Ltxs2_m QTL Report (Mus musculus) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

QTL: Ltxs2_m (lethal factor toxin susceptibility 2 (mouse)) Mus musculus

Symbol: Ltxs2_m
Name: lethal factor toxin susceptibility 2 (mouse)
RGD ID: 4141642
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,151,287 - 68,609,504MOUSEQTLGRCm38
MGSCv371162,964,789 - 68,423,006 (+)MOUSEQTLGRCm37
cM Map1139.0MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. Mouse Genome Database (MGD)
2. RGD automated import pipeline
Additional References at PubMed
PMID:14578173  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
11125Pmp22peripheral myelin protein 22116312898263159547Mouse
10014401Gm40012predicted gene, 40012116315875263161376Mouse
2294770Gm12285predicted gene 12285116324124863241445Mouse
9648704Gm29851predicted gene, 29851116324729763250080Mouse
2294967Gm12286predicted gene 12286116331231063313323Mouse
10018039Gm40016predicted gene, 40016116344921563464063Mouse
10031705Gm40019predicted gene, 40019116361282963615792Mouse
9636857Gm29958predicted gene, 29958116361920163644382Mouse
2312235Gm12288predicted gene 12288116381701863818300Mouse
1616856Hmgb1-ps3high mobility group box 1, pseudogene 3116384609063846947Mouse
1550701Hs3st3b1heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1116388469363922284Mouse
9619477Gm30060predicted gene, 30060116395662363962390Mouse
1321107Cox10heme A:farnesyltransferase cytochrome c oxidase assembly factor 10116396262764079472Mouse
16096219630013K17RikRIKEN cDNA 9630013K17 gene116396422663968040Mouse
9665997Gm12289predicted gene 12289116400814564014488Mouse
15023453Gm51866predicted gene, 51866116403302164037246Mouse
16131882810001G20RikRIKEN cDNA 2810001G20 gene116407948464083259Mouse
9679879Gm12290predicted gene 12290116416444164182174Mouse
2313369F930015N05RikRIKEN cDNA F930015N05 gene116443313564436674Mouse
1615189Hs3st3a1heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1116443533264522835Mouse
9623880Gm30305predicted gene, 30305116466279364719258Mouse
11082127Gm12292predicted gene 12292116483934364899083Mouse
10037175Gm40025predicted gene, 40025116484277464843917Mouse
1552652Elac2elaC ribonuclease Z 2116497903065002080Mouse
1332239Arhgap44Rho GTPase activating protein 44116500203965162972Mouse
16231471700086D15RikRIKEN cDNA 1700086D15 gene116514810765159900Mouse
39128853Gm53042predicted gene, 53042116515988065170260Mouse
2312213Gm12293predicted gene 12293116516984465170364Mouse
1614957Myocdmyocardin116517360865269989Mouse
39129010LOC109279894VISTA enhancer mm67116520885565210457Mouse
9648834Gm30586predicted gene, 30586116526992565288604Mouse
5145427Gm12295predicted gene 12295116527765465287833Mouse
14997157Gm26128predicted gene, 26128116562639465626503Mouse
9610397Gm30786predicted gene, 30786116564241265660361Mouse
39128801LOC109279902VISTA enhancer mm85116564890665651643Mouse
10010091Gm40026predicted gene, 40026116565063565682492Mouse
1316001Map2k4mitogen-activated protein kinase kinase 4116568824465788359Mouse
1625986Mir744microRNA 744116573473365734832Mouse
1312983Zkscan6zinc finger with KRAB and SCAN domains 6116580715465829239Mouse
1322974Dnah9dynein, axonemal, heavy chain 9116583132466168581Mouse
10033277Gm40027predicted gene, 40027116614604366160077Mouse
1625903Gm12296predicted gene 12296116616803566301237Mouse
12859048Gm45917predicted gene, 45917116616852266426709Mouse
1614798Shisa6shisa family member 6116621172566527984Mouse
12797454Gm45945predicted gene, 45945116627369266279173Mouse
10036357Gm38644predicted gene, 38644116652780666542596Mouse
10032855Gm40028predicted gene, 40028116654694966556312Mouse
2295000Gm12297predicted gene 12297116656358966564767Mouse
39128481LOC115487897small nucleolar RNA SNORA48116689244066892578Mouse
1624511Gm12298predicted gene 12298116690563266947086Mouse
9620835Gm29712predicted gene, 29712116690755266908363Mouse
1619036Pirtphosphoinositide-interacting regulator of transient receptor potential channels116691190566929877Mouse
1623946Tmem238ltransmembrane protein 238 like116695509266965016Mouse
9999710Gm12299predicted gene 12299116700208667012198Mouse
1319987Tmem220transmembrane protein 220116702515467035312Mouse
1332389AdprmADP-ribose/CDP-alcohol diphosphatase, manganese dependent116703788067052631Mouse
1617578Sco1SCO1 cytochrome c oxidase assembly protein116705260067067444Mouse
10950Myh3myosin, heavy polypeptide 3, skeletal muscle, embryonic116707827367102291Mouse
9644122Mir6923microRNA 6923116709980467099875Mouse
16135142310065F04RikRIKEN cDNA 2310065F04 gene116711246167120080Mouse
9616641Gm31285predicted gene, 31285116713493767143944Mouse
1616843Myh2myosin, heavy polypeptide 2, skeletal muscle, adult116717102767197517Mouse
1550486Myh1myosin, heavy polypeptide 1, skeletal muscle, adult116720010267224577Mouse
9594329Myhasmyosin heavy chain gene antisense RNA116722419667237281Mouse
1616842Myh4myosin, heavy polypeptide 4, skeletal muscle116723781267260447Mouse
1616841Myh8myosin, heavy polypeptide 8, skeletal muscle, perinatal116727712467308634Mouse
7488816n-TPtgg2nuclear encoded tRNA proline 2 (anticodon TGG)116729113967291210Mouse
737051Myh13myosin, heavy polypeptide 13, skeletal muscle116732710367371587Mouse
10012600Gm40029predicted gene, 40029116734877167350452Mouse
9657290Gm31459predicted gene, 31459116743574067435922Mouse
1552259Gas7growth arrest specific 7116745325767688992Mouse
735703Glp2rglucagon-like peptide 2 receptor116766415667771184Mouse
734066Rcvrnrecoverin116769532667703355Mouse
2293965Gsg1l2GSG1-like 2116777460867789898Mouse
1315918Dhrs7cdehydrogenase/reductase (SDR family) member 7C116779827167816002Mouse
10025671Gm40032predicted gene, 40032116781788267844519Mouse
1317759Usp43ubiquitin specific peptidase 43116785452367922153Mouse
1621503Cfap52cilia and flagella associated protein 52116792480667965669Mouse
62210Stx8syntaxin 8116796641168207148Mouse
3962427Gm12304predicted gene 12304116809554968096001Mouse
5135894Gm20169predicted gene, 20169116814988368151887Mouse
1612528C78197expressed sequence C78197116819182968196153Mouse
735502Ntn1netrin 1116820936468386826Mouse
9645696Mir6406microRNA 6406116822089268221011Mouse
9606279Gm31954predicted gene, 31954116839940768408834Mouse
9675646Gm32046predicted gene, 32046116843068868432085Mouse
1620477Pik3r5phosphoinositide-3-kinase regulatory subunit 5116843212568497849Mouse
1618254Pik3r6phosphoinositide-3-kinase regulatory subunit 5116850301968552698Mouse
1317149Mfsd6lmajor facilitator superfamily domain containing 6-like116855618668558245Mouse
10007338Gm40036predicted gene, 40036116856223568572414Mouse
1608673Ccdc42oscoiled-coil domain containing 42, opposite strand116858326468586957Mouse
1623720Ccdc42coiled-coil domain containing 42116858703768597951Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
4920433D11Mit88254116315128763151537Mouseregion
5011867Pmp22440116315315363153592Mouseregion
4962521RH138695226116315825263158477Mouseregion
5011863Pmp22325116315825363158578Mouseregion
5011859Pmp22377116315866563159293Mouseregion
4934224M32240104116315887263158975Mouseregion
5011875Pmp22-rs204116315919663159399Mouseregion
4948613UniSTS:236599202116322709363227294Mouseregion
4920294D11Mit35096116329434163294436Mouseregion
4954314D11Mit242116116342858163428696Mouseregion
4919858D11Mit156112116351040863510519Mouseregion
4948611UniSTS:236598235116388421263884446Mouseregion
4934222AU04188296116388421363884308Mouseregion
4905503AW536289137116388610063886236Mouseregion
5134542Hs3st3b1171116388915563889325Mouseregion
5134507Hs3st3b1230116392145863921687Mouseregion
4948633UniSTS:236610203116396295063963152Mouseregion
4905507AU042636107116396300663963112Mouseregion
4896434AW549955150116396309063963239Mouseregion
4920274D11Mit339125116399293763993061Mouseregion
4955126G54543402116401148564011886Mouseregion
493422644.MMHAP54FLG5.seq162116401157764011738Mouseregion
4948641UniSTS:23661296116407963964079734Mouseregion
4948637UniSTS:236611323116408052964080851Mouseregion
4905505AW04551496116408283264082927Mouseregion
4963717UniSTS:224567101116419289364192993Mouseregion
4964515UniSTS:224998101116436262664362726Mouseregion
5134542Hs3st3b1171116452061864520788Mouseregion
4896438BB223315111116452261564522725Mouseregion
493423219.MMHAP59FLG1.seq164116486267364862836Mouseregion
4934230MHAa75e3.seq159116493592464936082Mouseregion
4937399RH124888117116500173765001853Mouseregion
5007763RH125885250116500180165002052Mouseregion
4934234AU040829110116500212465002233Mouseregion
4948639UniSTS:236614229116500216465002392Mouseregion
4963605UniSTS:224505158116501381865013975Mouseregion
4905509AI840762102116502179665021897Mouseregion
4962471RH138269128116515195765152084Mouseregion
4948645UniSTS:236616250116517461765174866Mouseregion
4939848Myocd442116517844865178889Mouseregion
4980440PMC309615P2144116518448865184631Mouseregion
4953182PMC150745P1109116518702765187135Mouseregion
4980438PMC309615P1294116518739265187685Mouseregion
4919910D11Mit177131116521288565213015Mouseregion
4920124D11Mit276134116533065765330790Mouseregion
491352912_5_5_9.seq192116555336165553552Mouseregion
491498729.MMHAP81FLB5.seq154116559507265595224Mouseregion
4978631Map2k4988116568854165689528Mouseregion
4918574U18310179116569043465690612Mouseregion
4964990UniSTS:225260152116570971265709863Mouseregion
49166619_15_91.seq155116571024965710403Mouseregion
4896440C86896238116571424665714483Mouseregion
4912360Zkscan6427116582814065828566Mouseregion
4912360Zkscan6427116582814065828649Mouseregion
4948647UniSTS:236617197116582871165828907Mouseregion
4960949D11Ertd714e238116582878565829022Mouseregion
4948643UniSTS:23661592116582881165828902Mouseregion
4948651UniSTS:236618230116612115066121379Mouseregion
4960945AU015669200116612123766121437Mouseregion
4919943D11Mit193134116633751966337653Mouseregion
4919767D11Mit113145116655016366550307Mouseregion
4965014UniSTS:225271176116682390166824076Mouseregion
4919982D11Mit20995116690917466909268Mouseregion
491599140.MMHAP72FLF4.seq196116697349366973688Mouseregion
5006214475D1T7158116699140566991561Mouseregion
4948649UniSTS:236619200116701306667013265Mouseregion
5007549D11Bwg1310e114116706478667064899Mouseregion
4952856PMC133998P1801116708228667082992Mouseregion
4951183Myh3155116710163667102264Mouseregion
7194983Myh3100116710216467102265Mouseregion
4920431D11Mit89149116712600567126153Mouseregion
4971143AA955378149116713517967135333Mouseregion
7202339Myh2300116717302767173394Mouseregion
5001835D11Mit50116718736567187585Mouseregion
4971595Myh2143116719737667197518Mouseregion
7202351Myh2100116719741767197508Mouseregion
7202347Myh1200116720182567202136Mouseregion
5006186380N16T7120116720674667206865Mouseregion
4967082Myh1148116722056367220710Mouseregion
7199085Myh1121116722447567224595Mouseregion
5006270630D9T7328116723220967232536Mouseregion
5011467Myh13300116723735267237573Mouseregion
7202353Myh1104116723771567237818Mouseregion
5006210433B7T7109116725666067256768Mouseregion
4967084Myh4240116725934367260384Mouseregion
7199086Myh4121116726028567260405Mouseregion
4908701AI506973117116726030067260416Mouseregion
5013236fd14a01.x1304116729238567292688Mouseregion
5006246561O14T7366116730357467303938Mouseregion
4951204Myh8294116730688367308537Mouseregion
7194984Myh8100116730848467308582Mouseregion
4959785AI32726798116730848567308582Mouseregion
5006192386N23T7185116730862467308808Mouseregion
491368914.MMHAP68FLE2.seq153116732036167320513Mouseregion
5006278645M6T7218116732871967328943Mouseregion
5006212410O9T7177116733612967336312Mouseregion
4920296D11Mit351109116751704967517157Mouseregion
5010296Gas7542116753290167533461Mouseregion
5006232524K7T7299116756368967563986Mouseregion
4920174D11Mit297125116762496767625091Mouseregion
4919771D11Mit11597116763917267639268Mouseregion
4934236U19860128116768417667684303Mouseregion
4905511AW124766148116768471867684865Mouseregion
4896442AU040984144116768851367688656Mouseregion
4962811RH140925207116768852267688728Mouseregion
5004813RCV1277116769550767695783Mouseregion
4984037PMC60082P1229116770949067709718Mouseregion
4905515AI120487133116780089567801027Mouseregion
4953985AU028141232116801615668016387Mouseregion
4920108D11Mit27.1141116805653568056675Mouseregion
4920106P740116805669068056791Mouseregion
4956017RH126321234116819271668192949Mouseregion
4948653UniSTS:236621252116820962968209880Mouseregion
4908703AI561871101116820964068209741Mouseregion
4948655UniSTS:236622323116821189668212218Mouseregion
49141291_16-1.seq163116842872568428887Mouseregion
4923055D17Mit144144116850072668500869Mouseregion
4920122D11Mit277124116855168868551811Mouseregion
4908705BB22038095116855246068552554Mouseregion
4920134D11Mit28149116856036068560508Mouseregion
5003790D11Mit4249116860925768609504Mouseregion

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5417484463428696Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113111738265117382Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115419011565213015Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115417484467187585Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
4141642Ltxs2_mlethal factor toxin susceptibility 2 (mouse)Not determined116315128768609504Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113220975066209867Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115936579169591873Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:3609213 MouseQtl

RGD Curation Notes
Note Type Note Reference