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ONTOLOGY REPORT - ANNOTATIONS

Term:biological process involved in symbiotic interaction
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Accession:GO:0044403 term browser browse the term
Definition:A process carried out by gene products in an organism that enable the organism to engage in a symbiotic relationship, a more or less intimate association, with another organism. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs. Microscopic symbionts are often referred to as endosymbionts.
Synonyms:narrow_synonym: commensalism;   parasitism
 related_synonym: host-pathogen interaction;   symbiosis;   symbiosis, encompassing mutualism through parasitism;   symbiotic interaction;   symbiotic interaction between host and organism;   symbiotic interaction between organisms;   symbiotic interaction between species;   symbiotic process
 alt_id: GO:0043298;   GO:0044404;   GO:0072519;   GO:0085031

show annotations for term's descendants           Sort by:
 
adhesion of symbiont to host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbp1 guanylate binding protein 1 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr 2:248,343,334...248,423,402
Ensembl chr 2:248,398,917...248,409,570 		JBrowse link
G Gbp2 guanylate binding protein 2 acts_upstream_of_or_within
involved_in		 IEA
ISO		 GO_REF:0000107
(MGI:4412460|PMID:18025219)		 Ensembl
RGD		 PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 2:248,276,795...248,293,784
Ensembl chr 2:248,276,709...248,293,784 		JBrowse link
G Gbp4 guanylate binding protein 4 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr 2:248,249,232...248,263,104
Ensembl chr 2:248,249,468...248,263,168 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 NOT
NOT|involved_in		 ISO (PMID:20633027)
(MGI:5882877|PMID:20633027)		 RGD PMID:20633027 MGI:5882877 NCBI chr 9:61,680,529...61,691,202
Ensembl chr 9:61,680,530...61,690,956 		JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:2538243) RGD PMID:2538243 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059 		JBrowse link
G LOC103690086 uncharacterized LOC103690086 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr14:5,642,357...5,646,406 JBrowse link
G LOC685067 similar to guanylate binding protein family, member 6 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:248,215,324...248,241,278
Ensembl chr 2:248,219,428...248,239,899 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:12915581) RGD PMID:12915581 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO (PMID:19087225) RGD PMID:19087225 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455 		JBrowse link
biological process involved in interaction with host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2670590 (MGI:5297102|PMID:20709292)
GO_REF:0000107		 RGD
Ensembl		 PMID:20709292 GO_REF:0000107 MGI:5297102 NCBI chr 1:79,790,879...79,796,064
Ensembl chr 1:79,790,705...79,796,111 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO MGI:5297105 (MGI:5297102|PMID:20709292) RGD PMID:20709292 MGI:5297102 NCBI chr 7:14,426,481...14,435,987
Ensembl chr 7:14,429,701...14,435,967 		JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 acts_upstream_of_or_within ISO MGI:5297106 (MGI:5297102|PMID:20709292) RGD PMID:20709292 MGI:5297102 NCBI chr 2:191,903,626...192,264,872
Ensembl chr 2:192,253,629...192,264,840 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO MGI:5297107 (MGI:5297102|PMID:20709292) RGD PMID:20709292 MGI:5297102 NCBI chr 2:190,125,655...190,204,230
Ensembl chr 2:190,125,693...190,148,265 		JBrowse link
biological process involved in interaction with symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:23137809) RGD PMID:23137809 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347 		JBrowse link
G Fn1 fibronectin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12167537), (PMID:12421310), (PMID:19429745)		 Ensembl
RGD		 PMID:12167537 PMID:12421310 PMID:19429745 GO_REF:0000107 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078 		JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within
involved_in		 IEA
ISO		 GO_REF:0000107
MGI:104887|MGI:106609 (MGI:3608474|PMID:12751789)		 Ensembl
RGD		 PMID:12751789 GO_REF:0000107 MGI:3608474 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522 		JBrowse link
G Gpx2 glutathione peroxidase 2 acts_upstream_of_or_within ISO MGI:104887|MGI:106609 (MGI:3608474|PMID:12751789) RGD PMID:12751789 MGI:3608474 NCBI chr 6:99,839,960...99,843,245
Ensembl chr 6:99,839,960...99,843,245 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:20507888) RGD PMID:20507888 NCBI chr 9:61,680,529...61,691,202
Ensembl chr 9:61,680,530...61,690,956 		JBrowse link
G Plg plasminogen involved_in ISO (PMID:12818429) RGD PMID:12818429 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776 		JBrowse link
catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia chitinase, acidic involved_in IEA
ISO		 GO_REF:0000107
(MGI:1931335|PMID:11085997)		 Ensembl
RGD		 PMID:11085997 GO_REF:0000107 MGI:1931335 NCBI chr 2:208,750,348...208,797,388
Ensembl chr 2:208,749,996...208,797,402 		JBrowse link
catabolism by host of symbiont protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:26812398) RGD PMID:26812398 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594 		JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO
IBA		 (PMID:12857889)
PMID:21873635		 RGD PMID:12857889, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109 		JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO
IBA		 (PMID:12915581)
PMID:21873635		 RGD PMID:12915581, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585 		JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518 		JBrowse link
G Cfhr1 complement factor H-related 1 involved_in ISO (PMID:23487775) RGD PMID:23487775 NCBI chr13:56,862,666...56,877,650
Ensembl chr13:56,836,994...56,877,650 		JBrowse link
G Defb41 defensin beta 41 involved_in ISO (PMID:28181499) RGD PMID:28181499 NCBI chr15:46,179,787...46,182,308
Ensembl chr15:46,179,787...46,182,308 		JBrowse link
G F2 coagulation factor II involved_in IEA
ISO		 GO_REF:0000107
(PMID:20421939)		 Ensembl
RGD		 PMID:20421939 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031 		JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO
IEA		 (PMID:18797515)
GO_REF:0000107		 RGD
Ensembl		 PMID:18797515 GO_REF:0000107 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952 		JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328) RGD PMID:23006328
G Reg3g regenerating family member 3 gamma involved_in ISO (PMID:16931762)
(MGI:5897756|PMID:16931762)		 RGD PMID:16931762 MGI:5897756 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234 		JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO (PMID:22083756) RGD PMID:22083756 NCBI chr 3:151,688,213...151,689,813
Ensembl chr 3:151,688,454...151,689,711 		JBrowse link
G Spag11b sperm associated antigen 11b involved_in ISO (PMID:16411022) RGD PMID:16411022
G Spag11bl sperm associated antigen 11b-like involved_in ISO (PMID:16411022) RGD PMID:16411022 NCBI chr16:75,145,234...75,148,750
Ensembl chr16:75,145,401...75,147,415 		JBrowse link
DNA-templated viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11096080) RGD PMID:11096080 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245 		JBrowse link
early viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt2 cyclin T2 involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr13:44,475,959...44,516,892
Ensembl chr13:44,475,970...44,515,739 		JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr19:45,938,433...45,946,647
Ensembl chr19:45,938,915...45,945,741 		JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:28189564)
(MGI:5898166|PMID:28189564)		 RGD PMID:28189564 MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within
involved_in		 ISO (PMID:28189564)
MGI:3856636 (MGI:5898166|PMID:28189564)		 RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615 		JBrowse link
establishment of viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) RGD PMID:20091349 NCBI chr 5:59,063,532...59,068,196
Ensembl chr 5:59,063,531...59,068,188 		JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:18562523) RGD PMID:16081529 PMID:18562523 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO
ISS		 (PMID:21501828)
GO_REF:0000024		 RGD
UniProt		 PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:11296287)		 Ensembl
UniProt
RGD		 PMID:11296287 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO
IBA		 (PMID:12915581)
PMID:21873635		 RGD PMID:12915581, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585 		JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc19 leucine rich repeat containing 19 involved_in ISO (MGI:6204559|PMID:26776522) RGD PMID:26776522 MGI:6204559 NCBI chr 5:113,614,164...113,626,834
Ensembl chr 5:113,615,943...113,621,134 		JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in ISS
ISO		 GO_REF:0000024
(MGI:5641800|PMID:25757720)		 UniProt
RGD		 PMID:25757720 GO_REF:0000024 MGI:5641800 NCBI chr 4:9,965,323...10,004,650
Ensembl chr 4:9,966,891...10,002,247 		JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5544501|PMID:24310610) RGD PMID:24310610 MGI:5544501 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217 		JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:32276428) RGD PMID:32276428 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367 		JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 Cd4 molecule involved_in ISO (PMID:9166430) RGD PMID:9166430 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176 		JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISO (PMID:18647839) RGD PMID:18647839 NCBI chr 1:47,206,892...47,213,785
Ensembl chr 1:47,206,895...47,213,749 		JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) RGD PMID:25540360 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090 		JBrowse link
IRES-dependent viral translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA		 (PMID:17947529)
GO_REF:0000107		 RGD
Ensembl		 PMID:17947529 GO_REF:0000107 NCBI chr 2:205,525,194...205,552,987
Ensembl chr 2:205,525,204...205,552,991 		JBrowse link
G Denr density regulated reinitiation and release factor involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr12:38,095,717...38,117,758
Ensembl chr12:38,096,034...38,116,919 		JBrowse link
G Eif2d eukaryotic translation initiation factor 2D involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr13:47,935,138...47,958,459
Ensembl chr13:47,935,163...47,954,090 		JBrowse link
G Eif3a eukaryotic translation initiation factor 3, subunit A involved_in ISO (PMID:23766293), (PMID:24357634), (PMID:9573242) RGD PMID:9573242 PMID:23766293 PMID:24357634 NCBI chr 1:282,139,809...282,170,017
Ensembl chr 1:282,139,823...282,170,017 		JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B involved_in ISO (PMID:9573242) RGD PMID:9573242 NCBI chr12:16,285,730...16,310,190
Ensembl chr12:16,285,733...16,310,190 		JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D involved_in ISO (PMID:9573242) RGD PMID:9573242 NCBI chr 7:119,188,189...119,200,578
Ensembl chr 7:119,188,185...119,200,623 		JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F involved_in ISO (PMID:9573242) RGD PMID:9573242 NCBI chr 1:173,532,826...173,541,806
Ensembl chr 1:173,532,803...173,541,847 		JBrowse link
G LOC100364335 cold shock domain-containing protein E1-like IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:28,220,255...28,223,601
Ensembl chr 2:205,525,204...205,552,991
Ensembl chr19:205,525,204...205,552,991 		JBrowse link
G Mcts1 MCTS1, re-initiation and release factor involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr  X:124,894,269...124,906,129
Ensembl chr  X:124,894,466...124,906,162 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 7:144,077,901...144,103,723
Ensembl chr 7:144,078,496...144,101,893 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO (PMID:17947529), (PMID:21518806) RGD PMID:17947529 PMID:21518806 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718 		JBrowse link
G Ssb small RNA binding exonuclease protection factor La involved_in ISO (PMID:12384597) RGD PMID:12384597 NCBI chr 3:56,092,425...56,102,008
Ensembl chr 3:56,092,501...56,102,001 		JBrowse link
killing by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide acts_upstream_of_or_within
involved_in		 ISO (PMID:16020269), (PMID:16177355)
MGI:2182791 (MGI:3611523|PMID:16177355)		 RGD PMID:16020269 PMID:16177355 MGI:3611523 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518 		JBrowse link
G Defa5 defensin alpha 5 involved_in ISO (PMID:9169780) RGD PMID:9169780 NCBI chr16:75,338,050...75,340,401
Ensembl chr16:75,338,052...75,340,360 		JBrowse link
G Defb14 defensin beta 14 involved_in ISO (PMID:16436752) RGD PMID:16436752 NCBI chr16:75,647,523...75,650,913
Ensembl chr16:75,647,680...75,648,538 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) RGD PMID:22832495 NCBI chr 4:157,676,336...157,680,322
Ensembl chr 4:157,676,595...157,679,962 		JBrowse link
G Mbl1 mannose binding lectin 1 acts_upstream_of_or_within ISO MGI:96924 (MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:3577322 NCBI chr16:18,736,154...18,742,193
Ensembl chr16:18,736,154...18,742,193 		JBrowse link
G Mbl2 mannose binding lectin 2 acts_upstream_of_or_within ISO MGI:96923 (MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:3577322 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962 		JBrowse link
G Pf4 platelet factor 4 involved_in ISO (PMID:23245326) RGD PMID:23245326 NCBI chr14:18,848,549...18,849,258
Ensembl chr14:18,848,549...18,849,258 		JBrowse link
late viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt2 cyclin T2 involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr13:44,475,959...44,516,892
Ensembl chr13:44,475,970...44,515,739 		JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated involved_in ISO (PMID:21509660) RGD PMID:21509660 NCBI chr19:45,938,433...45,946,647
Ensembl chr19:45,938,915...45,945,741 		JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:2249772) RGD PMID:2249772 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558 		JBrowse link
maintenance of symbiont-containing vacuole by host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
ISS		 (PMID:18665841)
(MGI:4457239|PMID:18665841)
GO_REF:0000024		 RGD
UniProt		 PMID:18665841 GO_REF:0000024 MGI:4457239 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360 		JBrowse link
mitigation of host defenses by symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615 		JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575 		JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27777077) RGD PMID:27777077 NCBI chr 6:127,327,959...127,334,430
Ensembl chr 6:127,327,959...127,334,428 		JBrowse link
modulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:5787727 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179 		JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine-rich repeat protein 2 involved_in ISO (PMID:15893726) RGD PMID:15893726 NCBI chr 8:122,240,393...122,290,439
Ensembl chr 8:122,243,016...122,311,431 		JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24514761)		 Ensembl
RGD		 PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314 		JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575 		JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:2194290), (PMID:8419915)		 Ensembl
RGD		 PMID:2194290 PMID:8419915 GO_REF:0000107 NCBI chr 3:79,876,938...79,882,319
Ensembl chr 3:79,876,938...79,882,319 		JBrowse link
modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO
IBA		 (PMID:20010814)
PMID:21873635		 RGD PMID:20010814, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:40,255,776...40,303,092
Ensembl chr10:40,255,776...40,296,470 		JBrowse link
modulation by virus of host process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 involved_in ISO (PMID:16254364) RGD PMID:16254364 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193 		JBrowse link
G Rraga Ras-related GTP binding A involved_in ISO
ISS		 (PMID:8995684)
GO_REF:0000024		 RGD
UniProt		 PMID:8995684 GO_REF:0000024 NCBI chr 5:104,941,067...104,942,662
Ensembl chr 5:104,941,066...104,942,662 		JBrowse link
G Rxra retinoid X receptor alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:11915042)		 Ensembl
RGD		 PMID:11915042 GO_REF:0000107 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908 		JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:1247599 RGD:2317429 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO
ISS		 (PMID:16227268)
GO_REF:0000024		 RGD
UniProt		 PMID:16227268 GO_REF:0000024 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:11175319 RGD:2325644 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503 		JBrowse link
negative regulation by host of symbiont molecular function term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:26812398) RGD PMID:26812398 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594 		JBrowse link
G Rab9a RAB9A, member RAS oncogene family involved_in ISO (PMID:18787122) RGD PMID:18787122 NCBI chr  X:29,525,256...29,547,295
Ensembl chr  X:29,525,256...29,547,294 		JBrowse link
G Sftpd surfactant protein D involved_in IEA
ISO		 GO_REF:0000107
(PMID:28228557)		 Ensembl
RGD		 PMID:28228557 GO_REF:0000107 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174 		JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO
IEA		 (PMID:23544079)
GO_REF:0000107		 RGD
Ensembl		 PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575 		JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653 		JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl12 chemokine (C-C motif) ligand 12 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:69,476,866...69,478,416
Ensembl chr10:69,476,775...69,478,462 		JBrowse link
G Ccnk cyclin K involved_in ISO (PMID:21555514) RGD PMID:21555514 NCBI chr 6:132,090,235...132,113,560
Ensembl chr 6:132,090,218...132,113,557 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3053078 (MGI:55926|PMID:6327825) RGD PMID:6327825 MGI:55926 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:24380861) RGD PMID:24380861 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5700304|PMID:16601681)		 UniProt
RGD		 PMID:16601681 GO_REF:0000024 MGI:5700304 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:25244949) RGD PMID:25244949 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Vapa VAMP associated protein A involved_in ISO
IEA		 (PMID:19515777)
GO_REF:0000107		 RGD
Ensembl		 PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:23355615) RGD PMID:23355615 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165 		JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO
IEA		 (PMID:23544079)
GO_REF:0000107		 RGD
Ensembl		 PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575 		JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653 		JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3053078 (MGI:1098064|PMID:9343248)
MGI:2180785 (MGI:2148352|PMID:11483763)
(MGI:3848729|PMID:19358828)		 RGD PMID:9343248 PMID:11483763 PMID:19358828 MGI:1098064 MGI:2148352 MGI:3848729 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345 		JBrowse link
G Crp C-reactive protein involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12522210) RGD PMID:12522210 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261 		JBrowse link
G Mptx1 mucosal pentraxin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:91,772,927...91,827,231
Ensembl chr13:91,773,004...91,776,397 		JBrowse link
G Ptx3 pentraxin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653 		JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:17690245) RGD PMID:17690245 NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055 		JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISO
ISS		 (PMID:10841574)
GO_REF:0000024		 RGD
UniProt		 PMID:10841574 GO_REF:0000024 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066 		JBrowse link
G Ccl4 C-C motif chemokine ligand 4 involved_in ISO (PMID:10841574) RGD PMID:10841574 NCBI chr10:70,870,926...70,886,357
Ensembl chr10:70,884,531...70,886,355 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10841574) RGD PMID:10841574 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:16540471) RGD PMID:16540471 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:17005673)
GO_REF:0000024		 RGD
UniProt		 PMID:17005673 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) RGD PMID:18774950 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277 		JBrowse link
G Pou2f3 POU class 2 homeobox 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:14645924)		 Ensembl
RGD		 PMID:14645924 GO_REF:0000107 NCBI chr 8:47,412,063...47,495,042
Ensembl chr 8:47,410,220...47,494,982 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
ISS		 (PMID:17555596)
GO_REF:0000024		 RGD
UniProt		 PMID:17555596 GO_REF:0000024 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:7745706) RGD PMID:7745706 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048 		JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:14645924), (PMID:16540471) RGD PMID:14645924 PMID:16540471 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370 		JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISO
ISS		 (PMID:20484494)
GO_REF:0000024		 RGD
UniProt		 PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563 		JBrowse link
negative regulation by symbiont of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinb9 serpin family B member 9 involved_in ISO (PMID:22090449) RGD PMID:22090449 NCBI chr17:32,648,846...32,673,047
Ensembl chr17:32,650,441...32,661,865 		JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:15825084) RGD PMID:15825084 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
negative regulation of cytolysis by symbiont of host cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Krt6a keratin 6A involved_in ISO (PMID:23006328) RGD PMID:23006328
negative regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgav integrin subunit alpha V involved_in ISO (PMID:10570297) RGD PMID:10570297 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411 		JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328) RGD PMID:23006328
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437405|PMID:22284121), (MGI:5437427|PMID:20686043), (MGI:5448513|PMID:21919738)
(PMID:19036818), (PMID:20686043), (PMID:20943977)		 UniProt
RGD		 PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353 		JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950 		JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668 		JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671 		JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO
IBA		 (PMID:18779051), (PMID:21835787)
PMID:21873635		 RGD PMID:18779051 PMID:21835787, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:17005673)
GO_REF:0000024		 RGD
UniProt		 PMID:17005673 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) RGD PMID:18774950 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899 		JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:29211708)
(MGI:6271895|PMID:29728365)		 RGD PMID:29211708 PMID:29728365 MGI:6271895 NCBI chr14:83,889,138...83,930,263
Ensembl chr14:83,889,089...83,930,522 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29211708)		 UniProt
RGD		 PMID:29211708 GO_REF:0000024 NCBI chr15:36,918,843...36,946,712
Ensembl chr15:36,918,843...36,946,708 		JBrowse link
G Resf1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) RGD PMID:29728365 MGI:6271895 NCBI chr 4:183,879,177...183,905,807
Ensembl chr 4:183,896,303...183,905,297 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) RGD PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr 2:196,495,867...196,527,412
Ensembl chr 2:196,495,867...196,527,127 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:29211708) RGD PMID:29211708 NCBI chr16:3,050,506...3,108,168
Ensembl chr16:3,051,449...3,105,531 		JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within
involved_in		 ISO MGI:2143362 (MGI:3842857|PMID:19270682), (MGI:5440670|PMID:20164836)
(MGI:5440670|PMID:20164836)		 RGD PMID:19270682 PMID:20164836 MGI:3842857 MGI:5440670 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043 		JBrowse link
negative regulation of single-species biofilm formation in or on host organism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpifa1 BPI fold containing family A, member 1 involved_in ISO
IBA
ISS		 (PMID:23499554)
(MGI:5484728|PMID:23499554)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:23499554, PMID:21873635, PMID:21873635 GO_REF:0000024 MGI:5484728, RGD:13792537, RGD:13792537 NCBI chr 3:149,624,867...149,630,610
Ensembl chr 3:149,624,712...149,630,613 		JBrowse link
G Bpifa5 BPI fold containing family A, member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 3:149,643,481...149,649,398
Ensembl chr 3:149,643,481...149,649,398 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12037568) RGD PMID:12037568 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261 		JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 involved_in ISO (PMID:12200142) RGD PMID:12200142 NCBI chr 7:126,096,793...126,176,468
Ensembl chr 7:126,096,793...126,176,468 		JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Apcs amyloid P component, serum involved_in ISO
IEA		 (PMID:23544079)
GO_REF:0000107		 RGD
Ensembl		 PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849 		JBrowse link
G Ciita class II, major histocompatibility complex, transactivator involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608 		JBrowse link
G Fcna ficolin A involved_in ISO (PMID:22851708) RGD PMID:22851708 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272 		JBrowse link
G Fcnb ficolin B involved_in ISO (PMID:22851708) RGD PMID:22851708 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284 		JBrowse link
G Gsn gelsolin involved_in ISO (PMID:23575248) RGD PMID:23575248 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:5437420|PMID:21253575), (MGI:5780029|PMID:25738301)
(MGI:5780029|PMID:25738301)
PMID:21873635		 RGD PMID:21253575 PMID:25738301, PMID:21873635, PMID:21873635 MGI:5437420 MGI:5780029, RGD:13792537, RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA		 (PMID:21253575), (PMID:23358889)
(MGI:5437420|PMID:21253575)
PMID:21873635		 RGD PMID:21253575 PMID:23358889, PMID:21873635, PMID:21873635 MGI:5437420, RGD:13792537, RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO
IBA		 (PMID:20943977), (PMID:21253575), (PMID:23358889)
(MGI:5437420|PMID:21253575)
PMID:21873635		 RGD PMID:20943977 PMID:21253575 PMID:23358889, PMID:21873635, PMID:21873635 MGI:5437420, RGD:13792537, RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901 		JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222 		JBrowse link
G Ly6e lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)		 RGD PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr 7:116,355,426...116,359,862
Ensembl chr 7:116,355,698...116,359,862 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IMP RGD PMID:22850678 RGD:8693392 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489 		JBrowse link
G Nbn nibrin IMP RGD PMID:22850678 RGD:8693392 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864 		JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653 		JBrowse link
G Rad50 RAD50 double strand break repair protein IMP RGD PMID:22850678 RGD:8693392 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142 		JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390 		JBrowse link
G Trim10 tripartite motif-containing 10 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr20:2,182,945...2,191,640
Ensembl chr20:2,182,941...2,191,640 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim26 tripartite motif-containing 26 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18248090)		 Ensembl
RGD		 PMID:18248090 GO_REF:0000107 NCBI chr20:2,201,685...2,224,481
Ensembl chr20:2,201,683...2,224,463 		JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996
G Trim59 tripartite motif-containing 59 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 2:165,629,903...165,641,751
Ensembl chr 2:165,629,918...165,641,573 		JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694 		JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within ISO MGI:4941203 (MGI:4939544|PMID:21173229) RGD PMID:21173229 MGI:4939544 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236 		JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (MGI:5486557|PMID:16378963) RGD PMID:16378963 MGI:5486557 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542 		JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) RGD PMID:18005698 NCBI chr 1:220,744,195...220,746,224
Ensembl chr 1:220,744,195...220,746,224 		JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO
ISS		 (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
GO_REF:0000024		 RGD
UniProt		 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 MGI:5437405 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5487533|PMID:20038207)
(PMID:19189853), (PMID:19840259)		 UniProt
RGD		 PMID:19189853 PMID:19840259 PMID:20038207 GO_REF:0000024 MGI:5487533 NCBI chr 6:1,428,845...1,466,193
Ensembl chr 6:1,428,834...1,466,201 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) RGD PMID:23093934 NCBI chr 1:229,003,778...229,019,532
Ensembl chr 1:229,003,961...229,019,527 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA		 (PMID:21253575)
PMID:21873635		 RGD PMID:21253575, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO
IBA		 (PMID:20943977), (PMID:21253575)
PMID:21873635		 RGD PMID:20943977 PMID:21253575, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901 		JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:19008854) RGD PMID:19008854 NCBI chr 5:106,865,192...106,865,746
Ensembl chr 5:106,865,192...106,865,746 		JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:4867319|PMID:21123651)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21123651 GO_REF:0000024 GO_REF:0000107 MGI:4867319 NCBI chr 8:22,402,877...22,440,984
Ensembl chr 8:22,402,890...22,440,885 		JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in ISO (PMID:19357168) RGD PMID:19357168 NCBI chr 5:173,624,862...173,629,124
Ensembl chr 5:173,624,310...173,626,248 		JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in ISO
IBA		 (PMID:21036379)
PMID:21873635		 RGD PMID:21036379, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:140,602,553...140,608,892
Ensembl chr 1:140,601,791...140,608,946 		JBrowse link
G LOC103689988 2'-5'-oligoadenylate synthase 1A-like involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:42,367,110...42,376,531
Ensembl chr12:42,367,535...42,376,426 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) RGD PMID:25193851 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:20451243)
(MGI:4881394|PMID:20451243)		 RGD PMID:20451243 MGI:4881394 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567 		JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24500530)
(PMID:14687945), (PMID:15047845), (PMID:16202617)		 Ensembl
RGD		 PMID:14687945 PMID:15047845 PMID:16202617 PMID:24500530 GO_REF:0000107 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950 		JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in ISO
IEA		 (PMID:31133753)
GO_REF:0000107		 RGD
Ensembl		 PMID:31133753 GO_REF:0000107 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964 		JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in ISO
IBA		 (PMID:20844035)
(PMID:18931074)
(PMID:19923450)
PMID:21873635		 RGD PMID:18931074 PMID:19923450 PMID:20844035, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:41,200,680...41,211,393
Ensembl chr12:41,200,718...41,211,909 		JBrowse link
G Oas1b 2-5 oligoadenylate synthetase 1B involved_in ISS
IBA		 GO_REF:0000024
PMID:21873635		 UniProt PMID:21873635, PMID:21873635 GO_REF:0000024, RGD:13792537, RGD:13792537 NCBI chr12:41,255,762...41,266,430
Ensembl chr12:41,227,825...41,307,352 		JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:41,281,479...41,290,500
Ensembl chr12:41,281,559...41,290,497 		JBrowse link
G Oas1g 2'-5' oligoadenylate synthetase 1G involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:42,343,103...42,355,139
Ensembl chr12:42,343,123...42,355,131 		JBrowse link
G Oas1h 2 ' -5 ' oligoadenylate synthetase 1H involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:41,214,587...41,224,254
Ensembl chr12:41,214,587...41,224,254 		JBrowse link
G Oas1i 2 ' -5 ' oligoadenylate synthetase 1I involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:41,155,489...41,167,501
Ensembl chr12:41,155,497...41,167,505 		JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:41,341,417...41,363,124
Ensembl chr12:41,340,815...41,363,161 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO
IBA		 (PMID:19056102), (PMID:19923450)
PMID:21873635		 RGD PMID:19056102 PMID:19923450, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:41,313,081...41,368,217
Ensembl chr12:41,316,764...41,336,562 		JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like involved_in ISO
IBA		 (PMID:18931074), (PMID:20074559)
PMID:21873635		 RGD PMID:18931074 PMID:20074559, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:47,444,138...47,456,680
Ensembl chr12:47,444,104...47,456,894 		JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr12:47,470,074...47,483,131
Ensembl chr12:47,469,598...47,482,961 		JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:22176891) RGD PMID:22176891 NCBI chr 7:117,291,592...117,300,878
Ensembl chr 7:117,291,877...117,300,662 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5284800|PMID:15308695)
GO_REF:0000024
(PMID:15308695)		 Ensembl
RGD
UniProt		 PMID:15308695 GO_REF:0000024 GO_REF:0000107 MGI:5284800 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G Rnasel ribonuclease L involved_in ISO
IBA		 (PMID:19923450)
PMID:21873635		 RGD PMID:19923450, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:71,188,712...71,202,636
Ensembl chr13:71,192,142...71,202,625 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5431072|PMID:21880757)
(PMID:21957124)		 Ensembl
RGD		 PMID:21880757 PMID:21957124 GO_REF:0000107 MGI:5431072 NCBI chr 6:45,655,947...45,669,083
Ensembl chr 6:45,655,954...45,669,148 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:26735137)		 Ensembl
UniProt
RGD		 PMID:26735137 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:21,890,214...21,896,045
Ensembl chr 8:21,890,319...21,896,031 		JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (PMID:19333378) RGD PMID:19333378 NCBI chr 3:160,799,979...160,802,228
Ensembl chr 3:160,799,981...160,802,433 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr20:5,829,412...5,865,877
Ensembl chr20:5,831,119...5,865,854 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr 4:7,994,025...8,187,455
Ensembl chr 4:8,066,737...8,185,935 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218)
(MGI:5645191|PMID:24882218)		 RGD PMID:24882218 MGI:5645191 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in IDA
ISO		 PMID:21876179
(PMID:21876179)
(PMID:21102435)		 RGD PMID:21102435 PMID:21876179, PMID:21876179, PMID:21876179 RGD:8554819, RGD:8554819 NCBI chr 4:66,012,111...66,062,160
Ensembl chr 4:66,011,915...66,062,089 		JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19207730), (PMID:22347431) RGD PMID:19207730 PMID:22347431 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443 		JBrowse link
negative regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575 		JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (PMID:18827027) RGD PMID:18827027 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542 		JBrowse link
G Crebbp CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) RGD PMID:11583620 MGI:2151262 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) RGD PMID:25193851 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261 		JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962 		JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483) RGD PMID:16740483 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030 		JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr15:41,897,191...41,936,545
Ensembl chr15:41,927,241...41,935,718 		JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim26 tripartite motif-containing 26 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18248090)		 Ensembl
RGD		 PMID:18248090 GO_REF:0000107 NCBI chr20:2,201,685...2,224,481
Ensembl chr20:2,201,683...2,224,463 		JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451 		JBrowse link
G Trim35 tripartite motif-containing 35 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18248090)		 Ensembl
RGD		 PMID:18248090 GO_REF:0000107 NCBI chr15:42,960,255...42,976,798
Ensembl chr15:42,960,307...42,976,792 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694 		JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO
IEA		 (PMID:18249148)
GO_REF:0000107		 RGD
Ensembl		 PMID:18249148 GO_REF:0000107 NCBI chr10:91,200,874...91,202,986
Ensembl chr10:91,200,874...91,202,984 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO (PMID:20943977) RGD PMID:20943977 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901 		JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO
IEA		 (PMID:18249148), (PMID:18483487)
GO_REF:0000107		 RGD
Ensembl		 PMID:18249148 PMID:18483487 GO_REF:0000107 NCBI chr 2:231,866,888...231,882,002
Ensembl chr 2:231,867,135...231,881,939 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943 		JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:16873258) RGD PMID:16873258 NCBI chr 9:92,675,103...92,718,489
Ensembl chr 9:92,681,078...92,717,929 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030 		JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr15:41,897,191...41,936,545
Ensembl chr15:41,927,241...41,935,718 		JBrowse link
G Trim14 tripartite motif-containing 14 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:62,128,941...62,154,424
Ensembl chr 5:62,128,941...62,153,786 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO
IBA		 (PMID:18248090)
(MGI:5545996|PMID:18248090)
PMID:21873635		 RGD PMID:18248090, PMID:21873635, PMID:21873635 MGI:5545996, RGD:13792537, RGD:13792537 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212 		JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242 		JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694 		JBrowse link
G Ubp1 upstream binding protein 1 involved_in ISO (PMID:8114710) RGD PMID:8114710 NCBI chr 8:122,196,576...122,241,368
Ensembl chr 8:122,197,027...122,240,357 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS		 (PMID:14679154)
GO_REF:0000024		 RGD
UniProt		 PMID:14679154 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569 		JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:5552992|PMID:24550300)
PMID:21873635		 RGD PMID:24550300, PMID:21873635, PMID:21873635 MGI:5552992, RGD:13792537, RGD:13792537 NCBI chr 9:94,879,876...94,915,231
Ensembl chr 9:94,879,745...94,915,228 		JBrowse link
G Atg16l2 autophagy related 16-like 2 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:5552992|PMID:24550300)
PMID:21873635		 RGD PMID:24550300, PMID:21873635, PMID:21873635 MGI:5552992, RGD:13792537, RGD:13792537 NCBI chr 1:166,401,271...166,415,078
Ensembl chr 1:166,401,271...166,413,564 		JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within
involved_in		 IEA
ISO		 GO_REF:0000107
(MGI:5552992|PMID:24550300)		 Ensembl
RGD		 PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124 		JBrowse link
neutrophil-mediated killing of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:104696 (MGI:6478086|PMID:22419116) RGD PMID:22419116 MGI:6478086 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:108005 (MGI:6478086|PMID:22419116)
GO_REF:0000107		 RGD
Ensembl		 PMID:22419116 GO_REF:0000107 MGI:6478086 NCBI chr 1:191,829,547...191,883,991
Ensembl chr 1:191,829,555...191,884,298 		JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed acts_upstream_of_or_within ISO MGI:2182177 (MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:4353632 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO MGI:3576788 (MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:4353632 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300 		JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed involved_in ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232 		JBrowse link
G F2 coagulation factor II involved_in IEA
ISO		 GO_REF:0000107
(PMID:20421939)		 Ensembl
RGD		 PMID:20421939 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031 		JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 acts_upstream_of_or_within ISO MGI:1930003 (MGI:5471912|PMID:23241959) RGD PMID:23241959 MGI:5471912 NCBI chr 9:14,727,887...14,743,371
Ensembl chr 9:14,727,976...14,809,447 		JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:14,713,935...14,725,945
Ensembl chr 9:14,713,935...14,724,093 		JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO MGI:3706236 (MGI:5518492|PMID:24042119) RGD PMID:24042119 MGI:5518492 NCBI chr 8:116,318,963...116,322,181
Ensembl chr 8:116,318,963...116,322,181 		JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G acts_upstream_of_or_within
involved_in		 IEA
ISO		 GO_REF:0000107
MGI:2182170 (MGI:4353632|PMID:11907569)		 Ensembl
RGD		 PMID:11907569 GO_REF:0000107 MGI:4353632 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO MGI:3576788 (MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:4353632 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300 		JBrowse link
positive regulation by host of symbiont catalytic activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sugt1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone involved_in ISO (PMID:23935490) RGD PMID:23935490 NCBI chr15:61,873,158...61,913,983
Ensembl chr15:61,873,056...61,914,072 		JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:5787727 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575 		JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562 		JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO
IEA		 (PMID:19515777)
GO_REF:0000107		 RGD
Ensembl		 PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
G Ythdc2 YTH domain containing 2 involved_in ISO (PMID:21559518) RGD PMID:21559518 NCBI chr 1:182,072,386...182,141,399
Ensembl chr 1:182,085,899...182,140,570 		JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594 		JBrowse link
G Apoe apolipoprotein E involved_in ISO
IEA		 (PMID:25122793)
GO_REF:0000107		 RGD
Ensembl		 PMID:25122793 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057 		JBrowse link
G Cav2 caveolin 2 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2180785 (MGI:2148352|PMID:11483763)
MGI:3027072 (MGI:1098064|PMID:9343248)		 RGD PMID:9343248 PMID:11483763 MGI:1098064 MGI:2148352 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345 		JBrowse link
G Cfl1 cofilin 1 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P01580 (MGI:4840165|PMID:20889566)		 Ensembl
RGD		 PMID:20889566 GO_REF:0000107 MGI:4840165 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300 		JBrowse link
G Ifng interferon gamma involved_in ISO UniProtKB:P09581 (MGI:4840165|PMID:20889566) RGD PMID:20889566 MGI:4840165 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419 		JBrowse link
G Igf2r insulin-like growth factor 2 receptor involved_in ISO (PMID:20889566) RGD PMID:20889566 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477 		JBrowse link
G LOC100911237 zinc finger protein 420-like involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) RGD PMID:23861867 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848 		JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562 		JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO
IEA		 (PMID:25556234)
GO_REF:0000107		 RGD
Ensembl		 PMID:25556234 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638 		JBrowse link
G LOC100911237 zinc finger protein 420-like involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA		 (PMID:23861867)
GO_REF:0000107		 RGD
Ensembl		 PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO
IEA		 (PMID:19515777)
GO_REF:0000107		 RGD
Ensembl		 PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 involved_in ISO (PMID:25297984) RGD PMID:25297984 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485 		JBrowse link
G Ctdp1 CTD phosphatase subunit 1 involved_in ISO (PMID:15723517) RGD PMID:15723517 NCBI chr18:76,922,913...76,985,095
Ensembl chr18:76,922,934...76,984,203 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:16687403) RGD PMID:16687403 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in ISO (PMID:26748656) RGD PMID:26748656 NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889 		JBrowse link
G Hpn hepsin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:15614436)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:15614436 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:7657162)		 Ensembl
RGD		 PMID:7657162 GO_REF:0000107 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575 		JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO (PMID:26311876) RGD PMID:26311876 NCBI chr20:10,844,234...10,869,830
Ensembl chr20:10,844,266...10,869,821 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO (PMID:16687403) RGD PMID:16687403 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:16687403) RGD PMID:16687403 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:15905409), (PMID:19818711) RGD PMID:15905409 PMID:19818711 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782 		JBrowse link
G Sp1 Sp1 transcription factor involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629 		JBrowse link
G Taf11 TATA-box binding protein associated factor 11 involved_in ISO (PMID:9108034) RGD PMID:9108034 NCBI chr20:7,476,648...7,484,417
Ensembl chr20:7,476,651...7,482,747 		JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:2833704) RGD PMID:2833704 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370 		JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISO
ISS		 (PMID:20484494)
GO_REF:0000024		 RGD
UniProt		 PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563 		JBrowse link
positive regulation by symbiont of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in ISO
IEA		 UniProtKB:O95352 (PMID:28389568)
GO_REF:0000107		 RGD
Ensembl		 PMID:28389568 GO_REF:0000107 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140 		JBrowse link
G Atg7 autophagy related 7 involved_in ISO UniProtKB:Q9H1Y0 (PMID:28389568) RGD PMID:28389568 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124 		JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103), (PMID:28389568)
(MGI:3656111|PMID:16888103)		 RGD PMID:16888103 PMID:28389568 MGI:3656111 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO UniProtKB:Q8IYT8 (PMID:28389568) RGD PMID:28389568 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702 		JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in ISO UniProtKB:O75385 (PMID:28389568) RGD PMID:28389568 NCBI chr10:48,050,079...48,129,377
Ensembl chr10:48,050,803...48,129,377 		JBrowse link
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:23137809) RGD PMID:23137809 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453 		JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IMP HIV-1 RGD PMID:19034668 RGD:4890424 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614 		JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24514761)		 Ensembl
RGD		 PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314 		JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:15546957) RGD PMID:15546957 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863 		JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5586806|PMID:10725737)		 Ensembl
RGD		 PMID:10725737 GO_REF:0000107 MGI:5586806 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457 		JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10670585) RGD PMID:10670585 NCBI chr 6:28,382,937...28,388,771
Ensembl chr 6:28,382,962...28,388,967 		JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275 		JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Top2a DNA topoisomerase II alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:16712776)		 Ensembl
RGD		 PMID:16712776 GO_REF:0000107 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:16712776) RGD PMID:16712776 NCBI chr15:10,262,972...10,319,741
Ensembl chr15:10,262,651...10,320,233 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185 PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:17940959), (PMID:24878737) RGD PMID:17940959 PMID:24878737 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753 		JBrowse link
G Cd4 Cd4 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849 		JBrowse link
G Lgals1 galectin 1 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr 7:120,153,184...120,156,290
Ensembl chr 7:120,153,184...120,156,289 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190 		JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) RGD PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr11:38,063,914...38,103,406
Ensembl chr11:38,063,915...38,103,290 		JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in ISO
IEA		 (PMID:32404436)
GO_REF:0000107		 RGD
Ensembl		 PMID:32404436 GO_REF:0000107 NCBI chr 8:49,469,804...49,503,304
Ensembl chr 8:49,469,503...49,502,647 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:43,600,006...43,607,879 JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5447606|PMID:18362360)
(PMID:18362360), (PMID:19651874)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18362360 PMID:19651874 GO_REF:0000024 GO_REF:0000107 MGI:5447606 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236 		JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:21289159)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21289159 GO_REF:0000024 GO_REF:0000107 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:23386060) RGD PMID:23386060 NCBI chr16:54,899,452...54,918,616
Ensembl chr16:54,899,452...54,918,613 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:23137809) RGD PMID:23137809 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:20862261) RGD PMID:20862261 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995 		JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISO (PMID:26567527) RGD PMID:26567527 NCBI chr12:24,365,941...24,438,088
Ensembl chr12:24,367,199...24,438,019 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) RGD PMID:21191019 MGI:5693363 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:53,750,470...53,870,288
Ensembl chr13:53,750,473...53,870,428 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15231837)		 Ensembl
RGD		 PMID:15231837 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253 		JBrowse link
G Pkn2 protein kinase N2 involved_in ISO
IEA		 (PMID:15364941)
GO_REF:0000107		 RGD
Ensembl		 PMID:15364941 GO_REF:0000107 NCBI chr 2:248,735,699...248,840,735
Ensembl chr 2:248,735,699...248,840,735 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO
IEA		 (PMID:22479552)
GO_REF:0000107		 RGD
Ensembl		 PMID:22479552 GO_REF:0000107 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443 		JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 2:178,354,830...178,366,843
Ensembl chr 2:178,354,890...178,366,685 		JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:140,822,141...140,835,244
Ensembl chr 5:140,822,141...140,834,959 		JBrowse link
G Ppih peptidylprolyl isomerase H involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:138,343,934...138,361,743
Ensembl chr 5:138,352,916...138,361,702 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:20614012) RGD PMID:20614012 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr20:5,829,412...5,865,877
Ensembl chr20:5,831,119...5,865,854 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr 4:7,994,025...8,187,455
Ensembl chr 4:8,066,737...8,185,935 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO
ISS		 (PMID:11641396)
GO_REF:0000024		 RGD
UniProt		 PMID:11641396 GO_REF:0000024 NCBI chr 7:144,121,688...144,126,860
Ensembl chr 7:144,121,744...144,126,857 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO (PMID:31849860) RGD PMID:31849860 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544 		JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) RGD PMID:22539786 MGI:5441682 NCBI chr17:43,600,006...43,607,879 JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO
ISS		 (PMID:16227268)
GO_REF:0000024		 RGD
UniProt		 PMID:16227268 GO_REF:0000024 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO
IEA		 (PMID:22673088)
GO_REF:0000107		 RGD
Ensembl		 PMID:22673088 GO_REF:0000107 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761 		JBrowse link
G Cd209 CD209 molecule involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:2,406,879...2,413,324
Ensembl chr12:2,406,879...2,413,324 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO
IEA		 (PMID:22673088)
GO_REF:0000107		 RGD
Ensembl		 PMID:22673088 GO_REF:0000107 NCBI chr12:2,273,649...2,278,594
Ensembl chr12:2,273,941...2,277,169 		JBrowse link
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:28189564)
(MGI:5898166|PMID:28189564)		 RGD PMID:28189564 MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within
involved_in		 ISO (PMID:28189564)
MGI:3856636 (MGI:5898166|PMID:28189564)		 RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO
IEA		 (PMID:22673088)
GO_REF:0000107		 RGD
Ensembl		 PMID:22673088 GO_REF:0000107 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185), (PMID:16193069), (PMID:17940959) RGD PMID:11595185 PMID:16193069 PMID:17940959 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:16193069) RGD PMID:16193069 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
positive regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173 		JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241 		JBrowse link
G Tmem250 transmembrane protein 250 involved_in ISO (PMID:21667337) RGD PMID:21667337 NCBI chr 3:3,590,783...3,594,475
Ensembl chr 3:3,590,783...3,594,475 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA
ISO		 GO_REF:0000107
(MGI:5619479|PMID:17940959)		 Ensembl
RGD		 PMID:17940959 GO_REF:0000107 MGI:5619479 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:17940959)
(MGI:5619479|PMID:17940959)		 RGD PMID:17940959 MGI:5619479 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3|UniProtKB:Q9Y3E7 (PMID:14505570), (PMID:23051622) RGD PMID:14505570 PMID:23051622 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633|UniProtKB:Q9Y3E7 (PMID:23051622) RGD PMID:23051622 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO UniProtKB:O43633|UniProtKB:Q9UQN3 (PMID:14505570), (PMID:23051622) RGD PMID:14505570 PMID:23051622 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA
ISO		 GO_REF:0000107
(PMID:14505570)		 Ensembl
RGD		 PMID:14505570 GO_REF:0000107 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:23137809) RGD PMID:23137809 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185 PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) RGD PMID:11595185 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
positive regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11096080) RGD PMID:11096080 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 IDA from cytomegalovirus immediate-early promoter RGD PMID:11746500 RGD:2293493 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207 		JBrowse link
G Mdfic MyoD family inhibitor domain containing involved_in ISO
IBA		 (PMID:10671520)
PMID:21873635		 RGD PMID:10671520, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:42,202,546...42,282,499
Ensembl chr 4:42,202,838...42,282,496 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) RGD PMID:21191019 MGI:5693363 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025 		JBrowse link
G Pfn1 profilin 1 IMP RGD PMID:12740026 RGD:2324854 NCBI chr10:57,273,003...57,275,708
Ensembl chr10:57,273,005...57,275,708 		JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:11788598) RGD PMID:11788598 NCBI chr 1:162,549,222...162,671,962
Ensembl chr 1:162,549,420...162,662,170 		JBrowse link
positive regulation of viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:16680162) RGD PMID:16680162 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245 		JBrowse link
programmed cell death induced by symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (MGI:5009182|PMID:12426001) RGD PMID:12426001 MGI:5009182 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509 		JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO
IEA		 UniProtKB:P51636 (PMID:21047970)
GO_REF:0000107		 RGD
Ensembl		 PMID:21047970 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200 		JBrowse link
G Cav2 caveolin 2 involved_in ISO
IEA		 UniProtKB:O60840 (PMID:21047970)
GO_REF:0000107		 RGD
Ensembl		 PMID:21047970 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32221306), (PMID:32855215) RGD PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054 		JBrowse link
G LOC100294508 dyslexia susceptibility 2-like acts_upstream_of_or_within ISO MGI:5907241|MGI:5907242 (MGI:5750797|PMID:26814968) RGD PMID:26814968 MGI:5750797 NCBI chr 5:144,779,306...144,872,271
Ensembl chr 5:144,779,681...144,872,271 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877 		JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18343844), (PMID:32221306)		 Ensembl
RGD		 PMID:18343844 PMID:32221306 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO
ISS		 (PMID:21501828)
GO_REF:0000024		 RGD
UniProt		 PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757 		JBrowse link
G Grm1 glutamate metabotropic receptor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:4,753,141...5,165,859
Ensembl chr 1:4,753,144...5,165,859 		JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:2538243) RGD PMID:2538243 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059 		JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18385238)		 Ensembl
RGD		 PMID:18385238 GO_REF:0000107 NCBI chr11:74,040,846...74,052,179
Ensembl chr11:74,050,166...74,051,902 		JBrowse link
regulation of adhesion of symbiont to host epithelial cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sftpd surfactant protein D involved_in IEA
ISO		 GO_REF:0000107
(PMID:28228557)		 Ensembl
RGD		 PMID:28228557 GO_REF:0000107 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174 		JBrowse link
regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO
IEA		 (PMID:24625804)
GO_REF:0000107		 RGD
Ensembl		 PMID:24625804 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200 		JBrowse link
G Exoc2 exocyst complex component 2 involved_in ISO (PMID:20579884) RGD PMID:20579884 NCBI chr17:34,665,810...34,842,266
Ensembl chr17:34,665,872...34,842,266 		JBrowse link
G Exoc7 exocyst complex component 7 involved_in ISO (PMID:20579884) RGD PMID:20579884 NCBI chr10:105,242,152...105,259,795
Ensembl chr10:105,242,152...105,259,795 		JBrowse link
G Fuca2 alpha-L-fucosidase 2 involved_in ISO (PMID:19666478) RGD PMID:19666478 NCBI chr 1:7,658,919...7,673,663
Ensembl chr 1:7,658,890...7,673,683 		JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl6 C-X-C motif chemokine ligand 6 acts_upstream_of_or_within ISO MGI:4819800 (MGI:4819434|PMID:20643340) RGD PMID:20643340 MGI:4819434 NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407 		JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II involved_in ISO (PMID:22978549) RGD PMID:22978549 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598 		JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,236,437...40,545,502
Ensembl chr20:40,236,437...40,545,494 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO
IBA		 (PMID:11602758)
PMID:21873635		 RGD PMID:11602758, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585 		JBrowse link
G Trim14 tripartite motif-containing 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 5:62,128,941...62,154,424
Ensembl chr 5:62,128,941...62,153,786 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim27 tripartite motif-containing 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212 		JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:169,492,786...169,514,195
Ensembl chr 1:169,491,920...169,513,537 		JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:169,433,539...169,445,041
Ensembl chr 1:169,433,539...169,445,041 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242 		JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:167,835,773...167,849,880
Ensembl chr 1:167,835,647...167,849,834 		JBrowse link
G Triml1 tripartite motif family-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr16:52,169,426...52,177,548
Ensembl chr16:52,169,450...52,177,586 		JBrowse link
G Triml2 tripartite motif family-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr16:52,116,975...52,127,591
Ensembl chr16:52,116,975...52,127,591 		JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in IEA
ISO		 GO_REF:0000107
(MGI:3700400|PMID:16950491)		 Ensembl
RGD		 PMID:16950491 GO_REF:0000107 MGI:3700400 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374 		JBrowse link
G Ddx5 DEAD-box helicase 5 IMP RGD PMID:19224332 RGD:5128521 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3719397 (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183 		JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr19:25,318,863...25,318,970
Ensembl chr19:25,318,863...25,318,970 		JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr12:19,307,543...19,307,629
Ensembl chr12:19,307,543...19,307,629 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO
ISS		 (PMID:11250896)
GO_REF:0000024		 RGD
UniProt		 PMID:11250896 GO_REF:0000024 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443 		JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:22,706,906...22,707,648
Ensembl chr14:22,706,901...22,707,668 		JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 acts_upstream_of_or_within ISO MGI:3809768 (MGI:54738|PMID:293683) RGD PMID:293683 MGI:54738 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:21810281) RGD PMID:21810281 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681 		JBrowse link
regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IDA RGD PMID:9060691 RGD:11352687 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242 		JBrowse link
G Tsg101 tumor susceptibility 101 NOT
NOT|involved_in		 ISO (PMID:11595185) RGD PMID:11595185 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO
ISS		 (PMID:11641396)
GO_REF:0000024		 RGD
UniProt		 PMID:11641396 GO_REF:0000024 NCBI chr 7:144,121,688...144,126,860
Ensembl chr 7:144,121,744...144,126,857 		JBrowse link
release from viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) RGD PMID:20091349 NCBI chr 5:59,063,532...59,068,196
Ensembl chr 5:59,063,531...59,068,188 		JBrowse link
G Hcfc1 host cell factor C1 involved_in ISO (MGI:3687690|PMID:9990006) RGD PMID:9990006 MGI:3687690 NCBI chr  X:156,812,012...156,837,227
Ensembl chr  X:156,812,064...156,837,227 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575 		JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:14963118) RGD PMID:14963118 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931 		JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death acts_upstream_of_or_within ISO MGI:2675966 (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453 		JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in ISO (PMID:15231831) RGD PMID:15231831 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810 		JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISO (PMID:23290079) RGD PMID:23290079 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124 		JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IEP RGD PMID:9630249 RGD:10045968 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
IEA
ISO		 suppresses
GO_REF:0000107
(PMID:11296287)		 Ensembl
RGD		 PMID:11296287, PMID:12584308 GO_REF:0000107, RGD:633153 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978 		JBrowse link
G Insr insulin receptor involved_in ISO
IEA		 (PMID:17001305)
GO_REF:0000107		 RGD
Ensembl		 PMID:17001305 GO_REF:0000107 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414 		JBrowse link
G Mmp9 matrix metallopeptidase 9 IDA RGD PMID:20000122 RGD:2325807 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:16256070 RGD:7207780 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240 		JBrowse link
translocation of peptides or proteins into host cell cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcp1 t-complex 1 acts_upstream_of_or_within ISO (MGI:5492256|PMID:23716698) RGD PMID:23716698 MGI:5492256 NCBI chr 1:48,025,664...48,033,343
Ensembl chr 1:48,025,663...48,033,396 		JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:17701905) RGD PMID:17701905 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448 		JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:15256501) RGD PMID:15256501 NCBI chr 3:11,970,401...12,009,463
Ensembl chr 3:11,972,813...12,007,570 		JBrowse link
G Mvb12a multivesicular body subunit 12A involved_in ISO
IBA		 (PMID:18005716)
PMID:21873635		 RGD PMID:18005716, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr16:19,973,611...19,978,479
Ensembl chr16:19,973,636...19,978,478 		JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in ISO
IBA		 (PMID:18005716)
PMID:21873635		 RGD PMID:18005716, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 3:12,780,196...12,944,542
Ensembl chr 3:12,780,100...12,944,494 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in
acts_upstream_of		 ISO
IEA		 (PMID:15126635)
GO_REF:0000107		 RGD
Ensembl		 PMID:15126635 GO_REF:0000107 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) RGD PMID:18641129 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3850622|PMID:15256501)
(PMID:15126635), (PMID:18005716)		 UniProt
RGD		 PMID:15126635 PMID:15256501 PMID:18005716 GO_REF:0000024 MGI:3850622 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
G Vta1 vesicle trafficking 1 involved_in ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 1:8,830,405...8,878,191
Ensembl chr 1:8,830,411...8,878,244 		JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:62,923,620...62,926,150 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483), (PMID:23051622), (PMID:24878737) RGD PMID:16740483 PMID:23051622 PMID:24878737 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO UniProtKB:Q8WUM4|UniProtKB:Q9BY43 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:109,073,678...109,079,348
Ensembl chr10:109,073,678...109,079,348 		JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 NOT
NOT|involved_in		 ISO (PMID:23045692) RGD PMID:23045692 NCBI chr 9:44,472,364...44,483,723
Ensembl chr 9:44,472,365...44,560,837 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO UniProtKB:Q9H444 (PMID:24107264) RGD PMID:24107264 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO UniProtKB:O75351 (PMID:24107264) RGD PMID:24107264 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO UniProtKB:Q9UN37 (PMID:24107264) RGD PMID:24107264 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
viral capsid secondary envelopment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) RGD PMID:19129479 NCBI chr19:41,968,692...41,990,843
Ensembl chr19:41,968,705...41,990,843 		JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294)		 Ensembl
RGD		 PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761 		JBrowse link
G Bsg basigin (Ok blood group) IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753 		JBrowse link
G Cd209 CD209 molecule involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:2,406,879...2,413,324
Ensembl chr12:2,406,879...2,413,324 		JBrowse link
G Cd300lf Cd300 molecule-like family member F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:103,669,781...103,690,584
Ensembl chr10:103,670,028...103,687,425 		JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:47,125,156...47,153,557
Ensembl chr13:47,126,741...47,154,292 		JBrowse link
G Cd81 Cd81 molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:216,237,663...216,253,460
Ensembl chr 1:216,237,697...216,253,311 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) RGD PMID:1719235 MGI:49235 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345 		JBrowse link
G Cldn1 claudin 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416 		JBrowse link
G Cldn6 claudin 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:12,999,256...13,002,860
Ensembl chr10:13,000,090...13,002,862 		JBrowse link
G Cldn9 claudin 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:13,003,010...13,004,441
Ensembl chr10:13,003,011...13,004,441 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO
IEA		 (PMID:16051304), (PMID:24623090)
GO_REF:0000107		 RGD
Ensembl		 PMID:16051304 PMID:24623090 GO_REF:0000107 NCBI chr12:2,273,649...2,278,594
Ensembl chr12:2,273,941...2,277,169 		JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in IEA
ISO		 GO_REF:0000108
(PMID:24623090)		 GOC
RGD		 PMID:24623090 GO_REF:0000108 NCBI chr12:2,817,633...2,826,303
Ensembl chr12:2,816,065...2,826,378 		JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:68,810,330...68,819,921
Ensembl chr 4:68,808,359...68,819,928 		JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO		 GO_REF:0000107
(MGI:5640952|PMID:15831716)		 Ensembl
RGD		 PMID:15831716 GO_REF:0000107 MGI:5640952 NCBI chr15:46,316,741...46,337,613
Ensembl chr15:46,316,741...46,337,612 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) RGD PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
G Dag1 dystroglycan 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193 		JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:48,291,055...48,372,672
Ensembl chr 3:48,291,055...48,372,672 		JBrowse link
G Dppa1 developmental pluripotency associated 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,693,219...31,712,924
Ensembl chr10:31,693,219...31,712,924 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) RGD PMID:20202662 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO
ISS		 (PMID:21501828)
GO_REF:0000024		 RGD
UniProt		 PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757 		JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) RGD PMID:15650194 NCBI chr11:43,992,739...44,004,189
Ensembl chr11:44,001,579...44,003,664 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO
IEA		 (PMID:23029581)
GO_REF:0000107		 RGD
Ensembl		 PMID:23029581 GO_REF:0000107 NCBI chr 1:219,536,220...219,544,329
Ensembl chr 1:219,536,220...219,544,328 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,813,819...31,860,934
Ensembl chr10:31,813,814...31,848,379 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,332,834...116,337,522
Ensembl chr 8:116,332,796...116,335,435 		JBrowse link
G Hyal2 hyaluronidase 2 IDA facilitates RGD PMID:12584308 RGD:633153 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978 		JBrowse link
G Hyal3 hyaluronidase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,336,512...116,342,147
Ensembl chr 8:116,336,512...116,342,146 		JBrowse link
G Itgav integrin subunit alpha V involved_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 NOT
NOT|involved_in		 ISO (PMID:21810281) RGD PMID:21810281 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681 		JBrowse link
G LOC100359777 mCG12681-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,603,613...31,620,449
Ensembl chr10:31,603,613...31,620,443 		JBrowse link
G LOC689968 similar to kidney injury molecule 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,647,519...31,661,204
Ensembl chr10:31,647,898...31,661,344 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:12584355 RGD:1599797 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
G Nectin4 nectin cell adhesion molecule 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:89,755,665...89,774,185
Ensembl chr13:89,755,845...89,774,378 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)		 RGD PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO
IEA		 (PMID:33000221), (PMID:33082294)
GO_REF:0000107		 RGD
Ensembl		 PMID:33000221 PMID:33082294 GO_REF:0000107 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217 		JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:80,820,306...80,835,712
Ensembl chr 1:80,820,050...80,835,701 		JBrowse link