Gene: Trim11 (tripartite motif-containing 11) Rattus norvegicus
Analyze
Symbol: Trim11
Name: tripartite motif-containing 11
Description: ENCODES a protein that exhibits protein domain specific binding (ortholog); transcription factor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of neurogenesis (ortholog); negative regulation of transcription, DNA-templated (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; C60 fullerene
AGR Description: Predicted to have protein domain specific binding activity, transcription factor binding activity, and ubiquitin protein ligase activity; predicted to be involved in several processes, including innate immune response, negative regulation of neurogenesis, and regulation of viral process; predicted to localize to the cytosol and nucleus; orthologous to human TRIM11 (tripartite motif containing 11).
Merged Description: Predicted to have protein domain specific binding activity, transcription factor binding activity, and ubiquitin protein ligase activity; predicted to be involved in several processes, including innate immune response, negative regulation of neurogenesis, and regulation of viral process; predicted to localize to the cytosol and nucleus; orthologous to human TRIM11 (tripartite motif containing 11); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase TRIM11; LOC360534; RING-type E3 ubiquitin transferase TRIM11; tripartite motif protein 11; tripartite motif-containing protein 11
Orthologs:
Homo sapiens (human) : TRIM11 (tripartite motif containing 11)  HGNC  Alliance
Mus musculus (house mouse) : Trim11 (tripartite motif-containing 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim11 (tripartite motif containing 11)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM11 (tripartite motif containing 11)
Canis lupus familiaris (dog) : TRIM11 (tripartite motif containing 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim11 (tripartite motif containing 11)
Sus scrofa (pig) : TRIM11 (tripartite motif containing 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01045,322,199 - 45,335,030 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01045,078,796 - 45,091,446 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,270,583 - 45,283,954 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11045,284,255 - 45,294,925 (+)NCBI
Celera1043,024,655 - 43,037,489 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trim11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305448
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.