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ONTOLOGY REPORT - ANNOTATIONS

Term:viral life cycle
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Accession:GO:0019058 term browser browse the term
Definition:A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
Synonyms:narrow_synonym: viral assembly, maturation, egress, and release
 related_synonym: lytic viral life cycle;   viral infectious cycle;   viral replication
 alt_id: GO:0019067

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viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA		 (PMID:8940009)
GO_REF:0000107		 RGD
Ensembl		 PMID:8940009 GO_REF:0000107 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:8940009)
(MGI:3799615|PMID:8940009)		 RGD PMID:8940009 MGI:3799615 NCBI chr 1:236,031,988...236,313,858
Ensembl chr 1:236,031,988...236,313,858 		JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in IBA
ISO		 PMID:21873635
(PMID:12857889)		 RGD PMID:12857889, PMID:21873635 RGD:13792537 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109 		JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 involved_in IBA
ISO		 PMID:21873635
(PMID:12915581)		 RGD PMID:12915581, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585 		JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615 		JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:18562523) RGD PMID:16081529 PMID:18562523 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21501828)		 UniProt
RGD		 PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO
IEA
ISS		 (PMID:11296287)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11296287 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in IBA
ISO		 PMID:21873635
(PMID:12915581)		 RGD PMID:12915581, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585 		JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) RGD PMID:25540360 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090 		JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27777077) RGD PMID:27777077 NCBI chr 6:127,327,959...127,334,430
Ensembl chr 6:127,327,959...127,334,428 		JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine-rich repeat protein 2 involved_in ISO (PMID:15893726) RGD PMID:15893726 NCBI chr 8:122,240,393...122,290,439
Ensembl chr 8:122,243,016...122,311,431 		JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO
IEA		 (PMID:24514761)
GO_REF:0000107		 RGD
Ensembl		 PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314 		JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl12 chemokine (C-C motif) ligand 12 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:69,476,866...69,478,416
Ensembl chr10:69,476,775...69,478,462 		JBrowse link
G Ccnk cyclin K involved_in ISO (PMID:21555514) RGD PMID:21555514 NCBI chr 6:132,090,235...132,113,560
Ensembl chr 6:132,090,218...132,113,557 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3053078 (MGI:55926|PMID:6327825) RGD PMID:6327825 MGI:55926 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:24380861) RGD PMID:24380861 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5700304|PMID:16601681)		 UniProt
RGD		 PMID:16601681 GO_REF:0000024 MGI:5700304 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:25244949) RGD PMID:25244949 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Vapa VAMP associated protein A involved_in ISO
IEA		 (PMID:19515777)
GO_REF:0000107		 RGD
Ensembl		 PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:23355615) RGD PMID:23355615 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165 		JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO
ISS		 (PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5437427|PMID:20686043), (MGI:5448513|PMID:21919738)
GO_REF:0000024		 RGD
UniProt		 PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353 		JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950 		JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668 		JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671 		JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in IBA
ISO		 PMID:21873635
(PMID:18779051), (PMID:21835787)		 RGD PMID:18779051 PMID:21835787, PMID:21873635 RGD:13792537 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:17005673)
GO_REF:0000024		 RGD
UniProt		 PMID:17005673 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) RGD PMID:18774950 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899 		JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:29211708)
(MGI:6271895|PMID:29728365)		 RGD PMID:29211708 PMID:29728365 MGI:6271895 NCBI chr14:83,889,138...83,930,263
Ensembl chr14:83,889,089...83,930,522 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO
ISS		 (PMID:29211708)
GO_REF:0000024		 RGD
UniProt		 PMID:29211708 GO_REF:0000024 NCBI chr15:36,918,843...36,946,712
Ensembl chr15:36,918,843...36,946,708 		JBrowse link
G Resf1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) RGD PMID:29728365 MGI:6271895 NCBI chr 4:183,879,177...183,905,807
Ensembl chr 4:183,896,303...183,905,297 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) RGD PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr 2:196,495,867...196,527,412
Ensembl chr 2:196,495,867...196,527,127 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:29211708) RGD PMID:29211708 NCBI chr16:3,050,506...3,108,168
Ensembl chr16:3,051,449...3,105,531 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in
acts_upstream_of_or_within		 ISO (MGI:5440670|PMID:20164836)
MGI:2143362 (MGI:3842857|PMID:19270682)		 RGD PMID:19270682 PMID:20164836 MGI:3842857 MGI:5440670 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043 		JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Apcs amyloid P component, serum involved_in IEA
ISO		 GO_REF:0000107
(PMID:23544079)		 Ensembl
RGD		 PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849 		JBrowse link
G Ciita class II, major histocompatibility complex, transactivator involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608 		JBrowse link
G Fcna ficolin A involved_in ISO (PMID:22851708) RGD PMID:22851708 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272 		JBrowse link
G Fcnb ficolin B involved_in ISO (PMID:22851708) RGD PMID:22851708 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284 		JBrowse link
G Gsn gelsolin involved_in ISO (PMID:23575248) RGD PMID:23575248 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5780029|PMID:25738301)
(MGI:5437420|PMID:21253575)		 RGD PMID:21253575 PMID:25738301, PMID:21873635 MGI:5437420 MGI:5780029, RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in IBA
ISO		 PMID:21873635
(PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656)
(MGI:5437420|PMID:21253575)		 RGD PMID:21253575 PMID:23358889 PMID:26354436 PMID:33563656, PMID:21873635 MGI:5437420, RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in IBA
ISO
ISS		 PMID:21873635
(PMID:20943977), (PMID:21253575), (PMID:23358889), (PMID:26354436)
GO_REF:0000024
(MGI:5437420|PMID:21253575)		 RGD
UniProt		 PMID:20943977 PMID:21253575 PMID:23358889 PMID:26354436, PMID:21873635 GO_REF:0000024 MGI:5437420, RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901 		JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222 		JBrowse link
G Ly6e lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)		 RGD PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr 7:116,355,426...116,359,862
Ensembl chr 7:116,355,698...116,359,862 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IMP RGD PMID:22850678 RGD:8693392 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489 		JBrowse link
G Nbn nibrin IMP RGD PMID:22850678 RGD:8693392 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864 		JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653 		JBrowse link
G Rad50 RAD50 double strand break repair protein IMP RGD PMID:22850678 RGD:8693392 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142 		JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390 		JBrowse link
G Trim10 tripartite motif-containing 10 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr20:2,182,945...2,191,640
Ensembl chr20:2,182,941...2,191,640 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IEA		 (PMID:18248090)
GO_REF:0000107		 RGD
Ensembl		 PMID:18248090 GO_REF:0000107 NCBI chr20:2,201,685...2,224,481
Ensembl chr20:2,201,683...2,224,463 		JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996
G Trim59 tripartite motif-containing 59 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 2:165,629,903...165,641,751
Ensembl chr 2:165,629,918...165,641,573 		JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694 		JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within ISO MGI:4941203 (MGI:4939544|PMID:21173229) RGD PMID:21173229 MGI:4939544 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236 		JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (MGI:5486557|PMID:16378963) RGD PMID:16378963 MGI:5486557 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542 		JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) RGD PMID:18005698 NCBI chr 1:220,744,195...220,746,224
Ensembl chr 1:220,744,195...220,746,224 		JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
(PMID:20943977)		 UniProt
RGD		 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 MGI:5437405 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in ISO
IEA
ISS		 (PMID:19189853), (PMID:19840259)
GO_REF:0000107
(MGI:5487533|PMID:20038207)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19189853 PMID:19840259 PMID:20038207 GO_REF:0000024 GO_REF:0000107 MGI:5487533 NCBI chr 6:1,428,845...1,466,193
Ensembl chr 6:1,428,834...1,466,201 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) RGD PMID:23093934 NCBI chr 1:229,003,778...229,019,532
Ensembl chr 1:229,003,961...229,019,527 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA		 (PMID:21253575)
PMID:21873635		 RGD PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO
IBA		 (PMID:20943977), (PMID:21253575)
PMID:21873635		 RGD PMID:20943977 PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901 		JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:19008854) RGD PMID:19008854 NCBI chr 5:106,865,192...106,865,746
Ensembl chr 5:106,865,192...106,865,746 		JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4867319|PMID:21123651)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21123651 GO_REF:0000024 GO_REF:0000107 MGI:4867319 NCBI chr 8:22,402,877...22,440,984
Ensembl chr 8:22,402,890...22,440,885 		JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in ISO (PMID:19357168) RGD PMID:19357168 NCBI chr 5:173,624,862...173,629,124
Ensembl chr 5:173,624,310...173,626,248 		JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in IBA
ISO		 PMID:21873635
(PMID:21036379)		 RGD PMID:21036379, PMID:21873635 RGD:13792537 NCBI chr 1:140,602,553...140,608,892
Ensembl chr 1:140,601,791...140,608,946 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) RGD PMID:25193851 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:20451243)
(MGI:4881394|PMID:20451243)		 RGD PMID:20451243 MGI:4881394 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567 		JBrowse link
G Mx1 MX dynamin like GTPase 1 involved_in ISO (PMID:14687945), (PMID:15047845), (PMID:16202617) RGD PMID:14687945 PMID:15047845 PMID:16202617 NCBI chr11:37,891,150...37,916,775
Ensembl chr11:37,891,156...37,914,983 		JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO
IEA		 (PMID:24500530)
GO_REF:0000107		 RGD
Ensembl		 PMID:24500530 GO_REF:0000107 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950 		JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in ISO
IEA		 (PMID:31133753)
GO_REF:0000107		 RGD
Ensembl		 PMID:31133753 GO_REF:0000107 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964 		JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in IBA
ISO		 PMID:21873635
(PMID:19923450), (PMID:23196181)
(PMID:20844035)
(PMID:18931074)		 RGD PMID:18931074 PMID:19923450 PMID:20844035 PMID:23196181, PMID:21873635 RGD:13792537 NCBI chr12:41,200,680...41,211,393
Ensembl chr12:41,200,718...41,211,909 		JBrowse link
G Oas1b 2-5 oligoadenylate synthetase 1B involved_in IBA
ISS		 PMID:21873635
GO_REF:0000024		 UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:41,255,762...41,266,430
Ensembl chr12:41,227,825...41,307,352 		JBrowse link
G Oas1d 2'-5' oligoadenylate synthetase 1D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,179,477...41,188,796
Ensembl chr12:41,179,477...41,188,796 		JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,281,479...41,290,500
Ensembl chr12:41,281,559...41,290,497 		JBrowse link
G Oas1g 2'-5' oligoadenylate synthetase 1G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:42,343,103...42,355,139
Ensembl chr12:42,343,123...42,355,131 		JBrowse link
G Oas1h 2 ' -5 ' oligoadenylate synthetase 1H involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,214,587...41,224,254
Ensembl chr12:41,214,587...41,224,254 		JBrowse link
G Oas1i 2 ' -5 ' oligoadenylate synthetase 1I involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,155,489...41,167,501
Ensembl chr12:41,155,497...41,167,505 		JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,341,417...41,363,124
Ensembl chr12:41,340,815...41,363,161 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IBA
ISO
IEA		 PMID:21873635
(PMID:19056102), (PMID:19923450), (PMID:23196181)
GO_REF:0000107		 RGD
Ensembl		 PMID:19056102 PMID:19923450 PMID:23196181, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:41,313,081...41,368,217
Ensembl chr12:41,316,764...41,336,562 		JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like involved_in ISO
IBA		 (PMID:18931074), (PMID:20074559)
PMID:21873635		 RGD PMID:18931074 PMID:20074559, PMID:21873635 RGD:13792537 NCBI chr12:47,444,138...47,456,680
Ensembl chr12:47,444,104...47,456,894 		JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:47,470,074...47,483,131
Ensembl chr12:47,469,598...47,482,961 		JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:22176891) RGD PMID:22176891 NCBI chr 7:117,291,592...117,300,878
Ensembl chr 7:117,291,877...117,300,662 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5284800|PMID:15308695)
GO_REF:0000024
(PMID:15308695)		 Ensembl
RGD
UniProt		 PMID:15308695 GO_REF:0000024 GO_REF:0000107 MGI:5284800 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G Rnasel ribonuclease L involved_in IBA
ISO		 PMID:21873635
(PMID:19923450), (PMID:23196181)		 RGD PMID:19923450 PMID:23196181, PMID:21873635 RGD:13792537 NCBI chr13:71,188,712...71,202,636
Ensembl chr13:71,192,142...71,202,625 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5431072|PMID:21880757)
(PMID:21957124)		 Ensembl
RGD		 PMID:21880757 PMID:21957124 GO_REF:0000107 MGI:5431072 NCBI chr 6:45,655,947...45,669,083
Ensembl chr 6:45,655,954...45,669,148 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO
ISS
IEA		 (PMID:26735137)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:26735137 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:21,890,214...21,896,045
Ensembl chr 8:21,890,319...21,896,031 		JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (PMID:19333378) RGD PMID:19333378 NCBI chr 3:160,799,979...160,802,228
Ensembl chr 3:160,799,981...160,802,433 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr20:5,829,412...5,865,877
Ensembl chr20:5,831,119...5,865,854 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr 4:7,994,025...8,187,455
Ensembl chr 4:8,066,737...8,185,935 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218)
(MGI:5645191|PMID:24882218)		 RGD PMID:24882218 MGI:5645191 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO
IEA
IDA		 (PMID:21102435)
GO_REF:0000107
PMID:21876179
(PMID:21876179)		 RGD
Ensembl		 PMID:21102435 PMID:21876179, PMID:21876179 GO_REF:0000107, RGD:8554819 NCBI chr 4:66,012,111...66,062,160
Ensembl chr 4:66,011,915...66,062,089 		JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19207730), (PMID:22347431) RGD PMID:19207730 PMID:22347431 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443 		JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483) RGD PMID:16740483 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:112,019,897...112,121,980
Ensembl chr  X:112,020,646...112,121,943 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030 		JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr15:41,897,191...41,936,545
Ensembl chr15:41,927,241...41,935,718 		JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IEA		 (PMID:18248090)
GO_REF:0000107		 RGD
Ensembl		 PMID:18248090 GO_REF:0000107 NCBI chr20:2,201,685...2,224,481
Ensembl chr20:2,201,683...2,224,463 		JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451 		JBrowse link
G Trim35 tripartite motif-containing 35 involved_in ISO
IEA		 (PMID:18248090)
GO_REF:0000107		 RGD
Ensembl		 PMID:18248090 GO_REF:0000107 NCBI chr15:42,960,255...42,976,798
Ensembl chr15:42,960,307...42,976,792 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr 1:266,255,797...266,270,694
Ensembl chr 1:266,255,797...266,270,694 		JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5552992|PMID:24550300)		 RGD PMID:24550300, PMID:21873635 MGI:5552992, RGD:13792537 NCBI chr 9:94,879,876...94,915,231
Ensembl chr 9:94,879,745...94,915,228 		JBrowse link
G Atg16l2 autophagy related 16-like 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5552992|PMID:24550300)		 RGD PMID:24550300, PMID:21873635 MGI:5552992, RGD:13792537 NCBI chr 1:166,401,271...166,415,078
Ensembl chr 1:166,401,271...166,413,564 		JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:5552992|PMID:24550300)		 Ensembl
RGD		 PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124 		JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:5787727 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575 		JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562 		JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO
IEA		 (PMID:19515777)
GO_REF:0000107		 RGD
Ensembl		 PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
G Ythdc2 YTH domain containing 2 involved_in ISO (PMID:21559518) RGD PMID:21559518 NCBI chr 1:182,072,386...182,141,399
Ensembl chr 1:182,085,899...182,140,570 		JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO
IEA		 (PMID:25556234)
GO_REF:0000107		 RGD
Ensembl		 PMID:25556234 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638 		JBrowse link
G LOC100911237 zinc finger protein 420-like involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase involved_in IEA
ISO		 GO_REF:0000107
(PMID:23861867)		 Ensembl
RGD		 PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848 		JBrowse link
G Vapa VAMP associated protein A involved_in IEA
ISO		 GO_REF:0000107
(PMID:19515777)		 Ensembl
RGD		 PMID:19515777 GO_REF:0000107 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24514761)		 Ensembl
RGD		 PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314 		JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Top2a DNA topoisomerase II alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:16712776)		 Ensembl
RGD		 PMID:16712776 GO_REF:0000107 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:16712776) RGD PMID:16712776 NCBI chr15:10,262,972...10,319,741
Ensembl chr15:10,262,651...10,320,233 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185 PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:17940959), (PMID:24878737) RGD PMID:17940959 PMID:24878737 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753 		JBrowse link
G Cd4 Cd4 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849 		JBrowse link
G Lgals1 galectin 1 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr 7:120,153,184...120,156,290
Ensembl chr 7:120,153,184...120,156,289 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190 		JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) RGD PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr11:38,063,914...38,103,406
Ensembl chr11:38,063,915...38,103,290 		JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in ISO (PMID:32404436) RGD PMID:32404436 NCBI chr 8:49,469,804...49,503,304
Ensembl chr 8:49,469,503...49,502,647 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 RGD PMID:18248090 MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:5545996 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:43,600,006...43,607,879 JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5447606|PMID:18362360)
GO_REF:0000107
(PMID:18362360), (PMID:19651874)		 UniProt
RGD
Ensembl		 PMID:18362360 PMID:19651874 GO_REF:0000024 GO_REF:0000107 MGI:5447606 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236 		JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21289159)		 UniProt
Ensembl
RGD		 PMID:21289159 GO_REF:0000024 GO_REF:0000107 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:23386060) RGD PMID:23386060 NCBI chr16:54,899,452...54,918,616
Ensembl chr16:54,899,452...54,918,613 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA		 (PMID:23137809)
GO_REF:0000107		 RGD
Ensembl		 PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:20862261) RGD PMID:20862261 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995 		JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISO (PMID:26567527) RGD PMID:26567527 NCBI chr12:24,365,941...24,438,088
Ensembl chr12:24,367,199...24,438,019 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) RGD PMID:21191019 MGI:5693363 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:53,750,470...53,870,288
Ensembl chr13:53,750,473...53,870,428 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15231837)		 Ensembl
RGD		 PMID:15231837 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253 		JBrowse link
G Pkn2 protein kinase N2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15364941)		 Ensembl
RGD		 PMID:15364941 GO_REF:0000107 NCBI chr 2:248,735,699...248,840,735
Ensembl chr 2:248,735,699...248,840,735 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO (PMID:22479552) RGD PMID:22479552 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443 		JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 2:178,354,830...178,366,843
Ensembl chr 2:178,354,890...178,366,685 		JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:140,822,141...140,835,244
Ensembl chr 5:140,822,141...140,834,959 		JBrowse link
G Ppih peptidylprolyl isomerase H involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:138,343,934...138,361,743
Ensembl chr 5:138,352,916...138,361,702 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:20614012) RGD PMID:20614012 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr20:5,829,412...5,865,877
Ensembl chr20:5,831,119...5,865,854 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr 4:7,994,025...8,187,455
Ensembl chr 4:8,066,737...8,185,935 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO
ISS		 (PMID:11641396)
GO_REF:0000024		 RGD
UniProt		 PMID:11641396 GO_REF:0000024 NCBI chr 7:144,121,688...144,126,860
Ensembl chr 7:144,121,744...144,126,857 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO (PMID:31849860) RGD PMID:31849860 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544 		JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) RGD PMID:22539786 MGI:5441682 NCBI chr17:43,600,006...43,607,879 JBrowse link
G Vapb VAMP associated protein B and C involved_in ISS
ISO		 GO_REF:0000024
(PMID:16227268)		 UniProt
RGD		 PMID:16227268 GO_REF:0000024 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647 		JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761 		JBrowse link
G Cd209 CD209 molecule involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:2,406,879...2,413,324
Ensembl chr12:2,406,879...2,413,324 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:2,273,649...2,278,594
Ensembl chr12:2,273,941...2,277,169 		JBrowse link
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:22673088)		 Ensembl
RGD		 PMID:22673088 GO_REF:0000107 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185), (PMID:16193069), (PMID:17940959) RGD PMID:11595185 PMID:16193069 PMID:17940959 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:16193069) RGD PMID:16193069 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3|UniProtKB:Q9Y3E7 (PMID:14505570), (PMID:23051622) RGD PMID:14505570 PMID:23051622 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633|UniProtKB:Q9Y3E7 (PMID:23051622) RGD PMID:23051622 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO UniProtKB:O43633|UniProtKB:Q9UQN3 (PMID:14505570), (PMID:23051622) RGD PMID:14505570 PMID:23051622 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA
ISO		 GO_REF:0000107
(PMID:14505570)		 Ensembl
RGD		 PMID:14505570 GO_REF:0000107 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA		 (PMID:23137809)
GO_REF:0000107		 RGD
Ensembl		 PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185 PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) RGD PMID:11595185 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570) RGD PMID:14505570 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P51636 (PMID:21047970)		 Ensembl
RGD		 PMID:21047970 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200 		JBrowse link
G Cav2 caveolin 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:O60840 (PMID:21047970)		 Ensembl
RGD		 PMID:21047970 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32221306), (PMID:32855215) RGD PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054 		JBrowse link
G LOC100294508 dyslexia susceptibility 2-like acts_upstream_of_or_within ISO MGI:5907241|MGI:5907242 (MGI:5750797|PMID:26814968) RGD PMID:26814968 MGI:5750797 NCBI chr 5:144,779,306...144,872,271
Ensembl chr 5:144,779,681...144,872,271 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877 		JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18343844), (PMID:32221306)		 Ensembl
RGD		 PMID:18343844 PMID:32221306 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO
ISS		 (PMID:21501828)
GO_REF:0000024		 RGD
UniProt		 PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757 		JBrowse link
G Grm1 glutamate metabotropic receptor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:4,753,141...5,165,859
Ensembl chr 1:4,753,144...5,165,859 		JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:2538243) RGD PMID:2538243 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059 		JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18385238)		 Ensembl
RGD		 PMID:18385238 GO_REF:0000107 NCBI chr11:74,040,846...74,052,179
Ensembl chr11:74,050,166...74,051,902 		JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II involved_in ISO (PMID:22978549) RGD PMID:22978549 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598 		JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,236,437...40,545,502
Ensembl chr20:40,236,437...40,545,494 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO
IBA		 (PMID:11602758)
PMID:21873635		 RGD PMID:11602758, PMID:21873635 RGD:13792537 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585 		JBrowse link
G Trim14 tripartite motif-containing 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:62,128,941...62,154,424
Ensembl chr 5:62,128,941...62,153,786 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim27 tripartite motif-containing 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:45,613,863...45,626,212
Ensembl chr17:45,613,864...45,626,212 		JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,492,786...169,514,195
Ensembl chr 1:169,491,920...169,513,537 		JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,433,539...169,445,041
Ensembl chr 1:169,433,539...169,445,041 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242 		JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,835,773...167,849,880
Ensembl chr 1:167,835,647...167,849,834 		JBrowse link
G Triml1 tripartite motif family-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:52,169,426...52,177,548
Ensembl chr16:52,169,450...52,177,586 		JBrowse link
G Triml2 tripartite motif family-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:52,116,975...52,127,591
Ensembl chr16:52,116,975...52,127,591 		JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in IEA
ISO		 GO_REF:0000107
(MGI:3700400|PMID:16950491)		 Ensembl
RGD		 PMID:16950491 GO_REF:0000107 MGI:3700400 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374 		JBrowse link
G Ddx5 DEAD-box helicase 5 IMP RGD PMID:19224332 RGD:5128521 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3719397 (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183 		JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr19:25,318,863...25,318,970
Ensembl chr19:25,318,863...25,318,970 		JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) RGD PMID:17613256 MGI:3718936 NCBI chr12:19,307,543...19,307,629
Ensembl chr12:19,307,543...19,307,629 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO
ISS		 (PMID:11250896)
GO_REF:0000024		 RGD
UniProt		 PMID:11250896 GO_REF:0000024 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443 		JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:22,706,906...22,707,648
Ensembl chr14:22,706,901...22,707,668 		JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 acts_upstream_of_or_within ISO MGI:3809768 (MGI:54738|PMID:293683) RGD PMID:293683 MGI:54738 NCBI chr 7:121,108,108...121,128,346
Ensembl chr 7:121,109,241...121,128,542 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:21810281) RGD PMID:21810281 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681 		JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:76,343,847...76,362,159
Ensembl chr10:76,343,847...76,362,145 		JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,146,245...2,159,875
Ensembl chr20:2,146,257...2,159,631 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242 		JBrowse link
G Tsg101 tumor susceptibility 101 NOT|involved_in ISO (PMID:11595185) RGD PMID:11595185 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:17701905) RGD PMID:17701905 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448 		JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:15256501) RGD PMID:15256501 NCBI chr 3:11,970,401...12,009,463
Ensembl chr 3:11,972,813...12,007,570 		JBrowse link
G Mvb12a multivesicular body subunit 12A involved_in IBA
ISO		 PMID:21873635
(PMID:18005716)		 RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr16:19,973,611...19,978,479
Ensembl chr16:19,973,636...19,978,478 		JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in IBA
ISO		 PMID:21873635
(PMID:18005716)		 RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr 3:12,780,196...12,944,542
Ensembl chr 3:12,780,100...12,944,494 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of
involved_in		 ISO
IEA		 (PMID:15126635)
GO_REF:0000107		 RGD
Ensembl		 PMID:15126635 GO_REF:0000107 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) RGD PMID:18641129 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3850622|PMID:15256501)
(PMID:15126635), (PMID:18005716)		 UniProt
RGD		 PMID:15126635 PMID:15256501 PMID:18005716 GO_REF:0000024 MGI:3850622 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950 		JBrowse link
G Vta1 vesicle trafficking 1 involved_in ISO (PMID:15644320) RGD PMID:15644320 NCBI chr 1:8,830,405...8,878,191
Ensembl chr 1:8,830,411...8,878,244 		JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:62,923,620...62,926,150 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633 (PMID:23051622), (PMID:24107264), (PMID:24878737) RGD PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483), (PMID:23051622), (PMID:24878737) RGD PMID:16740483 PMID:23051622 PMID:24878737 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO UniProtKB:Q8WUM4|UniProtKB:Q9BY43 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:109,073,678...109,079,348
Ensembl chr10:109,073,678...109,079,348 		JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) RGD PMID:23045692 NCBI chr 9:44,472,364...44,483,723
Ensembl chr 9:44,472,365...44,560,837 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO UniProtKB:Q9H444 (PMID:24107264) RGD PMID:24107264 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO UniProtKB:O75351 (PMID:24107264) RGD PMID:24107264 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO UniProtKB:Q9UN37 (PMID:24107264) RGD PMID:24107264 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294), (PMID:33713620)		 Ensembl
RGD		 PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 PMID:33713620 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in ISO (PMID:33713620) RGD PMID:33713620 NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077 		JBrowse link
G Avp arginine vasopressin involved_in IEA
ISO		 GO_REF:0000107
(PMID:33713620)		 Ensembl
RGD		 PMID:33713620 GO_REF:0000107 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:33713620) RGD PMID:33713620 NCBI chr13:48,367,307...48,378,831
Ensembl chr13:48,367,307...48,378,831 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761 		JBrowse link
G Cd209 CD209 molecule involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:2,406,879...2,413,324
Ensembl chr12:2,406,879...2,413,324 		JBrowse link
G Cd300lf Cd300 molecule-like family member F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:103,669,781...103,690,584
Ensembl chr10:103,670,028...103,687,425 		JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:47,125,156...47,153,557
Ensembl chr13:47,126,741...47,154,292 		JBrowse link
G Cd81 Cd81 molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:216,237,663...216,253,460
Ensembl chr 1:216,237,697...216,253,311 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) RGD PMID:1719235 MGI:49235 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345 		JBrowse link
G Cldn1 claudin 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416 		JBrowse link
G Cldn6 claudin 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:12,999,256...13,002,860
Ensembl chr10:13,000,090...13,002,862 		JBrowse link
G Cldn9 claudin 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:13,003,010...13,004,441
Ensembl chr10:13,003,011...13,004,441 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:16051304), (PMID:24623090) RGD PMID:16051304 PMID:24623090 NCBI chr12:2,273,649...2,278,594
Ensembl chr12:2,273,941...2,277,169 		JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:2,817,633...2,826,303
Ensembl chr12:2,816,065...2,826,378 		JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:68,810,330...68,819,921
Ensembl chr 4:68,808,359...68,819,928 		JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO		 GO_REF:0000107
(MGI:5640952|PMID:15831716)		 Ensembl
RGD		 PMID:15831716 GO_REF:0000107 MGI:5640952 NCBI chr15:46,316,741...46,337,613
Ensembl chr15:46,316,741...46,337,612 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) RGD PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279 		JBrowse link
G Dag1 dystroglycan 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193 		JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:48,291,055...48,372,672
Ensembl chr 3:48,291,055...48,372,672 		JBrowse link
G Dppa1 developmental pluripotency associated 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,693,219...31,712,924
Ensembl chr10:31,693,219...31,712,924 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) RGD PMID:20202662 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21501828)		 UniProt
RGD		 PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757 		JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) RGD PMID:15650194 NCBI chr11:43,992,739...44,004,189
Ensembl chr11:44,001,579...44,003,664 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO
IEA		 (PMID:23029581)
GO_REF:0000107		 RGD
Ensembl		 PMID:23029581 GO_REF:0000107 NCBI chr 1:219,536,220...219,544,329
Ensembl chr 1:219,536,220...219,544,328 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,813,819...31,860,934
Ensembl chr10:31,813,814...31,848,379 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,332,834...116,337,522
Ensembl chr 8:116,332,796...116,335,435 		JBrowse link
G Hyal2 hyaluronidase 2 IDA facilitates RGD PMID:12584308 RGD:633153 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978 		JBrowse link
G Hyal3 hyaluronidase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:116,336,512...116,342,147
Ensembl chr 8:116,336,512...116,342,146 		JBrowse link
G Itgav integrin subunit alpha V involved_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) RGD PMID:21810281 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681 		JBrowse link
G LOC100359777 mCG12681-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,603,613...31,620,449
Ensembl chr10:31,603,613...31,620,443 		JBrowse link
G LOC689968 similar to kidney injury molecule 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,647,519...31,661,204
Ensembl chr10:31,647,898...31,661,344 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:12584355 RGD:1599797 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
G Nectin4 nectin cell adhesion molecule 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:89,755,665...89,774,185
Ensembl chr13:89,755,845...89,774,378 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)		 RGD PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:33000221), (PMID:33082294) RGD PMID:33000221 PMID:33082294 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217 		JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:80,820,306...80,835,712
Ensembl chr 1:80,820,050...80,835,701 		JBrowse link
G Serpinb3 serpin family B member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:27,186,701...27,193,211
Ensembl chr13:27,187,130...27,192,592 		JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) RGD PMID:12857889 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109 		JBrowse link
G Siva1 SIVA1, apoptosis-inducing factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:137,209,999...137,214,379
Ensembl chr 6:137,210,052...137,214,388 		JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:30341327)		 Ensembl
RGD		 PMID:30341327 GO_REF:0000107 NCBI chr 1:224,906,566...224,921,029
Ensembl chr 1:224,906,554...224,921,092 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:22573858) RGD PMID:22573858 NCBI chr 1:170,383,682...170,387,525
Ensembl chr 1:170,383,682...170,387,524 		JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,755,473...31,796,423
Ensembl chr10:31,755,510...31,790,263 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142 		JBrowse link
G Uvrag UV radiation resistance associated acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 1:163,844,804...164,101,568
Ensembl chr 1:163,844,818...164,101,578 		JBrowse link
G Vamp8 vesicle-associated membrane protein 8 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:100,250,301...100,252,756
Ensembl chr 4:100,250,301...100,252,755 		JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 3:122,947,887...122,969,543
Ensembl chr 3:122,947,913...122,969,541 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) RGD PMID:24550300 MGI:5552992 NCBI chr 3:111,097,352...111,108,206
Ensembl chr 3:111,097,326...111,108,295 		JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:72,918,552...73,056,785
Ensembl chr13:72,918,490...73,056,875 		JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20484494)		 UniProt
RGD		 PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563 		JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISO
IEA		 (PMID:33157038)
(MGI:6508519|PMID:33157038)
GO_REF:0000107		 RGD
Ensembl		 PMID:33157038 GO_REF:0000107 MGI:6508519 NCBI chr 4:140,837,745...140,881,866
Ensembl chr 4:140,837,745...140,881,865 		JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas6 growth arrest specific 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21501828)		 UniProt
RGD		 PMID:21501828 GO_REF:0000024 NCBI chr16:81,213,364...81,243,824
Ensembl chr16:81,213,364...81,243,757 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23029581)		 Ensembl
RGD		 PMID:23029581 GO_REF:0000107 NCBI chr 1:219,536,220...219,544,329
Ensembl chr 1:219,536,220...219,544,328 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (MGI:5898166|PMID:28189564) RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615 		JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:22379090) RGD PMID:22379090 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953 		JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) RGD PMID:19129479 NCBI chr19:41,968,692...41,990,843
Ensembl chr19:41,968,705...41,990,843 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069) RGD PMID:16193069 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:16193069) RGD PMID:16193069 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460 		JBrowse link
viral replication complex formation and maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:19376974)		 Ensembl
RGD		 PMID:19376974 GO_REF:0000107 NCBI chr11:87,858,323...87,975,549
Ensembl chr11:87,858,453...87,973,422 		JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx6 DEAD-box helicase 6 involved_in ISO (PMID:22022269) RGD PMID:22022269 NCBI chr 8:48,924,768...48,961,394
Ensembl chr 8:48,925,604...48,958,026 		JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA		 (PMID:23861867)
GO_REF:0000107		 RGD
Ensembl		 PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848 		JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300 		JBrowse link
G Eea1 early endosome antigen 1 involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 7:37,101,415...37,186,534
Ensembl chr 7:37,018,459...37,186,732 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 4:118,327,185...118,329,223
Ensembl chr 4:118,327,533...118,328,602 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 7:144,077,901...144,103,723
Ensembl chr 7:144,078,496...144,101,893 		JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:19376974)		 Ensembl
RGD		 PMID:19376974 GO_REF:0000107 NCBI chr11:87,858,323...87,975,549
Ensembl chr11:87,858,453...87,973,422 		JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 4:173,732,196...174,102,502
Ensembl chr 4:173,732,248...174,102,496 		JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:19376974) RGD PMID:19376974 NCBI chr 9:5,910...6,065 JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO
IEA		 (PMID:19376974)
GO_REF:0000107		 RGD
Ensembl		 PMID:19376974 GO_REF:0000107 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908 		JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO
IEA		 (PMID:25122793)
GO_REF:0000107		 RGD
Ensembl		 PMID:25122793 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057 		JBrowse link
G LOC100363782 RAB1B, member RAS oncogene family-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 1:220,480,834...220,491,469 JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO UniProtKB:Q9H0U4 (PMID:21680502) RGD PMID:21680502 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020 		JBrowse link
G Rab1b RAB1B, member RAS oncogene family involved_in
NOT|involved_in		 ISO
IEA		 UniProtKB:P62820 (PMID:21680502)
GO_REF:0000107		 RGD
Ensembl		 PMID:21680502 GO_REF:0000107 NCBI chr 1:220,483,529...220,491,469
Ensembl chr 1:220,480,834...220,491,469 		JBrowse link
G Rab1b-ps1 RAB1B, member RAS oncogene family, pseudogene 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:220,480,828...220,491,456
Ensembl chr 1:220,480,834...220,491,469 		JBrowse link
G Rab43 RAB43, member RAS oncogene family involved_in ISO (PMID:21680502) RGD PMID:21680502 NCBI chr 4:119,695,012...119,714,490
Ensembl chr 4:119,695,013...119,714,302 		JBrowse link
G Spcs1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) RGD PMID:24009510 PMID:29593046 NCBI chr16:7,080,389...7,081,957
Ensembl chr16:7,080,454...7,082,193 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:21680502) RGD PMID:21680502 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
G Usp6nl USP6 N-terminal like involved_in ISO (PMID:21680502) RGD PMID:21680502 NCBI chr17:75,759,428...75,887,108
Ensembl chr17:75,761,469...75,886,523 		JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:24098578) RGD PMID:24098578 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvb12a multivesicular body subunit 12A involved_in IBA
ISO		 PMID:21873635
(PMID:18005716)		 RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr16:19,973,611...19,978,479
Ensembl chr16:19,973,636...19,978,478 		JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in ISO
IBA		 (PMID:18005716)
PMID:21873635		 RGD PMID:18005716, PMID:21873635 RGD:13792537 NCBI chr 3:12,780,196...12,944,542
Ensembl chr 3:12,780,100...12,944,494 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    viral process 349
      viral life cycle 265
        intracellular transport of virus + 7
        negative regulation of viral life cycle + 35
        positive regulation of viral life cycle + 36
        regulation of viral life cycle + 157
        viral entry into host cell + 110
        viral genome integration into host DNA 0
        viral genome replication + 121
        viral release from host cell + 35
        virion assembly + 30
        virion attachment to host cell + 8
        virus maturation + 2
paths to the root