Arhgap44 (Rho GTPase activating protein 44) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Arhgap44 (Rho GTPase activating protein 44) Mus musculus
Analyze
Symbol: Arhgap44
Name: Rho GTPase activating protein 44
RGD ID: 1332239
MGI Page MGI
Description: Is expressed in central nervous system; olfactory epithelium; respiratory system; and retina. Orthologous to human ARHGAP44 (Rho GTPase activating protein 44); INTERACTS WITH 1,2-dimethylhydrazine; 4-hydroxyphenyl retinamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 6330543G20; AI840762; AU04082; AU040829; AW493732; rho GTPase-activating protein 44; rho GTPase-activating protein RICH2; Rho-type GTPase-activating protein RICH2; RhoGAP interacting with CIP4 homologs protein 2; RICH-2; Rich2; RP23-219K7.2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,892,865 - 65,053,817 (-)NCBIGRCm39mm39
GRCm39 Ensembl1164,892,865 - 65,053,787 (-)Ensembl
GRCm381165,002,039 - 65,162,972 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1165,002,039 - 65,162,961 (-)EnsemblGRCm38mm10GRCm38
MGSCv371164,815,541 - 64,976,463 (-)NCBIGRCm37mm9NCBIm37
MGSCv361164,818,234 - 64,979,156 (-)NCBImm8
Celera1171,938,015 - 72,099,074 (-)NCBICelera
Cytogenetic Map11B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:11431473   PMID:12466851   PMID:12477932   PMID:12520002   PMID:14610273  
PMID:15489334   PMID:16141072   PMID:16141073   PMID:16512683   PMID:16602821   PMID:21267068   PMID:21873635   PMID:23739967   PMID:24352656   PMID:26969129   PMID:28642683   PMID:28671696  
PMID:32325033  


Genomics

Comparative Map Data
Arhgap44
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,892,865 - 65,053,817 (-)NCBIGRCm39mm39
GRCm39 Ensembl1164,892,865 - 65,053,787 (-)Ensembl
GRCm381165,002,039 - 65,162,972 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1165,002,039 - 65,162,961 (-)EnsemblGRCm38mm10GRCm38
MGSCv371164,815,541 - 64,976,463 (-)NCBIGRCm37mm9NCBIm37
MGSCv361164,818,234 - 64,979,156 (-)NCBImm8
Celera1171,938,015 - 72,099,074 (-)NCBICelera
Cytogenetic Map11B3NCBI
ARHGAP44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1712,789,498 - 12,991,643 (+)EnsemblGRCh38hg38GRCh38
GRCh381712,789,498 - 12,991,644 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371712,692,815 - 12,894,960 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361712,633,554 - 12,835,685 (+)NCBINCBI36hg18NCBI36
Celera1712,718,166 - 12,920,275 (+)NCBI
Cytogenetic Map17p12NCBI
HuRef1712,588,245 - 12,790,668 (+)NCBIHuRef
CHM1_11712,701,589 - 12,903,720 (+)NCBICHM1_1
Arhgap44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21049,655,583 - 49,822,876 (-)NCBI
Rnor_6.0 Ensembl1051,502,894 - 51,669,297 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01051,501,547 - 51,669,546 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01051,259,533 - 51,425,933 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41051,313,035 - 51,479,556 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11051,328,436 - 51,494,957 (-)NCBI
Celera1048,871,532 - 49,038,827 (-)NCBICelera
Cytogenetic Map10q24NCBI
Arhgap44
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554674,430,087 - 4,522,611 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554674,428,738 - 4,590,877 (-)NCBIChiLan1.0ChiLan1.0
ARHGAP44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11743,357,438 - 43,558,355 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1743,357,438 - 43,453,457 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01738,657,824 - 38,859,591 (-)NCBIMhudiblu_PPA_v0panPan3
ARHGAP44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl536,789,814 - 36,957,411 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1536,790,059 - 36,957,932 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Arhgap44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365955,373,645 - 5,542,915 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGAP44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1257,049,895 - 57,206,889 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11257,049,900 - 57,206,706 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21260,167,786 - 60,195,211 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGAP44
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11612,125,543 - 12,328,203 (+)NCBI
ChlSab1.1 Ensembl1612,125,574 - 12,330,501 (+)Ensembl
Arhgap44
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624877662,595 - 851,762 (+)NCBI

Position Markers
AI840762  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381165,021,796 - 65,021,897UniSTSGRCm38
MGSCv371164,835,298 - 64,835,399UniSTSGRCm37
Celera1171,957,772 - 71,957,873UniSTS
Cytogenetic Map11B3UniSTS
Whitehead/MRC_RH11851.8UniSTS
AU040829  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381165,002,124 - 65,002,233UniSTSGRCm38
MGSCv371164,815,626 - 64,815,735UniSTSGRCm37
Celera1171,938,100 - 71,938,209UniSTS
Cytogenetic Map11B3UniSTS
cM Map1131.0UniSTS
Whitehead/MRC_RH11851.05UniSTS
Whitehead/MRC_RH11852.61UniSTS
RH124888  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381165,001,737 - 65,001,853UniSTSGRCm38
MGSCv371164,815,239 - 64,815,355UniSTSGRCm37
Celera1171,937,713 - 71,937,829UniSTS
Cytogenetic Map11B3UniSTS
cM Map1131.0UniSTS
UniSTS:236614  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381165,002,164 - 65,002,392UniSTSGRCm38
MGSCv371164,815,666 - 64,815,894UniSTSGRCm37
Celera1171,938,140 - 71,938,368UniSTS
Cytogenetic Map11B3UniSTS
cM Map1131.0UniSTS
RH138269  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381165,151,957 - 65,152,084UniSTSGRCm38
MGSCv371164,965,459 - 64,965,586UniSTSGRCm37
Celera1172,087,982 - 72,088,109UniSTS
Cytogenetic Map11B3UniSTS
UniSTS:224505  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381165,013,818 - 65,013,975UniSTSGRCm38
MGSCv371164,827,320 - 64,827,477UniSTSGRCm37
Celera1171,949,794 - 71,949,951UniSTS
Cytogenetic Map11B3UniSTS
RH125885  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381165,001,801 - 65,002,052UniSTSGRCm38
MGSCv371164,815,303 - 64,815,554UniSTSGRCm37
Celera1171,937,777 - 71,938,028UniSTS
Cytogenetic Map11B3UniSTS
cM Map1131.0UniSTS
Whitehead/MRC_RH11848.76UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113111738265117382Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115419011565213015Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115417484467187585Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
4141642Ltxs2_mlethal factor toxin susceptibility 2 (mouse)Not determined116315128768609504Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113220975066209867Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115936579169591873Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2558
Count of miRNA genes:625
Interacting mature miRNAs:776
Transcripts:ENSMUST00000047463, ENSMUST00000093001, ENSMUST00000093002, ENSMUST00000130420
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001099288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK032008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL663045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ059392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000047463   ⟹   ENSMUSP00000039139
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1165,002,039 - 65,162,961 (-)Ensembl
RefSeq Acc Id: ENSMUST00000093001   ⟹   ENSMUSP00000090680
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1165,051,475 - 65,162,567 (-)Ensembl
RefSeq Acc Id: ENSMUST00000093002   ⟹   ENSMUSP00000090681
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1165,002,040 - 65,162,904 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130420   ⟹   ENSMUSP00000115612
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1165,002,041 - 65,059,834 (-)Ensembl
RefSeq Acc Id: NM_001099288   ⟹   NP_001092758
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,865 - 65,053,787 (-)NCBI
GRCm381165,002,039 - 65,162,961 (-)NCBI
MGSCv371164,815,541 - 64,976,463 (-)RGD
Celera1171,938,015 - 72,099,074 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_175003   ⟹   NP_778168
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,865 - 65,053,787 (-)NCBI
GRCm381165,002,039 - 65,162,961 (-)NCBI
MGSCv371164,815,541 - 64,976,463 (-)RGD
Celera1171,938,015 - 72,099,074 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532871   ⟹   XP_006532934
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,865 - 65,053,817 (-)NCBI
GRCm381165,002,039 - 65,162,972 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532872   ⟹   XP_006532935
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,865 - 65,053,817 (-)NCBI
GRCm381165,002,039 - 65,162,972 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532873   ⟹   XP_006532936
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,865 - 65,053,817 (-)NCBI
GRCm381165,002,039 - 65,162,972 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532874   ⟹   XP_006532937
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,871 - 64,957,313 (-)NCBI
GRCm381165,002,039 - 65,066,514 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314452   ⟹   XP_017169941
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,865 - 65,053,817 (-)NCBI
GRCm381165,002,039 - 65,162,972 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245812   ⟹   XP_030101672
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,892,871 - 65,053,104 (-)NCBI
GRCm381165,002,039 - 65,162,278 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_778168   ⟸   NM_175003
- Peptide Label: isoform 2
- UniProtKB: Q5SSM3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001092758   ⟸   NM_001099288
- Peptide Label: isoform 1
- UniProtKB: Q5SSM3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532936   ⟸   XM_006532873
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006532935   ⟸   XM_006532872
- Peptide Label: isoform X2
- UniProtKB: Q5SSM3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532934   ⟸   XM_006532871
- Peptide Label: isoform X1
- UniProtKB: Q5SSM3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532937   ⟸   XM_006532874
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017169941   ⟸   XM_017314452
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_030101672   ⟸   XM_030245812
- Peptide Label: isoform X4
RefSeq Acc Id: ENSMUSP00000115612   ⟸   ENSMUST00000130420
RefSeq Acc Id: ENSMUSP00000090681   ⟸   ENSMUST00000093002
RefSeq Acc Id: ENSMUSP00000090680   ⟸   ENSMUST00000093001
RefSeq Acc Id: ENSMUSP00000039139   ⟸   ENSMUST00000047463
Protein Domains
BAR   Rho-GAP

Promoters
RGD ID:6820474
Promoter ID:MM_KWN:7892
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000093002,   ENSMUST00000093003,   NM_001099288,   NM_175003,   OTTMUST00000013122
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361164,976,076 - 64,976,576 (-)MPROMDB
RGD ID:8675036
Promoter ID:EPDNEW_M15549
Type:initiation region
Name:Arhgap44_1
Description:Mus musculus Rho GTPase activating protein 44 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381165,162,937 - 65,162,997EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2144423 AgrOrtholog
Ensembl Genes ENSMUSG00000033389 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000039139 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000090680 UniProtKB/Swiss-Prot
  ENSMUSP00000090681 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000115612 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000047463 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000093001 UniProtKB/Swiss-Prot
  ENSMUST00000093002 UniProtKB/Swiss-Prot
  ENSMUST00000130420 UniProtKB/TrEMBL
Gene3D-CATH 1.10.555.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.1270.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AH/BAR_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BAR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:216831 UniProtKB/Swiss-Prot
MGD MGI:2144423 ENTREZGENE
NCBI Gene 216831 ENTREZGENE
Pfam BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arhgap44 PhenoGen
PROSITE BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHOGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BAR UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103657 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F6T1Y2_MOUSE UniProtKB/TrEMBL
  Q5SSM3 ENTREZGENE
  Q8C090_MOUSE UniProtKB/TrEMBL
  RHG44_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q5SSM4 UniProtKB/Swiss-Prot
  Q5SSM6 UniProtKB/Swiss-Prot
  Q5SSM7 UniProtKB/Swiss-Prot
  Q7TNB9 UniProtKB/Swiss-Prot
  Q8BW90 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Arhgap44  Rho GTPase activating protein 44  AU040829  expressed sequence AU040829  Symbol and/or name change 5135510 APPROVED