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ONTOLOGY REPORT - ANNOTATIONS

Term:symbiont entry into host cell
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Accession:GO:0046718 term browser browse the term
Definition:The process by which a symbiont breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the symbiont or its genome is released into the host cell.
Comment:Viral attachment to the host cell is not part of viral entry in GO because virus attachment does not always lead to viral entry: attachment can also result in the virion being carried by the host cell to another location.
Synonyms:narrow_synonym: entry of virus into host cell;   phage translocation;   viral entry into host cell;   viral penetration;   virion penetration;   virion penetration into host cell;   virus entry into host cell
 alt_id: GO:0019063
 xref: VZ:936 "Virus entry"


show annotations for term's descendants           Sort by:
symbiont entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 GO_REF:0000107
(PMID:33163980)
(PMID:16051304), (PMID:33163980)		 Ensembl
RGD		 PMID:16051304 PMID:33163980 GO_REF:0000107 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977 		JBrowse link
G Avp arginine vasopressin involved_in ISO (PMID:33713620) RGD PMID:33713620 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:43,046,531...43,059,046
Ensembl chr13:43,046,267...43,057,792 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Cd209d CD209d molecule involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:1,891,109...1,897,559
Ensembl chr12:1,891,113...1,901,171 		JBrowse link
G Cd300ld Cd300 molecule-like family member D involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,082,957...100,115,853
Ensembl chr10:100,083,490...100,115,821 		JBrowse link
G Cd300lf Cd300 molecule-like family member F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,359,942...100,376,130
Ensembl chr10:100,359,943...100,376,041 		JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831 		JBrowse link
G Cd81 Cd81 molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660 		JBrowse link
G Cldn1 claudin 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724 		JBrowse link
G Cldn6 claudin 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:12,710,302...12,713,987
Ensembl chr10:12,709,960...12,715,973 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:16051304), (PMID:24623090) RGD PMID:16051304 PMID:24623090 NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in ISO (PMID:15479853), (PMID:24623090), (PMID:32766577) RGD PMID:15479853 PMID:24623090 PMID:32766577 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:69,407,125...69,416,872
Ensembl chr 4:69,407,835...69,416,859 		JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO		 GO_REF:0000107
(MGI:5640952|PMID:15831716)		 Ensembl
RGD		 PMID:15831716 GO_REF:0000107 MGI:5640952 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343) RGD PMID:16339146 PMID:18562523 PMID:26953343 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Dag1 dystroglycan 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:46,962,233...47,043,870
Ensembl chr 3:46,962,243...47,043,901 		JBrowse link
G Dppa1 developmental pluripotency associated 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,998,049...31,017,756
Ensembl chr10:30,998,049...31,017,756 		JBrowse link
G ENSRNOG00000067229 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:83,921,470...83,930,590 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) RGD PMID:20202662 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21501828)		 UniProt
RGD		 PMID:21501828 GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) RGD PMID:15650194 NCBI chr11:41,898,300...41,899,646
Ensembl chr11:41,898,356...41,900,441 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO
IEA		 (PMID:23029581)
GO_REF:0000107		 RGD
Ensembl		 PMID:23029581 GO_REF:0000107 NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,118,667...31,151,730
Ensembl chr10:31,119,088...31,151,698 		JBrowse link
G Havcr1l1 hepatitis A virus cellular receptor 1 like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,919,860...30,941,388
Ensembl chr10:30,923,809...30,941,108 		JBrowse link
G Havcr1l2 hepatitis A virus cellular receptor 1 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,963,058...30,983,169
Ensembl chr10:30,968,739...30,981,979 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
IEA		 facilitates
GO_REF:0000108		 GOC
RGD		 PMID:12584308 GO_REF:0000108, RGD:633153 NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850 		JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:19,922,409...19,960,495
Ensembl chr 8:19,922,460...19,960,350 		JBrowse link
G Insr insulin receptor involved_in ISO (PMID:17001305) RGD PMID:17001305 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Itgav integrin subunit alpha V involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:68,838,514...68,926,653
Ensembl chr 3:68,838,189...68,926,639 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:12584355 RGD:1599797 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:54,362,712...54,469,351
Ensembl chr11:54,364,487...54,462,519 		JBrowse link
G Nectin4 nectin cell adhesion molecule 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:83,802,589...83,821,711
Ensembl chr13:83,803,184...83,821,709 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)		 RGD PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049 		JBrowse link
G Phb1 prohibitin 1 involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:79,561,294...79,576,700
Ensembl chr 1:79,546,879...79,576,715 		JBrowse link
G Serpinb3 serpin family B member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:23,274,120...23,280,660
Ensembl chr13:23,274,484...23,313,682 		JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) RGD PMID:12857889 NCBI chr 3:118,287,988...118,307,125
Ensembl chr 3:118,287,988...118,306,850 		JBrowse link
G Siva1 SIVA1, apoptosis-inducing factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:131,705,323...131,709,697
Ensembl chr 6:131,705,323...131,709,690 		JBrowse link
G Slc20a2 solute carrier family 20 member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:69,460,850...69,551,418
Ensembl chr16:69,460,462...69,521,711 		JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:30341327)		 Ensembl
RGD		 PMID:30341327 GO_REF:0000107 NCBI chr 1:205,604,468...205,618,931
Ensembl chr 1:205,604,468...205,618,931 		JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:6,628,288...6,703,849
Ensembl chr12:6,628,007...6,703,849 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of
acts_upstream_of_positive_effect		 ISO (PMID:22573858)
(PMID:33163980)		 RGD PMID:22573858 PMID:33163980 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,060,308...31,101,262
Ensembl chr10:31,060,326...31,094,623 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142 		JBrowse link
G Uvrag UV radiation resistance associated acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Vamp8 vesicle-associated membrane protein 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24550300)
GO_REF:0000107		 RGD
Ensembl		 PMID:24550300 GO_REF:0000107 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897 		JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964 		JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:67,441,205...67,585,950
Ensembl chr13:67,446,380...67,585,946 		JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:115,292,431...115,305,798
Ensembl chr 2:115,292,516...115,303,628 		JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO
IBA		 (PMID:12857889)
GO_REF:0000033		 RGD
GO_Central		 PMID:12857889 GO_REF:0000033 NCBI chr 3:118,287,988...118,307,125
Ensembl chr 3:118,287,988...118,306,850 		JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jpt2 Jupiter microtubule associated homolog 2 involved_in ISO (PMID:15094197) RGD PMID:15094197 NCBI chr10:13,963,135...13,983,212
Ensembl chr10:13,963,137...13,983,170 		JBrowse link
G Tpcn1 two pore segment channel 1 involved_in ISO
IEA		 (PMID:25722412)
GO_REF:0000107
(MGI:6716961|PMID:25722412)		 RGD
Ensembl		 PMID:25722412 GO_REF:0000107 MGI:6716961 NCBI chr12:35,972,813...36,029,632
Ensembl chr12:35,972,846...36,029,626 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO
IBA		 (PMID:25722412)
GO_REF:0000033
(MGI:6716961|PMID:25722412)		 RGD
GO_Central		 PMID:25722412 GO_REF:0000033 MGI:6716961 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236 		JBrowse link
negative regulation of fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ch25h cholesterol 25-hydroxylase involved_in ISO
ISS		 (PMID:32944968), (PMID:33239446)
GO_REF:0000024		 RGD
UniProt		 PMID:32944968 PMID:33239446 GO_REF:0000024 NCBI chr 1:232,014,877...232,016,195
Ensembl chr 1:232,014,880...232,016,195 		JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IEA
ISO		 GO_REF:0000107
(PMID:23544079)		 Ensembl
RGD		 PMID:23544079 GO_REF:0000107 NCBI chr13:85,373,219...85,374,195
Ensembl chr13:85,373,220...85,374,298 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Ciita class II, major histocompatibility complex, transactivator involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr10:5,139,947...5,187,493
Ensembl chr10:5,140,178...5,187,440 		JBrowse link
G Fcnb ficolin B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:11,393,713...11,402,198
Ensembl chr 3:11,393,739...11,402,151 		JBrowse link
G Gsn gelsolin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:5437420|PMID:21253575)
(PMID:25738301)
GO_REF:0000033
(PMID:21253575), (PMID:23358889), (PMID:26354436)		 RGD
GO_Central		 PMID:21253575 PMID:23358889 PMID:25738301 PMID:26354436 GO_REF:0000033 MGI:5437420 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA		 (MGI:5437420|PMID:21253575)
GO_REF:0000033
(PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656)		 RGD
GO_Central		 PMID:21253575 PMID:23358889 PMID:26354436 PMID:33563656 GO_REF:0000033 MGI:5437420 NCBI chr 1:196,051,539...196,052,719
Ensembl chr 1:196,051,537...196,052,741 		JBrowse link
G Ifitm2-ps2 interferon induced transmembrane protein 2, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:68,187,131...68,187,808
Ensembl chr13:68,187,366...68,187,854 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO
IBA
ISS		 (MGI:5437420|PMID:21253575)
GO_REF:0000033
(PMID:20943977), (PMID:21253575), (PMID:23358889), (PMID:26354436)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:20943977 PMID:21253575 PMID:23358889 PMID:26354436 GO_REF:0000024 GO_REF:0000033 MGI:5437420 NCBI chr 1:196,111,026...196,112,135
Ensembl chr 1:196,111,043...196,112,203 		JBrowse link
G Ifitm3-ps1 interferon induced transmembrane protein3, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:61,233,269...61,233,688
Ensembl chr14:61,233,269...61,233,688 		JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,117,043...196,118,315
Ensembl chr 1:196,117,049...196,118,386 		JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in ISO
IEA		 (PMID:36228039), (PMID:36757924)
GO_REF:0000107		 RGD
Ensembl		 PMID:36228039 PMID:36757924 GO_REF:0000107 NCBI chr11:70,469,817...70,484,268
Ensembl chr11:70,469,804...70,484,267 		JBrowse link
G Ly6e lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)		 RGD PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:104,354,692...104,456,757
Ensembl chr  X:104,355,316...104,453,473 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IMP RGD PMID:22850678 RGD:8693392 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin IMP RGD PMID:22850678 RGD:8693392 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323 		JBrowse link
G Rad50 RAD50 double strand break repair protein IMP RGD PMID:22850678 RGD:8693392 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:45,992,446...46,025,361
Ensembl chr20:45,992,720...46,025,379 		JBrowse link
G Trim10 tripartite motif-containing 10 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr20:1,689,554...1,698,948
Ensembl chr20:1,689,562...1,698,252 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:43,758,299...43,771,138
Ensembl chr10:43,758,354...43,771,138 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257 		JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IBA
IEA		 (PMID:18248090)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:18248090 GO_REF:0000033 GO_REF:0000107 NCBI chr20:1,708,297...1,731,176
Ensembl chr20:1,709,788...1,731,120 		JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO
IBA		 (PMID:18248090)
GO_REF:0000033
(MGI:5545996|PMID:18248090)		 RGD
GO_Central		 PMID:18248090 GO_REF:0000033 MGI:5545996 NCBI chr20:1,653,165...1,666,494
Ensembl chr20:1,653,165...1,666,494 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr12:19,544,913...19,567,324
Ensembl chr12:19,551,521...19,567,462 		JBrowse link
G Trim59 tripartite motif-containing 59 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 2:153,269,210...153,281,185
Ensembl chr 2:153,268,584...153,281,031 		JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513 		JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387 		JBrowse link
G Cd4 Cd4 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr 4:157,668,878...157,695,366 JBrowse link
G Cd74 CD74 molecule involved_in ISO
IEA		 (PMID:24942581)
GO_REF:0000107		 RGD
Ensembl		 PMID:24942581 GO_REF:0000107 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314 		JBrowse link
G Lgals1 galectin 1 involved_in ISO
IEA		 (PMID:21670307)
GO_REF:0000107		 RGD
Ensembl		 PMID:21670307 GO_REF:0000107 NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:36,934,306...36,973,779
Ensembl chr11:36,934,306...36,973,715 		JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:45,475,819...45,508,409
Ensembl chr 8:45,476,053...45,508,409 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:43,758,299...43,771,138
Ensembl chr10:43,758,354...43,771,138 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440 		JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:41,351,857...41,365,021 JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO
IEA		 UniProtKB:P51636 (PMID:21047970)
GO_REF:0000107		 RGD
Ensembl		 PMID:21047970 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Cav2 caveolin 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:O60840 (PMID:21047970)		 Ensembl
RGD		 PMID:21047970 GO_REF:0000107 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32855215) RGD PMID:16081529 PMID:32855215 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G KIAA0319l KIAA0319 like acts_upstream_of_or_within ISO MGI:5907241|MGI:5907242 (PMID:26814968) RGD PMID:26814968 NCBI chr 5:139,047,847...139,140,709
Ensembl chr 5:139,046,143...139,140,715 		JBrowse link
G Rnasek ribonuclease K involved_in ISO (PMID:26212330) RGD PMID:26212330 NCBI chr10:54,954,904...54,956,622
Ensembl chr10:54,951,991...54,956,601 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236 		JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,106,876...40,417,661
Ensembl chr20:40,106,876...40,417,653 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:11602758) RGD PMID:11602758 NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360 		JBrowse link
G Rfpl4a ret finger protein-like 4A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,728,964...68,735,423
Ensembl chr 1:68,728,964...68,735,423 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257 		JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,766,401...158,787,915
Ensembl chr 1:158,765,969...158,787,183 		JBrowse link
G Trim30d tripartite motif-containing 30D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,795,288...158,813,913
Ensembl chr 1:158,720,410...158,814,012 		JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,707,172...158,720,214
Ensembl chr 1:158,707,172...158,718,674 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012 		JBrowse link
G Trim58 tripartite motif-containing 58 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:43,022,933...43,038,984
Ensembl chr10:43,022,996...43,034,476 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915 		JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:157,114,044...157,127,494
Ensembl chr 1:157,114,044...157,127,477 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19694
    viral process 337
      viral life cycle 262
        symbiont entry into host cell 111
          endocytosis involved in viral entry into host cell + 10
          entry into host cell by a symbiont-containing vacuole 0
          lysis of host organelle involved in viral entry into host cell + 0
          negative regulation of viral entry into host cell + 29
          positive regulation of viral entry into host cell + 15
          regulation of viral entry into host cell + 52
          symbiont entry into host cell via disruption of host cell envelope 0
          symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide 0
          symbiont entry into host cell via disruption of host cell glycocalyx 0
          symbiont entry into host cell via disruption of host cell wall peptidoglycan 0
          symbiont entry into host cell via permeabilization of host membrane + 0
          symbiont genome ejection through host cell envelope + 0
          symbiont genome entry into host cell via pore formation in plasma membrane 0
          virion attachment to host cell pilus 0
Path 2
Term Annotations click to browse term
  biological_process 19694
    biological process involved in interspecies interaction between organisms 1946
      biological process involved in symbiotic interaction 254
        biological process involved in interaction with host 156
          symbiont entry into host 114
            symbiont entry into host cell 111
              endocytosis involved in viral entry into host cell + 10
              entry into host cell by a symbiont-containing vacuole 0
              lysis of host organelle involved in viral entry into host cell + 0
              negative regulation of viral entry into host cell + 29
              positive regulation of viral entry into host cell + 15
              regulation of viral entry into host cell + 52
              symbiont entry into host cell via disruption of host cell envelope 0
              symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide 0
              symbiont entry into host cell via disruption of host cell glycocalyx 0
              symbiont entry into host cell via disruption of host cell wall peptidoglycan 0
              symbiont entry into host cell via permeabilization of host membrane + 0
              symbiont genome ejection through host cell envelope + 0
              symbiont genome entry into host cell via pore formation in plasma membrane 0
              virion attachment to host cell pilus 0
paths to the root