Ilf3 (interleukin enhancer binding factor 3)

Advanced Search (OLGA)

Gene: Ilf3 (interleukin enhancer binding factor 3) Rattus norvegicus

Analyze

Symbol:

Ilf3

Name:

interleukin enhancer binding factor 3

RGD ID:

619734

Description:

Enables enzyme binding activity. Acts upstream of or within protein methylation. Predicted to be located in mitochondrion; nucleolus; and nucleoplasm. Predicted to be part of ribonucleoprotein complex. Orthologous to human ILF3 (interleukin enhancer binding factor 3); INTERACTS WITH 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine; 17alpha-ethynylestradiol; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

interleukin enhancer-binding factor 3; M phase phosphoprotein 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	28,198,454 - 28,236,634 (+)	NCBI		GRCr8
mRatBN7.2	8	19,922,409 - 19,960,495 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	19,922,460 - 19,960,350 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	23,964,289 - 23,991,881 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	22,262,127 - 22,289,719 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	20,162,536 - 20,189,833 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	22,402,877 - 22,440,984 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	22,402,890 - 22,440,885 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	22,467,473 - 22,494,771 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	20,481,746 - 20,508,850 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	20,481,745 - 20,508,850 (+)	NCBI
Celera	8	21,324,176 - 21,351,393 (+)	NCBI		Celera
Cytogenetic Map	8	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial hypercholesterolemia (ISO)

immunodeficiency 35 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine (EXP)

1-chloro-2,4-dinitrobenzene (ISO)

17alpha-ethynylestradiol (EXP,ISO)

17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-amino-2,6-dinitrotoluene (EXP)

6-propyl-2-thiouracil (EXP)

aconitine (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

calcium atom (ISO)

calcium(0) (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

choline (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

CU-O LINKAGE (ISO)

cyclophosphamide (ISO)

dexamethasone (ISO)

diazinon (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

enzyme inhibitor (ISO)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

genistein (ISO)

gentamycin (EXP)

indometacin (ISO)

ivermectin (ISO)

L-methionine (ISO)

lead(0) (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-methyl-4-phenylpyridinium (ISO)

nickel atom (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

piroxicam (ISO)

resveratrol (ISO)

SB 431542 (ISO)

selenium atom (ISO)

sodium arsenate (ISO)

sodium arsenite (EXP,ISO)

sulindac sulfide (ISO)

sunitinib (ISO)

tamibarotene (ISO)

tanespimycin (ISO)

tert-butyl hydroperoxide (ISO)

thapsigargin (EXP)

thimerosal (ISO)

thiram (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

Tributyltin oxide (EXP)

trichostatin A (ISO)

trimellitic anhydride (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

troglitazone (ISO)

tungsten (ISO)

valproic acid (ISO)

vitamin E (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

defense response to virus (IEA)

negative regulation of DNA-templated transcription (IEA,ISO)

negative regulation of translation (IEA,ISO,ISS)

negative regulation of viral genome replication (IEA,ISO,ISS)

positive regulation of DNA-templated transcription (IEA,ISO)

protein methylation (IDA)

protein phosphorylation (IEA,ISO,ISS)

spliceosome-depend formation of circular RNA (IEA,ISO,ISS)

symbiont entry into host cell (IEA)

Cellular Component

cytoplasm (IEA,ISO,ISS)

mitochondrion (IEA,ISO)

nucleolus (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO,ISS)

ribonucleoprotein complex (IEA,ISO,ISS)

Molecular Function

DNA binding (IEA,ISO)

DNA-binding transcription factor activity (TAS)

double-stranded RNA binding (IBA,IEA,ISO)

enzyme binding (IPI)

mRNA 3'-UTR AU-rich region binding (IEA,ISO,ISS)

protein binding (IPI,ISO)

single-stranded RNA binding (IBA)

virus receptor activity (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Protein-arginine methyltransferase I, the predominant protein-arginine methyltransferase in cells, interacts with and is regulated by interleukin enhancer-binding factor 3.	Tang J, etal., J Biol Chem 2000 Jun 30;275(26):19866-76.

Additional References at PubMed

PMID:7519613	PMID:8885239	PMID:10574923	PMID:11739746	PMID:11777942	PMID:14731398	PMID:15057822	PMID:17289661	PMID:19946888	PMID:21123651	PMID:22658674	PMID:22681889
PMID:22871113	PMID:24625528	PMID:27068509	PMID:31536826	PMID:32196615	PMID:33450132	PMID:36222883

Genomics

Comparative Map Data

Ilf3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	28,198,454 - 28,236,634 (+)	NCBI		GRCr8
mRatBN7.2	8	19,922,409 - 19,960,495 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	19,922,460 - 19,960,350 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	23,964,289 - 23,991,881 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	22,262,127 - 22,289,719 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	20,162,536 - 20,189,833 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	22,402,877 - 22,440,984 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	22,402,890 - 22,440,885 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	22,467,473 - 22,494,771 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	20,481,746 - 20,508,850 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	20,481,745 - 20,508,850 (+)	NCBI
Celera	8	21,324,176 - 21,351,393 (+)	NCBI		Celera
Cytogenetic Map	8	q13	NCBI

ILF3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	10,654,346 - 10,692,400 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	10,654,304 - 10,692,400 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	10,765,022 - 10,803,076 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	10,625,988 - 10,664,095 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	10,625,987 - 10,657,443	NCBI
Celera	19	10,659,687 - 10,697,851 (+)	NCBI		Celera
Cytogenetic Map	19	p13.2	NCBI
HuRef	19	10,342,365 - 10,380,213 (+)	NCBI		HuRef
CHM1_1	19	10,766,190 - 10,804,342 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	10,780,831 - 10,818,864 (+)	NCBI		T2T-CHM13v2.0

Ilf3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	21,278,964 - 21,316,659 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	21,279,167 - 21,316,657 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	21,367,731 - 21,405,363 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	21,367,871 - 21,405,361 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	21,172,447 - 21,209,805 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	21,118,985 - 21,155,723 (+)	NCBI		MGSCv36	mm8
Celera	9	18,636,679 - 18,674,037 (+)	NCBI		Celera
Cytogenetic Map	9	A3	NCBI
cM Map	9	7.78	NCBI

Ilf3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	1,827,860 - 1,844,369 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955495	1,814,012 - 1,844,605 (+)	NCBI	ChiLan1.0	ChiLan1.0

ILF3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	15,572,450 - 15,611,357 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	14,571,774 - 14,607,397 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	10,206,636 - 10,244,779 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	10,867,143 - 10,905,965 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	10,867,143 - 10,905,953 (+)	Ensembl	panpan1.1		panPan2

ILF3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	50,511,915 - 50,544,234 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	50,515,334 - 50,544,184 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	50,384,533 - 50,416,978 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	51,034,719 - 51,067,176 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	51,037,994 - 51,067,139 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	50,242,969 - 50,275,171 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	50,670,295 - 50,702,494 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	50,911,363 - 50,943,802 (-)	NCBI		UU_Cfam_GSD_1.0

Ilf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	209,414,682 - 209,451,022 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936659	918,074 - 940,121 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936659	903,690 - 940,024 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ILF3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	69,413,982 - 69,443,214 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	69,413,875 - 69,443,216 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	69,799,231 - 69,826,499 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ILF3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	9,654,632 - 9,692,202 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	9,672,453 - 9,686,793 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	10,277,704 - 10,318,529 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ilf3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624828	2,683,868 - 2,715,702 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ilf3
150 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	248
Count of miRNA genes:	168
Interacting mature miRNAs:	190
Transcripts:	ENSRNOT00000009354
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1558646	Swd5	Spike wave discharge measurement QTL 5	3.45	0.00036	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge frequency (CMO:0001742)	8	14906751	59906751	Rat
1357398	Slep3	Serum leptin concentration QTL 3	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	9712463	41866876	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	8736635	53736635	Rat
731182	Uae24	Urinary albumin excretion QTL 24	6.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	19331152	93965294	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	2097640	47097640	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	4705810	49705810	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	7670578	52670578	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	10378157	112202585	Rat
1581557	Eae16	Experimental allergic encephalomyelitis QTL 16	3.8		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	8	8462195	110921472	Rat
631271	Lecl1	Lens clarity QTL 1		0.001	lens clarity trait (VT:0001304)	age of onset/diagnosis of cataract (CMO:0001584)	8	18984168	84531599	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	4705810	49705810	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	9712220	53356647	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	2097640	47097640	Rat
9590084	Insglur5	Insulin/glucose ratio QTL 5	18.54	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	8	1	24597739	Rat
1354595	Despr4	Despair related QTL 4	2.16	0.0036	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	8	7688955	52688955	Rat
1354627	Despr14	Despair related QTL 14		0.0056	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	8	7688955	52688955	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	2097640	47097640	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	8736635	53736635	Rat
2317882	Alcrsp24	Alcohol response QTL 24	3.2	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	8	1	25902202	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	4705810	49705810	Rat
2302367	Slep5	Serum leptin concentration QTL 5	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	9712463	41866876	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	2097640	47097640	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	16290444	61290444	Rat

Markers in Region

MARC_21355-21356:1023203034:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	19,950,500 - 19,951,206 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	22,430,994 - 22,431,699	NCBI	Rnor6.0
Rnor_5.0	8	22,485,107 - 22,485,812	UniSTS	Rnor5.0
RGSC_v3.4	8	20,499,184 - 20,499,889	UniSTS	RGSC3.4
RGSC_v3.4	X	28,479,654 - 28,479,807	UniSTS	RGSC3.4
Celera	8	21,341,734 - 21,342,439	UniSTS
Cytogenetic Map	8	q13	UniSTS

UniSTS:479168

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	19,958,406 - 19,960,038 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	22,438,900 - 22,440,529	NCBI	Rnor6.0
Rnor_5.0	8	22,493,012 - 22,494,641	UniSTS	Rnor5.0
RGSC_v3.4	8	20,507,091 - 20,508,720	UniSTS	RGSC3.4
Celera	8	21,349,640 - 21,351,263	UniSTS
Cytogenetic Map	8	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC130555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF220102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009354 ⟹ ENSRNOP00000009354

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	19,943,016 - 19,956,910 (+)	Ensembl
Rnor_6.0 Ensembl	8	22,423,890 - 22,440,410 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079230 ⟹ ENSRNOP00000072369

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	19,922,460 - 19,960,350 (+)	Ensembl
Rnor_6.0 Ensembl	8	22,402,890 - 22,440,885 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085320 ⟹ ENSRNOP00000073179

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	19,943,786 - 19,960,350 (+)	Ensembl
Rnor_6.0 Ensembl	8	22,423,467 - 22,440,659 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101953 ⟹ ENSRNOP00000086301

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	19,922,482 - 19,956,910 (+)	Ensembl

RefSeq Acc Id:

NM_053412 ⟹ NP_445864

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,209,010 - 28,236,309 (+)	NCBI
mRatBN7.2	8	19,932,867 - 19,960,168 (+)	NCBI
Rnor_6.0	8	22,413,319 - 22,440,659 (+)	NCBI
Rnor_5.0	8	22,467,473 - 22,494,771 (+)	NCBI
RGSC_v3.4	8	20,481,746 - 20,508,850 (+)	RGD
Celera	8	21,324,176 - 21,351,393 (+)	RGD

Sequence:

show sequence

GAAGAGGGTGTCGGCCTTCTTGGGACAGATGATTGTAAGCTGCATGTGGGTGCCAGGAACTGAA
CCCTGGTTCCTCTGCAAGAGCAGTAAATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAA
TTTGAAAAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGGCAT
TGTATCATCATCACTTCATCACAAGAAGAAGAAGGCGTCCCATGAGAATTTTTGTGAATGATGA
TCGCCATGTGATGGCAAAGCATTCTTCAGTATACCCAACACAAGAGGAGCTGGAGGCTGTACAG
AACATGGTGTCCCACACTGAGCGGGCCCTCAAGGCTGTCTCTGACTGGATTGATGAGCAGGAGA
AAGGCAACAGCGAGCTCTCTGAAGCAGAAAATATGGACACACCCCCAGATGATGAGAGCAAAGA
AGGGGCTGGGGAACAGAAGGCGGAACACATGACTAGGACCCTGAGGGGCGTGATGCGGGTCGGC
CTGGTAGCCAAGGGTCTTCTGCTCAAGGGGGACTTGGATCTGGAGCTGGTTCTGCTCTGTAAGG
AGAAGCCCACAACTGCCCTTCTGGACAAGGTGGCTGACAACCTGGCCATCCAGCTTACTACTGT
AACAGAAGACAAGTATGAAATACTCCAATCTGTGGATGATGCTGCGATTGTGATAAAAAACACA
AAAGAGCCCCCCTTGTCCTTGACCATCCATCTGACCTCCCCTGTTGTCAGAGAAGAAATGGAGA
AAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTCTGGACAGGCAGAAATG
CCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCTAGAGCCAATGGGCTGAAG
TCATGTGTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGAGTGCCCACCTGGGGTCCTC
TCAGAGGATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCACTGCCAATAGGCCAATGGG
TGCTGGTGAAGCCCTGCGGAGAGTACTGGAGTGCCTGGCTTCCGGCATCGTAATGCCAGATGGT
TCTGGCATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGC
AACGGGAAGATATCACACAGAGTGCGCAGCATGCTCTGCGGCTTGCTGCCTTTGGCCAGCTCCA
TAAAGTACTGGGAATGGACCCACTGCCTTCCAAAATGCCCAAGAAACCAAAGAACGAGAACCCG
GTGGACTATACTGTTCAAATCCCCCCCAGCACCACCTACGCCATCACACCCATGAAACGCCCTA
TGGAAGAAGATGGGGAGGAGAAGTCTCCCAGCAAAAAGAAAAAGAAGATCCAGAAGAAAGAGGA
GAAGGCTGAGCCTCCCCAAGCTATGAATGCCCTGATGAGGTTAAACCAGCTGAAGCCAGGGCTA
CAGTACAAGCTGATCTCCCAGACGGGTCCTGTTCACGCTCCCATCTTCACCATGTCTGTGGAGG
TAGACGGCAGTACCTTTGAGGCCTCAGGGCCATCTAAAAAGACCGCCAAGCTACATGTGGCTGT
GAAGGTGTTACAGGACATGGGATTGCCAACAGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAG
GACTCTGCTGAGGAGTCAGATGGGAAGCCAGCAGTAGTGGCCCCACCCCCTGTGGTGGAAGCAG
TCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTGAGCAGGGGCCGATTTTGACTAA
GCACGGCAAGAATCCTGTAATGGAGCTTAATGAGAAGAGACGTGGCCTCAAATATGAGCTCATT
TCTGAGACAGGGGGCAGCCACGACAAACGGTTTGTTATGGAGGTTGAGGTGGACGGACAGAAGT
TTCAAGGTGCTGGCTCAAACAAAAAGGTAGCAAAGGCTTATGCTGCACTTGCCGCATTAGAGAA
GCTTTTCCCTGACGCCCCTCTTGCTCTTGAAGCCAACAAGAAGAAAAGAGCCCCTGTGCCTGTC
CGAGGCGGACCCAAATTTGCTGCCAAGCCACATAACCCTGGCTTTGGCATGGGAGGCCCCATGC
ATAATGAAGCGCCCCCACCTCCCAACATCCGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCG
AGGACGGGGGCGAGGATTTGGTGGCACCAACCACGGAGGAGGCTACATGAATGCTGGCGCTGGA
TATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTACAGTCAGTTCTACAGCAATG
GAGGGCATTATGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGTGGTGGCTCGTCCAGCTACAG
CTCCTACTACCAAGGAGACAGCTACAACTCACCAGTGCCCCCGAAACATGCTGGGAAGAAGCCG
CTGCATGGGGGCCAGCAGAAACCCTCCTACAGCTCGGGCTACCAGTCCCACCAGGGCCAGCAGC
AACCTTACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGGGCAAGCAGAAAGGCTATGG
CCATGGGCAGGGCAGCTACTCCTCCTACTCCAACTCTTACAACTCCCCTGGTGGTGGTGGGGGC
TCTGACTACAGCTACGACAGCAAATTCAACTACAGTGGTAGTGGAGGCCGGAGTGGAGGGAACA
GCTATGGCTCCAGCGGGTCATCCTACAACACAGGCTCACATGGGGGTTATGGCGCAGGTTCTGG
AGGCAGCTCTTCATACCAAGGCAAACAAGGAGGCTACTCATCACAGTCAAACTACAGCTCCCCT
GGGTCCAGCCAGAGCTACAGCGGCCCCGCCAGCTCCTACCAGTCCTCACAGGGTGGCTACAGTC
GGAACACAGAACACAGCATGAACTACCAGTACAGATAAAGGCCCAGGCTGCCCCTCTCAACCTT
CTGCACCTCTGCCTCCAACTTGTCTCGGGAGATTGAGTCTGCACATCACCAGTTGCCATGTCCA
CTGGGCCAGTGCCCACCCGTCCACGTTGCTGACGTTGCCACGCTGTGAGGCGTGGTGGTCCCTG
GGACCCGTGCCGTTGACCCTATTTAGCTGTGTTTTGGACTCAGTGTCTTCAGTGGTTTGTTAGT
TACCATTACACCTTGTCTGAGTAGTGTTCCGA

hide sequence

RefSeq Acc Id:

XM_008765990 ⟹ XP_008764212

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,526 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,412 - 19,960,495 (+)	NCBI
Rnor_6.0	8	22,402,877 - 22,440,984 (+)	NCBI

Sequence:

show sequence

CGGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCC
TCCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTT
TTTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGG
ACGAAGGACGGGAACGCCAAGATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAATTTGA
AAAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGGCATTGTAT
CATCATCACTTCATCACAAGAAGAAGAAGGTTTTCACATTTCCAGCGTCCCATGAGAATTTTTG
TGAATGATGATCGCCATGTGATGGCAAAGCATTCTTCAGTATACCCAACACAAGAGGAGCTGGA
GGCTGTACAGAACATGGTGTCCCACACTGAGCGGGCCCTCAAGGCTGTCTCTGACTGGATTGAT
GAGCAGGAGAAAGGCAACAGCGAGCTCTCTGAAGCAGAAAATATGGACACACCCCCAGATGATG
AGAGCAAAGAAGGGGCTGGGGAACAGAAGGCGGAACACATGACTAGGACCCTGAGGGGCGTGAT
GCGGGTCGGCCTGGTAGCCAAGGGTCTTCTGCTCAAGGGGGACTTGGATCTGGAGCTGGTTCTG
CTCTGTAAGGAGAAGCCCACAACTGCCCTTCTGGACAAGGTGGCTGACAACCTGGCCATCCAGC
TTACTACTGTAACAGAAGACAAGTATGAAATACTCCAATCTGTGGATGATGCTGCGATTGTGAT
AAAAAACACAAAAGAGCCCCCCTTGTCCTTGACCATCCATCTGACCTCCCCTGTTGTCAGAGAA
GAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTCTGGACA
GGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCTAGAGCCAA
TGGGCTGAAGTCATGTGTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGAGTGCCCACC
TGGGGTCCTCTCAGAGGATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCACTGCCAATA
GGCCAATGGGTGCTGGTGAAGCCCTGCGGAGAGTACTGGAGTGCCTGGCTTCCGGCATCGTAAT
GCCAGATGGTTCTGGCATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATTGGGCATCTA
GACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCATGCTCTGCGGCTTGCTGCCTTTG
GCCAGCTCCATAAAGTACTGGGAATGGACCCACTGCCTTCCAAAATGCCCAAGAAACCAAAGAA
CGAGAACCCGGTGGACTATACTGTTCAAATCCCCCCCAGCACCACCTACGCCATCACACCCATG
AAACGCCCTATGGAAGAAGATGGGGAGGAGAAGTCTCCCAGCAAAAAGAAAAAGAAGATCCAGA
AGAAAGAGGAGAAGGCTGAGCCTCCCCAAGCTATGAATGCCCTGATGAGGTTAAACCAGCTGAA
GCCAGGGCTACAGTACAAGCTGATCTCCCAGACGGGTCCTGTTCACGCTCCCATCTTCACCATG
TCTGTGGAGGTAGACGGCAGTACCTTTGAGGCCTCAGGGCCATCTAAAAAGACCGCCAAGCTAC
ATGTGGCTGTGAAGGTGTTACAGGACATGGGATTGCCAACAGGCGCTGAAGGCAGAGACTCCAG
CAAGGGGGAGGACTCTGCTGAGGAGTCAGATGGGAAGCCAGCAGTAGTGGCCCCACCCCCTGTG
GTGGAAGCAGTCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTGAGCAGGGGCCGA
TTTTGACTAAGCACGGCAAGAATCCTGTAATGGAGCTTAATGAGAAGAGACGTGGCCTCAAATA
TGAGCTCATTTCTGAGACAGGGGGCAGCCACGACAAACGGTTTGTTATGGAGGTTGAGGTGGAC
GGACAGAAGTTTCAAGGTGCTGGCTCAAACAAAAAGGTAGCAAAGGCTTATGCTGCACTTGCCG
CATTAGAGAAGCTTTTCCCTGACGCCCCTCTTGCTCTTGAAGCCAACAAGAAGAAAAGAGCCCC
TGTGCCTGTCCGAGGCGGACCCAAATTTGCTGCCAAGCCACATAACCCTGGCTTTGGCATGGGA
GGCCCCATGCATAATGAAGCGCCCCCACCTCCCAACATCCGAGGTCGGGGCCGAGGAGGTAACA
TCCGAGGGCGAGGACGGGGGCGAGGATTTGGTGGCACCAACCACGGAGGAGGCTACATGAATGC
TGGCGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTACAGTCAGTTC
TACAGCAATGGAGGGCATTCTGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGTGGTGGCTCGT
CCAGCTACAGCTCCTACTACCAAGGAGACAGCTACAACTCACCAGTGCCCCCGAAACATGCTGG
GAAGAAGCCGCTGCATGGGGGCCAGCAGAAACCCTCCTACAGCTCGGGCTACCAGTCCCACCAG
GGCCAGCAGCAACCTTACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGGGCAAGCAGA
AAGGCTATGGCCATGGGCAGGGCAGCTACTCCTCCTACTCCAACTCTTACAACTCCCCTGGTGG
TGGTGGGGGCTCTGACTACAGCTACGACAGCAAATTCAACTACAGTGGTAGTGGAGGCCGGAGT
GGAGGGAACAGCTATGGCTCCAGCGGGTCATCCTACAACACAGGCTCACATGGGGGTTATGGCG
CAGGTTCTGGAGGCAGCTCTTCATACCAAGGCAAACAAGGAGGCTACTCATCACAGTCAAACTA
CAGCTCCCCTGGGTCCAGCCAGAGCTACAGCGGCCCCGCCAGCTCCTACCAGTCCTCACAGGGT
GGCTACAGTCGGAACACAGAACACAGCATGAACTACCAGTACAGATAAAGGCCCAGGCTGCCCC
TCTCAACCTTCTGCACCTCTGCCTCCAACTTGTCTCGGGAGATTGAGTCTGCACATCACCAGTT
GCCATGTCCACTGGGCCAGTGCCCACCCGTCCACGTTGCTGACGTTGCCACGCTGTGAGGCGTG
GTGGTCCCTGGGACCCGTGCTGTGACCCTATTTAGCTGTGTTTTGGACTCAGTGTCTTCAGTGG
TTTGTTAGTTACCATTACACCTTGTCTGAGTAGTGTTCCGAGTTCTTGCCGTGCGGAATCCCTC
TGTCTGTTTATGCCCGGTGTGAGTTCCATCGGGTGTCTTTAAATAGTTGCAGAAGGGATACGTC
ATCTGTTAATGCTTTTTGTGAAGTGAGTTAAATGAGCTTTCATTATTTTAATGCTTAGTGTTTC
AGTTTTATAAGTGAAAATTTTATTTTAAAAAACAGTGGGGTTTGTTTTTTTGTTTTTTTGTCTT
TGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATGTCTGGATCATTCAGGCAGTAC
ATTTGAATTCCGCTGAATGTAGATAAATAAAAGAAAAACAAAACAG

hide sequence

RefSeq Acc Id:

XM_008765991 ⟹ XP_008764213

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,526 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,410 - 19,960,495 (+)	NCBI
Rnor_6.0	8	22,402,877 - 22,440,984 (+)	NCBI

Sequence:

show sequence

CGGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCC
TCCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTT
TTTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGG
ACGAAGGACGGGAACGCCAAGATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAATTTGA
AAAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGGCATTGTAT
CATCATCACTTCATCACAAGAAGAAGAAGGTTTTCACATTTCCAGCGTCCCATGAGAATTTTTG
TGAATGATGATCGCCATGTGATGGCAAAGCATTCTTCAGTATACCCAACACAAGAGGAGCTGGA
GGCTGTACAGAACATGGTGTCCCACACTGAGCGGGCCCTCAAGGCTGTCTCTGACTGGATTGAT
GAGCAGGAGAAAGGCAACAGCGAGCTCTCTGAAGCAGAAAATATGGACACACCCCCAGATGATG
AGAGCAAAGAAGGGGCTGGGGAACAGAAGGCGGAACACATGACTAGGACCCTGAGGGGCGTGAT
GCGGGTCGGCCTGGTAGCCAAGGGTCTTCTGCTCAAGGGGGACTTGGATCTGGAGCTGGTTCTG
CTCTGTAAGGAGAAGCCCACAACTGCCCTTCTGGACAAGGTGGCTGACAACCTGGCCATCCAGC
TTACTACTGTAACAGAAGACAAGTATGAAATACTCCAATCTGTGGATGATGCTGCGATTGTGAT
AAAAAACACAAAAGAGCCCCCCTTGTCCTTGACCATCCATCTGACCTCCCCTGTTGTCAGAGAA
GAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTCTGGACA
GGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCTAGAGCCAA
TGGGCTGAAGTCATGTGTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGAGTGCCCACC
TGGGGTCCTCTCAGAGGATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCACTGCCAATA
GGCCAATGGGTGCTGGTGAAGCCCTGCGGAGAGTACTGGAGTGCCTGGCTTCCGGCATCGTAAT
GCCAGATGGTTCTGGCATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATTGGGCATCTA
GACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCATGCTCTGCGGCTTGCTGCCTTTG
GCCAGCTCCATAAAGTACTGGGAATGGACCCACTGCCTTCCAAAATGCCCAAGAAACCAAAGAA
CGAGAACCCGGTGGACTATACTGTTCAAATCCCCCCCAGCACCACCTACGCCATCACACCCATG
AAACGCCCTATGGAAGAAGATGGGGAGGAGAAGTCTCCCAGCAAAAAGAAAAAGAAGATCCAGA
AGAAAGAGGAGAAGGCTGAGCCTCCCCAAGCTATGAATGCCCTGATGAGGTTAAACCAGCTGAA
GCCAGGGCTACAGTACAAGCTGATCTCCCAGACGGGTCCTGTTCACGCTCCCATCTTCACCATG
TCTGTGGAGGTAGACGGCAGTACCTTTGAGGCCTCAGGGCCATCTAAAAAGACCGCCAAGCTAC
ATGTGGCTGTGAAGGTGTTACAGGACATGGGATTGCCAACAGGCGCTGAAGGCAGAGACTCCAG
CAAGGGGGAGGACTCTGCTGAGGAGTCAGATGGGAAGCCAGCAGTAGTGGCCCCACCCCCTGTG
GTGGAAGCAGTCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTGAGGGGCCGATTT
TGACTAAGCACGGCAAGAATCCTGTAATGGAGCTTAATGAGAAGAGACGTGGCCTCAAATATGA
GCTCATTTCTGAGACAGGGGGCAGCCACGACAAACGGTTTGTTATGGAGGTTGAGGTGGACGGA
CAGAAGTTTCAAGGTGCTGGCTCAAACAAAAAGGTAGCAAAGGCTTATGCTGCACTTGCCGCAT
TAGAGAAGCTTTTCCCTGACGCCCCTCTTGCTCTTGAAGCCAACAAGAAGAAAAGAGCCCCTGT
GCCTGTCCGAGGCGGACCCAAATTTGCTGCCAAGCCACATAACCCTGGCTTTGGCATGGGAGGC
CCCATGCATAATGAAGCGCCCCCACCTCCCAACATCCGAGGTCGGGGCCGAGGAGGTAACATCC
GAGGGCGAGGACGGGGGCGAGGATTTGGTGGCACCAACCACGGAGGAGGCTACATGAATGCTGG
CGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTACAGTCAGTTCTAC
AGCAATGGAGGGCATTCTGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGTGGTGGCTCGTCCA
GCTACAGCTCCTACTACCAAGGAGACAGCTACAACTCACCAGTGCCCCCGAAACATGCTGGGAA
GAAGCCGCTGCATGGGGGCCAGCAGAAACCCTCCTACAGCTCGGGCTACCAGTCCCACCAGGGC
CAGCAGCAACCTTACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGGGCAAGCAGAAAG
GCTATGGCCATGGGCAGGGCAGCTACTCCTCCTACTCCAACTCTTACAACTCCCCTGGTGGTGG
TGGGGGCTCTGACTACAGCTACGACAGCAAATTCAACTACAGTGGTAGTGGAGGCCGGAGTGGA
GGGAACAGCTATGGCTCCAGCGGGTCATCCTACAACACAGGCTCACATGGGGGTTATGGCGCAG
GTTCTGGAGGCAGCTCTTCATACCAAGGCAAACAAGGAGGCTACTCATCACAGTCAAACTACAG
CTCCCCTGGGTCCAGCCAGAGCTACAGCGGCCCCGCCAGCTCCTACCAGTCCTCACAGGGTGGC
TACAGTCGGAACACAGAACACAGCATGAACTACCAGTACAGATAAAGGCCCAGGCTGCCCCTCT
CAACCTTCTGCACCTCTGCCTCCAACTTGTCTCGGGAGATTGAGTCTGCACATCACCAGTTGCC
ATGTCCACTGGGCCAGTGCCCACCCGTCCACGTTGCTGACGTTGCCACGCTGTGAGGCGTGGTG
GTCCCTGGGACCCGTGCTGTGACCCTATTTAGCTGTGTTTTGGACTCAGTGTCTTCAGTGGTTT
GTTAGTTACCATTACACCTTGTCTGAGTAGTGTTCCGAGTTCTTGCCGTGCGGAATCCCTCTGT
CTGTTTATGCCCGGTGTGAGTTCCATCGGGTGTCTTTAAATAGTTGCAGAAGGGATACGTCATC
TGTTAATGCTTTTTGTGAAGTGAGTTAAATGAGCTTTCATTATTTTAATGCTTAGTGTTTCAGT
TTTATAAGTGAAAATTTTATTTTAAAAAACAGTGGGGTTTGTTTTTTTGTTTTTTTGTCTTTGT
TTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATGTCTGGATCATTCAGGCAGTACATT
TGAATTCCGCTGAATGTAGATAAATAAAAGAAAAACAAAACAG

hide sequence

RefSeq Acc Id:

XM_008765992 ⟹ XP_008764214

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,542 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,492 - 19,960,126 (+)	NCBI
Rnor_6.0	8	22,402,877 - 22,440,984 (+)	NCBI

Sequence:

show sequence

CGGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCC
TCCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTT
TTTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGG
ACGAAGGACGGGAACGCCAAGATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAATTTGA
AAAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGGCATTGTAT
CATCATCACTTCATCACAAGAAGAAGAAGGCGTCCCATGAGAATTTTTGTGAATGATGATCGCC
ATGTGATGGCAAAGCATTCTTCAGTATACCCAACACAAGAGGAGCTGGAGGCTGTACAGAACAT
GGTGTCCCACACTGAGCGGGCCCTCAAGGCTGTCTCTGACTGGATTGATGAGCAGGAGAAAGGC
AACAGCGAGCTCTCTGAAGCAGAAAATATGGACACACCCCCAGATGATGAGAGCAAAGAAGGGG
CTGGGGAACAGAAGGCGGAACACATGACTAGGACCCTGAGGGGCGTGATGCGGGTCGGCCTGGT
AGCCAAGGGTCTTCTGCTCAAGGGGGACTTGGATCTGGAGCTGGTTCTGCTCTGTAAGGAGAAG
CCCACAACTGCCCTTCTGGACAAGGTGGCTGACAACCTGGCCATCCAGCTTACTACTGTAACAG
AAGACAAGTATGAAATACTCCAATCTGTGGATGATGCTGCGATTGTGATAAAAAACACAAAAGA
GCCCCCCTTGTCCTTGACCATCCATCTGACCTCCCCTGTTGTCAGAGAAGAAATGGAGAAAGTA
TTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTCTGGACAGGCAGAAATGCCTTG
CTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCTAGAGCCAATGGGCTGAAGTCATG
TGTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGAGTGCCCACCTGGGGTCCTCTCAGA
GGATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCACTGCCAATAGGCCAATGGGTGCTG
GTGAAGCCCTGCGGAGAGTACTGGAGTGCCTGGCTTCCGGCATCGTAATGCCAGATGGTTCTGG
CATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGG
GAAGATATCACACAGAGTGCGCAGCATGCTCTGCGGCTTGCTGCCTTTGGCCAGCTCCATAAAG
TACTGGGAATGGACCCACTGCCTTCCAAAATGCCCAAGAAACCAAAGAACGAGAACCCGGTGGA
CTATACTGTTCAAATCCCCCCCAGCACCACCTACGCCATCACACCCATGAAACGCCCTATGGAA
GAAGATGGGGAGGAGAAGTCTCCCAGCAAAAAGAAAAAGAAGATCCAGAAGAAAGAGGAGAAGG
CTGAGCCTCCCCAAGCTATGAATGCCCTGATGAGGTTAAACCAGCTGAAGCCAGGGCTACAGTA
CAAGCTGATCTCCCAGACGGGTCCTGTTCACGCTCCCATCTTCACCATGTCTGTGGAGGTAGAC
GGCAGTACCTTTGAGGCCTCAGGGCCATCTAAAAAGACCGCCAAGCTACATGTGGCTGTGAAGG
TGTTACAGGACATGGGATTGCCAACAGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAGGACTC
TGCTGAGGAGTCAGATGGGAAGCCAGCAGTAGTGGCCCCACCCCCTGTGGTGGAAGCAGTCTCC
AACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTGAGCAGGGGCCGATTTTGACTAAGCACG
GCAAGAATCCTGTAATGGAGCTTAATGAGAAGAGACGTGGCCTCAAATATGAGCTCATTTCTGA
GACAGGGGGCAGCCACGACAAACGGTTTGTTATGGAGGTTGAGGTGGACGGACAGAAGTTTCAA
GGTGCTGGCTCAAACAAAAAGGTAGCAAAGGCTTATGCTGCACTTGCCGCATTAGAGAAGCTTT
TCCCTGACGCCCCTCTTGCTCTTGAAGCCAACAAGAAGAAAAGAGCCCCTGTGCCTGTCCGAGG
CGGACCCAAATTTGCTGCCAAGCCACATAACCCTGGCTTTGGCATGGGAGGCCCCATGCATAAT
GAAGCGCCCCCACCTCCCAACATCCGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCGAGGAC
GGGGGCGAGGATTTGGTGGCACCAACCACGGAGGAGGCTACATGAATGCTGGCGCTGGATATGG
AAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTACAGTCAGTTCTACAGCAATGGAGGG
CATTCTGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGTGGTGGCTCGTCCAGCTACAGCTCCT
ACTACCAAGGAGACAGCTACAACTCACCAGTGCCCCCGAAACATGCTGGGAAGAAGCCGCTGCA
TGGGGGCCAGCAGAAACCCTCCTACAGCTCGGGCTACCAGTCCCACCAGGGCCAGCAGCAACCT
TACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGGGCAAGCAGAAAGGCTATGGCCATG
GGCAGGGCAGCTACTCCTCCTACTCCAACTCTTACAACTCCCCTGGTGGTGGTGGGGGCTCTGA
CTACAGCTACGACAGCAAATTCAACTACAGTGGTAGTGGAGGCCGGAGTGGAGGGAACAGCTAT
GGCTCCAGCGGGTCATCCTACAACACAGGCTCACATGGGGGTTATGGCGCAGGTTCTGGAGGCA
GCTCTTCATACCAAGGCAAACAAGGAGGCTACTCATCACAGTCAAACTACAGCTCCCCTGGGTC
CAGCCAGAGCTACAGCGGCCCCGCCAGCTCCTACCAGTCCTCACAGGGTGGCTACAGTCGGAAC
ACAGAACACAGCATGAACTACCAGTACAGATAAAGGCCCAGGCTGCCCCTCTCAACCTTCTGCA
CCTCTGCCTCCAACTTGTCTCGGGAGATTGAGTCTGCACATCACCAGTTGCCATGTCCACTGGG
CCAGTGCCCACCCGTCCACGTTGCTGACGTTGCCACGCTGTGAGGCGTGGTGGTCCCTGGGACC
CGTGCTGTGACCCTATTTAGCTGTGTTTTGGACTCAGTGTCTTCAGTGGTTTGTTAGTTACCAT
TACACCTTGTCTGAGTAGTGTTCCGAGTTCTTGCCGTGCGGAATCCCTCTGTCTGTTTATGCCC
GGTGTGAGTTCCATCGGGTGTCTTTAAATAGTTGCAGAAGGGATACGTCATCTGTTAATGCTTT
TTGTGAAGTGAGTTAAATGAGCTTTCATTATTTTAATGCTTAGTGTTTCAGTTTTATAAGTGAA
AATTTTATTTTAAAAAACAGTGGGGTTTGTTTTTTTGTTTTTTTGTCTTTGTTTTTGTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTGGTATGTCTGGATCATTCAGGCAGTACATTTGAATTCCGCTG
AATGTAGATAAATAAAAGAAAAACAAAACAG

hide sequence

RefSeq Acc Id:

XM_008765993 ⟹ XP_008764215

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,542 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,412 - 19,959,919 (+)	NCBI
Rnor_6.0	8	22,402,877 - 22,440,984 (+)	NCBI

Sequence:

show sequence

CGGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCC
TCCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTT
TTTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGG
ACGAAGGACGGGAACGCCAAGATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAATTTGA
AAAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGTTTTCACAT
TTCCAGCGTCCCATGAGAATTTTTGTGAATGATGATCGCCATGTGATGGCAAAGCATTCTTCAG
TATACCCAACACAAGAGGAGCTGGAGGCTGTACAGAACATGGTGTCCCACACTGAGCGGGCCCT
CAAGGCTGTCTCTGACTGGATTGATGAGCAGGAGAAAGGCAACAGCGAGCTCTCTGAAGCAGAA
AATATGGACACACCCCCAGATGATGAGAGCAAAGAAGGGGCTGGGGAACAGAAGGCGGAACACA
TGACTAGGACCCTGAGGGGCGTGATGCGGGTCGGCCTGGTAGCCAAGGGTCTTCTGCTCAAGGG
GGACTTGGATCTGGAGCTGGTTCTGCTCTGTAAGGAGAAGCCCACAACTGCCCTTCTGGACAAG
GTGGCTGACAACCTGGCCATCCAGCTTACTACTGTAACAGAAGACAAGTATGAAATACTCCAAT
CTGTGGATGATGCTGCGATTGTGATAAAAAACACAAAAGAGCCCCCCTTGTCCTTGACCATCCA
TCTGACCTCCCCTGTTGTCAGAGAAGAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTC
AACGACCCCCCGGACGTTCTGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACG
CCAAGTGGTTCCAGGCTAGAGCCAATGGGCTGAAGTCATGTGTCATTGTCATCCGTGTCCTAAG
GGACTTGTGTACCCGAGTGCCCACCTGGGGTCCTCTCAGAGGATGGCCTCTGGAGCTGCTGTGT
GAGAAGTCCATCGGCACTGCCAATAGGCCAATGGGTGCTGGTGAAGCCCTGCGGAGAGTACTGG
AGTGCCTGGCTTCCGGCATCGTAATGCCAGATGGTTCTGGCATTTATGACCCTTGTGAAAAAGA
AGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAG
CATGCTCTGCGGCTTGCTGCCTTTGGCCAGCTCCATAAAGTACTGGGAATGGACCCACTGCCTT
CCAAAATGCCCAAGAAACCAAAGAACGAGAACCCGGTGGACTATACTGTTCAAATCCCCCCCAG
CACCACCTACGCCATCACACCCATGAAACGCCCTATGGAAGAAGATGGGGAGGAGAAGTCTCCC
AGCAAAAAGAAAAAGAAGATCCAGAAGAAAGAGGAGAAGGCTGAGCCTCCCCAAGCTATGAATG
CCCTGATGAGGTTAAACCAGCTGAAGCCAGGGCTACAGTACAAGCTGATCTCCCAGACGGGTCC
TGTTCACGCTCCCATCTTCACCATGTCTGTGGAGGTAGACGGCAGTACCTTTGAGGCCTCAGGG
CCATCTAAAAAGACCGCCAAGCTACATGTGGCTGTGAAGGTGTTACAGGACATGGGATTGCCAA
CAGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAGGACTCTGCTGAGGAGTCAGATGGGAAGCC
AGCAGTAGTGGCCCCACCCCCTGTGGTGGAAGCAGTCTCCAACCCCAGTTCTGTCTTCCCTTCA
GATGCCACTACTGAGCAGGGGCCGATTTTGACTAAGCACGGCAAGAATCCTGTAATGGAGCTTA
ATGAGAAGAGACGTGGCCTCAAATATGAGCTCATTTCTGAGACAGGGGGCAGCCACGACAAACG
GTTTGTTATGGAGGTTGAGGTGGACGGACAGAAGTTTCAAGGTGCTGGCTCAAACAAAAAGGTA
GCAAAGGCTTATGCTGCACTTGCCGCATTAGAGAAGCTTTTCCCTGACGCCCCTCTTGCTCTTG
AAGCCAACAAGAAGAAAAGAGCCCCTGTGCCTGTCCGAGGCGGACCCAAATTTGCTGCCAAGCC
ACATAACCCTGGCTTTGGCATGGGAGGCCCCATGCATAATGAAGCGCCCCCACCTCCCAACATC
CGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCGAGGACGGGGGCGAGGATTTGGTGGCACCA
ACCACGGAGGAGGCTACATGAATGCTGGCGCTGGATATGGAAGCTATGGGTACAGCAGCAATTC
GGCCACAGCAGGCTACAGTCAGTTCTACAGCAATGGAGGGCATTCTGGGAATGCCGGTGGTGGA
GGCAGCGGGGGAGGTGGTGGCTCGTCCAGCTACAGCTCCTACTACCAAGGAGACAGCTACAACT
CACCAGTGCCCCCGAAACATGCTGGGAAGAAGCCGCTGCATGGGGGCCAGCAGAAACCCTCCTA
CAGCTCGGGCTACCAGTCCCACCAGGGCCAGCAGCAACCTTACAACCAGAGCCAGTACAGCAGC
TACGGCACGCCACAGGGCAAGCAGAAAGGCTATGGCCATGGGCAGGGCAGCTACTCCTCCTACT
CCAACTCTTACAACTCCCCTGGTGGTGGTGGGGGCTCTGACTACAGCTACGACAGCAAATTCAA
CTACAGTGGTAGTGGAGGCCGGAGTGGAGGGAACAGCTATGGCTCCAGCGGGTCATCCTACAAC
ACAGGCTCACATGGGGGTTATGGCGCAGGTTCTGGAGGCAGCTCTTCATACCAAGGCAAACAAG
GAGGCTACTCATCACAGTCAAACTACAGCTCCCCTGGGTCCAGCCAGAGCTACAGCGGCCCCGC
CAGCTCCTACCAGTCCTCACAGGGTGGCTACAGTCGGAACACAGAACACAGCATGAACTACCAG
TACAGATAAAGGCCCAGGCTGCCCCTCTCAACCTTCTGCACCTCTGCCTCCAACTTGTCTCGGG
AGATTGAGTCTGCACATCACCAGTTGCCATGTCCACTGGGCCAGTGCCCACCCGTCCACGTTGC
TGACGTTGCCACGCTGTGAGGCGTGGTGGTCCCTGGGACCCGTGCTGTGACCCTATTTAGCTGT
GTTTTGGACTCAGTGTCTTCAGTGGTTTGTTAGTTACCATTACACCTTGTCTGAGTAGTGTTCC
GAGTTCTTGCCGTGCGGAATCCCTCTGTCTGTTTATGCCCGGTGTGAGTTCCATCGGGTGTCTT
TAAATAGTTGCAGAAGGGATACGTCATCTGTTAATGCTTTTTGTGAAGTGAGTTAAATGAGCTT
TCATTATTTTAATGCTTAGTGTTTCAGTTTTATAAGTGAAAATTTTATTTTAAAAAACAGTGGG
GTTTGTTTTTTTGTTTTTTTGTCTTTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG
TATGTCTGGATCATTCAGGCAGTACATTTGAATTCCGCTGAATGTAGATAAATAAAAGAAAAAC
AAAACAG

hide sequence

RefSeq Acc Id:

XM_008765994 ⟹ XP_008764216

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,523 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,413 - 19,959,919 (+)	NCBI
Rnor_6.0	8	22,402,878 - 22,440,984 (+)	NCBI

Sequence:

show sequence

GGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCCT
CCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTTT
TTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGGA
CGAAGGACGGGAACGCCAAGATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAATTTGAA
AAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGCGTCCCATGA
GAATTTTTGTGAATGATGATCGCCATGTGATGGCAAAGCATTCTTCAGTATACCCAACACAAGA
GGAGCTGGAGGCTGTACAGAACATGGTGTCCCACACTGAGCGGGCCCTCAAGGCTGTCTCTGAC
TGGATTGATGAGCAGGAGAAAGGCAACAGCGAGCTCTCTGAAGCAGAAAATATGGACACACCCC
CAGATGATGAGAGCAAAGAAGGGGCTGGGGAACAGAAGGCGGAACACATGACTAGGACCCTGAG
GGGCGTGATGCGGGTCGGCCTGGTAGCCAAGGGTCTTCTGCTCAAGGGGGACTTGGATCTGGAG
CTGGTTCTGCTCTGTAAGGAGAAGCCCACAACTGCCCTTCTGGACAAGGTGGCTGACAACCTGG
CCATCCAGCTTACTACTGTAACAGAAGACAAGTATGAAATACTCCAATCTGTGGATGATGCTGC
GATTGTGATAAAAAACACAAAAGAGCCCCCCTTGTCCTTGACCATCCATCTGACCTCCCCTGTT
GTCAGAGAAGAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACG
TTCTGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGC
TAGAGCCAATGGGCTGAAGTCATGTGTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGA
GTGCCCACCTGGGGTCCTCTCAGAGGATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCA
CTGCCAATAGGCCAATGGGTGCTGGTGAAGCCCTGCGGAGAGTACTGGAGTGCCTGGCTTCCGG
CATCGTAATGCCAGATGGTTCTGGCATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATT
GGGCATCTAGACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCATGCTCTGCGGCTTG
CTGCCTTTGGCCAGCTCCATAAAGTACTGGGAATGGACCCACTGCCTTCCAAAATGCCCAAGAA
ACCAAAGAACGAGAACCCGGTGGACTATACTGTTCAAATCCCCCCCAGCACCACCTACGCCATC
ACACCCATGAAACGCCCTATGGAAGAAGATGGGGAGGAGAAGTCTCCCAGCAAAAAGAAAAAGA
AGATCCAGAAGAAAGAGGAGAAGGCTGAGCCTCCCCAAGCTATGAATGCCCTGATGAGGTTAAA
CCAGCTGAAGCCAGGGCTACAGTACAAGCTGATCTCCCAGACGGGTCCTGTTCACGCTCCCATC
TTCACCATGTCTGTGGAGGTAGACGGCAGTACCTTTGAGGCCTCAGGGCCATCTAAAAAGACCG
CCAAGCTACATGTGGCTGTGAAGGTGTTACAGGACATGGGATTGCCAACAGGCGCTGAAGGCAG
AGACTCCAGCAAGGGGGAGGACTCTGCTGAGGAGTCAGATGGGAAGCCAGCAGTAGTGGCCCCA
CCCCCTGTGGTGGAAGCAGTCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTGAGC
AGGGGCCGATTTTGACTAAGCACGGCAAGAATCCTGTAATGGAGCTTAATGAGAAGAGACGTGG
CCTCAAATATGAGCTCATTTCTGAGACAGGGGGCAGCCACGACAAACGGTTTGTTATGGAGGTT
GAGGTGGACGGACAGAAGTTTCAAGGTGCTGGCTCAAACAAAAAGGTAGCAAAGGCTTATGCTG
CACTTGCCGCATTAGAGAAGCTTTTCCCTGACGCCCCTCTTGCTCTTGAAGCCAACAAGAAGAA
AAGAGCCCCTGTGCCTGTCCGAGGCGGACCCAAATTTGCTGCCAAGCCACATAACCCTGGCTTT
GGCATGGGAGGCCCCATGCATAATGAAGCGCCCCCACCTCCCAACATCCGAGGTCGGGGCCGAG
GAGGTAACATCCGAGGGCGAGGACGGGGGCGAGGATTTGGTGGCACCAACCACGGAGGAGGCTA
CATGAATGCTGGCGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTAC
AGTCAGTTCTACAGCAATGGAGGGCATTCTGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGTG
GTGGCTCGTCCAGCTACAGCTCCTACTACCAAGGAGACAGCTACAACTCACCAGTGCCCCCGAA
ACATGCTGGGAAGAAGCCGCTGCATGGGGGCCAGCAGAAACCCTCCTACAGCTCGGGCTACCAG
TCCCACCAGGGCCAGCAGCAACCTTACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGG
GCAAGCAGAAAGGCTATGGCCATGGGCAGGGCAGCTACTCCTCCTACTCCAACTCTTACAACTC
CCCTGGTGGTGGTGGGGGCTCTGACTACAGCTACGACAGCAAATTCAACTACAGTGGTAGTGGA
GGCCGGAGTGGAGGGAACAGCTATGGCTCCAGCGGGTCATCCTACAACACAGGCTCACATGGGG
GTTATGGCGCAGGTTCTGGAGGCAGCTCTTCATACCAAGGCAAACAAGGAGGCTACTCATCACA
GTCAAACTACAGCTCCCCTGGGTCCAGCCAGAGCTACAGCGGCCCCGCCAGCTCCTACCAGTCC
TCACAGGGTGGCTACAGTCGGAACACAGAACACAGCATGAACTACCAGTACAGATAAAGGCCCA
GGCTGCCCCTCTCAACCTTCTGCACCTCTGCCTCCAACTTGTCTCGGGAGATTGAGTCTGCACA
TCACCAGTTGCCATGTCCACTGGGCCAGTGCCCACCCGTCCACGTTGCTGACGTTGCCACGCTG
TGAGGCGTGGTGGTCCCTGGGACCCGTGCTGTGACCCTATTTAGCTGTGTTTTGGACTCAGTGT
CTTCAGTGGTTTGTTAGTTACCATTACACCTTGTCTGAGTAGTGTTCCGAGTTCTTGCCGTGCG
GAATCCCTCTGTCTGTTTATGCCCGGTGTGAGTTCCATCGGGTGTCTTTAAATAGTTGCAGAAG
GGATACGTCATCTGTTAATGCTTTTTGTGAAGTGAGTTAAATGAGCTTTCATTATTTTAATGCT
TAGTGTTTCAGTTTTATAAGTGAAAATTTTATTTTAAAAAACAGTGGGGTTTGTTTTTTTGTTT
TTTTGTCTTTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATGTCTGGATCATTC
AGGCAGTACATTTGAATTCCGCTGAATGTAGATAAATAAAAGAAAAACAAAACAG

hide sequence

RefSeq Acc Id:

XM_008765995 ⟹ XP_008764217

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,526 - 28,233,055 (+)	NCBI
mRatBN7.2	8	19,922,409 - 19,956,918 (+)	NCBI
Rnor_6.0	8	22,402,877 - 22,437,407 (+)	NCBI

Sequence:

show sequence

CGGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCC
TCCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTT
TTTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGG
ACGAAGGACGGGAACGCCAAGATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAATTTGA
AAAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGGCATTGTAT
CATCATCACTTCATCACAAGAAGAAGAAGGTTTTCACATTTCCAGCGTCCCATGAGAATTTTTG
TGAATGATGATCGCCATGTGATGGCAAAGCATTCTTCAGTATACCCAACACAAGAGGAGCTGGA
GGCTGTACAGAACATGGTGTCCCACACTGAGCGGGCCCTCAAGGCTGTCTCTGACTGGATTGAT
GAGCAGGAGAAAGGCAACAGCGAGCTCTCTGAAGCAGAAAATATGGACACACCCCCAGATGATG
AGAGCAAAGAAGGGGCTGGGGAACAGAAGGCGGAACACATGACTAGGACCCTGAGGGGCGTGAT
GCGGGTCGGCCTGGTAGCCAAGGGTCTTCTGCTCAAGGGGGACTTGGATCTGGAGCTGGTTCTG
CTCTGTAAGGAGAAGCCCACAACTGCCCTTCTGGACAAGGTGGCTGACAACCTGGCCATCCAGC
TTACTACTGTAACAGAAGACAAGTATGAAATACTCCAATCTGTGGATGATGCTGCGATTGTGAT
AAAAAACACAAAAGAGCCCCCCTTGTCCTTGACCATCCATCTGACCTCCCCTGTTGTCAGAGAA
GAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTCTGGACA
GGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCTAGAGCCAA
TGGGCTGAAGTCATGTGTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGAGTGCCCACC
TGGGGTCCTCTCAGAGGATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCACTGCCAATA
GGCCAATGGGTGCTGGTGAAGCCCTGCGGAGAGTACTGGAGTGCCTGGCTTCCGGCATCGTAAT
GCCAGATGGTTCTGGCATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATTGGGCATCTA
GACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCATGCTCTGCGGCTTGCTGCCTTTG
GCCAGCTCCATAAAGTACTGGGAATGGACCCACTGCCTTCCAAAATGCCCAAGAAACCAAAGAA
CGAGAACCCGGTGGACTATACTGTTCAAATCCCCCCCAGCACCACCTACGCCATCACACCCATG
AAACGCCCTATGGAAGAAGATGGGGAGGAGAAGTCTCCCAGCAAAAAGAAAAAGAAGATCCAGA
AGAAAGAGGAGAAGGCTGAGCCTCCCCAAGCTATGAATGCCCTGATGAGGTTAAACCAGCTGAA
GCCAGGGCTACAGTACAAGCTGATCTCCCAGACGGGTCCTGTTCACGCTCCCATCTTCACCATG
TCTGTGGAGGTAGACGGCAGTACCTTTGAGGCCTCAGGGCCATCTAAAAAGACCGCCAAGCTAC
ATGTGGCTGTGAAGGTGTTACAGGACATGGGATTGCCAACAGGCGCTGAAGGCAGAGACTCCAG
CAAGGGGGAGGACTCTGCTGAGGAGTCAGATGGGAAGCCAGCAGTAGTGGCCCCACCCCCTGTG
GTGGAAGCAGTCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTGAGCAGGGGCCGA
TTTTGACTAAGCACGGCAAGAATCCTGTAATGGAGCTTAATGAGAAGAGACGTGGCCTCAAATA
TGAGCTCATTTCTGAGACAGGGGGCAGCCACGACAAACGGTTTGTTATGGAGGTTGAGGTGGAC
GGACAGAAGTTTCAAGGTGCTGGCTCAAACAAAAAGGTAGCAAAGGCTTATGCTGCACTTGCCG
CATTAGAGAAGCTTTTCCCTGACGCCCCTCTTGCTCTTGAAGCCAACAAGAAGAAAAGAGCCCC
TGTGCCTGTCCGAGGCGGACCCAAATTTGCTGCCAAGCCACATAACCCTGGCTTTGGCATGGGA
GGCCCCATGCATAATGAAGCGCCCCCACCTCCCAACATCCGAGGTCGGGGCCGAGGAGGTAACA
TCCGAGGGCGAGGACGGGGGCGAGGATTTGGTGGCACCAACCACGGAGGAGGCTACATGAATGC
TGGCGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTACAGTGACTTT
TTCACAGACTGCTACGGCTATCATGATTTTGGGGCTTCCTAGAGCGTCTAAAAGTATTGACACA
AAATCAACTTTTTACTCCAATTTCCTCCAACTCCAAAACCCAAAGTGTCCGTGCTGTGTCCCTG
TGCTTCACTGGGGTTCTCAACCGTGGCTTTCCACCGCAGCCTGTCTGAAACTGTTAGCCTGCAG
ACTTAAGACAATGGCAGTTTCTATCATGAGTTTGCCTTTGAACTTGGTCATTTCGAAGTTCACA
CTAAGTGGAAAAACCCTTTTCTCAGAGAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTAGCCTTGCACAGAATTCTAGAGCCAGCGTTGTTCAGCATCAAGGCAAAAGCC
CATCATTGCTTTTTATGGAAAGCATTCTTTTATTTAAAGAAACAGATAATGGCACGTTTTAATC
TACCTTTGTCTTAATTTACAGCAGGTTTTGTATGCAATTTTTAACCTTTTCACAAGTTTTCACA
TCTGGTTGATGCCTTTGGCAGTGATGAAAACTTTCAGCACATCTGAATCCACAGCAGCTGACTT
TTTTCCTTGCCTTTTGAATGAGCATGTAAACCTCTGGGATGGCCAGAACTTGTGTACTGCGTAG
AGCAGGGCCTCCCACCTTTTGTAAATGCTCTGGTGGGTCCTTGGGGTGAGGAGGTTCTGTGGCT
GCTTTAGTTAAGAGAGTGAACTTGCAAAGGCATCAAAACTGCGCTTCCGTTACTTGTGTGAGAA
ATGAGACAGGCTTGAGAGGAGGGAATAACGTAAAATTTTGCAAGTCCTGATTGCAGCGTGGACT
CCTGGATTGGGTTTGGCTTTGTTTTCTTTTTCACAATGGGGCTTTAAAACTGAGCTGGAGGAGC
CTGACACATCCCACCCTTTTTTTCCCCCAGCAAATTGCTGACTTTGGCCCGACCAGGGTCTATA
CTGCCTGGCACACAGACACTGAATCTGTGTGCCTAGAATTTGTCCCAGTGTGTAAAGTGGTGGG
GAGCCTTGTGATATTGTGGTTAGGCCTCTGCTTTGTAGTTTTTGCTGCAGATTTGCCCCTGCCT
TGACTTGCAAGATTTGACGTTTATTCAGGCAAAAAGTGGTCAAAATGGTTACTGTGTGATTTGT
TCCCCAAGGTTTAAAAAGTCAGTGAAACTTTCTAAGATTTTGCATGATGTATTTTATTTTATTT
TTATTTTTTAGAAAGTTCTTGTTGGCAAATAATGTCTTTTTATACCAGGAAATAGTTCTGAATG
ACGTTGAAGACCTTCCCTTCCTTATTACTATTATTTTTTAAATGAATACATGTTAAAGTAATGA
GC

hide sequence

RefSeq Acc Id:

XM_008765996 ⟹ XP_008764218

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,542 - 28,233,055 (+)	NCBI
mRatBN7.2	8	19,922,425 - 19,956,910 (+)	NCBI
Rnor_6.0	8	22,402,878 - 22,437,407 (+)	NCBI

Sequence:

show sequence

GGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCCT
CCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTTT
TTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGGA
CGAAGGACGGGAACGCCAAGATAGTTGAAGTATTGGTAACACCAAGGAACTGTCACAATTTGAA
AAGATAAGCCAAGGCTGATTTCCAGACACTACAGGAAAAAAGGAGGGGAAAATGGCATTGTATC
ATCATCACTTCATCACAAGAAGAAGAAGGCGTCCCATGAGAATTTTTGTGAATGATGATCGCCA
TGTGATGGCAAAGCATTCTTCAGTATACCCAACACAAGAGGAGCTGGAGGCTGTACAGAACATG
GTGTCCCACACTGAGCGGGCCCTCAAGGCTGTCTCTGACTGGATTGATGAGCAGGAGAAAGGCA
ACAGCGAGCTCTCTGAAGCAGAAAATATGGACACACCCCCAGATGATGAGAGCAAAGAAGGGGC
TGGGGAACAGAAGGCGGAACACATGACTAGGACCCTGAGGGGCGTGATGCGGGTCGGCCTGGTA
GCCAAGGGTCTTCTGCTCAAGGGGGACTTGGATCTGGAGCTGGTTCTGCTCTGTAAGGAGAAGC
CCACAACTGCCCTTCTGGACAAGGTGGCTGACAACCTGGCCATCCAGCTTACTACTGTAACAGA
AGACAAGTATGAAATACTCCAATCTGTGGATGATGCTGCGATTGTGATAAAAAACACAAAAGAG
CCCCCCTTGTCCTTGACCATCCATCTGACCTCCCCTGTTGTCAGAGAAGAAATGGAGAAAGTAT
TAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTCTGGACAGGCAGAAATGCCTTGC
TGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCTAGAGCCAATGGGCTGAAGTCATGT
GTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGAGTGCCCACCTGGGGTCCTCTCAGAG
GATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCACTGCCAATAGGCCAATGGGTGCTGG
TGAAGCCCTGCGGAGAGTACTGGAGTGCCTGGCTTCCGGCATCGTAATGCCAGATGGTTCTGGC
ATTTATGACCCTTGTGAAAAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGG
AAGATATCACACAGAGTGCGCAGCATGCTCTGCGGCTTGCTGCCTTTGGCCAGCTCCATAAAGT
ACTGGGAATGGACCCACTGCCTTCCAAAATGCCCAAGAAACCAAAGAACGAGAACCCGGTGGAC
TATACTGTTCAAATCCCCCCCAGCACCACCTACGCCATCACACCCATGAAACGCCCTATGGAAG
AAGATGGGGAGGAGAAGTCTCCCAGCAAAAAGAAAAAGAAGATCCAGAAGAAAGAGGAGAAGGC
TGAGCCTCCCCAAGCTATGAATGCCCTGATGAGGTTAAACCAGCTGAAGCCAGGGCTACAGTAC
AAGCTGATCTCCCAGACGGGTCCTGTTCACGCTCCCATCTTCACCATGTCTGTGGAGGTAGACG
GCAGTACCTTTGAGGCCTCAGGGCCATCTAAAAAGACCGCCAAGCTACATGTGGCTGTGAAGGT
GTTACAGGACATGGGATTGCCAACAGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAGGACTCT
GCTGAGGAGTCAGATGGGAAGCCAGCAGTAGTGGCCCCACCCCCTGTGGTGGAAGCAGTCTCCA
ACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTGAGCAGGGGCCGATTTTGACTAAGCACGG
CAAGAATCCTGTAATGGAGCTTAATGAGAAGAGACGTGGCCTCAAATATGAGCTCATTTCTGAG
ACAGGGGGCAGCCACGACAAACGGTTTGTTATGGAGGTTGAGGTGGACGGACAGAAGTTTCAAG
GTGCTGGCTCAAACAAAAAGGTAGCAAAGGCTTATGCTGCACTTGCCGCATTAGAGAAGCTTTT
CCCTGACGCCCCTCTTGCTCTTGAAGCCAACAAGAAGAAAAGAGCCCCTGTGCCTGTCCGAGGC
GGACCCAAATTTGCTGCCAAGCCACATAACCCTGGCTTTGGCATGGGAGGCCCCATGCATAATG
AAGCGCCCCCACCTCCCAACATCCGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCGAGGACG
GGGGCGAGGATTTGGTGGCACCAACCACGGAGGAGGCTACATGAATGCTGGCGCTGGATATGGA
AGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTACAGTGACTTTTTCACAGACTGCTACG
GCTATCATGATTTTGGGGCTTCCTAGAGCGTCTAAAAGTATTGACACAAAATCAACTTTTTACT
CCAATTTCCTCCAACTCCAAAACCCAAAGTGTCCGTGCTGTGTCCCTGTGCTTCACTGGGGTTC
TCAACCGTGGCTTTCCACCGCAGCCTGTCTGAAACTGTTAGCCTGCAGACTTAAGACAATGGCA
GTTTCTATCATGAGTTTGCCTTTGAACTTGGTCATTTCGAAGTTCACACTAAGTGGAAAAACCC
TTTTCTCAGAGAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCC
TTGCACAGAATTCTAGAGCCAGCGTTGTTCAGCATCAAGGCAAAAGCCCATCATTGCTTTTTAT
GGAAAGCATTCTTTTATTTAAAGAAACAGATAATGGCACGTTTTAATCTACCTTTGTCTTAATT
TACAGCAGGTTTTGTATGCAATTTTTAACCTTTTCACAAGTTTTCACATCTGGTTGATGCCTTT
GGCAGTGATGAAAACTTTCAGCACATCTGAATCCACAGCAGCTGACTTTTTTCCTTGCCTTTTG
AATGAGCATGTAAACCTCTGGGATGGCCAGAACTTGTGTACTGCGTAGAGCAGGGCCTCCCACC
TTTTGTAAATGCTCTGGTGGGTCCTTGGGGTGAGGAGGTTCTGTGGCTGCTTTAGTTAAGAGAG
TGAACTTGCAAAGGCATCAAAACTGCGCTTCCGTTACTTGTGTGAGAAATGAGACAGGCTTGAG
AGGAGGGAATAACGTAAAATTTTGCAAGTCCTGATTGCAGCGTGGACTCCTGGATTGGGTTTGG
CTTTGTTTTCTTTTTCACAATGGGGCTTTAAAACTGAGCTGGAGGAGCCTGACACATCCCACCC
TTTTTTTCCCCCAGCAAATTGCTGACTTTGGCCCGACCAGGGTCTATACTGCCTGGCACACAGA
CACTGAATCTGTGTGCCTAGAATTTGTCCCAGTGTGTAAAGTGGTGGGGAGCCTTGTGATATTG
TGGTTAGGCCTCTGCTTTGTAGTTTTTGCTGCAGATTTGCCCCTGCCTTGACTTGCAAGATTTG
ACGTTTATTCAGGCAAAAAGTGGTCAAAATGGTTACTGTGTGATTTGTTCCCCAAGGTTTAAAA
AGTCAGTGAAACTTTCTAAGATTTTGCATGATGTATTTTATTTTATTTTTATTTTTTAGAAAGT
TCTTGTTGGCAAATAATGTCTTTTTATACCAGGAAATAGTTCTGAATGACGTTGAAGACCTTCC
CTTCCTTATTACTATTATTTTTTAAATGAATACATGTTAAAGTAATGAGC

hide sequence

RefSeq Acc Id:

XM_017595942 ⟹ XP_017451431

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,578 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,411 - 19,959,919 (+)	NCBI
Rnor_6.0	8	22,402,877 - 22,440,984 (+)	NCBI

Sequence:

show sequence

CGGTCAGTCACGTGGCCCTGCACCTCCCCGGCGCGCGCCCGCCCGCTCGCTCGCCCCCGGCTCC
TCCTCCTCTTCTCGCCATTGCAGTTGGGACTGAAGCAGCCCCGGCGAAAACCGCGTGGCTCTTT
TTTTGAAGGGGGTTGTGAAGACTCCGGAAGGCTGGTGGCAGGAGGGTGGCGGCGGCGCCTGAGG
ACGAAGGACGGGAACGCCAAGGAGAACAGAAGAGGGTGTCGGCCTTCTTGGGACAGATGATTGT
AAGCTGCATGTGGGTGCCAGGAACTGAACCCTGGTTCCTCTGCAAGAGCAGTAAATAGTTGAAG
TATTGGTAACACCAAGGAACTGTCACAATTTGAAAAGATAAGCCAAGGCTGATTTCCAGACACT
ACAGGAAAAAAGGAGGGGAAAATGGCATTGTATCATCATCACTTCATCACAAGAAGAAGAAGGT
TTTCACATTTCCAGCGTCCCATGAGAATTTTTGTGAATGATGATCGCCATGTGATGGCAAAGCA
TTCTTCAGTATACCCAACACAAGAGGAGCTGGAGGCTGTACAGAACATGGTGTCCCACACTGAG
CGGGCCCTCAAGGCTGTCTCTGACTGGATTGATGAGCAGGAGAAAGGCAACAGCGAGCTCTCTG
AAGCAGAAAATATGGACACACCCCCAGATGATGAGAGCAAAGAAGGGGCTGGGGAACAGAAGGC
GGAACACATGACTAGGACCCTGAGGGGCGTGATGCGGGTCGGCCTGGTAGCCAAGGGTCTTCTG
CTCAAGGGGGACTTGGATCTGGAGCTGGTTCTGCTCTGTAAGGAGAAGCCCACAACTGCCCTTC
TGGACAAGGTGGCTGACAACCTGGCCATCCAGCTTACTACTGTAACAGAAGACAAGTATGAAAT
ACTCCAATCTGTGGATGATGCTGCGATTGTGATAAAAAACACAAAAGAGCCCCCCTTGTCCTTG
ACCATCCATCTGACCTCCCCTGTTGTCAGAGAAGAAATGGAGAAAGTATTAGCTGGAGAAACGC
TATCAGTCAACGACCCCCCGGACGTTCTGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCT
CCGACACGCCAAGTGGTTCCAGGCTAGAGCCAATGGGCTGAAGTCATGTGTCATTGTCATCCGT
GTCCTAAGGGACTTGTGTACCCGAGTGCCCACCTGGGGTCCTCTCAGAGGATGGCCTCTGGAGC
TGCTGTGTGAGAAGTCCATCGGCACTGCCAATAGGCCAATGGGTGCTGGTGAAGCCCTGCGGAG
AGTACTGGAGTGCCTGGCTTCCGGCATCGTAATGCCAGATGGTTCTGGCATTTATGACCCTTGT
GAAAAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGGAAGATATCACACAGA
GTGCGCAGCATGCTCTGCGGCTTGCTGCCTTTGGCCAGCTCCATAAAGTACTGGGAATGGACCC
ACTGCCTTCCAAAATGCCCAAGAAACCAAAGAACGAGAACCCGGTGGACTATACTGTTCAAATC
CCCCCCAGCACCACCTACGCCATCACACCCATGAAACGCCCTATGGAAGAAGATGGGGAGGAGA
AGTCTCCCAGCAAAAAGAAAAAGAAGATCCAGAAGAAAGAGGAGAAGGCTGAGCCTCCCCAAGC
TATGAATGCCCTGATGAGGTTAAACCAGCTGAAGCCAGGGCTACAGTACAAGCTGATCTCCCAG
ACGGGTCCTGTTCACGCTCCCATCTTCACCATGTCTGTGGAGGTAGACGGCAGTACCTTTGAGG
CCTCAGGGCCATCTAAAAAGACCGCCAAGCTACATGTGGCTGTGAAGGTGTTACAGGACATGGG
ATTGCCAACAGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAGGACTCTGCTGAGGAGTCAGAT
GGGAAGCCAGCAGTAGTGGCCCCACCCCCTGTGGTGGAAGCAGTCTCCAACCCCAGTTCTGTCT
TCCCTTCAGATGCCACTACTGAGCAGGGGCCGATTTTGACTAAGCACGGCAAGAATCCTGTAAT
GGAGCTTAATGAGAAGAGACGTGGCCTCAAATATGAGCTCATTTCTGAGACAGGGGGCAGCCAC
GACAAACGGTTTGTTATGGAGGTTGAGGTGGACGGACAGAAGTTTCAAGGTGCTGGCTCAAACA
AAAAGGTAGCAAAGGCTTATGCTGCACTTGCCGCATTAGAGAAGCTTTTCCCTGACGCCCCTCT
TGCTCTTGAAGCCAACAAGAAGAAAAGAGCCCCTGTGCCTGTCCGAGGCGGACCCAAATTTGCT
GCCAAGCCACATAACCCTGGCTTTGGCATGGGAGGCCCCATGCATAATGAAGCGCCCCCACCTC
CCAACATCCGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCGAGGACGGGGGCGAGGATTTGG
TGGCACCAACCACGGAGGAGGCTACATGAATGCTGGCGCTGGATATGGAAGCTATGGGTACAGC
AGCAATTCGGCCACAGCAGGCTACAGTCAGTTCTACAGCAATGGAGGGCATTCTGGGAATGCCG
GTGGTGGAGGCAGCGGGGGAGGTGGTGGCTCGTCCAGCTACAGCTCCTACTACCAAGGAGACAG
CTACAACTCACCAGTGCCCCCGAAACATGCTGGGAAGAAGCCGCTGCATGGGGGCCAGCAGAAA
CCCTCCTACAGCTCGGGCTACCAGTCCCACCAGGGCCAGCAGCAACCTTACAACCAGAGCCAGT
ACAGCAGCTACGGCACGCCACAGGGCAAGCAGAAAGGCTATGGCCATGGGCAGGGCAGCTACTC
CTCCTACTCCAACTCTTACAACTCCCCTGGTGGTGGTGGGGGCTCTGACTACAGCTACGACAGC
AAATTCAACTACAGTGGTAGTGGAGGCCGGAGTGGAGGGAACAGCTATGGCTCCAGCGGGTCAT
CCTACAACACAGGCTCACATGGGGGTTATGGCGCAGGTTCTGGAGGCAGCTCTTCATACCAAGG
CAAACAAGGAGGCTACTCATCACAGTCAAACTACAGCTCCCCTGGGTCCAGCCAGAGCTACAGC
GGCCCCGCCAGCTCCTACCAGTCCTCACAGGGTGGCTACAGTCGGAACACAGAACACAGCATGA
ACTACCAGTACAGATAAAGGCCCAGGCTGCCCCTCTCAACCTTCTGCACCTCTGCCTCCAACTT
GTCTCGGGAGATTGAGTCTGCACATCACCAGTTGCCATGTCCACTGGGCCAGTGCCCACCCGTC
CACGTTGCTGACGTTGCCACGCTGTGAGGCGTGGTGGTCCCTGGGACCCGTGCTGTGACCCTAT
TTAGCTGTGTTTTGGACTCAGTGTCTTCAGTGGTTTGTTAGTTACCATTACACCTTGTCTGAGT
AGTGTTCCGAGTTCTTGCCGTGCGGAATCCCTCTGTCTGTTTATGCCCGGTGTGAGTTCCATCG
GGTGTCTTTAAATAGTTGCAGAAGGGATACGTCATCTGTTAATGCTTTTTGTGAAGTGAGTTAA
ATGAGCTTTCATTATTTTAATGCTTAGTGTTTCAGTTTTATAAGTGAAAATTTTATTTTAAAAA
ACAGTGGGGTTTGTTTTTTTGTTTTTTTGTCTTTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTGGTATGTCTGGATCATTCAGGCAGTACATTTGAATTCCGCTGAATGTAGATAAATAAA
AGAAAAACAAAACAG

hide sequence

RefSeq Acc Id:

XM_039082210 ⟹ XP_038938138

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,199,199 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,932,180 - 19,959,919 (+)	NCBI

RefSeq Acc Id:

XM_039082212 ⟹ XP_038938140

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,578 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,412 - 19,959,919 (+)	NCBI

RefSeq Acc Id:

XM_039082213 ⟹ XP_038938141

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,526 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,922,410 - 19,960,495 (+)	NCBI

RefSeq Acc Id:

XM_039082216 ⟹ XP_038938144

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,226,074 - 28,236,634 (+)	NCBI
mRatBN7.2	8	19,949,931 - 19,960,495 (+)	NCBI

RefSeq Acc Id:

XM_063266238 ⟹ XP_063122308

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,578 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266239 ⟹ XP_063122309

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,542 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266240 ⟹ XP_063122310

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,209,003 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266241 ⟹ XP_063122311

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,199,059 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266242 ⟹ XP_063122312

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,578 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266244 ⟹ XP_063122314

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,523 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266245 ⟹ XP_063122315

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,454 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266246 ⟹ XP_063122316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,220,091 - 28,236,634 (+)	NCBI

RefSeq Acc Id:

XM_063266247 ⟹ XP_063122317

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,542 - 28,233,055 (+)	NCBI

RefSeq Acc Id:

XM_063266248 ⟹ XP_063122318

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,610 - 28,233,055 (+)	NCBI

RefSeq Acc Id:

XM_063266249 ⟹ XP_063122319

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,523 - 28,233,055 (+)	NCBI

RefSeq Acc Id:

XM_063266250 ⟹ XP_063122320

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,578 - 28,233,055 (+)	NCBI

RefSeq Acc Id:

XM_063266252 ⟹ XP_063122322

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	28,198,523 - 28,233,055 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_445864	(Get FASTA)	NCBI Sequence Viewer
	XP_008764212	(Get FASTA)	NCBI Sequence Viewer
	XP_008764213	(Get FASTA)	NCBI Sequence Viewer
	XP_008764214	(Get FASTA)	NCBI Sequence Viewer
	XP_008764215	(Get FASTA)	NCBI Sequence Viewer
	XP_008764216	(Get FASTA)	NCBI Sequence Viewer
	XP_008764217	(Get FASTA)	NCBI Sequence Viewer
	XP_008764218	(Get FASTA)	NCBI Sequence Viewer
	XP_017451431	(Get FASTA)	NCBI Sequence Viewer
	XP_038938138	(Get FASTA)	NCBI Sequence Viewer
	XP_038938140	(Get FASTA)	NCBI Sequence Viewer
	XP_038938141	(Get FASTA)	NCBI Sequence Viewer
	XP_038938144	(Get FASTA)	NCBI Sequence Viewer
	XP_063122308	(Get FASTA)	NCBI Sequence Viewer
	XP_063122309	(Get FASTA)	NCBI Sequence Viewer
	XP_063122310	(Get FASTA)	NCBI Sequence Viewer
	XP_063122311	(Get FASTA)	NCBI Sequence Viewer
	XP_063122312	(Get FASTA)	NCBI Sequence Viewer
	XP_063122314	(Get FASTA)	NCBI Sequence Viewer
	XP_063122315	(Get FASTA)	NCBI Sequence Viewer
	XP_063122316	(Get FASTA)	NCBI Sequence Viewer
	XP_063122317	(Get FASTA)	NCBI Sequence Viewer
	XP_063122318	(Get FASTA)	NCBI Sequence Viewer
	XP_063122319	(Get FASTA)	NCBI Sequence Viewer
	XP_063122320	(Get FASTA)	NCBI Sequence Viewer
	XP_063122322	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF31446	(Get FASTA)	NCBI Sequence Viewer
	EDL78299	(Get FASTA)	NCBI Sequence Viewer
	EDL78300	(Get FASTA)	NCBI Sequence Viewer
	EDL78301	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009354.7
	ENSRNOP00000072369.2
	ENSRNOP00000073179.2
	ENSRNOP00000086301.1
GenBank Protein	Q9JIL3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_445864 ⟸ NM_053412

- UniProtKB:

Q9JIL3 (UniProtKB/Swiss-Prot), A6JNR5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MALYHHHFITRRRRRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVSDWIDE
QEKGNSELSEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLL
CKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVREE
MEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTW
GPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLD
RQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAITPMK
RPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAPIFTMS
VEVDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVAPPPVV
EAVSNPSSVFPSDATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDG
QKFQGAGSNKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPGFGMGG
PMHNEAPPPPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAGYSQFY
SNGGHYGNAGGGGSGGGGGSSSYSSYYQGDSYNSPVPPKHAGKKPLHGGQQKPSYSSGYQSHQG
QQQPYNQSQYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGSGGRSG
GNSYGSSGSSYNTGSHGGYGAGSGGSSSYQGKQGGYSSQSNYSSPGSSQSYSGPASSYQSSQGG
YSRNTEHSMNYQYR

hide sequence

RefSeq Acc Id:	XP_008764213 ⟸ XM_008765991
- Peptide Label:	isoform X2
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MALYHHHFITRRRRFSHFQRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVS DWIDEQEKGNSELSEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDL ELVLLCKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSP VVREEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCT RVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDA IGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYA ITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAP IFTMSVEVDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVA PPPVVEAVSNPSSVFPSDATTEGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEV EVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPGF GMGGPMHNEAPPPPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAGY SQFYSNGGHSGNAGGGGSGGGGGSSSYSSYYQGDSYNSPVPPKHAGKKPLHGGQQKPSYSSGYQ SHQGQQQPYNQSQYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGSG GRSGGNSYGSSGSSYNTGSHGGYGAGSGGSSSYQGKQGGYSSQSNYSSPGSSQSYSGPASSYQS SQGGYSRNTEHSMNYQYR hide sequence

RefSeq Acc Id:	XP_008764212 ⟸ XM_008765990
- Peptide Label:	isoform X1
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MALYHHHFITRRRRFSHFQRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVS DWIDEQEKGNSELSEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDL ELVLLCKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSP VVREEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCT RVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDA IGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYA ITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAP IFTMSVEVDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVA PPPVVEAVSNPSSVFPSDATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVME VEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPG FGMGGPMHNEAPPPPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAG YSQFYSNGGHSGNAGGGGSGGGGGSSSYSSYYQGDSYNSPVPPKHAGKKPLHGGQQKPSYSSGY QSHQGQQQPYNQSQYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGS GGRSGGNSYGSSGSSYNTGSHGGYGAGSGGSSSYQGKQGGYSSQSNYSSPGSSQSYSGPASSYQ SSQGGYSRNTEHSMNYQYR hide sequence

RefSeq Acc Id:	XP_008764214 ⟸ XM_008765992
- Peptide Label:	isoform X3
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot), A6JNR5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALYHHHFITRRRRRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVSDWIDE QEKGNSELSEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLL CKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVREE MEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTW GPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLD RQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAITPMK RPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAPIFTMS VEVDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVAPPPVV EAVSNPSSVFPSDATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDG QKFQGAGSNKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPGFGMGG PMHNEAPPPPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAGYSQFY SNGGHSGNAGGGGSGGGGGSSSYSSYYQGDSYNSPVPPKHAGKKPLHGGQQKPSYSSGYQSHQG QQQPYNQSQYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGSGGRSG GNSYGSSGSSYNTGSHGGYGAGSGGSSSYQGKQGGYSSQSNYSSPGSSQSYSGPASSYQSSQGG YSRNTEHSMNYQYR hide sequence

RefSeq Acc Id:	XP_008764215 ⟸ XM_008765993
- Peptide Label:	isoform X5
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot), A0A0G2K2T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFSHFQRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKGNSEL SEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKEKPTTA LLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVREEMEKVLAGE TLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPL ELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDIT QSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAITPMKRPMEEDGE EKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAPIFTMSVEVDGSTF EASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVAPPPVVEAVSNPSS VFPSDATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGS NKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPGFGMGGPMHNEAPP PPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAGYSQFYSNGGHSGN AGGGGSGGGGGSSSYSSYYQGDSYNSPVPPKHAGKKPLHGGQQKPSYSSGYQSHQGQQQPYNQS QYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGSGGRSGGNSYGSSG SSYNTGSHGGYGAGSGGSSSYQGKQGGYSSQSNYSSPGSSQSYSGPASSYQSSQGGYSRNTEHS MNYQYR hide sequence

RefSeq Acc Id:	XP_008764216 ⟸ XM_008765994
- Peptide Label:	isoform X6
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot), A0A0G2K4U6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKGNSELSEAEN MDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKEKPTTALLDKV ADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVREEMEKVLAGETLSVN DPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCE KSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQH ALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAITPMKRPMEEDGEEKSPS KKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAPIFTMSVEVDGSTFEASGP SKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVAPPPVVEAVSNPSSVFPSD ATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVA KAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPGFGMGGPMHNEAPPPPNIR GRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAGYSQFYSNGGHSGNAGGGG SGGGGGSSSYSSYYQGDSYNSPVPPKHAGKKPLHGGQQKPSYSSGYQSHQGQQQPYNQSQYSSY GTPQGKQKGYGHGQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGSGGRSGGNSYGSSGSSYNT GSHGGYGAGSGGSSSYQGKQGGYSSQSNYSSPGSSQSYSGPASSYQSSQGGYSRNTEHSMNYQY R hide sequence

RefSeq Acc Id:

XP_008764217 ⟸ XM_008765995

- Peptide Label:

isoform X10

- Sequence:

show sequence

MALYHHHFITRRRRFSHFQRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVS
DWIDEQEKGNSELSEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDL
ELVLLCKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSP
VVREEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCT
RVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDA
IGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYA
ITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAP
IFTMSVEVDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVA
PPPVVEAVSNPSSVFPSDATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVME
VEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPG
FGMGGPMHNEAPPPPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAG
YSDFFTDCYGYHDFGAS

hide sequence

RefSeq Acc Id:	XP_008764218 ⟸ XM_008765996
- Peptide Label:	isoform X12
- UniProtKB:	F1LRU1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALYHHHFITRRRRRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVSDWIDE QEKGNSELSEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLL CKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVREE MEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTW GPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLD RQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAITPMK RPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAPIFTMS VEVDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVAPPPVV EAVSNPSSVFPSDATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDG QKFQGAGSNKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPGFGMGG PMHNEAPPPPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAGYSDFF TDCYGYHDFGAS hide sequence

RefSeq Acc Id:	XP_017451431 ⟸ XM_017595942
- Peptide Label:	isoform X1
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MALYHHHFITRRRRFSHFQRPMRIFVNDDRHVMAKHSSVYPTQEELEAVQNMVSHTERALKAVS DWIDEQEKGNSELSEAENMDTPPDDESKEGAGEQKAEHMTRTLRGVMRVGLVAKGLLLKGDLDL ELVLLCKEKPTTALLDKVADNLAIQLTTVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSP VVREEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCT RVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDA IGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYA ITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLISQTGPVHAP IFTMSVEVDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVA PPPVVEAVSNPSSVFPSDATTEQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVME VEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPLALEANKKKRAPVPVRGGPKFAAKPHNPG FGMGGPMHNEAPPPPNIRGRGRGGNIRGRGRGRGFGGTNHGGGYMNAGAGYGSYGYSSNSATAG YSQFYSNGGHSGNAGGGGSGGGGGSSSYSSYYQGDSYNSPVPPKHAGKKPLHGGQQKPSYSSGY QSHQGQQQPYNQSQYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGS GGRSGGNSYGSSGSSYNTGSHGGYGAGSGGSSSYQGKQGGYSSQSNYSSPGSSQSYSGPASSYQ SSQGGYSRNTEHSMNYQYR hide sequence

Ensembl Acc Id:

ENSRNOP00000072369 ⟸ ENSRNOT00000079230

Ensembl Acc Id:

ENSRNOP00000073179 ⟸ ENSRNOT00000085320

Ensembl Acc Id:

ENSRNOP00000009354 ⟸ ENSRNOT00000009354

RefSeq Acc Id:	XP_038938141 ⟸ XM_039082213
- Peptide Label:	isoform X8
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038938140 ⟸ XM_039082212
- Peptide Label:	isoform X6
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot), A0A0G2K4U6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038938138 ⟸ XM_039082210
- Peptide Label:	isoform X1
- UniProtKB:	Q9JIL3 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038938144 ⟸ XM_039082216
- Peptide Label:	isoform X16

Ensembl Acc Id:

ENSRNOP00000086301 ⟸ ENSRNOT00000101953

RefSeq Acc Id:	XP_063122315 ⟸ XM_063266245
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063122314 ⟸ XM_063266244
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063122319 ⟸ XM_063266249
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6A0Y6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122322 ⟸ XM_063266252
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063122309 ⟸ XM_063266239
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063122317 ⟸ XM_063266247
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063122312 ⟸ XM_063266242
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K4U6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122308 ⟸ XM_063266238
- Peptide Label:	isoform X3
- UniProtKB:	A6JNR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122320 ⟸ XM_063266250
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6A0Y6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122318 ⟸ XM_063266248
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063122311 ⟸ XM_063266241
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K4U6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122310 ⟸ XM_063266240
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K2T6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122316 ⟸ XM_063266246
- Peptide Label:	isoform X11

Protein Domains

DRBM DZF

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9JIL3-F1-model_v2	AlphaFold	Q9JIL3	1-897	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695787

Promoter ID:

EPDNEW_R6304

Type:

initiation region

Name:

Ilf3_1

Description:

interleukin enhancer binding factor 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	22,402,946 - 22,403,006	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619734	AgrOrtholog
BioCyc Gene	G2FUF-31421	BioCyc
Ensembl Genes	ENSRNOG00000022741	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000009354.7	UniProtKB/TrEMBL
	ENSRNOT00000079230.2	UniProtKB/TrEMBL
	ENSRNOT00000085320.2	UniProtKB/TrEMBL
	ENSRNOT00000101953.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1410.40	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.160.20	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.460.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	dsRBD_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DZF_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DZF_dom_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DZF_dom_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ILF3/NF90	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NT_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:84472	UniProtKB/Swiss-Prot
NCBI Gene	84472	ENTREZGENE
PANTHER	PTHR45762:SF4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZINC FINGER RNA-BINDING PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	dsrm	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DZF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DZF_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Ilf3	PhenoGen
PROSITE	DS_RBD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DZF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000022741	RatGTEx
SMART	DSRM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DZF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	dsRNA-binding domain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2K2T6	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K4U6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A0Y6	ENTREZGENE, UniProtKB/TrEMBL
	A6JNR5	ENTREZGENE, UniProtKB/TrEMBL
	F1LRU1	ENTREZGENE, UniProtKB/TrEMBL
	ILF3_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-02-26	Ilf3	interleukin enhancer binding factor 3			Symbol and Name status set to approved	625702	APPROVED
2002-08-07	Ilf3	interleukin enhancer binding factor 3			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_physical_interaction	COOH-terminal region rich in arginine, glycine, and serine is responsible for interaction with protein-arginine methyltransferase I	633174

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar