Nsg1 (neuron specific gene family member 1) - Rat Genome Database

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Gene: Nsg1 (neuron specific gene family member 1) Mus musculus
Analyze
Symbol: Nsg1
Name: neuron specific gene family member 1
RGD ID: 10250
MGI Page MGI
Description: Predicted to enable clathrin light chain binding activity and ionotropic glutamate receptor binding activity. Involved in several processes, including amyloid precursor protein metabolic process; neurotransmitter receptor transport; and receptor recycling. Located in late endosome; lateral plasma membrane; and postsynaptic membrane. Is active in glutamatergic synapse. Is expressed in several structures, including central nervous system; genitourinary system; gut; peripheral nervous system ganglion; and sensory organ. Orthologous to human NSG1 (neuronal vesicle trafficking associated 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: brain neuron cytoplasmic protein 1; m234; NEEP; Neep21; neuron-enriched endosomal protein of 21 kDa; neuron-specific protein family member 1; neuronal vesicle trafficking-associated protein 1; p2; p21
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39538,294,537 - 38,317,087 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl538,294,536 - 38,317,251 (-)EnsemblGRCm39 Ensembl
GRCm38538,137,193 - 38,159,743 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl538,137,192 - 38,159,907 (-)EnsemblGRCm38mm10GRCm38
MGSCv37538,528,432 - 38,550,706 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36538,425,442 - 38,447,716 (-)NCBIMGSCv36mm8
Celera535,587,097 - 35,609,344 (-)NCBICelera
Cytogenetic Map5B3NCBI
cM Map520.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
C60 fullerene  (ISO)
choline  (EXP)
cisplatin  (ISO)
clobetasol  (EXP)
deguelin  (ISO)
dibutyl phthalate  (ISO)
diethyl phthalate  (ISO)
diisobutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
L-methionine  (EXP)
lead diacetate  (ISO)
levonorgestrel  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
oxaliplatin  (ISO)
oxidopamine  (ISO)
ozone  (EXP)
paracetamol  (ISO)
pentanal  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
progesterone  (ISO)
propanal  (ISO)
quercetin 3-O-beta-D-glucofuranoside  (ISO)
quercetin 3-O-beta-D-glucopyranoside  (ISO)
rutin  (ISO)
SB 431542  (ISO)
sunitinib  (ISO)
testosterone undecanoate  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
Trapidil  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9013775   PMID:9461575   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11597144   PMID:12070131   PMID:12477932   PMID:15187090   PMID:15489334   PMID:15582152   PMID:15870395  
PMID:15890332   PMID:16037816   PMID:16141072   PMID:16141073   PMID:16602821   PMID:19063943   PMID:19554387   PMID:20808911   PMID:21084623   PMID:21267068   PMID:21873635   PMID:24194600  
PMID:27626380   PMID:28299779   PMID:28705898   PMID:28874679   PMID:34321999   PMID:35577358   PMID:37524711  


Genomics

Comparative Map Data
Nsg1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39538,294,537 - 38,317,087 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl538,294,536 - 38,317,251 (-)EnsemblGRCm39 Ensembl
GRCm38538,137,193 - 38,159,743 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl538,137,192 - 38,159,907 (-)EnsemblGRCm38mm10GRCm38
MGSCv37538,528,432 - 38,550,706 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36538,425,442 - 38,447,716 (-)NCBIMGSCv36mm8
Celera535,587,097 - 35,609,344 (-)NCBICelera
Cytogenetic Map5B3NCBI
cM Map520.21NCBI
NSG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3844,386,532 - 4,419,058 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl44,348,140 - 4,419,058 (+)EnsemblGRCh38hg38GRCh38
GRCh3744,388,259 - 4,420,785 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3644,438,884 - 4,471,686 (+)NCBINCBI36Build 36hg18NCBI36
Build 3444,506,823 - 4,538,856NCBI
Celera44,285,777 - 4,318,783 (+)NCBICelera
Cytogenetic Map4p16.3NCBI
HuRef44,323,846 - 4,356,408 (+)NCBIHuRef
CHM1_144,385,947 - 4,418,741 (+)NCBICHM1_1
T2T-CHM13v2.044,350,456 - 4,388,523 (+)NCBIT2T-CHM13v2.0
Nsg1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81476,861,079 - 76,882,822 (+)NCBIGRCr8
mRatBN7.21472,648,771 - 72,670,521 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1472,648,741 - 72,670,514 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1477,090,481 - 77,112,223 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01478,331,349 - 78,353,091 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01474,771,417 - 74,793,159 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01477,380,264 - 77,402,007 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1477,380,262 - 77,401,996 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01477,362,126 - 77,383,869 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41477,931,947 - 77,953,690 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11477,934,337 - 77,956,080 (+)NCBI
Celera1471,598,968 - 71,620,711 (+)NCBICelera
Cytogenetic Map14q21NCBI
Nsg1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555145,273,810 - 5,295,710 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555145,273,810 - 5,294,925 (-)NCBIChiLan1.0ChiLan1.0
NSG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v234,652,831 - 4,683,301 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan144,585,813 - 4,616,317 (+)NCBINHGRI_mPanPan1
PanPan1.144,467,232 - 4,496,088 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl44,467,234 - 4,496,088 (+)Ensemblpanpan1.1panPan2
NSG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1369,805,646 - 69,831,200 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl369,805,592 - 69,831,194 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha372,354,015 - 72,382,936 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0370,558,811 - 70,587,730 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1369,832,775 - 69,861,668 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0369,997,988 - 70,026,875 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0370,379,404 - 70,408,307 (+)NCBIUU_Cfam_GSD_1.0
Nsg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528563,323,364 - 63,344,659 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647717,025,044 - 17,046,014 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647717,025,057 - 17,046,353 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NSG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl86,000,057 - 6,024,769 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.186,000,054 - 6,023,379 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
NSG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12740,544,037 - 40,576,479 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2740,544,701 - 40,579,108 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604787,345,154 - 87,377,591 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nsg1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475521,506,250 - 21,529,052 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475521,507,068 - 21,529,057 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nsg1
970 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:612
Count of miRNA genes:401
Interacting mature miRNAs:471
Transcripts:ENSMUST00000031009
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301806Actd2_mactivity-distance traveled 2 (mouse)Not determined5538452039384652Mouse
4141207Imrfq1_mimmune response to Factor IX QTL 1 (mouse)Not determined5812411742124239Mouse
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
1357478Kdnw1_mkidney weight 1 (mouse)Not determined5891594940529869Mouse
14696730Kidlq1_mkidney weight, left QTL 1 (mouse)51356315247563152Mouse
1301685Estq2_mestradiol regulated response QTL 2 (mouse)Not determined51563408449634190Mouse
1300719Iba5_minduction of brown adipocytes 5 (mouse)Not determined52068699354687134Mouse
1301776Skts3_mskin tumor susceptibility 3 (mouse)Not determined52166729555667403Mouse
11537368Hmtb10_mhemostasis and thrombosis 10 (mouse)52210082354500318Mouse
11537367Hmtb11_mhemostasis and thrombosis 11 (mouse)52210082364806579Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
1300701Cd8ts1_mCD8 T cell subset 1 (mouse)Not determined52721534861215451Mouse
1301555Alcp10_malcohol preference locus 10 (mouse)Not determined53102427565024480Mouse
1301403Alcp9_malcohol preference locus 9 (mouse)Not determined53102427565024480Mouse
11353827Hplq1_mhot plate latency 1 (mouse)53157045865570458Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
10043995Hbnr9_mHeligmosomoides bakeri nematode resistance 9 (mouse)Not determined53348866767488876Mouse
1301845Lxw4_mlupus BXSB x NZW 4 (mouse)Not determined53569446269694594Mouse
11049561Lmr24e_mleishmaniasis resistance 24e (mouse)53569446269694594Mouse
11049559Lmr24c_mleishmaniasis resistance 24c (mouse)53569446269694594Mouse
11049558Lmr24b_mleishmaniasis resistance 24b (mouse)53569446269694594Mouse
1301223Hdlq7_mHDL QTL 7 (mouse)Not determined53585456869854714Mouse
13464252Ahl10_mage related hearing loss, early onset 10 (mouse)53585456869854714Mouse
4141647Hrvhf1_mheart rate variability, high frequency 1 (mouse)Not determined3643342370433423Mouse
1301170Lith13_mlithogenic gene 13 (mouse)Not determined53649448670494598Mouse
36049766Ars22_mantibody response to SARS-CoV 22, day 29, IgG3 (mouse)53695734445457342Mouse
36049767Ars23_mantibody response to SARS-CoV 23, day 29, Total IgG (mouse)53695734445457342Mouse
36049768Ars24_mantibody response to SARS-CoV 24, 4 days post-rechallenge, IgG3 (mouse)53695734445457342Mouse
36049769Ars13_mantibody response to SARS-CoV 13, day 7, IgG2a+IgG2c (mouse)53695734445457342Mouse
36049770Ars14_mantibody response to SARS-CoV 14, day 7, IgG3 (mouse)53695734445457342Mouse
36049771Ars15_mantibody response to SARS-CoV 15, day 7, IgM (mouse)53695734445457342Mouse
36049772Ars20_mantibody response to SARS-CoV 20, day 15, Total IgG (mouse)53695734445457342Mouse
36049773Ars21_mantibody response to SARS-CoV 21, day 29, IgG2a+IgG2c (mouse)53695734445457342Mouse
36049774Ars16_mantibody response to SARS-CoV 16, day 7, Total IgG (mouse)53695734445457342Mouse
36049775Ars17_mantibody response to SARS-CoV 17, day 15, IgG2a+IgG2c (mouse)53695734445457342Mouse
36049776Ars18_mantibody response to SARS-CoV 18, day 15, IgG3 (mouse)53695734445457342Mouse
36049777Ars19_mantibody response to SARS-CoV 19, day 15, IgM (mouse)53695734445457342Mouse
35673310Ari4_mantibody response to influenza 4, day 15-45, IgG2b (mouse)53695734445457342Mouse
1300926Hpi2_mhepatic PMN infiltration 2 (mouse)Not determined53758148864806579Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
13464246Ahl11_mage related hearing loss, early onset 11 (mouse)53764377771643896Mouse
1300951Gbvq1_mgallstone bladder volume QTL 1 (mouse)Not determined53811168172111798Mouse
13464245Ahl12_mage related hearing loss, early onset 12 (mouse)53811168172111798Mouse

Markers in Region
D5Dmo3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38538,167,229 - 38,167,327UniSTSGRCm38
MGSCv37538,558,468 - 38,558,566UniSTSGRCm37
Celera535,617,049 - 35,617,147UniSTS
Cytogenetic Map5B3UniSTS
cM Map521.0UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000031009   ⟹   ENSMUSP00000031009
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl538,294,536 - 38,317,251 (-)Ensembl
GRCm38.p6 Ensembl538,137,192 - 38,159,907 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201134   ⟹   ENSMUSP00000144585
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl538,316,250 - 38,316,749 (-)Ensembl
GRCm38.p6 Ensembl538,158,906 - 38,159,405 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201341   ⟹   ENSMUSP00000144641
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl538,302,058 - 38,316,706 (-)Ensembl
GRCm38.p6 Ensembl538,144,714 - 38,159,362 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201363   ⟹   ENSMUSP00000144396
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl538,295,887 - 38,316,749 (-)Ensembl
GRCm38.p6 Ensembl538,138,543 - 38,159,405 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201415   ⟹   ENSMUSP00000143921
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl538,295,600 - 38,316,375 (-)Ensembl
GRCm38.p6 Ensembl538,138,256 - 38,159,031 (-)Ensembl
RefSeq Acc Id: ENSMUST00000202129   ⟹   ENSMUSP00000144182
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl538,295,479 - 38,296,173 (-)Ensembl
GRCm38.p6 Ensembl538,138,135 - 38,138,829 (-)Ensembl
RefSeq Acc Id: ENSMUST00000202831
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl538,312,677 - 38,316,817 (-)Ensembl
GRCm38.p6 Ensembl538,155,333 - 38,159,473 (-)Ensembl
RefSeq Acc Id: NM_001359090   ⟹   NP_001346019
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39538,294,537 - 38,317,087 (-)NCBI
GRCm38538,137,193 - 38,159,743 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359091   ⟹   NP_001346020
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39538,294,537 - 38,317,087 (-)NCBI
GRCm38538,137,193 - 38,159,743 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359092   ⟹   NP_001346021
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39538,294,537 - 38,317,087 (-)NCBI
GRCm38538,137,193 - 38,159,743 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010942   ⟹   NP_035072
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39538,294,537 - 38,317,087 (-)NCBI
GRCm38538,137,193 - 38,159,743 (-)NCBI
MGSCv37538,528,432 - 38,550,706 (-)RGD
Celera535,587,097 - 35,609,344 (-)RGD
cM Map5 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_035072   ⟸   NM_010942
- UniProtKB: Q3UF63 (UniProtKB/Swiss-Prot),   O54717 (UniProtKB/Swiss-Prot),   Q922E5 (UniProtKB/Swiss-Prot),   Q62092 (UniProtKB/Swiss-Prot),   Q8C5M2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001346021   ⟸   NM_001359092
- UniProtKB: Q62092 (UniProtKB/Swiss-Prot),   Q3UF63 (UniProtKB/Swiss-Prot),   O54717 (UniProtKB/Swiss-Prot),   Q922E5 (UniProtKB/Swiss-Prot),   Q8C5M2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346020   ⟸   NM_001359091
- UniProtKB: Q62092 (UniProtKB/Swiss-Prot),   Q3UF63 (UniProtKB/Swiss-Prot),   O54717 (UniProtKB/Swiss-Prot),   Q922E5 (UniProtKB/Swiss-Prot),   Q8C5M2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346019   ⟸   NM_001359090
- UniProtKB: Q62092 (UniProtKB/Swiss-Prot),   Q3UF63 (UniProtKB/Swiss-Prot),   O54717 (UniProtKB/Swiss-Prot),   Q922E5 (UniProtKB/Swiss-Prot),   Q8C5M2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000144182   ⟸   ENSMUST00000202129
RefSeq Acc Id: ENSMUSP00000031009   ⟸   ENSMUST00000031009
RefSeq Acc Id: ENSMUSP00000144641   ⟸   ENSMUST00000201341
RefSeq Acc Id: ENSMUSP00000144585   ⟸   ENSMUST00000201134
RefSeq Acc Id: ENSMUSP00000144396   ⟸   ENSMUST00000201363
RefSeq Acc Id: ENSMUSP00000143921   ⟸   ENSMUST00000201415

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q62092-F1-model_v2 AlphaFold Q62092 1-185 view protein structure

Promoters
RGD ID:6886576
Promoter ID:EPDNEW_M6739
Type:initiation region
Name:Nsg1_1
Description:Mus musculus neuron specific gene family member 1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38538,159,467 - 38,159,527EPDNEW
RGD ID:6837604
Promoter ID:MM_KWN:42099
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:NM_010942,   XM_001474616_GM2750
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36538,550,439 - 38,550,939 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109149 AgrOrtholog
Ensembl Genes ENSMUSG00000029126 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000031009 ENTREZGENE
  ENSMUST00000031009.8 UniProtKB/Swiss-Prot
  ENSMUST00000201134.2 UniProtKB/TrEMBL
  ENSMUST00000201341.2 UniProtKB/TrEMBL
  ENSMUST00000201363 ENTREZGENE
  ENSMUST00000201363.4 UniProtKB/Swiss-Prot
  ENSMUST00000201415.4 UniProtKB/TrEMBL
  ENSMUST00000202129.2 UniProtKB/TrEMBL
InterPro NSG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18196 UniProtKB/Swiss-Prot
MGD MGI:109149 ENTREZGENE
NCBI Gene 18196 ENTREZGENE
PANTHER NEURONAL VESICLE TRAFFICKING-ASSOCIATED PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR28546 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Calcyon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nsg1 PhenoGen
PIRSF Calcyon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0J9YTZ4_MOUSE UniProtKB/TrEMBL
  A0A0J9YUH3_MOUSE UniProtKB/TrEMBL
  A0A0J9YVB5_MOUSE UniProtKB/TrEMBL
  A0A0J9YVF8_MOUSE UniProtKB/TrEMBL
  NSG1_MOUSE UniProtKB/Swiss-Prot
  O54717 ENTREZGENE
  Q3UF63 ENTREZGENE
  Q62092 ENTREZGENE
  Q8C5M2 ENTREZGENE, UniProtKB/TrEMBL
  Q922E5 ENTREZGENE
UniProt Secondary O54717 UniProtKB/Swiss-Prot
  Q3UF63 UniProtKB/Swiss-Prot
  Q922E5 UniProtKB/Swiss-Prot