ARHGAP44 (Rho GTPase activating protein 44) - Rat Genome Database

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Gene: ARHGAP44 (Rho GTPase activating protein 44) Canis lupus familiaris
Analyze
Symbol: ARHGAP44
Name: Rho GTPase activating protein 44
RGD ID: 12302901
Description: ENCODES a protein that exhibits GTPase activator activity (ortholog); phospholipid binding (ortholog); small GTPase binding (ortholog); INVOLVED IN modification of dendritic spine (ortholog); modification of postsynaptic structure (ortholog); negative regulation of filopodium assembly (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: rho GTPase-activating protein 44
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1536,790,059 - 36,957,932 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl536,789,814 - 36,957,411 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha536,933,812 - 37,101,416 (+)NCBI
ROS_Cfam_1.0536,898,675 - 37,066,421 (+)NCBI
UMICH_Zoey_3.1536,871,586 - 37,039,378 (+)NCBI
UNSW_CanFamBas_1.0536,818,449 - 36,986,578 (+)NCBI
UU_Cfam_GSD_1.0537,008,878 - 37,176,525 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
ARHGAP44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1536,790,059 - 36,957,932 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl536,789,814 - 36,957,411 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha536,933,812 - 37,101,416 (+)NCBI
ROS_Cfam_1.0536,898,675 - 37,066,421 (+)NCBI
UMICH_Zoey_3.1536,871,586 - 37,039,378 (+)NCBI
UNSW_CanFamBas_1.0536,818,449 - 36,986,578 (+)NCBI
UU_Cfam_GSD_1.0537,008,878 - 37,176,525 (+)NCBI
ARHGAP44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1712,789,498 - 12,991,643 (+)EnsemblGRCh38hg38GRCh38
GRCh381712,789,498 - 12,991,644 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371712,692,815 - 12,894,960 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361712,633,554 - 12,835,685 (+)NCBINCBI36hg18NCBI36
Celera1712,718,166 - 12,920,275 (+)NCBI
Cytogenetic Map17p12NCBI
HuRef1712,588,245 - 12,790,668 (+)NCBIHuRef
CHM1_11712,701,589 - 12,903,719 (+)NCBICHM1_1
Arhgap44
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,892,865 - 65,053,817 (-)NCBIGRCm39mm39
GRCm39 Ensembl1164,892,865 - 65,053,787 (-)Ensembl
GRCm381165,002,039 - 65,162,972 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1165,002,039 - 65,162,961 (-)EnsemblGRCm38mm10GRCm38
MGSCv371164,815,541 - 64,976,463 (-)NCBIGRCm37mm9NCBIm37
MGSCv361164,818,234 - 64,979,156 (-)NCBImm8
Celera1171,938,015 - 72,099,074 (-)NCBICelera
Cytogenetic Map11B3NCBI
Arhgap44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21049,655,583 - 49,822,876 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1049,655,584 - 49,824,297 (-)Ensembl
Rnor_6.01051,501,547 - 51,669,546 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1051,502,894 - 51,669,297 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01051,259,533 - 51,425,933 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41051,313,035 - 51,479,556 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11051,328,436 - 51,494,957 (-)NCBI
Celera1048,871,532 - 49,038,827 (-)NCBICelera
Cytogenetic Map10q24NCBI
Arhgap44
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554674,430,087 - 4,522,611 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554674,428,738 - 4,590,877 (-)NCBIChiLan1.0ChiLan1.0
ARHGAP44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11743,357,438 - 43,558,355 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1743,357,438 - 43,453,457 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01738,657,824 - 38,859,591 (-)NCBIMhudiblu_PPA_v0panPan3
Arhgap44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560251,899,406 - 52,068,726 (+)NCBI
SpeTri2.0NW_0049365955,373,645 - 5,542,915 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGAP44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1257,049,895 - 57,206,889 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11257,049,900 - 57,206,706 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21260,167,786 - 60,195,211 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGAP44
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11612,125,543 - 12,328,203 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1612,125,574 - 12,330,501 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660598,910,762 - 9,113,230 (-)NCBIVero_WHO_p1.0
Arhgap44
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624877662,595 - 851,762 (+)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 6 2 5 12 5
Low 5 16 6 4 6 6 1 8 5 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005620064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000028372   ⟹   ENSCAFP00000026386
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl536,789,814 - 36,957,411 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000066599   ⟹   ENSCAFP00000043747
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl536,789,814 - 36,957,411 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000093510   ⟹   ENSCAFP00000062720
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl536,789,814 - 36,957,411 (+)Ensembl
RefSeq Acc Id: XM_005620064   ⟹   XP_005620121
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1536,790,059 - 36,957,932 (+)NCBI
Dog10K_Boxer_Tasha536,933,812 - 37,101,416 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005620065   ⟹   XP_005620122
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1536,790,059 - 36,956,700 (+)NCBI
Dog10K_Boxer_Tasha536,933,812 - 37,100,185 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005620066   ⟹   XP_005620123
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1536,790,060 - 36,956,699 (+)NCBI
Dog10K_Boxer_Tasha536,933,812 - 37,100,184 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005620067   ⟹   XP_005620124
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1536,790,059 - 36,957,932 (+)NCBI
Dog10K_Boxer_Tasha536,933,845 - 37,101,416 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022418596   ⟹   XP_022274304
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1536,790,059 - 36,957,932 (+)NCBI
Dog10K_Boxer_Tasha536,933,844 - 37,101,416 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038475738   ⟹   XP_038331666
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1536,871,586 - 37,039,378 (+)NCBI
RefSeq Acc Id: XM_038475739   ⟹   XP_038331667
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1536,871,586 - 37,038,147 (+)NCBI
RefSeq Acc Id: XM_038475740   ⟹   XP_038331668
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1536,871,586 - 37,038,146 (+)NCBI
RefSeq Acc Id: XM_038475741   ⟹   XP_038331669
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1536,871,586 - 37,039,378 (+)NCBI
RefSeq Acc Id: XM_038475742   ⟹   XP_038331670
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1536,871,586 - 37,039,378 (+)NCBI
RefSeq Acc Id: XM_038536921   ⟹   XP_038392849
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0537,008,878 - 37,176,525 (+)NCBI
RefSeq Acc Id: XM_038536922   ⟹   XP_038392850
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0537,008,878 - 37,175,292 (+)NCBI
RefSeq Acc Id: XM_038536923   ⟹   XP_038392851
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0537,008,878 - 37,175,291 (+)NCBI
RefSeq Acc Id: XM_038536924   ⟹   XP_038392852
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0537,008,878 - 37,176,525 (+)NCBI
RefSeq Acc Id: XM_038536925   ⟹   XP_038392853
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0537,008,878 - 37,176,525 (+)NCBI
RefSeq Acc Id: XM_038601067   ⟹   XP_038456995
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0536,818,449 - 36,986,578 (+)NCBI
RefSeq Acc Id: XM_038601068   ⟹   XP_038456996
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0536,818,449 - 36,985,345 (+)NCBI
RefSeq Acc Id: XM_038601069   ⟹   XP_038456997
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0536,818,449 - 36,985,344 (+)NCBI
RefSeq Acc Id: XM_038601070   ⟹   XP_038456998
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0536,818,449 - 36,986,578 (+)NCBI
RefSeq Acc Id: XM_038601071   ⟹   XP_038456999
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0536,818,449 - 36,986,578 (+)NCBI
RefSeq Acc Id: XM_038665639   ⟹   XP_038521567
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0536,898,675 - 37,066,421 (+)NCBI
RefSeq Acc Id: XM_038665640   ⟹   XP_038521568
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0536,898,675 - 37,065,190 (+)NCBI
RefSeq Acc Id: XM_038665641   ⟹   XP_038521569
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0536,898,675 - 37,065,189 (+)NCBI
RefSeq Acc Id: XM_038665642   ⟹   XP_038521570
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0536,898,687 - 37,066,421 (+)NCBI
RefSeq Acc Id: XM_038665643   ⟹   XP_038521571
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0536,898,688 - 37,066,421 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_005620121   ⟸   XM_005620064
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005620122   ⟸   XM_005620065
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005620124   ⟸   XM_005620067
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_005620123   ⟸   XM_005620066
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022274304   ⟸   XM_022418596
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSCAFP00000026386   ⟸   ENSCAFT00000028372
RefSeq Acc Id: ENSCAFP00000062720   ⟸   ENSCAFT00000093510
RefSeq Acc Id: ENSCAFP00000043747   ⟸   ENSCAFT00000066599
RefSeq Acc Id: XP_038331666   ⟸   XM_038475738
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038331669   ⟸   XM_038475741
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038331670   ⟸   XM_038475742
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038331667   ⟸   XM_038475739
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038331668   ⟸   XM_038475740
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038456995   ⟸   XM_038601067
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038456998   ⟸   XM_038601070
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038456999   ⟸   XM_038601071
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038456996   ⟸   XM_038601068
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038456997   ⟸   XM_038601069
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038521567   ⟸   XM_038665639
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521568   ⟸   XM_038665640
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038521569   ⟸   XM_038665641
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038521570   ⟸   XM_038665642
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038521571   ⟸   XM_038665643
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038392849   ⟸   XM_038536921
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038392852   ⟸   XM_038536924
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038392853   ⟸   XM_038536925
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038392850   ⟸   XM_038536922
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038392851   ⟸   XM_038536923
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017875 Ensembl
NCBI Gene ARHGAP44 ENTREZGENE
VGNC ID VGNC:38065 ENTREZGENE