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IEA
ISO
GO_REF:0000107
(MGI:5498598|PMID:23739967)
Ensembl
RGD
PMID:23739967 GO_REF:0000107 MGI:5498598 NCBI chr10:49,655,583...49,822,876
Ensembl chr10:49,655,584...49,824,297
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IDA
IMP
IBA
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723 PMID:20098723 PMID:21873635 RGD:12050105, RGD:12050105, RGD:13792537 NCBI chr  X:14,678,896...14,708,747
Ensembl chr  X:14,678,898...14,708,679
JBrowse link
G Tamalin trafficking regulator and scaffold protein tamalin involved_in ISO (MGI:6114599|PMID:28285821) RGD PMID:28285821 MGI:6114599 NCBI chr 7:132,338,900...132,359,519
Ensembl chr 7:132,338,900...132,346,666
JBrowse link
regulation of protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P33151 (PMID:26923917)
Ensembl
RGD
PMID:26923917 GO_REF:0000107 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link
regulation of protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:27380321)
UniProt
RGD
PMID:27380321 GO_REF:0000024 NCBI chr19:48,139,309...48,156,673
Ensembl chr19:48,139,527...48,156,673
JBrowse link
regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (MGI:6094388|PMID:27307232) RGD PMID:27307232 MGI:6094388 NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5514106|PMID:23676497)
(PMID:23676497)
Ensembl
RGD
PMID:23676497 GO_REF:0000107 MGI:5514106 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      macromolecule localization 3001
        protein localization 2559
          protein localization to cell junction 118
            protein localization to cell-cell junction + 24
            protein localization to synapse + 85
paths to the root