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ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in symbiotic interaction
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Accession:GO:0044403 term browser browse the term
Definition:A process carried out by gene products in an organism that enable the organism to engage in a symbiotic relationship, a more or less intimate association, with another organism. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs. Microscopic symbionts are often referred to as endosymbionts.
Synonyms:narrow_synonym: commensalism;   parasitism
 related_synonym: host-pathogen interaction;   symbiosis;   symbiosis, encompassing mutualism through parasitism;   symbiotic interaction;   symbiotic interaction between host and organism;   symbiotic interaction between organisms;   symbiotic interaction between species;   symbiotic process
 alt_id: GO:0043298;   GO:0044404;   GO:0072519;   GO:0085031



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adhesion of symbiont to host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbp1 guanylate binding protein 1 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr 2:231,398,136...231,432,773
Ensembl chr 2:231,398,163...231,432,131
Ensembl chr 2:231,398,163...231,432,131
JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4412460|PMID:18025219)
Ensembl
RGD
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 2:231,332,488...231,348,573
Ensembl chr 2:231,332,284...231,348,571
JBrowse link
G Gbp4 guanylate binding protein 4 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr 2:231,304,910...231,318,883
Ensembl chr 2:231,305,244...231,318,879
JBrowse link
G Gbp6 guanylate binding protein family member 6 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr14:4,730,286...4,756,508
Ensembl chr14:4,730,453...4,839,062
Ensembl chr14:4,730,453...4,839,062
JBrowse link
G Gbp7 guanylate binding protein 7 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr 2:231,275,521...231,297,289
Ensembl chr 2:231,275,640...231,297,278
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 NOT|involved_in ISO (MGI:5882877|PMID:20633027) RGD PMID:20633027 MGI:5882877 NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
biological process involved in interaction with host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2670590 (MGI:5297102|PMID:20709292)
Ensembl
RGD
PMID:20709292 GO_REF:0000107 MGI:5297102 NCBI chr 1:78,531,815...78,537,001
Ensembl chr 1:78,531,815...78,537,001
JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO MGI:5297105 (MGI:5297102|PMID:20709292) RGD PMID:20709292 MGI:5297102 NCBI chr 7:11,418,674...11,432,162
Ensembl chr 7:11,418,880...11,427,773
JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 acts_upstream_of_or_within ISO MGI:5297106 (MGI:5297102|PMID:20709292) RGD PMID:20709292 MGI:5297102 NCBI chr 2:177,479,693...177,490,769
Ensembl chr 2:177,477,407...177,490,736
Ensembl chr 2:177,477,407...177,490,736
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO MGI:5297107 (MGI:5297102|PMID:20709292) RGD PMID:20709292 MGI:5297102 NCBI chr 2:176,202,654...176,322,859
Ensembl chr 2:176,218,519...176,242,251
JBrowse link
biological process involved in interaction with symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cysrt1 cysteine rich tail 1 involved_in ISO (PMID:36804407) RGD PMID:36804407 NCBI chr 3:8,054,195...8,057,846
Ensembl chr 3:8,053,482...8,059,721
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
JBrowse link
G Fn1 fibronectin 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104887|MGI:106609 (MGI:3608474|PMID:12751789)
Ensembl
RGD
PMID:12751789 GO_REF:0000107 MGI:3608474 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Gpx2 glutathione peroxidase 2 acts_upstream_of_or_within ISO MGI:104887|MGI:106609 (MGI:3608474|PMID:12751789) RGD PMID:12751789 MGI:3608474 NCBI chr 6:95,493,589...95,496,877
Ensembl chr 6:95,493,589...95,496,877
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO
IBA
(PMID:12857889)
GO_REF:0000033
RGD
GO_Central
PMID:12857889 GO_REF:0000033 NCBI chr 3:118,287,988...118,307,125
Ensembl chr 3:118,287,988...118,306,850
JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:79,561,294...79,576,700
Ensembl chr 1:79,546,879...79,576,715
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Cfhr1 complement factor H-related 1 involved_in ISO (PMID:23487775) RGD PMID:23487775 NCBI chr13:51,395,583...51,410,571
Ensembl chr13:51,369,211...51,410,592
JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:144,659,709...144,661,310
Ensembl chr 3:144,659,826...144,661,310
JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jpt2 Jupiter microtubule associated homolog 2 involved_in ISO (PMID:15094197) RGD PMID:15094197 NCBI chr10:13,963,135...13,983,212
Ensembl chr10:13,963,137...13,983,170
JBrowse link
G Tpcn1 two pore segment channel 1 involved_in ISO
IEA
(PMID:25722412)
GO_REF:0000107
(MGI:6716961|PMID:25722412)
RGD
Ensembl
PMID:25722412 GO_REF:0000107 MGI:6716961 NCBI chr12:35,972,813...36,029,632
Ensembl chr12:35,972,846...36,029,626
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO
IBA
(PMID:25722412)
GO_REF:0000033
(MGI:6716961|PMID:25722412)
RGD
GO_Central
PMID:25722412 GO_REF:0000033 MGI:6716961 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
entry receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:36228039), (PMID:36735681), (PMID:36757924)
Ensembl
RGD
PMID:36228039 PMID:36735681 PMID:36757924 GO_REF:0000107 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card9 caspase recruitment domain family, member 9 involved_in ISO
ISS
(PMID:33548172)
GO_REF:0000024
(MGI:5829544|PMID:27158904), (MGI:6508474|PMID:33548172), (MGI:6694416|PMID:23732773)
RGD
UniProt
PMID:23732773 PMID:27158904 PMID:33548172 GO_REF:0000024 MGI:5829544 MGI:6508474 MGI:6694416 NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3526790|PMID:15653504), (MGI:6110065|PMID:29326275)
UniProt
RGD
PMID:15653504 PMID:29326275 GO_REF:0000024 MGI:3526790 MGI:6110065 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Lrrc19 leucine rich repeat containing 19 involved_in ISO (MGI:6204559|PMID:26776522) RGD PMID:26776522 MGI:6204559 NCBI chr 5:109,494,891...109,507,948
Ensembl chr 5:109,497,121...109,507,938
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming involved_in ISS
ISO
GO_REF:0000024
(MGI:6471838|PMID:33093110)
UniProt
RGD
PMID:33093110 GO_REF:0000024 MGI:6471838 NCBI chr 1:196,799,494...196,831,740
Ensembl chr 1:196,799,517...196,831,756
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in ISS
ISO
GO_REF:0000024
(MGI:5641800|PMID:25757720)
UniProt
RGD
PMID:25757720 GO_REF:0000024 MGI:5641800 NCBI chr 4:13,360,532...13,398,815
Ensembl chr 4:13,361,006...13,398,748
JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 involved_in
NOT|involved_in
ISO
IEA
(MGI:5704237|PMID:26638072)
GO_REF:0000107
(MGI:6113790|PMID:28801232), (MGI:6844606|PMID:29281815)
RGD
Ensembl
PMID:26638072 PMID:28801232 PMID:29281815 GO_REF:0000107 MGI:5704237 MGI:6113790 MGI:6844606 NCBI chr 1:196,004,854...196,011,615
Ensembl chr 1:196,004,953...196,011,113
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (MGI:5473781|PMID:21421666), (MGI:5473945|PMID:23281400), (MGI:5529546|PMID:24062413), (MGI:5788640|PMID:25088769), (MGI:7484281|PMID:28127403) RGD PMID:21421666 PMID:23281400 PMID:24062413 PMID:25088769 PMID:28127403 MGI:5473781 MGI:5473945 MGI:5529546 MGI:5788640 MGI:7484281 NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G St6galnac1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 involved_in ISO (MGI:7259978|PMID:35303419) RGD PMID:35303419 MGI:7259978 NCBI chr10:101,972,656...101,983,053
Ensembl chr10:101,972,668...101,983,053
JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISO
IEA
(PMID:18647839)
GO_REF:0000107
RGD
Ensembl
PMID:18647839 GO_REF:0000107 NCBI chr 1:46,887,017...46,893,956
Ensembl chr 1:46,887,017...46,893,881
JBrowse link
killing by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide acts_upstream_of_or_within
involved_in
ISO MGI:2182791 (MGI:3611523|PMID:16177355)
(PMID:16177355)
(PMID:16020269)
RGD PMID:16020269 PMID:16177355 MGI:3611523 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Dao D-amino-acid oxidase involved_in ISO (MGI:6880742|PMID:27670111) RGD PMID:27670111 MGI:6880742 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
G Defa5 defensin alpha 5 involved_in ISO (PMID:9169780) RGD PMID:9169780 NCBI chr16:70,342,530...70,344,854
Ensembl chr16:70,342,530...70,344,836
JBrowse link
G Defb14 defensin beta 14 involved_in ISO (PMID:16436752) RGD PMID:16436752 NCBI chr16:70,663,443...70,668,473
Ensembl chr16:70,663,333...70,666,540
JBrowse link
G Mbl1 mannose binding lectin 1 acts_upstream_of_or_within ISO MGI:96924 (MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:3577322 NCBI chr16:17,029,146...17,035,187
Ensembl chr16:17,029,118...17,035,174
JBrowse link
G Mbl2 mannose binding lectin 2 acts_upstream_of_or_within ISO MGI:96923 (MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:3577322 NCBI chr 1:228,016,439...228,024,736 JBrowse link
modulation by host of symbiont process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St6galnac1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 involved_in ISO (MGI:7259978|PMID:35303419) RGD PMID:35303419 MGI:7259978 NCBI chr10:101,972,656...101,983,053
Ensembl chr10:101,972,668...101,983,053
JBrowse link
modulation by host of symbiont transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sap30 Sin3A associated protein 30 involved_in ISO (PMID:21221920) RGD PMID:21221920 NCBI chr16:32,747,777...32,753,114
Ensembl chr16:32,747,734...32,753,112
JBrowse link
G Sap30bp SAP30 binding protein involved_in ISO (PMID:21221920) RGD PMID:21221920 NCBI chr10:101,165,777...101,198,503
Ensembl chr10:101,165,856...101,198,502
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27777077) RGD PMID:27777077 NCBI chr 6:122,590,461...122,596,996
Ensembl chr 6:122,590,472...122,779,294
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Eea1 early endosome antigen 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:30,554,686...30,722,186
Ensembl chr 7:30,554,552...30,718,487
JBrowse link
G Fasn fatty acid synthase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:5787727 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO
IEA
(PMID:19376974)
GO_REF:0000107
RGD
Ensembl
PMID:19376974 GO_REF:0000107 NCBI chr11:83,609,148...83,726,876
Ensembl chr11:83,609,069...83,724,080
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:43,307,757...43,313,420
Ensembl chr13:43,307,775...43,313,417
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx56 DEAD-box helicase 56 acts_upstream_of_negative_effect ISO (PMID:33109765) RGD PMID:33109765 NCBI chr14:81,112,008...81,122,331
Ensembl chr14:81,112,012...81,122,333
JBrowse link
G Fbxl2 F-box and leucine-rich repeat protein 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:113,916,660...113,965,137
Ensembl chr 8:113,913,373...113,965,066
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:24514761) RGD PMID:24514761 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:25106914) RGD PMID:25106914 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
JBrowse link
G Tmem41b transmembrane protein 41B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:164,012,585...164,026,967
Ensembl chr 1:164,012,592...164,026,933
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in ISO
IEA
(PMID:2194290), (PMID:8419915)
GO_REF:0000107
RGD
Ensembl
PMID:2194290 PMID:8419915 GO_REF:0000107 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358
JBrowse link
modulation by virus of host process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyms thymidylate synthetase IEP RGD PMID:1247599 RGD:2317429 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
JBrowse link
negative regulation by host of symbiont catalytic activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab9a RAB9A, member RAS oncogene family involved_in ISO (PMID:18787122) RGD PMID:18787122 NCBI chr  X:27,955,552...28,009,870
Ensembl chr  X:27,952,204...28,001,622
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:85,373,219...85,374,195
Ensembl chr13:85,373,220...85,374,298
JBrowse link
G Ptx3 pentraxin 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (PMID:18827027) RGD PMID:18827027 NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922
JBrowse link
G Ccl12 C-C motif chemokine ligand 12 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:67,070,230...67,071,780
Ensembl chr10:67,070,230...67,071,780
JBrowse link
G Ccnk cyclin K involved_in ISO (PMID:21555514) RGD PMID:21555514 NCBI chr 6:127,090,115...127,113,195
Ensembl chr 6:127,090,569...127,113,191
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3053078 (MGI:55926|PMID:6327825) RGD PMID:6327825 MGI:55926 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:24380861) RGD PMID:24380861 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5700304|PMID:16601681)
UniProt
RGD
PMID:16601681 GO_REF:0000024 MGI:5700304 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA
(PMID:25244949)
GO_REF:0000107
RGD
Ensembl
PMID:25244949 GO_REF:0000107 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO (PMID:28095508) RGD PMID:28095508 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096
JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in ISO (PMID:28095508) RGD PMID:28095508 NCBI chr 6:33,978,730...34,033,201
Ensembl chr 6:33,978,716...34,031,746
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:23355615) RGD PMID:23355615 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:85,373,219...85,374,195
Ensembl chr13:85,373,220...85,374,298
JBrowse link
G Ptx3 pentraxin 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:3848729|PMID:19358828)
MGI:2180785 (MGI:2148352|PMID:11483763)
MGI:3053078 (MGI:1098064|PMID:9343248)
RGD PMID:9343248 PMID:11483763 PMID:19358828 MGI:1098064 MGI:2148352 MGI:3848729 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12522210) RGD PMID:12522210 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Ptx3 pentraxin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:17690245) RGD PMID:17690245 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS
(PMID:17005673)
GO_REF:0000024
RGD
UniProt
PMID:17005673 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:60,474,262...60,495,813
Ensembl chr10:60,475,897...60,496,773
JBrowse link
G Pou2f3 POU class 2 homeobox 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:43,495,408...43,577,795
Ensembl chr 8:43,495,527...43,577,795
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:7745706) RGD PMID:7745706 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tfap4 transcription factor AP-4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:115,292,431...115,305,798
Ensembl chr 2:115,292,516...115,303,628
JBrowse link
negative regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgav integrin subunit alpha V involved_in ISO (PMID:10570297) RGD PMID:10570297 NCBI chr 3:68,838,514...68,926,653
Ensembl chr 3:68,838,189...68,926,639
JBrowse link
negative regulation of fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ch25h cholesterol 25-hydroxylase involved_in ISO
ISS
(PMID:32944968), (PMID:33239446)
GO_REF:0000024
RGD
UniProt
PMID:32944968 PMID:33239446 GO_REF:0000024 NCBI chr 1:232,014,877...232,016,195
Ensembl chr 1:232,014,880...232,016,195
JBrowse link
negative regulation of single-species biofilm formation in or on host organism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpifa1 BPI fold containing family A, member 1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(MGI:5484728|PMID:23499554)
(PMID:23499554)
UniProt
GO_Central
RGD
PMID:23499554 GO_REF:0000024 GO_REF:0000033 MGI:5484728 NCBI chr 3:142,627,810...142,633,553
Ensembl chr 3:142,627,810...142,633,552
JBrowse link
G Bpifa5 BPI fold containing family A, member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:142,646,103...142,652,884
Ensembl chr 3:142,646,103...142,652,883
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12037568) RGD PMID:12037568 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IEA
ISO
GO_REF:0000107
(PMID:23544079)
Ensembl
RGD
PMID:23544079 GO_REF:0000107 NCBI chr13:85,373,219...85,374,195
Ensembl chr13:85,373,220...85,374,298
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr10:5,139,947...5,187,493
Ensembl chr10:5,140,178...5,187,440
JBrowse link
G ENSRNOG00000068074 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:59,549,152...59,549,829 JBrowse link
G ENSRNOG00000070481 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:30,960,845...30,961,834 JBrowse link
G Fcnb ficolin B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:11,393,713...11,402,198
Ensembl chr 3:11,393,739...11,402,151
JBrowse link
G Gsn gelsolin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(MGI:5437420|PMID:21253575)
GO_REF:0000033
(PMID:21253575), (PMID:23358889), (PMID:26354436)
(MGI:5780029|PMID:25738301)
RGD
GO_Central
PMID:21253575 PMID:23358889 PMID:25738301 PMID:26354436 GO_REF:0000033 MGI:5437420 MGI:5780029 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA
(MGI:5437420|PMID:21253575)
GO_REF:0000033
(PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656)
RGD
GO_Central
PMID:21253575 PMID:23358889 PMID:26354436 PMID:33563656 GO_REF:0000033 MGI:5437420 NCBI chr 1:196,051,539...196,052,719
Ensembl chr 1:196,051,537...196,052,741
JBrowse link
G Ifitm2-ps2 interferon induced transmembrane protein 2, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:68,187,131...68,187,808
Ensembl chr13:68,187,366...68,187,854
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO
IBA
ISS
(MGI:5437420|PMID:21253575)
GO_REF:0000033
(PMID:20943977), (PMID:21253575), (PMID:23358889), (PMID:26354436)
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:20943977 PMID:21253575 PMID:23358889 PMID:26354436 GO_REF:0000024 GO_REF:0000033 MGI:5437420 NCBI chr 1:196,111,026...196,112,135
Ensembl chr 1:196,111,043...196,112,203
JBrowse link
G Ifitm3-ps1 interferon induced transmembrane protein3, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:61,233,269...61,233,688
Ensembl chr14:61,233,269...61,233,688
JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,117,043...196,118,315
Ensembl chr 1:196,117,049...196,118,386
JBrowse link
G Ifitm7 interferon induced transmembrane protein 7 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr11:33,137,146...33,137,562
Ensembl chr11:33,137,146...33,138,061
JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in ISO
IEA
(PMID:36228039), (PMID:36757924)
GO_REF:0000107
RGD
Ensembl
PMID:36228039 PMID:36757924 GO_REF:0000107 NCBI chr11:70,469,817...70,484,268
Ensembl chr11:70,469,804...70,484,267
JBrowse link
G Ly6e lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)
RGD PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:104,354,692...104,456,757
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IMP RGD PMID:22850678 RGD:8693392 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Nbn nibrin IMP RGD PMID:22850678 RGD:8693392 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
G Rad50 RAD50 double strand break repair protein IMP RGD PMID:22850678 RGD:8693392 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:45,992,446...46,025,361
Ensembl chr20:45,992,720...46,025,379
JBrowse link
G Trim10 tripartite motif-containing 10 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr20:1,689,554...1,698,948
Ensembl chr20:1,689,562...1,698,252
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr10:43,758,299...43,771,138
Ensembl chr10:43,758,354...43,771,138
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IEA
IBA
(PMID:18248090)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
RGD
TreeGrafter
GO_Central
Ensembl
PMID:18248090 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:1,708,297...1,731,176
Ensembl chr20:1,709,788...1,731,120
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
(MGI:5545996|PMID:18248090)
RGD
GO_Central
PMID:18248090 GO_REF:0000033 MGI:5545996 NCBI chr20:1,653,165...1,666,494
Ensembl chr20:1,653,165...1,666,494
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr12:19,544,913...19,567,324
Ensembl chr12:19,551,521...19,567,462
JBrowse link
G Trim59 tripartite motif-containing 59 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 2:153,269,210...153,281,185
Ensembl chr 2:153,268,584...153,281,031
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513
JBrowse link
neutrophil-mediated killing of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:104696 (MGI:6478086|PMID:22419116) RGD PMID:22419116 MGI:6478086 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108005 (MGI:6478086|PMID:22419116)
Ensembl
RGD
PMID:22419116 GO_REF:0000107 MGI:6478086 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451
JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed acts_upstream_of_or_within ISO MGI:2182177 (MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:4353632 NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO MGI:3576788 (MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:4353632 NCBI chr12:22,485,382...22,494,647
Ensembl chr12:22,485,451...22,494,646
JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISS
ISO
GO_REF:0000024
(MGI:7581102|PMID:25425233)
(PMID:25425233)
UniProt
RGD
PMID:25425233 GO_REF:0000024 MGI:7581102 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
G Elane elastase, neutrophil expressed involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100
JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1930003 (MGI:5471912|PMID:23241959)
GO_REF:0000033
RGD
GO_Central
PMID:23241959 GO_REF:0000033 MGI:5471912 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:12,749,821...12,762,547
Ensembl chr 9:12,749,852...12,760,779
JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO MGI:3706236 (MGI:5518492|PMID:24042119) RGD PMID:24042119 MGI:5518492 NCBI chr 8:108,236,838...108,240,056
Ensembl chr 8:108,236,838...108,240,056
JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G acts_upstream_of_or_within ISO MGI:2182170 (MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:4353632 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO MGI:3576788 (MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:4353632 NCBI chr12:22,485,382...22,494,647
Ensembl chr12:22,485,451...22,494,646
JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6453663|PMID:30248149)
GO_REF:0000107
RGD
Ensembl
PMID:30248149 GO_REF:0000107 MGI:6453663 NCBI chr 1:196,004,854...196,011,615
Ensembl chr 1:196,004,953...196,011,113
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO
IEA
(MGI:5787727|PMID:26581985)
GO_REF:0000107
RGD
Ensembl
PMID:26581985 GO_REF:0000107 MGI:5787727 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:66,603,877...66,609,734
Ensembl chr 8:66,603,861...66,630,428
JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:5616479 NCBI chr 3:18,645,058...18,667,343
Ensembl chr 3:18,644,378...18,667,354
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763
JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 involved_in ISO (PMID:21559518) RGD PMID:21559518 NCBI chr18:37,266,559...37,331,681
Ensembl chr18:37,265,836...37,331,023
JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in ISO (PMID:35551511) RGD PMID:35551511 NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(PMID:25122793)
Ensembl
RGD
PMID:25122793 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Cav2 caveolin 2 involved_in ISO
IEA
(PMID:25556234)
GO_REF:0000107
RGD
Ensembl
PMID:25556234 GO_REF:0000107 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3027072 (MGI:1098064|PMID:9343248)
MGI:2180785 (MGI:2148352|PMID:11483763)
RGD PMID:9343248 PMID:11483763 MGI:1098064 MGI:2148352 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Cfl1 cofilin 1 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P01580 (MGI:4840165|PMID:20889566)
Ensembl
RGD
PMID:20889566 GO_REF:0000107 MGI:4840165 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Ifng interferon gamma involved_in ISO UniProtKB:P09581 (MGI:4840165|PMID:20889566) RGD PMID:20889566 MGI:4840165 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Igf2r insulin-like growth factor 2 receptor involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:47,979,109...48,067,501
Ensembl chr 1:47,979,109...48,067,501
JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:66,603,877...66,609,734
Ensembl chr 8:66,603,861...66,630,428
JBrowse link
G Zdhhc20 zinc finger DHHC-type palmitoyltransferase 20 involved_in ISO (PMID:34599882) RGD PMID:34599882 NCBI chr15:31,980,057...32,039,006
Ensembl chr15:31,983,155...32,038,989
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:82,755,110...82,769,280
Ensembl chr11:82,755,143...82,767,734
JBrowse link
G Zdhhc9 zinc finger DHHC-type palmitoyltransferase 9 involved_in ISO (PMID:34599882) RGD PMID:34599882 NCBI chr  X:127,352,340...127,388,245
Ensembl chr  X:127,352,345...127,388,245
JBrowse link
G Zfp502 zinc finger protein 502 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:28,884,390...28,908,726 JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt1 cyclin T1 involved_in ISO (PMID:10866664) RGD PMID:10866664 NCBI chr 7:129,687,146...129,718,080
Ensembl chr 7:129,691,209...129,717,871
JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in ISO
IEA
(PMID:10866664)
GO_REF:0000107
RGD
Ensembl
PMID:10866664 GO_REF:0000107 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 involved_in ISO (PMID:25297984) RGD PMID:25297984 NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 involved_in ISO (PMID:15723517) RGD PMID:15723517 NCBI chr18:73,854,277...73,916,232
Ensembl chr18:73,854,282...73,916,457
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:16687403) RGD PMID:16687403 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Hpn hepsin involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:10,123,111...10,148,704
Ensembl chr20:10,123,125...10,147,928
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO
IEA
(PMID:16687403)
GO_REF:0000107
RGD
Ensembl
PMID:16687403 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:16687403) RGD PMID:16687403 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:15905409), (PMID:19818711) RGD PMID:15905409 PMID:19818711 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Sp1 Sp1 transcription factor involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 involved_in ISO (PMID:9108034) RGD PMID:9108034 NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905
JBrowse link
G Tfap4 transcription factor AP-4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:115,292,431...115,305,798
Ensembl chr 2:115,292,516...115,303,628
JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO
IEA
(PMID:15546957)
GO_REF:0000107
RGD
Ensembl
PMID:15546957 GO_REF:0000107 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5586806|PMID:10725737)
Ensembl
RGD
PMID:10725737 GO_REF:0000107 MGI:5586806 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215
JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10670585) RGD PMID:10670585 NCBI chr 6:26,939,844...26,945,666
Ensembl chr 6:26,939,837...26,945,664
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
JBrowse link
G Cd4 Cd4 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr 4:157,668,878...157,695,366 JBrowse link
G Cd74 CD74 molecule involved_in ISO
IEA
(PMID:24942581)
GO_REF:0000107
RGD
Ensembl
PMID:24942581 GO_REF:0000107 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314
JBrowse link
G Lgals1 galectin 1 involved_in ISO
IEA
(PMID:21670307)
GO_REF:0000107
RGD
Ensembl
PMID:21670307 GO_REF:0000107 NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:36,934,306...36,973,779
Ensembl chr11:36,934,306...36,973,715
JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:45,475,819...45,508,409
Ensembl chr 8:45,476,053...45,508,409
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:5545996 NCBI chr10:43,758,299...43,771,138
Ensembl chr10:43,758,354...43,771,138
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:41,351,857...41,365,021 JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO
IEA
UniProtKB:P51636 (PMID:21047970)
GO_REF:0000107
RGD
Ensembl
PMID:21047970 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cav2 caveolin 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O60840 (PMID:21047970)
Ensembl
RGD
PMID:21047970 GO_REF:0000107 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32855215) RGD PMID:16081529 PMID:32855215 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G KIAA0319l KIAA0319 like acts_upstream_of_or_within ISO MGI:5907241|MGI:5907242 (MGI:5750797|PMID:26814968) RGD PMID:26814968 MGI:5750797 NCBI chr 5:139,047,847...139,140,709
Ensembl chr 5:139,046,143...139,140,715
JBrowse link
G Rnasek ribonuclease K involved_in ISO (PMID:26212330) RGD PMID:26212330 NCBI chr10:54,954,904...54,956,622
Ensembl chr10:54,951,991...54,956,601
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO (PMID:18343844) RGD PMID:18343844 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977
JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in ISO (PMID:15479853), (PMID:32766577) RGD PMID:15479853 PMID:32766577 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in IEA
ISO
GO_REF:0000107
(PMID:36228039), (PMID:36735681), (PMID:36757924)
Ensembl
RGD
PMID:36228039 PMID:36735681 PMID:36757924 GO_REF:0000107 NCBI chr11:70,469,817...70,484,268
Ensembl chr11:70,469,804...70,484,267
JBrowse link
G Ttc6 tetratricopeptide repeat domain 6 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:75,136,827...75,368,176
Ensembl chr 6:75,136,792...75,368,178
JBrowse link
regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:24625804)
GO_REF:0000107
RGD
Ensembl
PMID:24625804 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Exoc2 exocyst complex component 2 involved_in ISO
IEA
(PMID:20579884)
GO_REF:0000107
RGD
Ensembl
PMID:20579884 GO_REF:0000107 NCBI chr17:33,506,289...33,698,246
Ensembl chr17:33,506,338...33,693,289
JBrowse link
G Exoc7 exocyst complex component 7 involved_in ISO
IEA
(PMID:20579884)
GO_REF:0000107
RGD
Ensembl
PMID:20579884 GO_REF:0000107 NCBI chr10:101,521,630...101,540,425
Ensembl chr10:101,520,927...101,540,561
JBrowse link
G Fuca2 alpha-L-fucosidase 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:7,885,986...7,900,777
Ensembl chr 1:7,885,918...7,900,776
JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl6 C-X-C motif chemokine ligand 6 acts_upstream_of_or_within ISO MGI:4819800 (MGI:4819434|PMID:20643340) RGD PMID:20643340 MGI:4819434 NCBI chr14:17,310,790...17,312,250
Ensembl chr14:17,310,426...17,313,093
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,106,876...40,417,661
Ensembl chr20:40,106,876...40,417,653
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO
IBA
(PMID:11602758)
GO_REF:0000033
RGD
GO_Central
PMID:11602758 GO_REF:0000033 NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:79,561,294...79,576,700
Ensembl chr 1:79,546,879...79,576,715
JBrowse link
G Rfpl4a ret finger protein-like 4A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,728,964...68,735,423
Ensembl chr 1:68,728,964...68,735,423
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,766,401...158,787,915
Ensembl chr 1:158,765,969...158,787,183
JBrowse link
G Trim30d tripartite motif-containing 30D involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:158,795,288...158,813,913
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,707,172...158,720,214
Ensembl chr 1:158,707,172...158,718,674
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim58 tripartite motif-containing 58 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:43,022,933...43,038,984
Ensembl chr10:43,022,996...43,034,476
JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915
JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:157,114,044...157,127,494
Ensembl chr 1:157,114,044...157,127,477
JBrowse link
reorganization of cellular membranes to establish viral sites of replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO
IEA
(PMID:19376974)
GO_REF:0000107
RGD
Ensembl
PMID:19376974 GO_REF:0000107 NCBI chr11:83,609,148...83,726,876
Ensembl chr11:83,609,069...83,724,080
JBrowse link
symbiont entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in
acts_upstream_of_positive_effect
IEA
ISO
GO_REF:0000107
(PMID:33163980)
(PMID:16051304), (PMID:33163980)
Ensembl
RGD
PMID:16051304 PMID:33163980 GO_REF:0000107 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977
JBrowse link
G Avp arginine vasopressin involved_in ISO (PMID:33713620) RGD PMID:33713620 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:43,046,531...43,059,046
Ensembl chr13:43,046,267...43,057,792
JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265
JBrowse link
G Cd209d CD209d molecule involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:1,891,109...1,897,559
Ensembl chr12:1,891,113...1,901,171
JBrowse link
G Cd300ld Cd300 molecule-like family member D involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,082,957...100,115,853
Ensembl chr10:100,083,490...100,115,821
JBrowse link
G Cd300lf Cd300 molecule-like family member F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,359,942...100,376,130
Ensembl chr10:100,359,943...100,376,041
JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831
JBrowse link
G Cd81 Cd81 molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) RGD PMID:1719235 MGI:49235 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Cldn1 claudin 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cldn6 claudin 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:12,710,302...12,713,987
Ensembl chr10:12,709,960...12,715,973
JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:16051304), (PMID:24623090) RGD PMID:16051304 PMID:24623090 NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985
JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in ISO (PMID:15479853), (PMID:24623090), (PMID:32766577) RGD PMID:15479853 PMID:24623090 PMID:32766577 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539
JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:69,407,125...69,416,872
Ensembl chr 4:69,407,835...69,416,859
JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO
GO_REF:0000107
(MGI:5640952|PMID:15831716)
Ensembl
RGD
PMID:15831716 GO_REF:0000107 MGI:5640952 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343) RGD PMID:16339146 PMID:18562523 PMID:26953343 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
JBrowse link
G Dag1 dystroglycan 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:46,962,233...47,043,870
Ensembl chr 3:46,962,243...47,043,901
JBrowse link
G Dppa1 developmental pluripotency associated 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,998,049...31,017,756
Ensembl chr10:30,998,049...31,017,756
JBrowse link
G ENSRNOG00000067229 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:83,921,470...83,930,590 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) RGD PMID:20202662 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:21501828)
UniProt
RGD
PMID:21501828 GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) RGD PMID:15650194 NCBI chr11:41,898,300...41,899,646
Ensembl chr11:41,898,356...41,900,441
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO
IEA
(PMID:23029581)
GO_REF:0000107
RGD
Ensembl
PMID:23029581 GO_REF:0000107 NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,118,667...31,151,730
Ensembl chr10:31,119,088...31,151,698
JBrowse link
G Havcr1l1 hepatitis A virus cellular receptor 1 like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,919,860...30,941,388
Ensembl chr10:30,923,809...30,941,108
JBrowse link
G Havcr1l2 hepatitis A virus cellular receptor 1 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,963,058...30,983,169
Ensembl chr10:30,968,739...30,981,979
JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
IEA
facilitates
GO_REF:0000108
GOC
RGD
PMID:12584308 GO_REF:0000108, RGD:633153 NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850
JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:19,922,409...19,960,495
Ensembl chr 8:19,922,460...19,960,350
JBrowse link
G Insr insulin receptor involved_in ISO (PMID:17001305) RGD PMID:17001305 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Itgav integrin subunit alpha V involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:68,838,514...68,926,653
Ensembl chr 3:68,838,189...68,926,639
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:12584355 RGD:1599797 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:54,362,712...54,469,351
Ensembl chr11:54,364,487...54,462,519
JBrowse link
G Nectin4 nectin cell adhesion molecule 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:83,802,589...83,821,711
Ensembl chr13:83,803,184...83,821,709
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)
RGD PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692
JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:79,561,294...79,576,700
Ensembl chr 1:79,546,879...79,576,715
JBrowse link
G Serpinb3 serpin family B member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:23,274,120...23,280,660
Ensembl chr13:23,274,484...23,313,682
JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) RGD PMID:12857889 NCBI chr 3:118,287,988...118,307,125
Ensembl chr 3:118,287,988...118,306,850
JBrowse link
G Siva1 SIVA1, apoptosis-inducing factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:131,705,323...131,709,697
Ensembl chr 6:131,705,323...131,709,690
JBrowse link
G Slc20a2 solute carrier family 20 member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:69,460,850...69,551,418
Ensembl chr16:69,460,462...69,521,711
JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:30341327)
Ensembl
RGD
PMID:30341327 GO_REF:0000107 NCBI chr 1:205,604,468...205,618,931
Ensembl chr 1:205,604,468...205,618,931
JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:6,628,288...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of
acts_upstream_of_positive_effect
ISO (PMID:22573858)
(PMID:33163980)
RGD PMID:22573858 PMID:33163980 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,060,308...31,101,262
Ensembl chr10:31,060,326...31,094,623
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142
JBrowse link
G Uvrag UV radiation resistance associated acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24550300)
GO_REF:0000107
RGD
Ensembl
PMID:24550300 GO_REF:0000107 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964
JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:67,441,205...67,585,950
Ensembl chr13:67,446,380...67,585,946
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:115,292,431...115,305,798
Ensembl chr 2:115,292,516...115,303,628
JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IEP RGD PMID:9630249 RGD:10045968 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Mmp9 matrix metallopeptidase 9 IDA RGD PMID:20000122 RGD:2325807 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:16256070 RGD:7207780 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA
ISO
GO_REF:0000107
(PMID:24878737)
Ensembl
RGD
PMID:24878737 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA
(MGI:5619479|PMID:17940959)
GO_REF:0000107
(PMID:16193069)
RGD
Ensembl
PMID:16193069 PMID:17940959 GO_REF:0000107 MGI:5619479 NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (MGI:5619479|PMID:17940959)
(PMID:16193069)
RGD PMID:16193069 PMID:17940959 MGI:5619479 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISO (MGI:6508519|PMID:33157038) RGD PMID:33157038 MGI:6508519 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO
IEA
(PMID:25556234)
GO_REF:0000107
RGD
Ensembl
PMID:25556234 GO_REF:0000107 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
JBrowse link
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO
IEA
(PMID:19129479)
GO_REF:0000107
RGD
Ensembl
PMID:19129479 GO_REF:0000107 NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:1,653,165...1,666,494
Ensembl chr20:1,653,165...1,666,494
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915
JBrowse link
G Tsg101 tumor susceptibility 101 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:97,412,689...97,442,589
Ensembl chr 1:97,410,848...97,442,554
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:32,560,047...32,589,015
Ensembl chr12:32,560,047...32,589,014
JBrowse link
G Zfp502 zinc finger protein 502 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:28,884,390...28,908,726 JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO
IEA
(PMID:24098578)
GO_REF:0000107
RGD
Ensembl
PMID:24098578 GO_REF:0000107 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link

Term paths to the root