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Gene: Clec4m (C-type lectin domain family 4 member M) Rattus norvegicus
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Symbol: Clec4m
Name: C-type lectin domain family 4 member M
RGD ID: 1561466
Description: Predicted to have several functions, including (1->3)-beta-D-glucan binding activity; mannose binding activity; and virus receptor activity. Predicted to be involved in several processes, including detection of other organism; phagocytosis, recognition; and positive regulation of tumor necrosis factor production. Predicted to localize to external side of plasma membrane. Human ortholog(s) of this gene implicated in Coronavirus infectious disease (multiple); aspergillosis; dengue disease; human immunodeficiency virus infectious disease; and tuberculosis. Orthologous to several human genes including CD209 (CD209 molecule); PARTICIPATES IN measles pathway; phagocytosis pathway; tuberculosis pathway; INTERACTS WITH 1,2-dimethylhydrazine; aflatoxin B1; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Cd209b; CD209b antigen
Orthologs:
Homo sapiens (human) : CLEC4M (C-type lectin domain family 4 member M)  HGNC  Alliance
Mus musculus (house mouse) : Cd209b (CD209b antigen)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100978434 (C-type lectin domain family 4 member M)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0122,817,633 - 2,826,303 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,816,065 - 2,826,378 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,967,129 - 4,975,729 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,256,452 - 2,265,053 (+)NCBIRGSC3.4rn4RGSC3.4
Celera123,768,182 - 3,776,781 (-)NCBICelera
Cytogenetic Map12p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clec4m
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561466
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-11-03
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.