Leukc2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Leukc2 (Leukocyte quantity QTL 2) Rattus norvegicus

Symbol: Leukc2
Name: Leukocyte quantity QTL 2
RGD ID: 5135226
Previously known as: eosinophilia 2; eos2
Trait: eosinophil quantity   (VT:0002602)    
Measurement Type: blood eosinophil count   (CMO:0000033)    
LOD Score: LRS: 7.1
P Value: Not Available
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82120,039,407 - 151,869,825RGD_MAPPER_PIPELINE
mRatBN7.22118,111,229 - 149,559,726RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02121,750,419 - 155,965,721RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02141,390,480 - 175,354,471RGDRnor5.0
RGSC_v3.42121,545,310 - 155,102,371RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: ACI/NSlc MES/Slc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Eosinophilia  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ACI/NSlc  (IEA)
MES/Slc  (IEA)

References

References - curated
# Reference Title Reference Citation
1. A locus for eosinophilia in the MES rat is on Chromosome 19. Li G, etal., Mamm Genome. 2005 Jul;16(7):516-23.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41366851Rbmxl1-ps1Rbmx like 1, pseudogene 12120145632120153792Rat
6504224Pramel7-ps1preferentially expressed antigen in melanoma-like 7, pseudogene 12120164731120165247Rat
2323451Rnps1-ps2RNA binding protein with serine rich domain 1, pseudogene 22120301543120302391Rat
41327895Gabarapl2-ps3GABA type A receptor associated protein like 2, pseudogene 32120427500120429492Rat
41355076Rnu6-1158RNA, U6 small nuclear 11582120498874120498978Rat
1561719Atp11bATPase phospholipid transporting 11B (putative)2120513535120619249Rat
402435683LOC134485899uncharacterized LOC1344858992120579464120591674Rat
1309668Dcun1d1defective in cullin neddylation 1 domain containing 12120649445120700879Rat
1310615Mccc1methylcrotonyl-CoA carboxylase subunit 12120727313120779334Rat
1585492Ccdc144bcoiled-coil domain containing 144B2120790909120852758Rat
402407593LOC134485900small ribosomal subunit protein uS13-like2120820693120821184Rat
402190914LOC134485901uncharacterized LOC1344859012120860582120871326Rat
727973Acad9acyl-CoA dehydrogenase family, member 92120871329120894306Rat
2323100Zfp267zinc finger protein 2672120945434120964039Rat
41098583Surf6-ps3surfeit 6, pseudogene 32120952586120955435Rat
1304917Arslarylsulfatase L2120966992120975015Rat
728380Qrfprpyroglutamylated RFamide peptide receptor2120981235121025020Rat
41370461Pou5f1-ps3POU class 5 homeobox 1, pseudogene 32121015270121016290Rat
2120Anxa5annexin A52121242133121272935Rat
11384727Smim43small integral membrane protein 432121304262121314779Rat
1307888Exosc9exosome component 92121344154121355110Rat
621059Ccna2cyclin A22121355363121361762Rat
1309264Bbs7Bardet-Biedl syndrome 72121362884121402473Rat
61973Trpc3transient receptor potential cation channel, subfamily C, member 32121409436121487095Rat
1593209Rpl7-ps22ribosomal protein L7, pseudogene 222121507448121508273Rat
1307100Bltp1bridge-like lipid transfer protein family member 12121636181121852802Rat
40993430Thumpd1-ps1THUMP domain containing 1, pseudogene 12121769976121771085Rat
1359309Adad1adenosine deaminase domain containing 12121872387121935721Rat
620047Il2interleukin 22121932968121937672Rat
1307384Il21interleukin 212122045240122055142Rat
1586489Cetn4centrin 42122128081122131440Rat
1561608Bbs12Bardet-Biedl syndrome 122122131550122149152Rat
2609Fgf2fibroblast growth factor 22122164454122218796Rat
621356Nudt6nudix hydrolase 62122218031122234488Rat
1310478Afg2aAFG2 AAA ATPase homolog A2122234619122425808Rat
41320820LOC120101257small nucleolar RNA SNORA512122388809122388941Rat
11433166LOC10835024260S ribosomal protein L7a pseudogene2122443133122443973Rat
1309293Spry1sprouty RTK signaling antagonist 12122484995122490008Rat
402049881LOC134485785translocon-associated protein subunit delta-like2122547243122551045Rat
41101418LOC120101158U6 spliceosomal RNA2122555995122556101Rat
11469315LOC108349999glyceraldehyde-3-phosphate dehydrogenase pseudogene2122570529122574636Rat
1592058Lgals9-ps1galectin 9, pseudogene 12122611781122612838Rat
11513955LOC108350243uncharacterized LOC1083502432122632627122639807Rat
41115179LOC120101292small nucleolar RNA SNORA172122665852122665988Rat
11356258LOC10835000060S ribosomal protein L26 pseudogene2122698050122698500Rat
402291325LOC134485902uncharacterized LOC1344859022122713062122721054Rat
402158723LOC134485615uncharacterized LOC1344856152122771913122777656Rat
1585003Phgdh-ps5phosphoglycerate dehydrogenase, pseudogene 52122838532122845579Rat
402117503LOC134485616uncharacterized LOC1344856162122875867122885709Rat
41183015LOC120101309small nucleolar RNA SNORA172122904248122904378Rat
41045573LOC120100575uncharacterized LOC1201005752123045850123052228Rat
11379162LOC108350184keratin-associated protein 4-4-like2123070677123071453Rat
11373430Rps6-ps3ribosomal protein S6, pseudogene 32123175620123176944Rat
1564378Rpl23al3ribosomal protein L23A like 32123357624123362266Rat
1311665Ankrd50ankyrin repeat domain containing 502123394311123428788Rat
9384455LOC103691533uncharacterized LOC1036915332123505743123534036Rat
41284427LOC120100576uncharacterized LOC1201005762123576181123581504Rat
402282100LOC134485731uncharacterized LOC1344857312123604914123606050Rat
1564291Fat4FAT atypical cadherin 42123855289123984716Rat
1582963Eif4a1-ps6eukaryotic translation initiation factor 4A1, pseudogene 62124253544124254274Rat
1593207Phgdh-ps7phosphoglycerate dehydrogenase, pseudogene 72124296951124298499Rat
402231233LOC134485732uncharacterized LOC1344857322124489455124527570Rat
41143528LOC120101334small nucleolar RNA SNORA172124751002124751131Rat
2322140Nt5c2-ps35'-nucleotidase, cytosolic II, pseudogene 32125184189125185788Rat
9245979LOC103695116serine/arginine-rich splicing factor 3 pseudogene2125299315125299888Rat
7573616LOC102550593uncharacterized LOC1025505932125325878125330078Rat
41325496LOC120100807uncharacterized LOC1201008072125331952125433261Rat
1309446Intuinturned planar cell polarity protein2125528965125613295Rat
2321897Mynn-ps1myoneurin, pseudogene 12125613444125616880Rat
1596195Slc25a31solute carrier family 25 member 312125623331125639155Rat
1306528Hspa4lheat shock protein family A (Hsp70) member 4 like2125668346125726404Rat
1305390Plk4polo-like kinase 42125730480125748894Rat
1310132Mfsd8major facilitator superfamily domain containing 82125749994125784689Rat
41373813Fundc2-ps1FUN14 domain containing 2, pseudogene 12125781015125783306Rat
1563987Abhd18abhydrolase domain containing 182125800488125850167Rat
1359533Fundc2bFUN14 domain containing 2B2125805786125808033Rat
1307509Larp1bLa ribonucleoprotein 1B2125860935125897189Rat
1565989Larp1blLa ribonucleoprotein 1B like2125897805125958607Rat
402275245LOC134485903uncharacterized LOC1344859032125933658125936855Rat
1308804Pgrmc2progesterone receptor membrane component 22125996190126012090Rat
41163150LOC120100809histone H3.v1-like2126137221126143459Rat
41397384LOC120100577uncharacterized LOC1201005772126150916126157429Rat
41242725LOC120100810uncharacterized LOC1201008102126312833126328137Rat
41105572LOC120101226small nucleolar RNA SNORD222126352940126353064Rat
7516893LOC102553773uncharacterized LOC1025537732126385502126396630Rat
1306920Jade1jade family PHD finger 12126471124126524252Rat
628721Sclt1sodium channel and clathrin linker 12126533436126691879Rat
402450976LOC134485904ribosome biogenesis protein NSA2 homolog2126542750126555049Rat
1359508C2h4orf33similar to human chromosome 4 open reading frame 332126692176126769183Rat
41012974LOC12010057840S ribosomal protein S21-like2127282314127282569Rat
40974057LOC120100811uncharacterized LOC1201008112127712143127722558Rat
1563847Kpna1-ps5karyopherin subunit alpha 1, pseudogene 52127821159127823201Rat
1559967Pkm-ps6pyruvate kinase M1/2, pseudogene 62127980600127981866Rat
2321697Spryd7-ps1SPRY domain containing protein 7, pseudogene 12128094053128094600Rat
6486316Hnrnpf-ps1heterogeneous nuclear ribonucleoprotein F, pseudogene 12128543171128554836Rat
1593483Wdr61-ps1WD repeat domain 61, pseudogene 12129379713129380868Rat
2321502Ewsr1-ps1EWS RNA-binding protein 12129924481129926753Rat
1592323Riox2-ps6ribosomal oxygenase 2, pseudogene 62130385359130387095Rat
41091330LOC120100812uncharacterized LOC1201008122130430353130553413Rat
1565811Pcdh10protocadherin 102130553432130619591Rat
2321898Ran-ps3RAN, member RAS oncogene family, pseudogene 32130641949130643744Rat
1593206Aldoa-ps6aldolase, fructose-bisphosphate A, pseudogene 62130677000130678282Rat
1587345Hspa8-ps18heat shock protein family A (Hsp70) member 8, pseudogene 182131045738131047280Rat
41068108LOC120101285small nucleolar RNA SNORA172131514571131514702Rat
1591091Dmtf1-ps1cyclin D binding myb-like transcription factor 1, pseudogene 12131605151131607316Rat
1559517Pabpc4lpoly(A) binding protein, cytoplasmic 4-like2131743939131745929Rat
9191676LOC103691547histone H3-like2131934700131935092Rat
41307398LOC120100579uncharacterized LOC1201005792132346412132347547Rat
41396004LOC120101335small nucleolar RNA SNORA172132600348132600481Rat
41206294LOC120101267small nucleolar RNA SNORA482132716227132716370Rat
7516215Tgap1l12GTPase activating protein testicular GAP1 like 122132884590133581804Rat
1563562Tgap1l11GTPase activating protein testicular GAP1 like 112132965958133026968Rat
9251686Tgap1l3GTPase activating protein testicular GAP1 like 32133063412133125034Rat
1595598Tgap1l8GTPase activating protein testicular GAP1 like 82133153150133215960Rat
402370204LOC134485786Golgi apparatus membrane protein TVP23 homolog B-like2133379651133381011Rat
1589949Tgap1l9GTPase activating protein testicular GAP1 like 92133611140133672231Rat
41164989LOC120101107U2 spliceosomal RNA2133672368133672498Rat
402205789LOC134478921uncharacterized LOC1344789212133686249133735909Rat
1564926Tgap1l6GTPase activating protein testicular GAP1 like 62133748985133798563Rat
402310803LOC134485905uncharacterized LOC1344859052133811634133861329Rat
1589926Phb1-ps17prohibitin 1, pseudogene 172133873883133884231Rat
11465045LOC10835024760S ribosomal protein L35 pseudogene2134333241134333593Rat
9101027Rpl31l11ribosomal protein L31 like 112134333690134334163Rat
1593205Hdac1-ps19Histone deacetylase 1, pseudogene 192134540823134542162Rat
1307595Erhl1ERH, mRNA splicing and mitosis factor like 12134631796134635102Rat
1593204Hspa8-ps8heat shock protein family A (Hsp70) member 8, pseudogene 82135067392135069301Rat
2321698Pacrgl-ps1parkin coregulated like, pseudogene 12135214923135215653Rat
402392312LOC134485906uncharacterized LOC1344859062135315841135338323Rat
7642297LOC102550446rho GTPase-activating protein 20-like2135357947135468865Rat
41233265LOC120100814rho GTPase-activating protein 20-like2135483566135516281Rat
1359174Tgap1l5GTPase activating protein testicular GAP1 like 52135532817135571131Rat
402205599LOC134485907rho GTPase-activating protein 20-like2135623743135662000Rat
40975337LOC120100815rho GTPase-activating protein 20-like2135672517135710751Rat
41092931LOC120093152rho GTPase-activating protein 20-like2135721170135754586Rat
1305870Pcdh18protocadherin 182135982929135996917Rat
2319549Samd3-ps1sterile alpha motif domain containing 3, pseudogene 12136312281136313121Rat
1587573Rpl18a-ps6ribosomal protein L18A, pseudogene 62136477512136480356Rat
2319355Adrm1-ps1ADRM1 26S proteasome ubiquitin receptor, pseudogene 12136484439136485609Rat
1309275Slc7a11solute carrier family 7 member 112136532912136668560Rat
41179476LOC120101127U4 spliceosomal RNA2136679558136679693Rat
40954669LOC120100816uncharacterized LOC1201008162136952575136961793Rat
40977691LOC120101306small nucleolar RNA SNORA172137005212137005331Rat
402320475LOC134485733uncharacterized LOC1344857332137036505137061048Rat
1587344Noctnocturnin2137422074137442282Rat
1310585Elf2E74 like ETS transcription factor 22137445787137536512Rat
11426711Trnap-ugg2transfer RNA proline (anticodon UGG) 22137552025137552096Rat
11486967Trnap-agg4transfer RNA proline (anticodon AGG) 42137553012137553083Rat
1586369Mgarpmitochondria-localized glutamic acid-rich protein2137582152137590294Rat
1586362Ndufc1NADH:ubiquinone oxidoreductase subunit C12137597944137601819Rat
402045086LOC134485908uncharacterized LOC1344859082137604960137608579Rat
1310984Naa15N(alpha)-acetyltransferase 15, NatA auxiliary subunit2137608883137671618Rat
1308353Rab33bRAB33B, member RAS oncogene family2137678953137689581Rat
11385321LOC10835000860S ribosomal protein L35a pseudogene2137682647137683055Rat
1586346Setd7SET domain containing 7, histone lysine methyltransferase2137713545137756319Rat
11392116LOC108350009uncharacterized LOC1083500092137812836137818762Rat
1311218Mgst2microsomal glutathione S-transferase 22137821787137866664Rat
1308177Maml3mastermind-like transcriptional coactivator 32137871267138288615Rat
402118621LOC134485617uncharacterized LOC1344856172138077307138084518Rat
1588275Eif4e-ps3eukaryotic translation initiation factor 4E, pseudogene 32138434482138435760Rat
620283Foxo1forkhead box O12138462974138541420Rat
402015335LOC134485909cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like2138565904138566891Rat
402116755LOC134485910uncharacterized LOC1344859102138833582138839921Rat
7608249LOC102546847uncharacterized LOC1025468472138836061138846074Rat
11483277Trnak-cuu5transfer RNA lysine (anticodon CUU) 52138903853138903925Rat
402024906LOC134485912uncharacterized LOC1344859122138946053138991813Rat
7663391LOC102547111uncharacterized LOC1025471112139093146139178659Rat
402072602LOC134485913uncharacterized LOC1344859132139178177139179377Rat
41372747LOC120100818uncharacterized LOC1201008182139182516139185074Rat
1303283Cog6component of oligomeric golgi complex 62139212459139249505Rat
1560177Lhfpl6LHFPL tetraspan subfamily member 62139276810139474740Rat
41343568LOC120100819uncharacterized LOC1201008192139333966139438978Rat
402429796LOC134485911uncharacterized LOC1344859112139498362139521614Rat
11386619LOC10835018760S ribosomal protein L39 pseudogene2139571532139571726Rat
1565414Nhlrc3NHL repeat containing 32139678127139692423Rat
7631535Nhp2-ps1NHP2 ribonucleoprotein, pseudogene 12139681625139684875Rat
1309403Proser1proline and serine rich 12139692662139712048Rat
1311090Stoml3stomatin like 32139722970139732675Rat
40999832LOC120101356small nucleolar RNA SNORA172139748874139748990Rat
1566012Frem2FRAS1 related extracellular matrix 22139753055139891046Rat
2318910C1h15orf40-ps1similar to human chromosome 15 open reading frame 40, pseudogene 12139926099139927108Rat
1588592Prdx1-ps8peroxiredoxin 1, pseudogene 82139976512139977173Rat
1304890Ufm1ubiquitin-fold modifier 12140119722140127866Rat
7623948LOC102549721uncharacterized LOC1025497212140332524140382690Rat
621276Trpc4transient receptor potential cation channel, subfamily C, member 42140457841140629556Rat
402031872LOC134485914uncharacterized LOC1344859142140539326140544850Rat
1305285Postnperiostin2140677774140709304Rat
1590821Dusp14l1dual specificity phosphatase 14-like 12140888312140889655Rat
1564472Rexo1l1-ps1REX1, RNA exonuclease 1 homolog-like 1, pseudogene 12140984220140987546Rat
40952217Trnaa-agc74transfer RNA alanine (anticodon AGC) 742140990998140991072Rat
40964986Trnaa-ggctransfer RNA alanine (anticodon GGC)2141016821141016901Rat
1307812Supt20hSPT20 homolog, SAGA complex component2141047479141080656Rat
1306169Exosc8exosome component 82141080568141087112Rat
1308900Alg5ALG5, dolichyl-phosphate beta-glucosyltransferase2141087126141101397Rat
71004Smad9SMAD family member 92141106668141156477Rat
40992880LOC120100820uncharacterized LOC1201008202141141545141150101Rat
1565351Rfxapregulatory factor X-associated protein2141158214141162397Rat
402061221LOC134485734uncharacterized LOC1344857342141183642141196427Rat
1597355Sertm1serine-rich and transmembrane domain containing 12141237054141256669Rat
402030659LOC134485915uncharacterized LOC1344859152141263916141265760Rat
402453255LOC134485735uncharacterized LOC1344857352141369425141374158Rat
1310639Ccna1cyclin A12141383352141428205Rat
402450394LOC134485736uncharacterized LOC1344857362141430941141434992Rat
402018953LOC134485916uncharacterized LOC1344859162141438717141442878Rat
1305900Spartspartin2141442770141469388Rat
1593170Ccdc169coiled-coil domain containing 1692141471762141501325Rat
1589577Sohlh2spermatogenesis and oogenesis specific basic helix-loop-helix 22141512410141534864Rat
41398125LOC120101148U6 spliceosomal RNA2141528528141528634Rat
68437Dclk1doublecortin-like kinase 12141567215141861088Rat
402396263LOC134485918uncharacterized LOC1344859182141597557141599734Rat
7581938LOC102552324uncharacterized LOC1025523242141716632141730860Rat
402088247LOC134485917uncharacterized LOC1344859172141730860141763322Rat
402132438LOC134485618uncharacterized LOC1344856182141900246141916138Rat
1562629Nbeaneurobeachin2141930147142489172Rat
402272623LOC134485619uncharacterized LOC1344856192141965823141971419Rat
7726710LOC102552834uncharacterized LOC1025528342142056492142065322Rat
1589984Mab21l1mab-21 like 12142093618142096007Rat
7664166LOC102552778uncharacterized LOC1025527782142141003142144818Rat
41237368LOC120101340small nucleolar RNA SNORA172142461411142461538Rat
41022771LOC120101343small nucleolar RNA SNORA172142767312142767427Rat
1560498Eif3i-ps1eukaryotic translation initiation factor 3, subunit I, pseudogene 12142819337142820368Rat
7507353Nsa2-ps23NSA2 ribosome biogenesis factor, pseudogene 232142931071142931919Rat
41145339LOC120100824uncharacterized LOC1201008242142985597143023766Rat
1309652Tm4sf1transmembrane 4 L six family member 12143606980143616176Rat
402379685LOC134485620uncharacterized LOC1344856202143631907143652931Rat
1563943Mcm4-ps1minichromosome maintenance complex component 4, pseudogene 12143696340143704646Rat
41329676LOC120101218U7 small nuclear RNA2143712905143712968Rat
621784Tm4sf4transmembrane 4 L six family member 42143720220143771283Rat
1559609Wwtr1WW domain containing transcription regulator 12143801181143916941Rat
6503572Rpl12-ps2ribosomal protein L12, pseudogene 22143934401144786878Rat
1588810Commd2COMM domain containing 22143998672144002918Rat
11368573LOC108350015uncharacterized LOC1083500152144002942144015979Rat
2320491Ankub1ankyrin repeat and ubiquitin domain containing 12144005876144044635Rat
1566235Rpl36al-ps1ribosomal protein L36A, pseudogene 12144042717144043112Rat
1594062Rnf13ring finger protein 132144076526144211520Rat
40964933Trnap-agg40transfer RNA proline (anticodon AGG) 402144163656144163737Rat
9269847LOC10369511960S ribosomal protein L34 pseudogene2144176131144180995Rat
621826Pfn2profilin 22144217100144222936Rat
40936546LOC120100826uncharacterized LOC1201008262144259620144274753Rat
6500885Nono-ps2non-POU domain containing, octamer-binding, pseudogene 22144259621144261709Rat
41156453LOC120100828uncharacterized LOC1201008282144326627144339541Rat
6501036Kmt5al1lysine methyltransferase 5A like 12144439657144441462Rat
40946467LOC120100827uncharacterized LOC1201008272144505364144563222Rat
41392418LOC120101116U2 spliceosomal RNA2144655302144655381Rat
2320352Rps13-ps8ribosomal protein S13, pseudogene 82144786510144786883Rat
1593169Tsc22d2TSC22 domain family, member 22144796760144847930Rat
620790Serp1stress-associated endoplasmic reticulum protein 12144907204144911187Rat
1589591Eif2aeukaryotic translation initiation factor 2A2144911247144944705Rat
1359128Selenotselenoprotein T2144954324144971375Rat
1559451Erich6glutamate-rich 62145001833145027935Rat
620778Siah2siah E3 ubiquitin protein ligase 22145063847145081675Rat
402239089LOC134485621uncharacterized LOC1344856212145074000145079488Rat
11362385Mindy4bMINDY family member 4B2145175510145208165Rat
628779Clrn1clarin 12145233941145280855Rat
11380114Rpl7a-ps21ribosomal protein L7a, pseudogene 212145292346145292779Rat
402422725LOC134485737uncharacterized LOC1344857372145358040145360187Rat
1592212Med12lmediator complex subunit 12L2145403318145726317Rat
1585271Gpr171G protein-coupled receptor 1712145510305145515392Rat
41379557LOC120100831uncharacterized LOC1201008312145515462145520650Rat
70912P2ry14purinergic receptor P2Y142145522598145563074Rat
1307852Gpr87G protein-coupled receptor 872145589630145608094Rat
1302941P2ry13purinergic receptor P2Y132145620321145624730Rat
621681P2ry12purinergic receptor P2Y122145631487145673194Rat
735030Igsf10immunoglobulin superfamily, member 102145725868145754850Rat
1559622Aadacl2larylacetamide deacetylase-like 2 like2145910400145950303Rat
9158000LOC103691561activated RNA polymerase II transcriptional coactivator p15 pseudogene2145936535145937181Rat
1561998Aadacl2fm2AADACL2 family member 22146033047146061074Rat
1560324Aadacl2fm3AADACL2 family member 32146086384146125291Rat
41146639Aadacl2fm3l1AADACL2 family member 3 like 12146150579146196927Rat
1560162Aadacl2fm2l1AADACL2 family member 2 like 12146227615146249540Rat
402148808LOC134485919uncharacterized LOC1344859192146267156146284934Rat
1563197Aadacl2arylacetamide deacetylase-like 22146273344146293953Rat
631440Aadacarylacetamide deacetylase2146293449146351061Rat
402289691LOC134485920uncharacterized LOC1344859202146361661146371077Rat
1303193Sucnr1succinate receptor 12146368858146380360Rat
7736144LOC102551458uncharacterized LOC1025514582146399200146409614Rat
41184903Rnu6-173RNA, U6 small nuclear 1732146584982146585087Rat
41253353Tgif1-ps1TGFB-induced factor homeobox 1, pseudogene 12146647495146680190Rat
402043228LOC134485921uncharacterized LOC1344859212146698143146738743Rat
41216218LOC120100832uncharacterized LOC1201008322146738903146751840Rat
41024370LOC120101133U4 spliceosomal RNA2146742956146743078Rat
1592032Ftl1l4ferritin light chain 1 like 42146762350146763451Rat
628668Mbnl1muscleblind-like splicing regulator 12146789570146964136Rat
41272099LOC120100833protein FAM246C-like2146817449146820550Rat
41379567Zmynd8-ps1zinc finger, MYND-type containing 8, pseudogene 12146982085146984362Rat
1590976Mterf1-ps3mitochondrial transcription termination factor 1, pseudogene 32147062234147065022Rat
3242P2ry1purinergic receptor P2Y12147391661147397870Rat
2318158Srsf10-ps2serine and arginine rich splicing factor 10, pseudogene 22147696750147697455Rat
620591Rap2bRAP2B, member of RAS oncogene family2147749387147749938Rat
41350546Trnas-aga30transfer RNA serine (anticodon AGA) 302147940853147940934Rat
11451529LOC108350188heterogeneous nuclear ribonucleoprotein A1 pseudogene2148353021148354074Rat
1589858Pbk-ps1PDZ binding kinase, pseudogene 12148572276148573434Rat
6494152Hspd1-ps34heat shock protein family D (Hsp60) member 1, pseudogene 342148574295148576254Rat
402085654LOC134485787dedicator of cytokinesis protein 2-like2148771757148773014Rat
41153850LOC120101261small nucleolar RNA SNORA482148853584148853727Rat
1562559Arhgef26Rho guanine nucleotide exchange factor 262148889405149000538Rat
402122835LOC134485922uncharacterized LOC1344859222148967440148978210Rat
1308767Dhx36DEAH-box helicase 362149006089149044192Rat
41162710LOC120100834uncharacterized LOC1201008342149044088149122668Rat
619890Gpr149G protein-coupled receptor 1492149059333149130798Rat
41368909Rnu6-1286RNA, U6 small nuclear 12862149387883149387985Rat
402253983LOC134485788uncharacterized LOC1344857882149444847149446582Rat
41144049Scarna14l3small Cajal body-specific RNA 14 like 32149744183149744317Rat
3098Mmemembrane metallo-endopeptidase2149806826149957381Rat
1592031Eif5-ps3eukaryotic translation initiation factor 5, pseudogene 32149823466149824691Rat
40939051LOC120101244small nucleolar RNA SNORA282149825250149825375Rat
1560703Tmed2l1transmembrane p24 trafficking protein 2 like 12149959930149978235Rat
402102591LOC134485738large ribosomal subunit protein eL39-like2150080640150082144Rat
7663730Strit1small transmembrane regulator of ion transport 12150084857150087721Rat
41219350LOC120101207U6 spliceosomal RNA2150091175150091281Rat
2323965Fis1-ps1fission, mitochondrial 1, pseudogene 12150113280150126281Rat
1561991Plch1phospholipase C, eta 12150298547150514120Rat
1565059C2h3orf33similar to human chromosome 3 open reading frame 332150522758150554007Rat
620653Slc33a1solute carrier family 33 member 12150565327150587700Rat
1310063Gmpsguanine monophosphate synthase2150587824150641564Rat
708515Vom2r44vomeronasal 2 receptor 442150643126150685691Rat
1306812Vom2r45vomeronasal 2 receptor, 452150720434150747130Rat
735122Vom2r46vomeronasal 2 receptor, 462150777882150817036Rat
41282001LOC120101015vomeronasal type-2 receptor 1-like2150817858150883834Rat
7675313Spin1-ps3spindlin 1, pseudogene 32150873735150876014Rat
41300872LOC120100835vomeronasal type-2 receptor 1-like2150903269150934759Rat
41026717Vom2r1-ps1vomeronasal 2 receptor 1, pseudogene 12150993652150999413Rat
402247878LOC134478905uncharacterized LOC1344789052151022660151114155Rat
1588660Tgap1l10GTPase activating protein testicular GAP1 like 102151124984151219795Rat
1626029LOC691049hypothetical protein LOC6910492151256824151257366Rat
1559813Vom2r47vomeronasal 2 receptor, 472151264660151300407Rat
41191904LOC120101227small nucleolar RNA SNORD222151313128151313256Rat
40966232LOC120101228small nucleolar RNA SNORD222151335788151335916Rat
41345252LOC120101314small nucleolar RNA SNORA172151384646151384776Rat
41361295LOC120101291small nucleolar RNA SNORA172151397853151397983Rat
1625999Vom2r-ps74vomeronasal 2 receptor, pseudogene 742151401433151402325Rat
61827Kcnab1potassium voltage-gated channel subfamily A regulatory beta subunit 12151446975151913636Rat
41050432LOC120101165U6 spliceosomal RNA2151709700151709802Rat
402443698LOC134485622uncharacterized LOC1344856222151848074151860611Rat
41042241LOC120100836uncharacterized LOC1201008362151860873151889494Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10903D2Mco323242149905089149905413Ratregion
10904D2Mco332442149902428149902672Ratregion
33983D2Mit233022143746578143746880Ratregion
34005D2Mit81582145807215145807373Ratregion
34114D2Mgh151562143344967143345123Ratregion
33743D2Mit91122148810189148810301Ratregion
37330D2Rat1811972150627832150628029Ratregion
35222D2Rat3021632124774238124774401Ratregion
37034D2Rat371322147649699147649831Ratregion
37146D2Rat792022122886093122886295Ratregion
37768D2Rat1661382142786082142786220Ratregion
36466D2Rat341852139067258139067443Ratregion
36701D2Rat1461572146686357146686514Ratregion
36775D2Rat351602146378221146378381Ratregion
35162D2Rat381652151869660151869825Ratregion
35857D2Rat361312145306936145307067Ratregion
39616D2Rat2562242142547899142548123Ratregion
39754D2Rat2232312150226039150226270Ratregion
39842D2Rat224952150107915150108010Ratregion
38256D2Rat1152292132859429132859658Ratregion
38312D2Rat1791832151556299151556482Ratregion
42289D2Rat3731192142321519142321638Ratregion
41152D2Rat2201462139304499139304645Ratregion
41184D2Rat2191722134144461134144633Ratregion
41300D2Rat2211592142839476142839635Ratregion
41358D2Rat2171392120039407120039546Ratregion
41484D2Rat2181142122274224122274338Ratregion
42597D2Rat3402132121439886121440099Ratregion
40780D2Rat2222202142403818142404038Ratregion
41128D2Rat2252502147346126147346376Ratregion
41834D2Rat3741992151716745151716944Ratregion
41838D2Rat3722452123109609123109854Ratregion
43531D2Got892022133439300133439502Ratregion
60798D2Wox91422138595962138596104Ratregion
60339D2Got751452120696748120696893Ratregion
60355D2Got932432137969690137969933Ratregion
60359D2Got982942138700783138701077Ratregion
66367D2Mco381912147646420147646611Ratregion
66648D2Mco102472136037680136037927Ratregion
67258D2Arb92692144859100144859369Ratregion
67751D2Uwm322072145059541145059748Ratregion
67785D2Uwm91492137941815137941964Ratregion
67802D2Uwm191422136187288136187430Ratregion
67803D2Uwm201262125159140125159266Ratregion
1630697D2Got3292012122599305122599506Ratregion
1639538D2Wox433362149905086149905422Ratregion
1639722D2Got4322882140705678140705966Ratregion
1640406D2Got4171372125268222125268359Ratregion
1637487D2Got1052902149698784149699074Ratregion
5028771RH1422687562137865782137866538Ratregion
5031754AU0472622302151559940151560170Ratregion
5029181RH1438226162125875846125876462Ratregion
5026930RH1340801922145744573145744765Ratregion
5026982RH1342751862137689167137689353Ratregion
5028414AI3035722822149000085149000367Ratregion
5056921RH1446571762144937303144937479Ratregion
5053319RH1425794522120729065120729517Ratregion
5046290RH1316672272143699838143700065Ratregion
5048138RH1327301832144944207144944390Ratregion
5043140RH1298559492141100017141100966Ratregion
5076426RH1391681792145595306145595485Ratregion
5073540RH1374951922146826585146826777Ratregion
5073100RH1372378532120727478120728331Ratregion
5072238RH1367331192122350335122350454Ratregion
5068890AU0468612712126457394126457665Ratregion
5068978AU0468052982139370112139370410Ratregion
5070540RH1345608062121355734121356540Ratregion
5062820AW5283392402141237097141237337Ratregion
5086161AA9976331102140709031140709141Ratregion
5090781AU0499592962123586903123587199Ratregion
5084292AA8501001702121354765121354935Ratregion
5083123BF3908091922145621575145621767Ratregion
5085189AW5340152152126522116126522331Ratregion
5500517RH1358405912144001407144001998Ratregion
Position Markers

Flank 1: (D2Rat217)
Rat AssemblyChrPosition (strand)Source
GRCr82120,039,407 - 120,039,546 (+)Marker Load Pipeline
mRatBN7.22118,111,229 - 118,111,368 (+)MAPPER
Rnor_6.02121,750,419 - 121,750,557NCBI
Rnor_5.02141,390,480 - 141,390,618UniSTS
RGSC_v3.42121,545,310 - 121,545,449RGD
RGSC_v3.42121,545,311 - 121,545,449UniSTS
RGSC_v3.12121,490,272 - 121,490,411RGD
Celera2113,142,302 - 113,142,440UniSTS
SHRSP x BN Map243.3798RGD
SHRSP x BN Map243.3798UniSTS
Flank 2: (D2Rat38)
Rat AssemblyChrPosition (strand)Source
GRCr82151,869,660 - 151,869,825 (+)Marker Load Pipeline
mRatBN7.22149,559,561 - 149,559,726 (+)MAPPER
Rnor_6.02155,965,557 - 155,965,721NCBI
Rnor_5.02175,354,307 - 175,354,471UniSTS
RGSC_v3.42155,101,972 - 155,102,371RGD
RGSC_v3.42155,102,058 - 155,102,222UniSTS
RGSC_v3.12155,052,021 - 155,052,185RGD
Celera2143,979,588 - 143,979,752UniSTS
RH 3.4 Map2972.8RGD
RH 3.4 Map2972.8UniSTS
RH 2.0 Map2698.5RGD
SHRSP x BN Map260.5198RGD
FHH x ACI Map267.7299RGD
Cytogenetic Map2q31UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)2105628029150628029Rat
631566Bp90Blood pressure QTL 900.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2149957381221199885Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)282947902127947902Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845370229470703Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)284056790132859658Rat
1358360Sradr2Stress Responsive Adrenal Weight QTL 210.24adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)2124103798154505346Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283465462229820014Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2138595962205135428Rat
1581576Pur7Proteinuria QTL 70.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)280396178220931218Rat
1581578Cm49Cardiac mass QTL 494.90.01heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2145807215220931416Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278269809208420281Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2122597372215234002Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)227148328145807373Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)280396178220931218Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2145807215190807215Rat
10043139Iddm55Insulin dependent diabetes mellitus QTL 553.10.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2150313808195313808Rat
2317886Alcrsp23Alcohol response QTL 232.40.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)295142371140142371Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)278269809123269809Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2143565208188565208Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24265106205135428Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2139067258192287892Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1582257Gluco21Glucose level QTL 213.10.0035blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2120039407159440891Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
2301966Bp322Blood pressure QTL 3223.58arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2144882354205135428Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2100807373145807373Rat
8662836Vetf8Vascular elastic tissue fragility QTL 80.66thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2106869825151869825Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845182205135428Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283400752223709938Rat
5135226Leukc2Leukocyte quantity QTL 2eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)2120039407151869825Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)228652666139067443Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)293602631145807373Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2139067258184067258Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2151869660251712708Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)280396034220931416Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278269809205135428Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2143344967251712708Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2143746578205135428Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2143344967251712708Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2114384617215381366Rat
1598805Memor8Memory QTL 83exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2150096616195096616Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)282214549127214549Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
724568Uae13Urinary albumin excretion QTL 134.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)2145306936212705578Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2113746222205135428Rat
7488933Bp368Blood pressure QTL 3680.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2104957381149957381Rat
61401Niddm2Non-insulin dependent diabetes mellitus QTL 24.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2147287892192287892Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2114384617215381366Rat
738007Anxrr7Anxiety related response QTL 74.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2120339555165339555Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2151869660223841096Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2117415288205135428Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979159440891Rat
1581552Pur12Proteinuria QTL 125.190.0009urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)2114032149150226270Rat
631520Bp73Blood pressure QTL 730.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2149806826170653323Rat
1598833Bp295Blood pressure QTL 2953.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150096616195096616Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283465462225110681Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)2114440891159440891Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)247856345205135428Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979184731399Rat
1354594Despr10Despair related QTL 102e-06locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2116804572161804572Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)276328396209350714Rat
6903312Bw112Body weight QTL 1123.20.0013body mass (VT:0001259)body weight (CMO:0000012)2145807215173074435Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)261051541143746880Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general explains 5% of the total variance with an additive effect of 83.4 by the MES allele 5135221
qtl_general software used: Map Manager QTXb20 5135221
qtl_general lineage: 7 eosinophilic male rats from F9 and F10 generation were backcrossed to MES/Slc 5135221
qtl_general measurement method: blood samples were collected from the jugular vein of 12 weeks old rats anesthetized with ether; number of leukocytes was counted by an automated cell counter and differential leukocyte counts (%) were determined on blood film stained with Wright's stain 5135221
qtl_general number of animals used: 328 backcross rats 5135221
qtl_statistics LRS: 7.1 5135221