Slc20a2 (solute carrier family 20 member 2) - Rat Genome Database

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Gene: Slc20a2 (solute carrier family 20 member 2) Rattus norvegicus
Analyze
Symbol: Slc20a2
Name: solute carrier family 20 member 2
RGD ID: 3699
Description: Enables sodium:phosphate symporter activity. Predicted to be involved in phosphate ion transmembrane transport and positive regulation of bone mineralization. Located in apical plasma membrane and brush border membrane. Human ortholog(s) of this gene implicated in basal ganglia calcification. Orthologous to human SLC20A2 (solute carrier family 20 member 2); PARTICIPATES IN phosphate transport pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Ab1-188; gibbon ape leukemia virus receptor 2; Glvr2; phosphate transporter 2; Pit-2; RAM-1; Ram1; receptor for amphitropic viruses 1; receptor for amphotropic viruses 1; sodium-dependent phosphate transporter 2; solute carrier family 20 (phosphate transporter), member 2; solute carrier family 20, member 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81676,163,315 - 76,253,881 (-)NCBIGRCr8
mRatBN7.21669,460,850 - 69,551,418 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1669,460,462 - 69,521,711 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1674,734,553 - 74,825,121 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01678,166,068 - 78,256,210 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01673,415,254 - 73,505,396 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01674,318,287 - 74,408,030 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1674,317,899 - 74,408,030 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,949,883 - 74,042,911 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,948,917 - 74,174,391 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11673,949,185 - 74,174,656 (-)NCBI
Celera1667,353,947 - 67,441,733 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amitrole  (EXP)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
choline  (ISO)
cocaine  (EXP)
copper(II) sulfate  (ISO)
coumarin  (ISO)
cyclosporin A  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
ethanol  (EXP,ISO)
fipronil  (EXP)
flavonoids  (EXP)
flutamide  (EXP)
folic acid  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (EXP)
ketamine  (EXP)
leflunomide  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
menadione  (ISO)
methapyrilene  (EXP,ISO)
methimazole  (EXP)
methoxychlor  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
phenethyl isothiocyanate  (EXP)
phenylmercury acetate  (ISO)
phosphonoformic acid  (ISO)
pirinixic acid  (ISO)
propiconazole  (EXP,ISO)
rifampicin  (ISO)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium atom  (ISO)
streptozocin  (ISO)
succimer  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
triclosan  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zidovudine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Cell-surface receptors for gibbon ape leukemia virus and amphotropic murine retrovirus are inducible sodium-dependent phosphate symporters. Kavanaugh MP, etal., Proc Natl Acad Sci U S A. 1994 Jul 19;91(15):7071-5. doi: 10.1073/pnas.91.15.7071.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Cloning of the cellular receptor for amphotropic murine retroviruses reveals homology to that for gibbon ape leukemia virus. Miller DG, etal., Proc Natl Acad Sci U S A 1994 Jan 4;91(1):78-82.
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
8. Acute parathyroid hormone differentially regulates renal brush border membrane phosphate cotransporters. Picard N, etal., Pflugers Arch. 2010 Aug;460(3):677-87. doi: 10.1007/s00424-010-0841-1. Epub 2010 Jun 5.
9. Phosphate handling: new genes, new molecules. Prie D, etal., Horm Res Paediatr. 2011;76 Suppl 1:71-5. doi: 10.1159/000329175. Epub 2011 Jul 21.
10. GOA pipeline RGD automated data pipeline
11. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
13. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
14. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
15. The Na+-Pi cotransporter PiT-2 (SLC20A2) is expressed in the apical membrane of rat renal proximal tubules and regulated by dietary Pi. Villa-Bellosta R, etal., Am J Physiol Renal Physiol. 2009 Apr;296(4):F691-9. doi: 10.1152/ajprenal.90623.2008. Epub 2008 Dec 10.
Additional References at PubMed
PMID:7966619   PMID:14584042   PMID:15564340   PMID:17322102   PMID:19199708   PMID:19493963   PMID:19841935   PMID:22871113  


Genomics

Comparative Map Data
Slc20a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81676,163,315 - 76,253,881 (-)NCBIGRCr8
mRatBN7.21669,460,850 - 69,551,418 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1669,460,462 - 69,521,711 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1674,734,553 - 74,825,121 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01678,166,068 - 78,256,210 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01673,415,254 - 73,505,396 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01674,318,287 - 74,408,030 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1674,317,899 - 74,408,030 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,949,883 - 74,042,911 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,948,917 - 74,174,391 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11673,949,185 - 74,174,656 (-)NCBI
Celera1667,353,947 - 67,441,733 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
SLC20A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38842,416,475 - 42,541,954 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl842,416,475 - 42,541,926 (-)EnsemblGRCh38hg38GRCh38
GRCh37842,273,993 - 42,397,097 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36842,393,150 - 42,516,225 (-)NCBINCBI36Build 36hg18NCBI36
Build 34842,393,149 - 42,516,225NCBI
Celera841,218,715 - 41,343,998 (-)NCBICelera
Cytogenetic Map8p11.21ENTREZGENE
HuRef840,797,207 - 40,919,889 (-)NCBIHuRef
CHM1_1842,320,887 - 42,444,252 (-)NCBICHM1_1
T2T-CHM13v2.0842,686,790 - 42,810,126 (-)NCBIT2T-CHM13v2.0
Slc20a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39822,966,771 - 23,059,632 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl822,966,804 - 23,059,628 (+)EnsemblGRCm39 Ensembl
GRCm38822,476,700 - 22,569,616 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl822,476,788 - 22,569,612 (+)EnsemblGRCm38mm10GRCm38
MGSCv37823,587,172 - 23,680,088 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36823,942,327 - 24,035,157 (+)NCBIMGSCv36mm8
Celera823,971,023 - 24,060,137 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map811.42NCBI
Slc20a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955536392,525 - 495,265 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955536392,341 - 496,616 (+)NCBIChiLan1.0ChiLan1.0
SLC20A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2760,871,417 - 60,995,324 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1836,588,364 - 36,711,455 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0841,663,200 - 41,786,314 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1839,107,925 - 39,190,708 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl839,109,265 - 39,162,456 (-)Ensemblpanpan1.1panPan2
SLC20A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11623,165,347 - 23,268,115 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1623,200,798 - 23,267,775 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1623,669,359 - 23,772,731 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01624,915,578 - 25,016,775 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1624,916,033 - 25,016,852 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11623,284,583 - 23,387,961 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01623,849,676 - 23,950,861 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01623,900,978 - 24,001,628 (+)NCBIUU_Cfam_GSD_1.0
Slc20a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494346,220,778 - 46,328,780 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936785181,127 - 285,209 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936785177,134 - 285,467 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC20A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1711,435,442 - 11,486,581 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11711,435,435 - 11,549,623 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21712,830,531 - 13,018,839 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC20A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1840,413,070 - 40,535,002 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl840,412,958 - 40,469,896 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660521,238,155 - 1,366,333 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc20a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624780779,900 - 832,137 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624780725,992 - 833,419 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc20a2
541 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:369
Count of miRNA genes:211
Interacting mature miRNAs:244
Transcripts:ENSRNOT00000026418
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
1298527Arunc2Aerobic running capacity QTL 22.9exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)166853271675029966Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat

Markers in Region
D16Got73  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01673,970,063 - 73,970,259UniSTSRnor5.0
Celera1667,371,631 - 67,371,815UniSTS
RH 3.4 Map16663.41UniSTS
RH 3.4 Map16663.41RGD
RH 2.0 Map16784.3RGD
Cytogenetic Map16q12.5UniSTS
RH128687  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21669,460,948 - 69,461,165 (+)MAPPERmRatBN7.2
Rnor_6.01674,318,386 - 74,318,602NCBIRnor6.0
Rnor_5.01673,949,977 - 73,950,193UniSTSRnor5.0
RGSC_v3.41673,949,011 - 73,949,227UniSTSRGSC3.4
Celera1667,354,041 - 67,354,257UniSTS
RH 3.4 Map16635.1UniSTS
Cytogenetic Map16q12.5UniSTS
RH130609  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21669,543,759 - 69,543,939 (+)MAPPERmRatBN7.2
Rnor_6.01674,400,368 - 74,400,547NCBIRnor6.0
Rnor_5.01674,035,249 - 74,035,428UniSTSRnor5.0
Celera1667,434,075 - 67,434,254UniSTS
RH 3.4 Map16660.9UniSTS
Cytogenetic Map16q12.5UniSTS
RH137390  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21669,489,878 - 69,490,053 (+)MAPPERmRatBN7.2
Rnor_6.01674,345,480 - 74,345,654NCBIRnor6.0
Rnor_5.01673,978,747 - 73,978,921UniSTSRnor5.0
Celera1667,380,302 - 67,380,476UniSTS
RH 3.4 Map16635.0UniSTS
Cytogenetic Map16q12.5UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000026418   ⟹   ENSRNOP00000026418
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1669,460,867 - 69,521,711 (-)Ensembl
Rnor_6.0 Ensembl1674,318,296 - 74,408,030 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000084330   ⟹   ENSRNOP00000074540
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1669,460,462 - 69,471,521 (-)Ensembl
Rnor_6.0 Ensembl1674,317,899 - 74,330,911 (-)Ensembl
RefSeq Acc Id: NM_017223   ⟹   NP_058919
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81676,163,315 - 76,253,881 (-)NCBI
mRatBN7.21669,460,855 - 69,551,418 (-)NCBI
Rnor_6.01674,318,292 - 74,408,030 (-)NCBI
Rnor_5.01673,949,883 - 74,042,911 (-)NCBI
RGSC_v3.41673,948,917 - 74,174,391 (-)RGD
Celera1667,353,947 - 67,441,733 (-)RGD
Sequence:
RefSeq Acc Id: XM_008771351   ⟹   XP_008769573
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81676,163,315 - 76,226,696 (-)NCBI
mRatBN7.21669,460,850 - 69,521,706 (-)NCBI
Rnor_6.01674,318,287 - 74,377,622 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008771352   ⟹   XP_008769574
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81676,163,315 - 76,226,696 (-)NCBI
mRatBN7.21669,460,850 - 69,522,463 (-)NCBI
Rnor_6.01674,318,287 - 74,378,421 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017600054   ⟹   XP_017455543
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81676,163,315 - 76,223,739 (-)NCBI
mRatBN7.21669,460,850 - 69,521,257 (-)NCBI
Rnor_6.01674,318,287 - 74,377,262 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039094428   ⟹   XP_038950356
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81676,163,315 - 76,240,183 (-)NCBI
mRatBN7.21669,460,850 - 69,537,515 (-)NCBI
RefSeq Acc Id: NP_058919   ⟸   NM_017223
- UniProtKB: Q63488 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_008769574   ⟸   XM_008771352
- Peptide Label: isoform X1
- UniProtKB: Q63488 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_008769573   ⟸   XM_008771351
- Peptide Label: isoform X1
- UniProtKB: Q63488 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017455543   ⟸   XM_017600054
- Peptide Label: isoform X1
- UniProtKB: Q63488 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026418   ⟸   ENSRNOT00000026418
Ensembl Acc Id: ENSRNOP00000074540   ⟸   ENSRNOT00000084330
RefSeq Acc Id: XP_038950356   ⟸   XM_039094428
- Peptide Label: isoform X1
- UniProtKB: Q63488 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q63488-F1-model_v2 AlphaFold Q63488 1-656 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700188
Promoter ID:EPDNEW_R10711
Type:multiple initiation site
Name:Slc20a2_1
Description:solute carrier family 20 member 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01674,408,045 - 74,408,105EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:3699 AgrOrtholog
BioCyc Gene G2FUF-10876 BioCyc
Ensembl Genes ENSRNOG00000019490 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055007711 UniProtKB/Swiss-Prot
  ENSRNOG00060028072 UniProtKB/Swiss-Prot
  ENSRNOG00065008781 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000026418.8 UniProtKB/Swiss-Prot
  ENSRNOT00000084330.2 UniProtKB/TrEMBL
  ENSRNOT00055012939 UniProtKB/Swiss-Prot
  ENSRNOT00060048842 UniProtKB/Swiss-Prot
  ENSRNOT00065014003 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7103640 IMAGE-MGC_LOAD
InterPro Phos_transporter UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:29502 UniProtKB/Swiss-Prot
MGC_CLONE MGC:91730 IMAGE-MGC_LOAD
NCBI Gene 29502 ENTREZGENE
PANTHER PTHR11101 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SODIUM-DEPENDENT PHOSPHATE TRANSPORTER 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PHO4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc20a2 PhenoGen
RatGTEx ENSRNOG00000019490 RatGTEx
  ENSRNOG00055007711 RatGTEx
  ENSRNOG00060028072 RatGTEx
  ENSRNOG00065008781 RatGTEx
TIGR TC229822
UniProt A0A0G2K8B2_RAT UniProtKB/TrEMBL
  A6IW69_RAT UniProtKB/TrEMBL
  Q63488 ENTREZGENE
  Q7TP93_RAT UniProtKB/TrEMBL
  S20A2_RAT UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-09 Slc20a2  solute carrier family 20 member 2  Slc20a2  solute carrier family 20 (phosphate transporter), member 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-19 Slc20a2  solute carrier family 20 (phosphate transporter), member 2  Slc20a2  solute carrier family 20, member 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Slc20a2  solute carrier family 20, member 2      Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_function acts as a carrier for amphotropic murine retroviruses 70008
gene_homology homologous to the gibbon ape leukemia virus receptor 70008