Gphn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 12 | 78,264,099 - 78,731,546 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 78,273,153 - 78,731,546 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 78,217,325 - 78,684,772 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 78,226,379 - 78,684,772 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 79,327,642 - 79,785,759 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 79,145,574 - 79,603,578 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 79,690,472 - 80,148,022 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | C3 | NCBI | | | | | cM Map | 12 | 35.51 | NCBI | | | | |
|
GPHN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 14 | 66,508,147 - 67,735,355 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 66,507,407 - 67,181,803 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 66,974,865 - 67,648,520 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 66,043,878 - 66,718,278 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 66,044,988 - 66,718,268 | NCBI | | | | | Celera | 14 | 47,033,183 - 47,707,584 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q23.3-q24.1 | NCBI | | | | | HuRef | 14 | 47,144,073 - 47,817,837 (+) | NCBI | | HuRef | | | CHM1_1 | 14 | 66,912,247 - 67,587,111 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 60,715,132 - 61,942,473 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Gphn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 102,687,405 - 103,216,679 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 96,954,365 - 97,483,617 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 96,892,148 - 97,483,612 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 97,388,022 - 97,920,426 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 97,687,169 - 98,219,588 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 97,077,693 - 97,599,233 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 101,327,874 - 101,859,169 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 101,532,518 - 101,859,164 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 110,709,516 - 111,190,440 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Rnor_5.0 | 6 | 111,210,069 - 111,237,661 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 100,833,004 - 101,302,957 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 100,836,459 - 101,306,408 (+) | NCBI | | | | | Celera | 6 | 95,358,601 - 95,872,910 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q24 | NCBI | | | | |
|
Gphn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955466 | 3,016,479 - 3,526,231 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955466 | 3,017,474 - 3,526,375 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
GPHN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 15 | 67,610,429 - 68,285,563 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 66,828,972 - 67,502,075 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 47,081,527 - 47,755,182 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 65,963,473 - 66,634,550 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 66,137,166 - 66,634,550 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
GPHN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 8 | 40,585,625 - 41,204,007 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 40,585,883 - 41,203,245 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 40,270,522 - 40,895,744 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 40,807,578 - 41,430,716 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 40,807,424 - 41,430,706 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 40,427,159 - 41,049,600 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 40,497,926 - 41,123,844 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 40,856,432 - 41,482,422 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Gphn (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 63,626,233 - 64,220,771 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936495 | 9,972,007 - 10,564,591 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936495 | 9,970,683 - 10,565,467 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
GPHN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 90,346,714 - 90,916,455 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 90,345,726 - 90,913,625 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 96,902,547 - 97,222,781 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
GPHN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 24 | 43,702,384 - 44,421,890 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 43,880,344 - 44,422,276 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 31,896,980 - 32,651,860 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Gphn (Heterocephalus glaber - naked mole-rat) |
|