Gene: Slc33a1 (solute carrier family 33 member 1) Rattus norvegicus
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Symbol: Slc33a1
Name: solute carrier family 33 member 1
Description: Predicted to have solute:proton symporter activity. Predicted to be involved in BMP signaling pathway and SMAD protein signal transduction. Predicted to localize to the endoplasmic reticulum membrane and integral component of membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 42. Orthologous to human SLC33A1 (solute carrier family 33 member 1); PARTICIPATES IN ganglioside metabolic pathway; INTERACTS WITH 2,4-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Acatn; acetyl-CoA transporter; acetyl-CoA transporter 1; acetyl-coenzyme A transporter 1; acetyl-coenzyme A transporter 1-like; AT-1; solute carrier family 33 (acetyl-CoA transporter), member 1
Orthologs:
Homo sapiens (human) : SLC33A1 (solute carrier family 33 member 1)  HGNC  Alliance
Mus musculus (house mouse) : Slc33a1 (solute carrier family 33 (acetyl-CoA transporter), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc33a1 (solute carrier family 33 member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC33A1 (solute carrier family 33 member 1)
Canis lupus familiaris (dog) : SLC33A1 (solute carrier family 33 member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc33a1 (solute carrier family 33 member 1)
Sus scrofa (pig) : SLC33A1 (solute carrier family 33 member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02154,520,170 - 154,542,981 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02173,904,052 - 173,926,434 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42153,768,885 - 153,791,102 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12153,718,848 - 153,741,065 (-)NCBI
Celera2142,691,385 - 142,713,443 (-)NCBICelera
Cytogenetic Map2q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc33a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620653
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.