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ONTOLOGY REPORT - ANNOTATIONS

Term:viral life cycle
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Accession:GO:0019058 term browser browse the term
Definition:A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
Synonyms:narrow_synonym: viral assembly, maturation, egress, and release
 related_synonym: lytic viral life cycle;   viral infectious cycle;   viral replication
 alt_id: GO:0019067
 xref: Reactome:R-HSA-162588 "Budding and maturation of HIV virion";   Reactome:R-HSA-168255 "Influenza Infection";   Reactome:R-HSA-9609646 "HCMV Infection"


show annotations for term's descendants           Sort by:
viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA		 (PMID:8940009)
GO_REF:0000107		 RGD
Ensembl		 PMID:8940009 GO_REF:0000107 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO
IEA		 (PMID:8940009)
GO_REF:0000107		 RGD
Ensembl		 PMID:8940009 GO_REF:0000107 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600 		JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO
IBA		 (PMID:12857889)
GO_REF:0000033		 RGD
GO_Central		 PMID:12857889 GO_REF:0000033 NCBI chr 3:118,287,988...118,307,125
Ensembl chr 3:118,287,988...118,306,850 		JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360 		JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jpt2 Jupiter microtubule associated homolog 2 involved_in ISO (PMID:15094197) RGD PMID:15094197 NCBI chr10:13,963,135...13,983,212
Ensembl chr10:13,963,137...13,983,170 		JBrowse link
G Tpcn1 two pore segment channel 1 involved_in ISO
IEA		 (PMID:25722412)
GO_REF:0000107		 RGD
Ensembl		 PMID:25722412 GO_REF:0000107 NCBI chr12:35,972,813...36,029,632
Ensembl chr12:35,972,846...36,029,626 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO
IBA		 (PMID:25722412)
GO_REF:0000033		 RGD
GO_Central		 PMID:25722412 GO_REF:0000033 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236 		JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (PMID:28189564) RGD PMID:28189564 NCBI chr10:91,933,951...91,946,115
Ensembl chr10:91,933,951...91,946,150 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (PMID:28189564)
MGI:3856636 (PMID:28189564)		 RGD PMID:28189564 NCBI chr 5:141,988,111...142,021,483
Ensembl chr 5:141,991,568...142,021,120 		JBrowse link
entry receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:36228039), (PMID:36735681), (PMID:36757924)		 Ensembl
RGD		 PMID:36228039 PMID:36735681 PMID:36757924 GO_REF:0000107 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977 		JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) RGD PMID:25540360 NCBI chr 4:33,852,597...34,166,159
Ensembl chr 4:33,852,927...34,166,149 		JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27777077) RGD PMID:27777077 NCBI chr 6:122,590,461...122,596,996
Ensembl chr 6:122,590,472...122,779,294 		JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx56 DEAD-box helicase 56 acts_upstream_of_negative_effect ISO (PMID:33109765) RGD PMID:33109765 NCBI chr14:81,112,008...81,122,331
Ensembl chr14:81,112,012...81,122,333 		JBrowse link
G Fbxl2 F-box and leucine-rich repeat protein 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:113,916,660...113,965,137
Ensembl chr 8:113,913,373...113,965,066 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:24514761) RGD PMID:24514761 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:29324904) RGD PMID:29324904 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:25106914) RGD PMID:25106914 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
G Tmem41b transmembrane protein 41B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:164,012,585...164,026,967
Ensembl chr 1:164,012,592...164,026,933 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763 		JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (PMID:18827027) RGD PMID:18827027 NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922 		JBrowse link
G Ccl12 C-C motif chemokine ligand 12 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:67,070,230...67,071,780
Ensembl chr10:67,070,230...67,071,780 		JBrowse link
G Ccnk cyclin K involved_in ISO (PMID:21555514) RGD PMID:21555514 NCBI chr 6:127,090,115...127,113,195
Ensembl chr 6:127,090,569...127,113,191 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:24380861) RGD PMID:24380861 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16601681)		 UniProt
RGD		 PMID:16601681 GO_REF:0000024 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA		 (PMID:25244949)
GO_REF:0000107		 RGD
Ensembl		 PMID:25244949 GO_REF:0000107 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO (PMID:28095508) RGD PMID:28095508 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in ISO (PMID:28095508) RGD PMID:28095508 NCBI chr 6:33,978,730...34,033,201
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:23355615) RGD PMID:23355615 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
negative regulation of fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ch25h cholesterol 25-hydroxylase involved_in ISO
ISS		 (PMID:32944968), (PMID:33239446)
GO_REF:0000024		 RGD
UniProt		 PMID:32944968 PMID:33239446 GO_REF:0000024 NCBI chr 1:232,014,877...232,016,195
Ensembl chr 1:232,014,880...232,016,195 		JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO
ISS		 (PMID:19036818), (PMID:20686043), (PMID:20943977)
(PMID:20686043), (PMID:21919738), (PMID:22284121)
GO_REF:0000024		 RGD
UniProt		 PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 NCBI chr16:18,216,605...18,220,979
Ensembl chr16:18,217,407...18,220,979 		JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:36,905,698...36,936,308
Ensembl chr11:36,906,111...36,930,342 		JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:1,700,905...1,710,249
Ensembl chr20:1,700,905...1,710,249 		JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972 		JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:18779051), (PMID:21835787), (PMID:29290613)		 GO_Central
RGD		 PMID:18779051 PMID:21835787 PMID:29290613 GO_REF:0000033 NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:17005673)
GO_REF:0000024		 RGD
UniProt		 PMID:17005673 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) RGD PMID:18774950 NCBI chr10:60,474,262...60,495,813
Ensembl chr10:60,475,897...60,496,773 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (PMID:20164836) RGD PMID:20164836 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506 		JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within
involved_in		 ISO MGI:2143362 (PMID:19270682)
(PMID:20164836)		 RGD PMID:19270682 PMID:20164836 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in ISO (PMID:16378963) RGD PMID:16378963 NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922 		JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 involved_in ISO (PMID:18005698) RGD PMID:18005698 NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188 		JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21919738), (PMID:22284121)
(PMID:20943977)		 UniProt
RGD		 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 NCBI chr16:18,216,605...18,220,979
Ensembl chr16:18,217,407...18,220,979 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in ISO
IEA
ISS		 (PMID:19189853), (PMID:19840259)
(PMID:20038207)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19189853 PMID:19840259 PMID:20038207 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971 		JBrowse link
G ENSRNOG00000068074 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 4:59,549,152...59,549,829 JBrowse link
G ENSRNOG00000070481 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 4:30,960,845...30,961,834 JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) RGD PMID:23093934 NCBI chr 1:209,640,865...209,656,551
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in ISO (PMID:33727702) RGD PMID:33727702 NCBI chr 3:47,228,980...47,275,403
Ensembl chr 3:47,227,364...47,275,456 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in ISO
IBA		 (PMID:21253575), (PMID:21976647)
GO_REF:0000033		 RGD
GO_Central		 PMID:21253575 PMID:21976647 GO_REF:0000033 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA		 (PMID:21253575)
GO_REF:0000033		 RGD
GO_Central		 PMID:21253575 GO_REF:0000033 NCBI chr 1:196,051,539...196,052,719
Ensembl chr 1:196,051,537...196,052,741 		JBrowse link
G Ifitm2-ps2 interferon induced transmembrane protein 2, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:68,187,131...68,187,808
Ensembl chr13:68,187,366...68,187,854 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISO
IBA		 (PMID:20943977), (PMID:21253575)
GO_REF:0000033		 RGD
GO_Central		 PMID:20943977 PMID:21253575 GO_REF:0000033 NCBI chr 1:196,111,026...196,112,135
Ensembl chr 1:196,111,043...196,112,203 		JBrowse link
G Ifitm3-ps1 interferon induced transmembrane protein3, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:61,233,269...61,233,688
Ensembl chr14:61,233,269...61,233,688 		JBrowse link
G Ifitm3-ps2 interferon induced transmembrane protein3, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:33,137,146...33,137,562
Ensembl chr11:33,137,146...33,138,061 		JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,117,043...196,118,315
Ensembl chr 1:196,117,049...196,118,386 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:19008854) RGD PMID:19008854 NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523 		JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:21123651)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21123651 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,922,409...19,960,495
Ensembl chr 8:19,922,460...19,960,350 		JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in ISO (PMID:19357168), (PMID:33727702) RGD PMID:19357168 PMID:33727702 NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435 		JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in ISO
IBA		 (PMID:21036379)
GO_REF:0000033		 RGD
GO_Central		 PMID:21036379 GO_REF:0000033 NCBI chr 1:132,829,303...132,837,027
Ensembl chr 1:132,815,123...132,837,027 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) RGD PMID:25193851 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:20451243) RGD PMID:20451243 NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094 		JBrowse link
G Mx1 MX dynamin like GTPase 1 involved_in ISO (PMID:14687945), (PMID:15047845), (PMID:16202617) RGD PMID:14687945 PMID:15047845 PMID:16202617 NCBI chr11:36,799,659...36,825,209
Ensembl chr11:36,799,660...36,823,507 		JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:24500530)
(PMID:11266216)		 RGD PMID:11266216 PMID:24500530 NCBI chr11:36,905,698...36,936,308
Ensembl chr11:36,906,111...36,930,342 		JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in ISO (PMID:31133753) RGD PMID:31133753 NCBI chr19:20,222,811...20,273,570
Ensembl chr19:20,222,776...20,273,570 		JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in ISO
IBA		 (PMID:18931074)
GO_REF:0000033
(PMID:23196181)		 RGD
GO_Central		 PMID:18931074 PMID:23196181 GO_REF:0000033 NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517 		JBrowse link
G Oas1b 2-5 oligoadenylate synthetase 1B involved_in ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr12:35,724,561...35,735,271
Ensembl chr12:35,724,055...35,735,242 		JBrowse link
G Oas1d 2'-5' oligoadenylate synthetase 1D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,648,583...35,658,037
Ensembl chr12:35,648,583...35,657,902 		JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,750,359...35,759,304
Ensembl chr12:35,750,359...35,759,301 		JBrowse link
G Oas1h 2 ' -5 ' oligoadenylate synthetase 1H involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,682,862...35,695,717
Ensembl chr12:35,683,699...35,693,366 		JBrowse link
G Oas1i 2 ' -5 ' oligoadenylate synthetase 1I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,624,566...35,636,608
Ensembl chr12:35,624,592...35,636,604 		JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,802,824...35,830,778
Ensembl chr12:35,806,759...35,829,371 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:19056102), (PMID:23196181)		 Ensembl
GO_Central
RGD		 PMID:19056102 PMID:23196181 GO_REF:0000033 GO_REF:0000107 NCBI chr12:35,779,028...35,802,781
Ensembl chr12:35,779,022...35,802,781 		JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like involved_in ISO
IBA		 (PMID:18931074), (PMID:20074559)
GO_REF:0000033		 RGD
GO_Central		 PMID:18931074 PMID:20074559 GO_REF:0000033 NCBI chr12:41,682,900...41,695,641
Ensembl chr12:41,682,900...41,695,641 		JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,710,072...41,722,687
Ensembl chr12:41,709,435...41,722,547 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO
ISS		 (PMID:15308695)
GO_REF:0000024		 RGD
UniProt		 PMID:15308695 GO_REF:0000024 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Rnasel ribonuclease L involved_in ISO
IBA		 (PMID:23196181)
GO_REF:0000033		 RGD
GO_Central		 PMID:23196181 GO_REF:0000033 NCBI chr13:65,894,990...65,910,354
Ensembl chr13:65,901,459...65,908,704 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21880757)
(PMID:21957124)		 Ensembl
RGD		 PMID:21880757 PMID:21957124 GO_REF:0000107 NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO
IEA
ISS		 (PMID:26735137)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26735137 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,408,298...19,414,084
Ensembl chr 8:19,408,333...19,413,971 		JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (PMID:19333378) RGD PMID:19333378 NCBI chr 3:153,082,208...153,084,457
Ensembl chr 3:153,082,369...153,084,453 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr20:6,645,809...6,682,448
Ensembl chr20:6,645,809...6,682,134 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:12417631) RGD PMID:12417631 NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10490959) RGD PMID:10490959 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218) RGD PMID:24882218 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO
IEA
IDA		 (PMID:21102435)
GO_REF:0000107
PMID:21876179
(PMID:21876179)		 RGD
Ensembl		 PMID:21102435 PMID:21876179 PMID:21876179 GO_REF:0000107, RGD:8554819 NCBI chr 4:67,012,129...67,062,428
Ensembl chr 4:67,012,185...67,062,428 		JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 involved_in ISO (PMID:31685995) RGD PMID:31685995 NCBI chr 3:155,764,073...155,791,777
Ensembl chr 3:155,764,980...155,821,242 		JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2n arkadia (RNF111) N-terminal like PKA signaling regulator 2N involved_in ISO (PMID:31341047) RGD PMID:31341047 NCBI chr18:71,155,956...71,243,655
Ensembl chr18:71,157,700...71,243,482 		JBrowse link
G Csnk2b casein kinase 2 beta involved_in IEA
ISO		 GO_REF:0000107
(PMID:31341047)		 Ensembl
RGD		 PMID:31341047 GO_REF:0000107 NCBI chr20:3,700,363...3,705,331
Ensembl chr20:3,698,733...3,707,133 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19207730), (PMID:22347431) RGD PMID:19207730 PMID:22347431 NCBI chr14:81,279,292...81,282,960
Ensembl chr14:81,275,091...81,299,601 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:25106914) RGD PMID:25106914 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529 		JBrowse link
G Atg16l2 autophagy related 16-like 2 acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420 		JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24550300)		 Ensembl
RGD		 PMID:24550300 GO_REF:0000107 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IEA
ISO		 GO_REF:0000107
(PMID:26581985)		 Ensembl
RGD		 PMID:26581985 GO_REF:0000107 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:66,603,877...66,609,734
Ensembl chr 8:66,603,861...66,630,428 		JBrowse link
G Stom stomatin involved_in ISO (PMID:25262680) RGD PMID:25262680 NCBI chr 3:18,645,058...18,667,343
Ensembl chr 3:18,644,378...18,667,354 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763 		JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 involved_in ISO (PMID:21559518) RGD PMID:21559518 NCBI chr18:37,266,559...37,331,681
Ensembl chr18:37,265,836...37,331,023 		JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in ISO (PMID:35551511) RGD PMID:35551511 NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039 		JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:24514761) RGD PMID:24514761 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Top2a DNA topoisomerase II alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:16712776)		 Ensembl
RGD		 PMID:16712776 GO_REF:0000107 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:16712776) RGD PMID:16712776 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 involved_in ISO
IEA		 (PMID:11595185)
GO_REF:0000107		 RGD
Ensembl		 PMID:11595185 GO_REF:0000107 NCBI chr 1:97,412,689...97,442,589
Ensembl chr 1:97,410,848...97,442,554 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:32,560,047...32,589,015
Ensembl chr12:32,560,047...32,589,014 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA		 (PMID:24878737)
GO_REF:0000107		 RGD
Ensembl		 PMID:24878737 GO_REF:0000107 NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887 		JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin involved_in ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387 		JBrowse link
G Cd4 Cd4 molecule involved_in ISO
IEA		 (PMID:24942581)
GO_REF:0000107		 RGD
Ensembl		 PMID:24942581 GO_REF:0000107 NCBI chr 4:157,668,878...157,695,366
Ensembl chr 4:157,668,878...157,695,191 		JBrowse link
G Cd74 CD74 molecule involved_in ISO
IEA		 (PMID:24942581)
GO_REF:0000107		 RGD
Ensembl		 PMID:24942581 GO_REF:0000107 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314 		JBrowse link
G Lgals1 galectin 1 involved_in ISO
IEA		 (PMID:21670307)
GO_REF:0000107		 RGD
Ensembl		 PMID:21670307 GO_REF:0000107 NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:36,934,306...36,973,779
Ensembl chr11:36,934,306...36,973,715 		JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:45,475,819...45,508,409
Ensembl chr 8:45,476,053...45,508,409 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:43,758,299...43,771,138
Ensembl chr10:43,758,354...43,771,138 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440 		JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:41,351,857...41,365,021 JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18362360)
GO_REF:0000107
(PMID:18362360), (PMID:19651874)		 UniProt
RGD
Ensembl		 PMID:18362360 PMID:19651874 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282 		JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:21289159)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21289159 GO_REF:0000024 GO_REF:0000107 NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:23386060) RGD PMID:23386060 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA		 (PMID:23137809)
GO_REF:0000107		 RGD
Ensembl		 PMID:23137809 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:20862261) RGD PMID:20862261 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168 		JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISO
IEA		 (PMID:26567527)
GO_REF:0000107		 RGD
Ensembl		 PMID:26567527 GO_REF:0000107 NCBI chr12:21,318,251...21,390,350
Ensembl chr12:21,319,568...21,390,350 		JBrowse link
G Gbp7 guanylate binding protein 7 involved_in ISO (PMID:33408175) RGD PMID:33408175 NCBI chr 2:231,275,521...231,297,289
Ensembl chr 2:231,275,640...231,297,278 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:65,501,240...65,538,507
Ensembl chr 8:65,501,240...65,538,507 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:21191019) RGD PMID:21191019 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15231837)		 Ensembl
RGD		 PMID:15231837 GO_REF:0000107 NCBI chr16:1,920,062...1,925,638
Ensembl chr16:1,915,386...1,925,887 		JBrowse link
G Pkn2 protein kinase N2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15364941)		 Ensembl
RGD		 PMID:15364941 GO_REF:0000107 NCBI chr 2:231,793,584...231,898,953
Ensembl chr 2:231,793,584...231,898,953 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr14:81,279,292...81,282,960
Ensembl chr14:81,275,091...81,299,601 		JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 2:164,727,803...164,740,168
Ensembl chr 2:164,727,779...164,740,221 		JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:135,406,172...135,419,332
Ensembl chr 5:135,406,176...135,419,235 		JBrowse link
G Ppih peptidylprolyl isomerase H involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:132,906,324...132,924,341
Ensembl chr 5:132,906,328...132,924,267 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:20614012) RGD PMID:20614012 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr20:6,645,809...6,682,448
Ensembl chr20:6,645,809...6,682,134 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:20498328) RGD PMID:20498328 NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:155,680,000...155,725,969
Ensembl chr 3:155,680,000...155,725,909 		JBrowse link
G Tarbp2 Tarbp2 subunit of RISC loading complex involved_in ISO
ISS		 (PMID:11641396)
GO_REF:0000024		 RGD
UniProt		 PMID:11641396 GO_REF:0000024 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO (PMID:31849860) RGD PMID:31849860 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964 		JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (PMID:22539786) RGD PMID:22539786 NCBI chr17:41,351,857...41,365,021 JBrowse link
G Vapb VAMP associated protein B and C involved_in ISS
ISO		 GO_REF:0000024
(PMID:16227268)		 UniProt
RGD		 PMID:16227268 GO_REF:0000024 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763 		JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Cd209d CD209d molecule involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:1,891,109...1,897,559
Ensembl chr12:1,891,113...1,901,171 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (PMID:28189564) RGD PMID:28189564 NCBI chr10:91,933,951...91,946,115
Ensembl chr10:91,933,951...91,946,150 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (PMID:28189564)
MGI:3856636 (PMID:28189564)		 RGD PMID:28189564 NCBI chr 5:141,988,111...142,021,483
Ensembl chr 5:141,991,568...142,021,120 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO
IEA		 (PMID:22673088)
GO_REF:0000107		 RGD
Ensembl		 PMID:22673088 GO_REF:0000107 NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142 		JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO
IEA		 UniProtKB:P51636 (PMID:21047970)
GO_REF:0000107		 RGD
Ensembl		 PMID:21047970 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Cav2 caveolin 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:O60840 (PMID:21047970)		 Ensembl
RGD		 PMID:21047970 GO_REF:0000107 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32855215) RGD PMID:16081529 PMID:32855215 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G KIAA0319l KIAA0319 like acts_upstream_of_or_within ISO MGI:5907241|MGI:5907242 (PMID:26814968) RGD PMID:26814968 NCBI chr 5:139,047,847...139,140,709
Ensembl chr 5:139,046,143...139,140,715 		JBrowse link
G Rnasek ribonuclease K involved_in ISO (PMID:26212330) RGD PMID:26212330 NCBI chr10:54,954,904...54,956,622
Ensembl chr10:54,951,991...54,956,601 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236 		JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO (PMID:18343844) RGD PMID:18343844 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977 		JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in ISO (PMID:15479853), (PMID:32766577) RGD PMID:15479853 PMID:32766577 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in IEA
ISO		 GO_REF:0000107
(PMID:36228039), (PMID:36735681), (PMID:36757924)		 Ensembl
RGD		 PMID:36228039 PMID:36735681 PMID:36757924 GO_REF:0000107 NCBI chr11:70,469,817...70,484,268
Ensembl chr11:70,469,804...70,484,267 		JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,106,876...40,417,661
Ensembl chr20:40,106,876...40,417,653 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:11602758) RGD PMID:11602758 NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257 		JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,766,401...158,787,915
Ensembl chr 1:158,765,969...158,787,183 		JBrowse link
G Trim30d tripartite motif-containing 30D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,795,288...158,813,913
Ensembl chr 1:158,720,410...158,814,012 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915 		JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in IEA
ISO		 GO_REF:0000107
(PMID:16950491)		 Ensembl
RGD		 PMID:16950491 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Ddx5 DEAD-box helicase 5 IMP RGD PMID:19224332 RGD:5128521 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3719397 (PMID:17613256) RGD PMID:17613256 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:17613256) RGD PMID:17613256 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790 		JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO (PMID:17613256) RGD PMID:17613256 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO
ISS		 (PMID:11250896)
GO_REF:0000024		 RGD
UniProt		 PMID:11250896 GO_REF:0000024 NCBI chr14:81,279,292...81,282,960
Ensembl chr14:81,275,091...81,299,601 		JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:21,006,522...21,007,284
Ensembl chr14:21,006,538...21,007,310 		JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 acts_upstream_of_or_within ISO MGI:3809768 (PMID:293683) RGD PMID:293683 NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:21810281) RGD PMID:21810281 NCBI chr11:81,153,491...81,224,643
Ensembl chr11:81,193,649...81,221,784 		JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 acts_upstream_of_or_within ISO (PMID:14963118) RGD PMID:14963118 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
symbiont entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 GO_REF:0000107
(PMID:33163980)
(PMID:16051304), (PMID:33163980)		 Ensembl
RGD		 PMID:16051304 PMID:33163980 GO_REF:0000107 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977 		JBrowse link
G Avp arginine vasopressin involved_in ISO (PMID:33713620) RGD PMID:33713620 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:43,046,531...43,059,046
Ensembl chr13:43,046,267...43,057,792 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Cd209d CD209d molecule involved_in ISO (PMID:24623090) RGD PMID:24623090 NCBI chr12:1,891,109...1,897,559
Ensembl chr12:1,891,113...1,901,171 		JBrowse link
G Cd300ld Cd300 molecule-like family member D involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,082,957...100,115,853
Ensembl chr10:100,083,490...100,115,821 		JBrowse link
G Cd300lf Cd300 molecule-like family member F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,359,942...100,376,130
Ensembl chr10:100,359,943...100,376,041 		JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831 		JBrowse link
G Cd81 Cd81 molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660 		JBrowse link
G Cldn1 claudin 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724 		JBrowse link
G Cldn6 claudin 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:12,710,302...12,713,987
Ensembl chr10:12,709,960...12,715,973 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO (PMID:16051304), (PMID:24623090) RGD PMID:16051304 PMID:24623090 NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Clec4m C-type lectin domain family 4 member M involved_in ISO (PMID:15479853), (PMID:24623090), (PMID:32766577) RGD PMID:15479853 PMID:24623090 PMID:32766577 NCBI chr12:1,915,902...1,924,529
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:69,407,125...69,416,872
Ensembl chr 4:69,407,835...69,416,859 		JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:3036369) RGD PMID:3036369 NCBI chr13:106,678,579...106,716,595
Ensembl chr13:106,685,413...106,716,235 		JBrowse link
G Ctsb cathepsin B involved_in IEA
ISO		 GO_REF:0000107
(PMID:15831716)		 Ensembl
RGD		 PMID:15831716 GO_REF:0000107 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343) RGD PMID:16339146 PMID:18562523 PMID:26953343 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Dag1 dystroglycan 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:46,962,233...47,043,870
Ensembl chr 3:46,962,243...47,043,901 		JBrowse link
G Dppa1 developmental pluripotency associated 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,998,049...31,017,756
Ensembl chr10:30,998,049...31,017,756
Ensembl chr12:30,998,049...31,017,756 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) RGD PMID:20202662 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21501828)		 UniProt
RGD		 PMID:21501828 GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) RGD PMID:15650194 NCBI chr11:41,898,300...41,899,646
Ensembl chr11:41,898,356...41,900,441 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO
IEA		 (PMID:23029581)
GO_REF:0000107		 RGD
Ensembl		 PMID:23029581 GO_REF:0000107 NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,118,667...31,151,730
Ensembl chr10:31,119,088...31,151,698 		JBrowse link
G Havcr1l1 hepatitis A virus cellular receptor 1 like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,919,860...30,941,388
Ensembl chr10:30,923,809...30,941,108 		JBrowse link
G Havcr1l2 hepatitis A virus cellular receptor 1 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:30,963,058...30,983,169
Ensembl chr10:30,968,739...30,981,979 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
IEA		 facilitates
GO_REF:0000108		 GOC
RGD		 PMID:12584308 GO_REF:0000108, RGD:633153 NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850 		JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:19,922,409...19,960,495
Ensembl chr 8:19,922,460...19,960,350 		JBrowse link
G Insr insulin receptor involved_in ISO (PMID:17001305) RGD PMID:17001305 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Itgav integrin subunit alpha V involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:68,838,514...68,926,653
Ensembl chr 3:68,838,189...68,926,639 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
G Myh10 myosin heavy chain 10 involved_in ISO
IEA		 (PMID:25428876)
GO_REF:0000107		 RGD
Ensembl		 PMID:25428876 GO_REF:0000107 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
G Myh9 myosin, heavy chain 9 involved_in ISO (PMID:20944748) RGD PMID:20944748 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in IMP
ISO		 (PMID:22146396), (PMID:25231300), (PMID:28542478) RGD PMID:22146396 PMID:25231300 PMID:28542478 PMID:12584355 RGD:1599797 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:54,362,712...54,469,351
Ensembl chr11:54,364,487...54,462,519 		JBrowse link
G Nectin4 nectin cell adhesion molecule 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:83,802,589...83,821,711
Ensembl chr13:83,803,184...83,821,709 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103) RGD PMID:21866101 PMID:21866103 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049 		JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:29324904) RGD PMID:29324904 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:79,561,294...79,576,700
Ensembl chr 1:79,546,879...79,576,715 		JBrowse link
G Serpinb3 serpin family B member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:23,274,120...23,280,660
Ensembl chr13:23,274,484...23,313,682 		JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) RGD PMID:12857889 NCBI chr 3:118,287,988...118,307,125
Ensembl chr 3:118,287,988...118,306,850 		JBrowse link
G Siva1 SIVA1, apoptosis-inducing factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:131,705,323...131,709,697
Ensembl chr 6:131,705,323...131,709,690 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:84,270,316...84,305,497
Ensembl chr13:84,270,316...84,305,497 		JBrowse link
G Slc20a2 solute carrier family 20 member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:69,460,850...69,551,418
Ensembl chr16:69,460,462...69,521,711 		JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:30341327)		 Ensembl
RGD		 PMID:30341327 GO_REF:0000107 NCBI chr 1:205,604,468...205,618,931
Ensembl chr 1:205,604,468...205,618,931 		JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:6,628,288...6,703,849
Ensembl chr12:6,628,007...6,703,849 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of
acts_upstream_of_positive_effect		 ISO (PMID:22573858)
(PMID:33163980)		 RGD PMID:22573858 PMID:33163980 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:31,060,308...31,101,262
Ensembl chr10:31,060,326...31,094,623 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142 		JBrowse link
G Uvrag UV radiation resistance associated acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Vamp8 vesicle-associated membrane protein 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24550300)
GO_REF:0000107		 RGD
Ensembl		 PMID:24550300 GO_REF:0000107 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897 		JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (PMID:24550300) RGD PMID:24550300 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964 		JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:67,441,205...67,585,950
Ensembl chr13:67,446,380...67,585,946 		JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:115,292,431...115,305,798
Ensembl chr 2:115,292,516...115,303,628 		JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:15256501) RGD PMID:15256501 NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154 		JBrowse link
G Mvb12a multivesicular body subunit 12A involved_in IEA
IBA		 GO_REF:0000107
GO_REF:0000033		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:18,252,227...18,257,111
Ensembl chr16:18,252,222...18,257,539 		JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:17,034,002...17,192,658
Ensembl chr 3:17,034,003...17,193,202 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) RGD PMID:18641129 NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15256501)
GO_REF:0000107
(PMID:15126635)		 UniProt
RGD
Ensembl		 PMID:15126635 PMID:15256501 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:97,412,689...97,442,589
Ensembl chr 1:97,410,848...97,442,554 		JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436 		JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA
ISO		 GO_REF:0000107
(PMID:24878737)		 Ensembl
RGD		 PMID:24878737 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640 		JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA
ISO		 GO_REF:0000107
(PMID:17940959)
(PMID:16193069)		 Ensembl
RGD		 PMID:16193069 PMID:17940959 GO_REF:0000107 NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:16193069)
(PMID:17940959)		 RGD PMID:16193069 PMID:17940959 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229 		JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436 		JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO UniProtKB:Q9UQN3 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO UniProtKB:O43633 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO UniProtKB:Q8WUM4|UniProtKB:Q9BY43 (PMID:24107264), (PMID:24878737) RGD PMID:24107264 PMID:24878737 NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO
IEA		 (PMID:24878737)
GO_REF:0000107		 RGD
Ensembl		 PMID:24878737 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640 		JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:24878737) RGD PMID:24878737 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216 		JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) RGD PMID:23045692 NCBI chr 9:40,113,943...40,125,280
Ensembl chr 9:40,113,946...40,125,289 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO UniProtKB:Q9H444 (PMID:24107264) RGD PMID:24107264 NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA		 UniProtKB:O75351 (PMID:24107264)
GO_REF:0000107		 RGD
Ensembl		 PMID:24107264 GO_REF:0000107 NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO UniProtKB:Q9UN37 (PMID:24107264) RGD PMID:24107264 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229 		JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ARF like GTPase 8B involved_in ISO (PMID:33157038) RGD PMID:33157038 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596 		JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas6 growth arrest specific 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21501828)		 UniProt
RGD		 PMID:21501828 GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23029581)		 Ensembl
RGD		 PMID:23029581 GO_REF:0000107 NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO MGI:3856636 (PMID:28189564) RGD PMID:28189564 NCBI chr 5:141,988,111...142,021,483
Ensembl chr 5:141,991,568...142,021,120 		JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:22379090) RGD PMID:22379090 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO
IEA		 (PMID:25556234)
GO_REF:0000107		 RGD
Ensembl		 PMID:25556234 GO_REF:0000107 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA		 (PMID:23137809)
GO_REF:0000107		 RGD
Ensembl		 PMID:23137809 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA		 (PMID:23861867)
GO_REF:0000107		 RGD
Ensembl		 PMID:23861867 GO_REF:0000107 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889 		JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257 		JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:1,653,165...1,666,494
Ensembl chr20:1,653,165...1,666,494 		JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:97,412,689...97,442,589
Ensembl chr 1:97,410,848...97,442,554 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847 		JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:32,560,047...32,589,015
Ensembl chr12:32,560,047...32,589,014 		JBrowse link
G Zfp502 zinc finger protein 502 involved_in ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:28,884,390...28,908,726 JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx6 DEAD-box helicase 6 involved_in ISO (PMID:22022269) RGD PMID:22022269 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
Ensembl chr 8:44,931,974...44,964,405 		JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA		 (PMID:23861867)
GO_REF:0000107		 RGD
Ensembl		 PMID:23861867 GO_REF:0000107 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380 		JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcbp1 poly(rC) binding protein 1 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 4:118,972,698...118,974,705
Ensembl chr 4:118,972,661...118,976,500 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) RGD PMID:12414943 NCBI chr 7:133,605,375...133,631,312
Ensembl chr 7:133,605,573...133,629,863 		JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO
IEA		 (PMID:25122793)
GO_REF:0000107		 RGD
Ensembl		 PMID:25122793 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G ENSRNOG00000063848 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 9:74,231,751...74,237,923 JBrowse link
G ENSRNOG00000064469 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr16:44,597,493...44,599,395 JBrowse link
G ENSRNOG00000068182 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr14:74,037,179...74,039,851 JBrowse link
G ENSRNOG00000068626 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:65,366,642...65,382,934 JBrowse link
G Foxo1l forkhead box O1 like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:36,636,617...36,646,847
Ensembl chr 9:36,640,751...36,646,855 		JBrowse link
G LOC134485139 uncharacterized LOC134485139 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:129,637,115...129,655,358 JBrowse link
G Rab43 RAB43, member RAS oncogene family involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:120,249,650...120,269,174
Ensembl chr 4:120,249,879...120,269,174 		JBrowse link
G Spcs1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) RGD PMID:24009510 PMID:29593046 NCBI chr16:6,190,208...6,191,776
Ensembl chr16:6,190,262...6,192,000 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
G Usp6nl USP6 N-terminal like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:71,828,433...71,956,878
Ensembl chr17:71,830,469...71,956,027 		JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO
IEA		 (PMID:24098578)
GO_REF:0000107		 RGD
Ensembl		 PMID:24098578 GO_REF:0000107 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488 		JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvb12a multivesicular body subunit 12A involved_in IEA
IBA		 GO_REF:0000107
GO_REF:0000033		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:18,252,227...18,257,111
Ensembl chr16:18,252,222...18,257,539 		JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:17,034,002...17,192,658
Ensembl chr 3:17,034,003...17,193,202 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20537
    viral process 322
      viral life cycle 244
        intracellular transport of virus + 7
        negative regulation of viral life cycle + 8
        positive regulation of viral life cycle + 26
        regulation of viral life cycle + 123
        symbiont entry into host cell + 85
        viral genome integration into host DNA 0
        viral genome replication + 118
        viral release from host cell + 25
        virion assembly + 33
        virion attachment to host cell + 6
        virus maturation + 2
paths to the root