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ONTOLOGY REPORT - ANNOTATIONS


Term:viral process
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Accession:GO:0016032 term browser browse the term
Definition:A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
Comment:See also the biological process terms 'viral infectious cycle ; GO:0019058' and 'lysogeny ; GO:0030069'.
Synonyms:exact_synonym: virus process
 related_synonym: viral infection;   virulence
 alt_id: GO:0022415
 xref: Wikipedia:Viral_life_cycle


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viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC118772.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr10:70,484,134...70,506,963 JBrowse link
G Bicd1 BICD cargo adaptor 1 involved_in ISO (PMID:20089649) RGD PMID:20089649 NCBI chr 4:184,018,845...184,167,628
Ensembl chr 4:184,019,087...184,165,540
JBrowse link
G Nlrx1 NLR family member X1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:48,583,559...48,600,203
Ensembl chr 8:48,584,071...48,597,867
JBrowse link
G Pdcl3 phosducin-like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:45,672,257...45,680,728
Ensembl chr 9:45,672,157...45,680,799
JBrowse link
G Slc20a2 solute carrier family 20 member 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:74,318,287...74,408,030
Ensembl chr16:74,317,899...74,408,030
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:22574148) RGD PMID:22574148 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:171,276,062...171,292,062
Ensembl chr 3:171,276,062...171,286,537
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in IBA
ISO
PMID:21873635
(PMID:12857889)
RGD PMID:12857889, PMID:21873635 RGD:13792537 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109
JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 involved_in IBA
ISO
PMID:21873635
(PMID:12915581)
RGD PMID:12915581, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
DNA-templated viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11096080) RGD PMID:11096080 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
early viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt2 cyclin T2 involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr13:44,475,959...44,516,892
Ensembl chr13:44,475,970...44,515,739
JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr19:45,938,433...45,946,647
Ensembl chr19:45,938,915...45,945,741
JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111
JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615
JBrowse link
establishment of viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) RGD PMID:20091349 NCBI chr 5:59,063,532...59,068,196
Ensembl chr 5:59,063,531...59,068,188
JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:18562523) RGD PMID:16081529 PMID:18562523 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:21501828)
UniProt
RGD
PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO
IEA
ISS
(PMID:11296287)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:11296287 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in IBA
ISO
PMID:21873635
(PMID:12915581)
RGD PMID:12915581, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5544501|PMID:24310610) RGD PMID:24310610 MGI:5544501 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:32276428) RGD PMID:32276428 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 Cd4 molecule involved_in ISO (PMID:9166430) RGD PMID:9166430 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176
JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISO (PMID:18647839) RGD PMID:18647839 NCBI chr 1:47,206,892...47,213,785
Ensembl chr 1:47,206,895...47,213,749
JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) RGD PMID:25540360 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090
JBrowse link
IRES-dependent viral translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:17947529) RGD PMID:17947529 NCBI chr 2:205,525,194...205,552,987
Ensembl chr 2:205,525,204...205,552,991
JBrowse link
G Denr density regulated reinitiation and release factor involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr12:38,095,717...38,117,758
Ensembl chr12:38,096,034...38,116,919
JBrowse link
G Eif2d eukaryotic translation initiation factor 2D involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr13:47,935,138...47,958,459
Ensembl chr13:47,935,163...47,954,090
JBrowse link
G Eif3a eukaryotic translation initiation factor 3, subunit A involved_in ISO (PMID:23766293), (PMID:24357634), (PMID:9573242) RGD PMID:9573242 PMID:23766293 PMID:24357634 NCBI chr 1:282,139,809...282,170,017
Ensembl chr 1:282,139,823...282,170,017
JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B involved_in ISO (PMID:9573242) RGD PMID:9573242 NCBI chr12:16,285,730...16,310,190
Ensembl chr12:16,285,733...16,310,190
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D involved_in ISO (PMID:9573242) RGD PMID:9573242 NCBI chr 7:119,188,189...119,200,578
Ensembl chr 7:119,188,185...119,200,623
JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F involved_in ISO (PMID:9573242) RGD PMID:9573242 NCBI chr 1:173,532,826...173,541,806
Ensembl chr 1:173,532,803...173,541,847
JBrowse link
G Mcts1 MCTS1, re-initiation and release factor involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr  X:124,894,269...124,906,129
Ensembl chr  X:124,894,466...124,906,162
JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 7:144,077,901...144,103,723
Ensembl chr 7:144,078,496...144,101,893
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO (PMID:17947529), (PMID:21518806) RGD PMID:17947529 PMID:21518806 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Ssb small RNA binding exonuclease protection factor La involved_in ISO (PMID:12384597) RGD PMID:12384597 NCBI chr 3:56,092,425...56,102,008
Ensembl chr 3:56,092,501...56,102,001
JBrowse link
late viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt2 cyclin T2 involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr13:44,475,959...44,516,892
Ensembl chr13:44,475,970...44,515,739
JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr19:45,938,433...45,946,647
Ensembl chr19:45,938,915...45,945,741
JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:2249772) RGD PMID:2249772 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27777077) RGD PMID:27777077 NCBI chr 6:127,327,959...127,334,430
Ensembl chr 6:127,327,959...127,334,428
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine-rich repeat protein 2 involved_in ISO (PMID:15893726) RGD PMID:15893726 NCBI chr 8:122,240,393...122,290,439
Ensembl chr 8:122,243,016...122,311,431
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO
IEA
(PMID:24514761)
GO_REF:0000107
RGD
Ensembl
PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:2194290), (PMID:8419915)
Ensembl
RGD
PMID:2194290 PMID:8419915 GO_REF:0000107 NCBI chr 3:79,876,938...79,882,319
Ensembl chr 3:79,876,938...79,882,319
JBrowse link
modulation by virus of host process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 involved_in ISO (PMID:16254364) RGD PMID:16254364 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Rraga Ras-related GTP binding A involved_in ISO
ISS
(PMID:8995684)
GO_REF:0000024
RGD
UniProt
PMID:8995684 GO_REF:0000024 NCBI chr 5:104,941,067...104,942,662
Ensembl chr 5:104,941,066...104,942,662
JBrowse link
G Rxra retinoid X receptor alpha involved_in IEA
ISO
GO_REF:0000107
(PMID:11915042)
Ensembl
RGD
PMID:11915042 GO_REF:0000107 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:1247599 RGD:2317429 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO
ISS
(PMID:16227268)
GO_REF:0000024
RGD
UniProt
PMID:16227268 GO_REF:0000024 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:11175319 RGD:2325644 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl12 chemokine (C-C motif) ligand 12 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:69,476,866...69,478,416
Ensembl chr10:69,476,775...69,478,462
JBrowse link
G Ccnk cyclin K involved_in ISO (PMID:21555514) RGD PMID:21555514 NCBI chr 6:132,090,235...132,113,560
Ensembl chr 6:132,090,218...132,113,557
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3053078 (MGI:55926|PMID:6327825) RGD PMID:6327825 MGI:55926 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:24380861) RGD PMID:24380861 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5700304|PMID:16601681)
UniProt
RGD
PMID:16601681 GO_REF:0000024 MGI:5700304 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:25244949) RGD PMID:25244949 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Vapa VAMP associated protein A involved_in ISO
IEA
(PMID:19515777)
GO_REF:0000107
RGD
Ensembl
PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:23355615) RGD PMID:23355615 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IEA
ISO
GO_REF:0000107
(PMID:23544079)
Ensembl
RGD
PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:3848729|PMID:19358828)
MGI:2180785 (MGI:2148352|PMID:11483763)
MGI:3053078 (MGI:1098064|PMID:9343248)
RGD PMID:9343248 PMID:11483763 PMID:19358828 MGI:1098064 MGI:2148352 MGI:3848729 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Crp C-reactive protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12522210) RGD PMID:12522210 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mptx1 mucosal pentraxin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,772,927...91,827,231
Ensembl chr13:91,773,004...91,776,397
JBrowse link
G Ptx3 pentraxin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:17690245) RGD PMID:17690245 NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISO
ISS
(PMID:10841574)
GO_REF:0000024
RGD
UniProt
PMID:10841574 GO_REF:0000024 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccl4 C-C motif chemokine ligand 4 involved_in ISO (PMID:10841574) RGD PMID:10841574 NCBI chr10:70,870,926...70,886,357
Ensembl chr10:70,884,531...70,886,355
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10841574) RGD PMID:10841574 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:16540471) RGD PMID:16540471 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS
(PMID:17005673)
GO_REF:0000024
RGD
UniProt
PMID:17005673 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) RGD PMID:18774950 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Pou2f3 POU class 2 homeobox 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:14645924)
Ensembl
RGD
PMID:14645924 GO_REF:0000107 NCBI chr 8:47,412,063...47,495,042
Ensembl chr 8:47,410,220...47,494,982
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
ISS
(PMID:17555596)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17555596 GO_REF:0000024 GO_REF:0000107 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:7745706) RGD PMID:7745706 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:14645924), (PMID:16540471) RGD PMID:14645924 PMID:16540471 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISO
ISS
(PMID:20484494)
GO_REF:0000024
RGD
UniProt
PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:15825084) RGD PMID:15825084 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO
ISS
(PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5437427|PMID:20686043), (MGI:5448513|PMID:21919738)
GO_REF:0000024
RGD
UniProt
PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353
JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in IBA
ISO
PMID:21873635
(PMID:18779051), (PMID:21835787)
RGD PMID:18779051 PMID:21835787, PMID:21873635 RGD:13792537 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS
(PMID:17005673)
GO_REF:0000024
RGD
UniProt
PMID:17005673 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) RGD PMID:18774950 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:29211708)
(MGI:6271895|PMID:29728365)
RGD PMID:29211708 PMID:29728365 MGI:6271895 NCBI chr14:83,889,138...83,930,263
Ensembl chr14:83,889,089...83,930,522
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO
ISS
(PMID:29211708)
GO_REF:0000024
RGD
UniProt
PMID:29211708 GO_REF:0000024 NCBI chr15:36,918,843...36,946,712
Ensembl chr15:36,918,843...36,946,708
JBrowse link
G Resf1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) RGD PMID:29728365 MGI:6271895 NCBI chr 4:183,879,177...183,905,807
Ensembl chr 4:183,896,303...183,905,297
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) RGD PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr 2:196,495,867...196,527,412
Ensembl chr 2:196,495,867...196,527,127
JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:29211708) RGD PMID:29211708 NCBI chr16:3,050,506...3,108,168
Ensembl chr16:3,051,449...3,105,531
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in
acts_upstream_of_or_within
ISO (MGI:5440670|PMID:20164836)
MGI:2143362 (MGI:3842857|PMID:19270682)
RGD PMID:19270682 PMID:20164836 MGI:3842857 MGI:5440670 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 involved_in ISO (PMID:12200142) RGD PMID:12200142 NCBI chr 7:126,096,793...126,176,468
Ensembl chr 7:126,096,793...126,176,468
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Apcs amyloid P component, serum involved_in IEA
ISO
GO_REF:0000107
(PMID:23544079)
Ensembl
RGD
PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608
JBrowse link
G Fcna ficolin A involved_in ISO (PMID:22851708) RGD PMID:22851708 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272
JBrowse link
G Fcnb ficolin B involved_in ISO (PMID:22851708) RGD PMID:22851708 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284
JBrowse link
G Gsn gelsolin involved_in ISO (PMID:23575248) RGD PMID:23575248 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5780029|PMID:25738301)
(MGI:5437420|PMID:21253575)
RGD PMID:21253575 PMID:25738301, PMID:21873635 MGI:5437420 MGI:5780029, RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in IBA
ISO
PMID:21873635
(PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656)
(MGI:5437420|PMID:21253575)
RGD PMID:21253575 PMID:23358889 PMID:26354436 PMID:33563656, PMID:21873635 MGI:5437420, RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in IBA
ISO
ISS
PMID:21873635
(PMID:20943977), (PMID:21253575), (PMID:23358889), (PMID:26354436)
GO_REF:0000024
(MGI:5437420|PMID:21253575)
RGD
UniProt
PMID:20943977 PMID:21253575 PMID:23358889 PMID:26354436, PMID:21873635 GO_REF:0000024 MGI:5437420, RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901
JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222
JBrowse link
G Ly6e lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)
RGD PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr 7:116,355,426...116,359,862
Ensembl chr 7:116,355,698...116,359,862
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IMP RGD PMID:22850678 RGD:8693392 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Nbn nibrin IMP RGD PMID:22850678 RGD:8693392 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
G Rad50 RAD50 double strand break repair protein IMP RGD PMID:22850678 RGD:8693392 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390
JBrowse link
G Trim10 tripartite motif-containing 10 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr20:2,182,945...2,191,640
Ensembl chr20:2,182,941...2,191,640
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145
JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IEA
(PMID:18248090)
GO_REF:0000107
RGD
Ensembl
PMID:18248090 GO_REF:0000107 NCBI chr20:2,201,685...2,224,481
Ensembl chr20:2,201,683...2,224,463
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996
G Trim59 tripartite motif-containing 59 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 2:165,629,903...165,641,751
Ensembl chr 2:165,629,918...165,641,573
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within ISO MGI:4941203 (MGI:4939544|PMID:21173229) RGD PMID:21173229 MGI:4939544 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (MGI:5486557|PMID:16378963) RGD PMID:16378963 MGI:5486557 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542
JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) RGD PMID:18005698 NCBI chr 1:220,744,195...220,746,224
Ensembl chr 1:220,744,195...220,746,224
JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
(PMID:20943977)
UniProt
RGD
PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 MGI:5437405 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in ISO
IEA
ISS
(PMID:19189853), (PMID:19840259)
GO_REF:0000107
(MGI:5487533|PMID:20038207)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19189853 PMID:19840259 PMID:20038207 GO_REF:0000024 GO_REF:0000107 MGI:5487533 NCBI chr 6:1,428,845...1,466,193
Ensembl chr 6:1,428,834...1,466,201
JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) RGD PMID:23093934 NCBI chr 1:229,003,778...229,019,532
Ensembl chr 1:229,003,961...229,019,527
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA
(PMID:21253575)
PMID:21873635
RGD PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO
IBA
(PMID:20943977), (PMID:21253575)
PMID:21873635
RGD PMID:20943977 PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901
JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222
JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:19008854) RGD PMID:19008854 NCBI chr 5:106,865,192...106,865,746
Ensembl chr 5:106,865,192...106,865,746
JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4867319|PMID:21123651)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21123651 GO_REF:0000024 GO_REF:0000107 MGI:4867319 NCBI chr 8:22,402,877...22,440,984
Ensembl chr 8:22,402,890...22,440,885
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in ISO (PMID:19357168) RGD PMID:19357168 NCBI chr 5:173,624,862...173,629,124
Ensembl chr 5:173,624,310...173,626,248
JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in IBA
ISO
PMID:21873635
(PMID:21036379)
RGD PMID:21036379, PMID:21873635 RGD:13792537 NCBI chr 1:140,602,553...140,608,892
Ensembl chr 1:140,601,791...140,608,946
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) RGD PMID:25193851 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:20451243)
(MGI:4881394|PMID:20451243)
RGD PMID:20451243 MGI:4881394 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567
JBrowse link
G Mx1 MX dynamin like GTPase 1 involved_in ISO (PMID:14687945), (PMID:15047845), (PMID:16202617) RGD PMID:14687945 PMID:15047845 PMID:16202617 NCBI chr11:37,891,150...37,916,775
Ensembl chr11:37,891,156...37,914,983
JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO
IEA
(PMID:24500530)
GO_REF:0000107
RGD
Ensembl
PMID:24500530 GO_REF:0000107 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950
JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in ISO
IEA
(PMID:31133753)
GO_REF:0000107
RGD
Ensembl
PMID:31133753 GO_REF:0000107 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964
JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in IBA
ISO
PMID:21873635
(PMID:19923450), (PMID:23196181)
(PMID:20844035)
(PMID:18931074)
RGD PMID:18931074 PMID:19923450 PMID:20844035 PMID:23196181, PMID:21873635 RGD:13792537 NCBI chr12:41,200,680...41,211,393
Ensembl chr12:41,200,718...41,211,909
JBrowse link
G Oas1b 2-5 oligoadenylate synthetase 1B involved_in IBA
ISS
PMID:21873635
GO_REF:0000024
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:41,255,762...41,266,430
Ensembl chr12:41,227,825...41,307,352
JBrowse link
G Oas1d 2'-5' oligoadenylate synthetase 1D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,179,477...41,188,796
Ensembl chr12:41,179,477...41,188,796
JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,281,479...41,290,500
Ensembl chr12:41,281,559...41,290,497
JBrowse link
G Oas1g 2'-5' oligoadenylate synthetase 1G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:42,343,103...42,355,139
Ensembl chr12:42,343,123...42,355,131
JBrowse link
G Oas1h 2 ' -5 ' oligoadenylate synthetase 1H involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,214,587...41,224,254
Ensembl chr12:41,214,587...41,224,254
JBrowse link
G Oas1i 2 ' -5 ' oligoadenylate synthetase 1I involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,155,489...41,167,501
Ensembl chr12:41,155,497...41,167,505
JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,341,417...41,363,124
Ensembl chr12:41,340,815...41,363,161
JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IBA
ISO
IEA
PMID:21873635
(PMID:19056102), (PMID:19923450), (PMID:23196181)
GO_REF:0000107
RGD
Ensembl
PMID:19056102 PMID:19923450 PMID:23196181, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:41,313,081...41,368,217
Ensembl chr12:41,316,764...41,336,562
JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like involved_in ISO
IBA
(PMID:18931074), (PMID:20074559)
PMID:21873635
RGD PMID:18931074 PMID:20074559, PMID:21873635 RGD:13792537 NCBI chr12:47,444,138...47,456,680
Ensembl chr12:47,444,104...47,456,894
JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:47,470,074...47,483,131
Ensembl chr12:47,469,598...47,482,961
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:22176891) RGD PMID:22176891 NCBI chr 7:117,291,592...117,300,878
Ensembl chr 7:117,291,877...117,300,662
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5284800|PMID:15308695)
GO_REF:0000024
(PMID:15308695)
Ensembl
RGD
UniProt
PMID:15308695 GO_REF:0000024 GO_REF:0000107 MGI:5284800 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G Rnasel ribonuclease L involved_in IBA
ISO
PMID:21873635
(PMID:19923450), (PMID:23196181)
RGD PMID:19923450 PMID:23196181, PMID:21873635 RGD:13792537 NCBI chr13:71,188,712...71,202,636
Ensembl chr13:71,192,142...71,202,625
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5431072|PMID:21880757)
(PMID:21957124)
Ensembl
RGD
PMID:21880757 PMID:21957124 GO_REF:0000107 MGI:5431072 NCBI chr 6:45,655,947...45,669,083
Ensembl chr 6:45,655,954...45,669,148
JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO
ISS
IEA
(PMID:26735137)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:26735137 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:21,890,214...21,896,045
Ensembl chr 8:21,890,319...21,896,031
JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (PMID:19333378) RGD PMID:19333378 NCBI chr 3:160,799,979...160,802,228
Ensembl chr 3:160,799,981...160,802,433
JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr20:5,829,412...5,865,877
Ensembl chr20:5,831,119...5,865,854
JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr 4:7,994,025...8,187,455
Ensembl chr 4:8,066,737...8,185,935
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218)
(MGI:5645191|PMID:24882218)
RGD PMID:24882218 MGI:5645191 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO
IEA
IDA
(PMID:21102435)
GO_REF:0000107
PMID:21876179
(PMID:21876179)
RGD
Ensembl
PMID:21102435 PMID:21876179, PMID:21876179 GO_REF:0000107, RGD:8554819 NCBI chr 4:66,012,111...66,062,160
Ensembl chr 4:66,011,915...66,062,089
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19207730), (PMID:22347431) RGD PMID:19207730 PMID:22347431 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443
JBrowse link
negative regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (PMID:18827027) RGD PMID:18827027 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542
JBrowse link
G Crebbp CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) RGD PMID:11583620 MGI:2151262 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) RGD PMID:25193851 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962
JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483) RGD PMID:16740483 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr15:41,897,191...41,936,545
Ensembl chr15:41,927,241...41,935,718
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145
JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IEA
(PMID:18248090)
GO_REF:0000107
RGD
Ensembl
PMID:18248090 GO_REF:0000107 NCBI chr20:2,201,685...2,224,481
Ensembl chr20:2,201,683...2,224,463
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
G Trim35 tripartite motif-containing 35 involved_in ISO
IEA
(PMID:18248090)
GO_REF:0000107
RGD
Ensembl
PMID:18248090 GO_REF:0000107 NCBI chr15:42,960,255...42,976,798
Ensembl chr15:42,960,307...42,976,792
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:18249148) RGD PMID:18249148 NCBI chr10:91,200,874...91,202,986
Ensembl chr10:91,200,874...91,202,984
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO (PMID:20943977) RGD PMID:20943977 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901
JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in IEA
ISO
GO_REF:0000107
(PMID:18249148), (PMID:18483487)
Ensembl
RGD
PMID:18249148 PMID:18483487 GO_REF:0000107 NCBI chr 2:231,866,888...231,882,002
Ensembl chr 2:231,867,135...231,881,939
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943
JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:16873258) RGD PMID:16873258 NCBI chr 9:92,675,103...92,718,489
Ensembl chr 9:92,681,078...92,717,929
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr15:41,897,191...41,936,545
Ensembl chr15:41,927,241...41,935,718
JBrowse link
G Trim14 tripartite motif-containing 14 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:62,128,941...62,154,424
Ensembl chr 5:62,128,941...62,153,786
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in IBA
ISO
PMID:21873635
(MGI:5545996|PMID:18248090)
(PMID:18248090)
RGD PMID:18248090, PMID:21873635 MGI:5545996, RGD:13792537 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631
JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694
JBrowse link
G Ubp1 upstream binding protein 1 involved_in ISO (PMID:8114710) RGD PMID:8114710 NCBI chr 8:122,196,576...122,241,368
Ensembl chr 8:122,197,027...122,240,357
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:14679154)
UniProt
Ensembl
RGD
PMID:14679154 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5552992|PMID:24550300)
RGD PMID:24550300, PMID:21873635 MGI:5552992, RGD:13792537 NCBI chr 9:94,879,876...94,915,231
Ensembl chr 9:94,879,745...94,915,228
JBrowse link
G Atg16l2 autophagy related 16-like 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5552992|PMID:24550300)
RGD PMID:24550300, PMID:21873635 MGI:5552992, RGD:13792537 NCBI chr 1:166,401,271...166,415,078
Ensembl chr 1:166,401,271...166,413,564
JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5552992|PMID:24550300)
Ensembl
RGD
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:5787727 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
G Vapa VAMP associated protein A involved_in ISO
IEA
(PMID:19515777)
GO_REF:0000107
RGD
Ensembl
PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
G Ythdc2 YTH domain containing 2 involved_in ISO (PMID:21559518) RGD PMID:21559518 NCBI chr 1:182,072,386...182,141,399
Ensembl chr 1:182,085,899...182,140,570
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(PMID:25122793)
Ensembl
RGD
PMID:25122793 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Cav2 caveolin 2 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3027072 (MGI:1098064|PMID:9343248)
MGI:2180785 (MGI:2148352|PMID:11483763)
RGD PMID:9343248 PMID:11483763 MGI:1098064 MGI:2148352 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cfl1 cofilin 1 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P01580 (MGI:4840165|PMID:20889566)
Ensembl
RGD
PMID:20889566 GO_REF:0000107 MGI:4840165 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Ifng interferon gamma involved_in ISO UniProtKB:P09581 (MGI:4840165|PMID:20889566) RGD PMID:20889566 MGI:4840165 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Igf2r insulin-like growth factor 2 receptor involved_in ISO (PMID:20889566) RGD PMID:20889566 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477
JBrowse link
G LOC100911237 zinc finger protein 420-like involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) RGD PMID:23861867 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO
IEA
(PMID:25556234)
GO_REF:0000107
RGD
Ensembl
PMID:25556234 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G LOC100911237 zinc finger protein 420-like involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase involved_in IEA
ISO
GO_REF:0000107
(PMID:23861867)
Ensembl
RGD
PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Vapa VAMP associated protein A involved_in IEA
ISO
GO_REF:0000107
(PMID:19515777)
Ensembl
RGD
PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 involved_in ISO (PMID:25297984) RGD PMID:25297984 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 involved_in ISO (PMID:15723517) RGD PMID:15723517 NCBI chr18:76,922,913...76,985,095
Ensembl chr18:76,922,934...76,984,203
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:16687403) RGD PMID:16687403 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in ISO (PMID:26748656) RGD PMID:26748656 NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889
JBrowse link
G Hpn hepsin involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:15614436)
UniProt
Ensembl
RGD
PMID:15614436 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO
IEA
(PMID:7657162)
GO_REF:0000107
RGD
Ensembl
PMID:7657162 GO_REF:0000107 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO (PMID:26311876) RGD PMID:26311876 NCBI chr20:10,844,234...10,869,830
Ensembl chr20:10,844,266...10,869,821
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO
IEA
(PMID:16687403)
GO_REF:0000107
RGD
Ensembl
PMID:16687403 GO_REF:0000107 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:16687403) RGD PMID:16687403 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:15905409), (PMID:19818711) RGD PMID:15905409 PMID:19818711 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Sp1 Sp1 transcription factor involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 involved_in ISO (PMID:9108034) RGD PMID:9108034 NCBI chr20:7,476,648...7,484,417
Ensembl chr20:7,476,651...7,482,747
JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
ISO
GO_REF:0000024
(PMID:20484494)
UniProt
RGD
PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563
JBrowse link
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IMP HIV-1 RGD PMID:19034668 RGD:4890424 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:24514761)
Ensembl
RGD
PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Top2a DNA topoisomerase II alpha involved_in IEA
ISO
GO_REF:0000107
(PMID:16712776)
Ensembl
RGD
PMID:16712776 GO_REF:0000107 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:16712776) RGD PMID:16712776 NCBI chr15:10,262,972...10,319,741
Ensembl chr15:10,262,651...10,320,233
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185 PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:17940959), (PMID:24878737) RGD PMID:17940959 PMID:24878737 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Cd4 Cd4 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849
JBrowse link
G Lgals1 galectin 1 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr 7:120,153,184...120,156,290
Ensembl chr 7:120,153,184...120,156,289
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190
JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) RGD PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr11:38,063,914...38,103,406
Ensembl chr11:38,063,915...38,103,290
JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in ISO (PMID:32404436) RGD PMID:32404436 NCBI chr 8:49,469,804...49,503,304
Ensembl chr 8:49,469,503...49,502,647
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714
JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:43,600,006...43,607,879 JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5447606|PMID:18362360)
GO_REF:0000107
(PMID:18362360), (PMID:19651874)
UniProt
RGD
Ensembl
PMID:18362360 PMID:19651874 GO_REF:0000024 GO_REF:0000107 MGI:5447606 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21289159)
UniProt
Ensembl
RGD
PMID:21289159 GO_REF:0000024 GO_REF:0000107 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:23386060) RGD PMID:23386060 NCBI chr16:54,899,452...54,918,616
Ensembl chr16:54,899,452...54,918,613
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:20862261) RGD PMID:20862261 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISO (PMID:26567527) RGD PMID:26567527 NCBI chr12:24,365,941...24,438,088
Ensembl chr12:24,367,199...24,438,019
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) RGD PMID:21191019 MGI:5693363 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:53,750,470...53,870,288
Ensembl chr13:53,750,473...53,870,428
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268
JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:15231837)
Ensembl
RGD
PMID:15231837 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253
JBrowse link
G Pkn2 protein kinase N2 involved_in IEA
ISO
GO_REF:0000107
(PMID:15364941)
Ensembl
RGD
PMID:15364941 GO_REF:0000107 NCBI chr 2:248,735,699...248,840,735
Ensembl chr 2:248,735,699...248,840,735
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO (PMID:22479552) RGD PMID:22479552 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443
JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 2:178,354,830...178,366,843
Ensembl chr 2:178,354,890...178,366,685
JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:140,822,141...140,835,244
Ensembl chr 5:140,822,141...140,834,959
JBrowse link
G Ppih peptidylprolyl isomerase H involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:138,343,934...138,361,743
Ensembl chr 5:138,352,916...138,361,702
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:20614012) RGD PMID:20614012 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391
JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr20:5,829,412...5,865,877
Ensembl chr20:5,831,119...5,865,854
JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr 4:7,994,025...8,187,455
Ensembl chr 4:8,066,737...8,185,935
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996
JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO
ISS
(PMID:11641396)
GO_REF:0000024
RGD
UniProt
PMID:11641396 GO_REF:0000024 NCBI chr 7:144,121,688...144,126,860
Ensembl chr 7:144,121,744...144,126,857
JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO (PMID:31849860) RGD PMID:31849860 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544
JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) RGD PMID:22539786 MGI:5441682 NCBI chr17:43,600,006...43,607,879 JBrowse link
G Vapb VAMP associated protein B and C involved_in ISS
ISO
GO_REF:0000024
(PMID:16227268)
UniProt
RGD
PMID:16227268 GO_REF:0000024 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Cd209 CD209 molecule involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:2,406,879...2,413,324
Ensembl chr12:2,406,879...2,413,324
JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:2,273,649...2,278,594
Ensembl chr12:2,273,941...2,277,169
JBrowse link
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111
JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA
ISO
GO_REF:0000107
(PMID:22673088)
Ensembl
RGD
PMID:22673088 GO_REF:0000107 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185), (PMID:16193069), (PMID:17940959) RGD PMID:11595185 PMID:16193069 PMID:17940959 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:16193069) RGD PMID:16193069 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
positive regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241
JBrowse link
G Tmem250 transmembrane protein 250 involved_in ISO (PMID:21667337) RGD PMID:21667337 NCBI chr 3:3,590,783...3,594,475
Ensembl chr 3:3,590,783...3,594,475
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA
ISO
GO_REF:0000107
(MGI:5619479|PMID:17940959)
Ensembl
RGD
PMID:17940959 GO_REF:0000107 MGI:5619479 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:17940959)
(MGI:5619479|PMID:17940959)
RGD PMID:17940959 MGI:5619479 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3|UniProtKB:Q9Y3E7 (PMID:14505570), (PMID:23051622) RGD PMID:14505570 PMID:23051622 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633|UniProtKB:Q9Y3E7 (PMID:23051622) RGD PMID:23051622 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO UniProtKB:O43633|UniProtKB:Q9UQN3 (PMID:14505570), (PMID:23051622) RGD PMID:14505570 PMID:23051622 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA
ISO
GO_REF:0000107
(PMID:14505570)
Ensembl
RGD
PMID:14505570 GO_REF:0000107 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185 PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) RGD PMID:11595185 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
positive regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11096080) RGD PMID:11096080 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 IDA from cytomegalovirus immediate-early promoter RGD PMID:11746500 RGD:2293493 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207
JBrowse link
G Mdfic MyoD family inhibitor domain containing involved_in ISO
IBA
(PMID:10671520)
PMID:21873635
RGD PMID:10671520, PMID:21873635 RGD:13792537 NCBI chr 4:42,202,546...42,282,499
Ensembl chr 4:42,202,838...42,282,496
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) RGD PMID:21191019 MGI:5693363 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Pfn1 profilin 1 IMP RGD PMID:12740026 RGD:2324854 NCBI chr10:57,273,003...57,275,708
Ensembl chr10:57,273,005...57,275,708
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:11788598) RGD PMID:11788598 NCBI chr 1:162,549,222...162,671,962
Ensembl chr 1:162,549,420...162,662,170
JBrowse link
positive regulation of viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:16680162) RGD PMID:16680162 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P51636 (PMID:21047970)
Ensembl
RGD
PMID:21047970 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cav2 caveolin 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O60840 (PMID:21047970)
Ensembl
RGD
PMID:21047970 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32221306), (PMID:32855215) RGD PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G LOC100294508 dyslexia susceptibility 2-like acts_upstream_of_or_within ISO MGI:5907241|MGI:5907242 (MGI:5750797|PMID:26814968) RGD PMID:26814968 MGI:5750797 NCBI chr 5:144,779,306...144,872,271
Ensembl chr 5:144,779,681...144,872,271
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877
JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:18343844), (PMID:32221306)
Ensembl
RGD
PMID:18343844 PMID:32221306 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO
ISS
(PMID:21501828)
GO_REF:0000024
RGD
UniProt
PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Grm1 glutamate metabotropic receptor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:4,753,141...5,165,859
Ensembl chr 1:4,753,144...5,165,859
JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:2538243) RGD PMID:2538243 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in IEA
ISO
GO_REF:0000107
(PMID:18385238)
Ensembl
RGD
PMID:18385238 GO_REF:0000107 NCBI chr11:74,040,846...74,052,179
Ensembl chr11:74,050,166...74,051,902
JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II involved_in ISO (PMID:22978549) RGD PMID:22978549 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,236,437...40,545,502
Ensembl chr20:40,236,437...40,545,494
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO
IBA
(PMID:11602758)
PMID:21873635
RGD PMID:11602758, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
G Trim14 tripartite motif-containing 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:62,128,941...62,154,424
Ensembl chr 5:62,128,941...62,153,786
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212
JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,492,786...169,514,195
Ensembl chr 1:169,491,920...169,513,537
JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,433,539...169,445,041
Ensembl chr 1:169,433,539...169,445,041
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896
JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242
JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,835,773...167,849,880
Ensembl chr 1:167,835,647...167,849,834
JBrowse link
G Triml1 tripartite motif family-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:52,169,426...52,177,548
Ensembl chr16:52,169,450...52,177,586
JBrowse link
G Triml2 tripartite motif family-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:52,116,975...52,127,591
Ensembl chr16:52,116,975...52,127,591
JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in IEA
ISO
GO_REF:0000107
(MGI:3700400|PMID:16950491)
Ensembl
RGD
PMID:16950491 GO_REF:0000107 MGI:3700400 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Ddx5 DEAD-box helicase 5 IMP RGD PMID:19224332 RGD:5128521 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3719397 (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr19:25,318,863...25,318,970
Ensembl chr19:25,318,863...25,318,970
JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr12:19,307,543...19,307,629
Ensembl chr12:19,307,543...19,307,629
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO
ISS
(PMID:11250896)
GO_REF:0000024
RGD
UniProt
PMID:11250896 GO_REF:0000024 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443
JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:22,706,906...22,707,648
Ensembl chr14:22,706,901...22,707,668
JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 acts_upstream_of_or_within ISO MGI:3809768 (MGI:54738|PMID:293683) RGD PMID:293683 MGI:54738 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:21810281) RGD PMID:21810281 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681
JBrowse link
regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IDA RGD PMID:9060691 RGD:11352687 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242
JBrowse link
G Tsg101 tumor susceptibility 101 NOT|involved_in ISO (PMID:11595185) RGD PMID:11595185 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO
ISS
(PMID:11641396)
GO_REF:0000024
RGD
UniProt
PMID:11641396 GO_REF:0000024 NCBI chr 7:144,121,688...144,126,860
Ensembl chr 7:144,121,744...144,126,857
JBrowse link
release from viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) RGD PMID:20091349 NCBI chr 5:59,063,532...59,068,196
Ensembl chr 5:59,063,531...59,068,188
JBrowse link
G Hcfc1 host cell factor C1 involved_in ISO (MGI:3687690|PMID:9990006) RGD PMID:9990006 MGI:3687690 NCBI chr  X:156,812,012...156,837,227
Ensembl chr  X:156,812,064...156,837,227
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death acts_upstream_of_or_within ISO MGI:2675966 (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISO (PMID:23290079) RGD PMID:23290079 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IEP RGD PMID:9630249 RGD:10045968 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
IEA
ISO
suppresses
GO_REF:0000107
(PMID:11296287)
Ensembl
RGD
PMID:11296287, PMID:12584308 GO_REF:0000107, RGD:633153 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Insr insulin receptor involved_in ISO
IEA
(PMID:17001305)
GO_REF:0000107
RGD
Ensembl
PMID:17001305 GO_REF:0000107 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Mmp9 matrix metallopeptidase 9 IDA RGD PMID:20000122 RGD:2325807 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:16256070 RGD:7207780 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:17701905) RGD PMID:17701905 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:15256501) RGD PMID:15256501 NCBI chr 3:11,970,401...12,009,463
Ensembl chr 3:11,972,813...12,007,570
JBrowse link
G Mvb12a multivesicular body subunit 12A involved_in IBA
ISO
PMID:21873635
(PMID:18005716)
RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr16:19,973,611...19,978,479
Ensembl chr16:19,973,636...19,978,478
JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in IBA
ISO
PMID:21873635
(PMID:18005716)
RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr 3:12,780,196...12,944,542
Ensembl chr 3:12,780,100...12,944,494
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of
involved_in
ISO
IEA
(PMID:15126635)
GO_REF:0000107
RGD
Ensembl
PMID:15126635 GO_REF:0000107 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) RGD PMID:18641129 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125
JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISS
ISO
GO_REF:0000024
(MGI:3850622|PMID:15256501)
(PMID:15126635), (PMID:18005716)
UniProt
RGD
PMID:15126635 PMID:15256501 PMID:18005716 GO_REF:0000024 MGI:3850622 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vta1 vesicle trafficking 1 involved_in ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 1:8,830,405...8,878,191
Ensembl chr 1:8,830,411...8,878,244
JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:62,923,620...62,926,150 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483), (PMID:23051622), (PMID:24878737) RGD PMID:16740483 PMID:23051622 PMID:24878737 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO UniProtKB:Q8WUM4|UniProtKB:Q9BY43 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:109,073,678...109,079,348
Ensembl chr10:109,073,678...109,079,348
JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) RGD PMID:23045692 NCBI chr 9:44,472,364...44,483,723
Ensembl chr 9:44,472,365...44,560,837
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO UniProtKB:Q9H444 (PMID:24107264) RGD PMID:24107264 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO UniProtKB:O75351 (PMID:24107264) RGD PMID:24107264 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO UniProtKB:Q9UN37 (PMID:24107264) RGD PMID:24107264 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
viral capsid secondary envelopment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) RGD PMID:19129479 NCBI chr19:41,968,692...41,990,843
Ensembl chr19:41,968,705...41,990,843
JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294), (PMID:33713620)
Ensembl
RGD
PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 PMID:33713620 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016
JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in ISO (PMID:33713620) RGD PMID:33713620 NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077
JBrowse link
G Avp arginine vasopressin involved_in IEA
ISO
GO_REF:0000107
(PMID:33713620)
Ensembl
RGD
PMID:33713620 GO_REF:0000107 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:33713620) RGD PMID:33713620 NCBI chr13:48,367,307...48,378,831
Ensembl chr13:48,367,307...48,378,831
JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G Cd209 CD209 molecule involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:2,406,879...2,413,324
Ensembl chr12:2,406,879...2,413,324
JBrowse link
G Cd300lf Cd300 molecule-like family member F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:103,669,781...103,690,584
Ensembl chr10:103,670,028...103,687,425
JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:47,125,156...47,153,557
Ensembl chr13:47,126,741...47,154,292
JBrowse link
G Cd81 Cd81 molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:216,237,663...216,253,460
Ensembl chr 1:216,237,697...216,253,311
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) RGD PMID:1719235 MGI:49235 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cldn1 claudin 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cldn6 claudin 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:12,999,256...13,002,860
Ensembl chr10:13,000,090...13,002,862
JBrowse link
G Cldn9 claudin 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:13,003,010...13,004,441
Ensembl chr10:13,003,011...13,004,441
JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:16051304), (PMID:24623090) RGD PMID:16051304 PMID:24623090 NCBI chr12:2,273,649...2,278,594
Ensembl chr12:2,273,941...2,277,169
JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:2,817,633...2,826,303
Ensembl chr12:2,816,065...2,826,378
JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:68,810,330...68,819,921
Ensembl chr 4:68,808,359...68,819,928
JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO
GO_REF:0000107
(MGI:5640952|PMID:15831716)
Ensembl
RGD
PMID:15831716 GO_REF:0000107 MGI:5640952 NCBI chr15:46,316,741...46,337,613
Ensembl chr15:46,316,741...46,337,612
JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) RGD PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Dag1 dystroglycan 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:48,291,055...48,372,672
Ensembl chr 3:48,291,055...48,372,672
JBrowse link
G Dppa1 developmental pluripotency associated 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,693,219...31,712,924
Ensembl chr10:31,693,219...31,712,924
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) RGD PMID:20202662 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:21501828)
UniProt
RGD
PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) RGD PMID:15650194 NCBI chr11:43,992,739...44,004,189
Ensembl chr11:44,001,579...44,003,664
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO
IEA
(PMID:23029581)
GO_REF:0000107
RGD
Ensembl
PMID:23029581 GO_REF:0000107 NCBI chr 1:219,536,220...219,544,329
Ensembl chr 1:219,536,220...219,544,328
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,813,819...31,860,934
Ensembl chr10:31,813,814...31,848,379
JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,332,834...116,337,522
Ensembl chr 8:116,332,796...116,335,435
JBrowse link
G Hyal2 hyaluronidase 2 IDA facilitates RGD PMID:12584308 RGD:633153 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Hyal3 hyaluronidase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,336,512...116,342,147
Ensembl chr 8:116,336,512...116,342,146
JBrowse link
G Itgav integrin subunit alpha V involved_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) RGD PMID:21810281 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681
JBrowse link
G LOC100359777 mCG12681-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,603,613...31,620,449
Ensembl chr10:31,603,613...31,620,443
JBrowse link
G LOC689968 similar to kidney injury molecule 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,647,519...31,661,204
Ensembl chr10:31,647,898...31,661,344
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:12584355 RGD:1599797 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G Nectin4 nectin cell adhesion molecule 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:89,755,665...89,774,185
Ensembl chr13:89,755,845...89,774,378
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)
RGD PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:33000221), (PMID:33082294) RGD PMID:33000221 PMID:33082294 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:80,820,306...80,835,712
Ensembl chr 1:80,820,050...80,835,701
JBrowse link
G Serpinb3 serpin family B member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:27,186,701...27,193,211
Ensembl chr13:27,187,130...27,192,592
JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) RGD PMID:12857889 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109
JBrowse link
G Siva1 SIVA1, apoptosis-inducing factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:137,209,999...137,214,379
Ensembl chr 6:137,210,052...137,214,388
JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:30341327)
Ensembl
RGD
PMID:30341327 GO_REF:0000107 NCBI chr 1:224,906,566...224,921,029
Ensembl chr 1:224,906,554...224,921,092
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:22573858) RGD PMID:22573858 NCBI chr 1:170,383,682...170,387,525
Ensembl chr 1:170,383,682...170,387,524
JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,755,473...31,796,423
Ensembl chr10:31,755,510...31,790,263
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142
JBrowse link
G Uvrag UV radiation resistance associated acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 1:163,844,804...164,101,568
Ensembl chr 1:163,844,818...164,101,578
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:100,250,301...100,252,756
Ensembl chr 4:100,250,301...100,252,755
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 3:122,947,887...122,969,543
Ensembl chr 3:122,947,913...122,969,541
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 3:111,097,352...111,108,206
Ensembl chr 3:111,097,326...111,108,295
JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:72,918,552...73,056,785
Ensembl chr13:72,918,490...73,056,875
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
ISO
GO_REF:0000024
(PMID:20484494)
UniProt
RGD
PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISO
IEA
(PMID:33157038)
(MGI:6508519|PMID:33157038)
GO_REF:0000107
RGD
Ensembl
PMID:33157038 GO_REF:0000107 MGI:6508519 NCBI chr 4:140,837,745...140,881,866
Ensembl chr 4:140,837,745...140,881,865
JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas6 growth arrest specific 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:21501828)
UniProt
RGD
PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:23029581)
Ensembl
RGD
PMID:23029581 GO_REF:0000107 NCBI chr 1:219,536,220...219,544,329
Ensembl chr 1:219,536,220...219,544,328
JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615
JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:22379090) RGD PMID:22379090 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA
(PMID:8940009)
GO_REF:0000107
RGD
Ensembl
PMID:8940009 GO_REF:0000107 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:8940009)
(MGI:3799615|PMID:8940009)
RGD PMID:8940009 MGI:3799615 NCBI chr 1:236,031,988...236,313,858
Ensembl chr 1:236,031,988...236,313,858
JBrowse link
viral protein processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spcs1 signal peptidase complex subunit 1 involved_in ISO (PMID:27383988) RGD PMID:27383988 NCBI chr16:7,080,389...7,081,957
Ensembl chr16:7,080,454...7,082,193
JBrowse link
G Spcs3 signal peptidase complex subunit 3 involved_in ISO (PMID:27383988) RGD PMID:27383988 NCBI chr16:40,050,862...40,056,296
Ensembl chr16:40,050,734...40,058,822
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) RGD PMID:19129479 NCBI chr19:41,968,692...41,990,843
Ensembl chr19:41,968,705...41,990,843
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069) RGD PMID:16193069 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:16193069) RGD PMID:16193069 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
viral replication complex formation and maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in IEA
ISO
GO_REF:0000107
(PMID:19376974)
Ensembl
RGD
PMID:19376974 GO_REF:0000107 NCBI chr11:87,858,323...87,975,549
Ensembl chr11:87,858,453...87,973,422
JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx6 DEAD-box helicase 6 involved_in ISO (PMID:22022269) RGD PMID:22022269 NCBI chr 8:48,924,768...48,961,394
Ensembl chr 8:48,925,604...48,958,026
JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Eea1 early endosome antigen 1 involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 7:37,101,415...37,186,534
Ensembl chr 7:37,018,459...37,186,732
JBrowse link
G Pcbp1 poly(rC) binding protein 1 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 4:118,327,185...118,329,223
Ensembl chr 4:118,327,533...118,328,602
JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 7:144,077,901...144,103,723
Ensembl chr 7:144,078,496...144,101,893
JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in IEA
ISO
GO_REF:0000107
(PMID:19376974)
Ensembl
RGD
PMID:19376974 GO_REF:0000107 NCBI chr11:87,858,323...87,975,549
Ensembl chr11:87,858,453...87,973,422
JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 4:173,732,196...174,102,502
Ensembl chr 4:173,732,248...174,102,496
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 9:5,910...6,065 JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO
IEA
(PMID:19376974)
GO_REF:0000107
RGD
Ensembl
PMID:19376974 GO_REF:0000107 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2b general transcription factor IIB involved_in ISO
ISS
IEA
(PMID:14644612), (PMID:24441171)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:14644612 PMID:24441171 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:248,709,433...248,727,741
Ensembl chr 2:248,715,281...248,727,741
JBrowse link
viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5700304|PMID:16601681)
UniProt
RGD
PMID:16601681 GO_REF:0000024 MGI:5700304 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
viral translational frameshifting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000107
(PMID:30682371)
UniProt
Ensembl
RGD
PMID:30682371, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 8:21,890,214...21,896,045
Ensembl chr 8:21,890,319...21,896,031
JBrowse link
viral translational termination-reinitiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif3a eukaryotic translation initiation factor 3, subunit A involved_in ISO (PMID:21347434) RGD PMID:21347434 NCBI chr 1:282,139,809...282,170,017
Ensembl chr 1:282,139,823...282,170,017
JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B involved_in ISO (PMID:21347434) RGD PMID:21347434 NCBI chr12:16,285,730...16,310,190
Ensembl chr12:16,285,733...16,310,190
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D involved_in ISO (PMID:21347434) RGD PMID:21347434 NCBI chr 7:119,188,189...119,200,578
Ensembl chr 7:119,188,185...119,200,623
JBrowse link
G Eif3g eukaryotic translation initiation factor 3, subunit G involved_in ISO (PMID:21347434) RGD PMID:21347434 NCBI chr 8:21,911,632...21,915,664
Ensembl chr 8:21,911,625...21,915,716
JBrowse link
G Eif3l eukaryotic translation initiation factor 3, subunit L involved_in ISO (PMID:21347434) RGD PMID:21347434 NCBI chr 7:120,320,547...120,331,596
Ensembl chr 7:120,320,547...120,331,595
JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO
IEA
(PMID:25122793)
GO_REF:0000107
RGD
Ensembl
PMID:25122793 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G LOC100363782 RAB1B, member RAS oncogene family-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 1:220,480,834...220,491,469 JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO UniProtKB:Q9H0U4 (PMID:21680502) RGD PMID:21680502 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Rab1b RAB1B, member RAS oncogene family involved_in
NOT|involved_in
ISO
IEA
UniProtKB:P62820 (PMID:21680502)
GO_REF:0000107
RGD
Ensembl
PMID:21680502 GO_REF:0000107 NCBI chr 1:220,483,529...220,491,469
Ensembl chr 1:220,480,834...220,491,469
JBrowse link
G Rab1b-ps1 RAB1B, member RAS oncogene family, pseudogene 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:220,480,828...220,491,456
Ensembl chr 1:220,480,834...220,491,469
JBrowse link
G Rab43 RAB43, member RAS oncogene family involved_in ISO (PMID:21680502) RGD PMID:21680502 NCBI chr 4:119,695,012...119,714,490
Ensembl chr 4:119,695,013...119,714,302
JBrowse link
G Spcs1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) RGD PMID:24009510 PMID:29593046 NCBI chr16:7,080,389...7,081,957
Ensembl chr16:7,080,454...7,082,193
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:21680502) RGD PMID:21680502 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
G Usp6nl USP6 N-terminal like involved_in ISO (PMID:21680502) RGD PMID:21680502 NCBI chr17:75,759,428...75,887,108
Ensembl chr17:75,761,469...75,886,523
JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:24098578) RGD PMID:24098578 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvb12a multivesicular body subunit 12A involved_in IBA
ISO
PMID:21873635
(PMID:18005716)
RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr16:19,973,611...19,978,479
Ensembl chr16:19,973,636...19,978,478
JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in ISO
IBA
(PMID:18005716)
PMID:21873635
RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr 3:12,780,196...12,944,542
Ensembl chr 3:12,780,100...12,944,494
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    viral process 349
      IRES-dependent viral translational initiation 11
      cap snatching 0
      establishment of viral latency + 1
      genome retention in viral capsid 0
      latency-replication decision 0
      latent virus replication + 3
      lysis of host organelle involved in viral entry into host cell + 0
      maintenance of viral latency 0
      modulation by virus of host process + 19
      negative regulation by host of viral process + 16
      negative regulation of viral process + 100
      permeabilization of host organelle membrane involved in viral entry into host cell + 0
      pore formation by virus in membrane of host cell 0
      positive regulation by host of viral process + 18
      positive regulation of viral process + 70
      recruitment of helicase-primase complex to DNA lesions 0
      regulation of defense response to virus by virus + 0
      regulation of viral process + 178
      release from viral latency + 3
      ribosomal skipping 0
      superinfection exclusion 0
      transport of virus + 15
      uncoating of virus 0
      viral DNA repair + 0
      viral RNA editing 0
      viral budding + 19
      viral capsid assembly + 0
      viral capsid secondary envelopment 1
      viral gene expression + 72
      viral genome circularization 0
      viral genome integration into host DNA 0
      viral genome maturation + 0
      viral genome packaging + 2
      viral genome replication + 121
      viral head-tail joining 0
      viral latency + 3
      viral life cycle + 265
      viral protein processing 2
      viral release from host cell + 35
      viral replication complex formation and maintenance 1
      viral scaffold assembly and maintenance 0
      viral tail assembly + 0
      viral transcription + 55
      viral translation + 16
      viral translational frameshifting 1
      viral translational termination-reinitiation 5
      viral tropism switching 0
      virion assembly + 30
      virion maturation 0
      virus baseplate assembly 0
      virus maturation + 2
      virus tail fiber assembly 0
paths to the root