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Gene: Trim59 (tripartite motif-containing 59) Rattus norvegicus
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Symbol: Trim59
Name: tripartite motif-containing 59
Description: Predicted to have ubiquitin protein ligase activity. Predicted to be involved in innate immune response; negative regulation of I-kappaB kinase/NF-kappaB signaling; and negative regulation of viral entry into host cell. Predicted to localize to the endoplasmic reticulum. Orthologous to human TRIM59 (tripartite motif containing 59); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-benzylpiperazine; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC365813; RGD1311956; similar to RIKEN cDNA 2310035M22; tripartite motif-containing protein 59
Orthologs:
Homo sapiens (human) : TRIM59 (tripartite motif containing 59)  HGNC  Alliance
Mus musculus (house mouse) : Trim59 (tripartite motif-containing 59)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim59 (tripartite motif containing 59)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM59 (tripartite motif containing 59)
Canis lupus familiaris (dog) : TRIM59 (tripartite motif containing 59)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim59 (tripartite motif containing 59)
Sus scrofa (pig) : TRIM59 (tripartite motif containing 59)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02165,629,903 - 165,641,751 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02184,991,013 - 185,003,008 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42159,016,206 - 159,027,069 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12158,967,598 - 158,977,960 (-)NCBI
Celera2147,619,995 - 147,630,795 (-)NCBICelera
Cytogenetic Map2q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim59
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311956
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.